rn6_v1_chr3_+_35014538_35014538	48.6373	Sox6_Sox9	ENSRNOT00000006341|Kif5c|ENSRNOG00000004680|kinesin family member 5C [Source:RGD Symbol%3BAcc:1308539]
rn6_v1_chr18_+_79406381_79406381	47.8567	Sox6_Sox9	ENSRNOT00000022303|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]	ENSRNOT00000058295|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]	ENSRNOT00000058296|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]	ENSRNOT00000022280|Mbp|ENSRNOG00000016516|myelin basic protein [Source:RGD Symbol%3BAcc:3054]
rn6_v1_chr4_-_39102807_39102807	44.1071	Sox6_Sox9	ENSRNOT00000052063|Thsd7a|ENSRNOG00000030151|thrombospondin type 1 domain containing 7A [Source:RGD Symbol%3BAcc:1566201]
rn6_v1_chr5_+_64326733_64326733	34.9975	Sox6_Sox9	ENSRNOT00000065775|Tmeff1|ENSRNOG00000008034|transmembrane protein with EGF-like and two follistatin-like domains 1 [Source:RGD Symbol%3BAcc:62005]
rn6_v1_chr8_+_128824508_128824508	34.1228	Sox6_Sox9	ENSRNOT00000025343|Mobp|ENSRNOG00000018700|myelin-associated oligodendrocyte basic protein [Source:RGD Symbol%3BAcc:3101]
rn6_v1_chr6_+_147876237_147876237	32.4683	Sox6_Sox9	ENSRNOT00000056649|Tmem196|ENSRNOG00000037435|transmembrane protein 196 [Source:RGD Symbol%3BAcc:1562527]
rn6_v1_chr3_+_92640752_92640752	32.002	Sox6_Sox9	ENSRNOT00000007604|Slc1a2|ENSRNOG00000005479|solute carrier family 1 member 2 [Source:RGD Symbol%3BAcc:3697]
rn6_v1_chr6_+_147876557_147876557	30.1526	Sox6_Sox9	ENSRNOT00000080090|Tmem196|ENSRNOG00000037435|transmembrane protein 196 [Source:RGD Symbol%3BAcc:1562527]
rn6_v1_chr9_-_100253609_100253609	25.6062	Sox6_Sox9	ENSRNOT00000036061|Kif1a|ENSRNOG00000023993|kinesin family member 1A [Source:RGD Symbol%3BAcc:1304996]
rn6_v1_chr18_+_30562178_30562178	24.457	Sox6_Sox9	ENSRNOT00000040998|LOC108348771|ENSRNOG00000039471|protocadherin beta-16-like [Source:RGD Symbol%3BAcc:11492646]
rn6_v1_chr7_-_136853957_136853957	21.1717	Sox6_Sox9	ENSRNOT00000008985|Nell2|ENSRNOG00000006235|neural EGFL like 2 [Source:RGD Symbol%3BAcc:620999]
rn6_v1_chr15_+_43007908_43007908	20.195	Sox6_Sox9	ENSRNOT00000084753|Stmn4|ENSRNOG00000053334|stathmin 4 [Source:RGD Symbol%3BAcc:69349]	ENSRNOT00000091567|Stmn4|ENSRNOG00000053334|stathmin 4 [Source:RGD Symbol%3BAcc:69349]	ENSRNOT00000087709|Stmn4|ENSRNOG00000053334|stathmin 4 [Source:RGD Symbol%3BAcc:69349]
rn6_v1_chr18_+_30023828_30023828	20.1399	Sox6_Sox9	ENSRNOT00000079008|Pcdha4|ENSRNOG00000020119|protocadherin alpha 4 [Source:RGD Symbol%3BAcc:620337]
rn6_v1_chr3_-_10602672_10602672	19.7937	Sox6_Sox9	ENSRNOT00000011648|Ncs1|ENSRNOG00000008761|neuronal calcium sensor 1 [Source:RGD Symbol%3BAcc:68417]
rn6_v1_chr3_-_168018410_168018410	19.7529	Sox6_Sox9	ENSRNOT00000087579|Bcas1|ENSRNOG00000012906|breast carcinoma amplified sequence 1 [Source:RGD Symbol%3BAcc:628644]
rn6_v1_chr10_+_3411380_3411380	19.6087	Sox6_Sox9	ENSRNOT00000004346|RGD1305733|ENSRNOG00000003198|similar to RIKEN cDNA 2900011O08 [Source:RGD Symbol%3BAcc:1305733]
rn6_v1_chr3_+_48082935_48082968	18.8194	Sox6_Sox9	ENSRNOT00000087711|Slc4a10|ENSRNOG00000005307|solute carrier family 4 member 10 [Source:RGD Symbol%3BAcc:631407]	ENSRNOT00000067545|Slc4a10|ENSRNOG00000005307|solute carrier family 4 member 10 [Source:RGD Symbol%3BAcc:631407]
rn6_v1_chr20_+_10123651_10123651	17.2555	Sox6_Sox9	ENSRNOT00000001559|Pde9a|ENSRNOG00000001174|phosphodiesterase 9A [Source:RGD Symbol%3BAcc:621035]
rn6_v1_chr2_+_17616401_17616401	17.0409	Sox6_Sox9	ENSRNOT00000064991|Edil3|ENSRNOG00000033064|EGF like repeats and discoidin domains 3 [Source:RGD Symbol%3BAcc:1588887]
rn6_v1_chr2_+_58448917_58448917	15.6201	Sox6_Sox9	ENSRNOT00000082562|Ranbp3l|ENSRNOG00000052173|RAN binding protein 3-like [Source:RGD Symbol%3BAcc:1307559]
rn6_v1_chr10_-_45534570_45534570	15.6079	Sox6_Sox9	ENSRNOT00000058362|Gjc2|ENSRNOG00000038328|gap junction protein%2C gamma 2 [Source:RGD Symbol%3BAcc:1562712]
rn6_v1_chr7_-_136853154_136853154	15.4871	Sox6_Sox9	ENSRNOT00000087376|Nell2|ENSRNOG00000006235|neural EGFL like 2 [Source:RGD Symbol%3BAcc:620999]
rn6_v1_chr18_+_30574627_30574627	15.3607	Sox6_Sox9	ENSRNOT00000060484|Pcdhb19|ENSRNOG00000039469|protocadherin beta 19 [Source:RGD Symbol%3BAcc:1549697]
rn6_v1_chr4_-_11610518_11610518	15.1746	Sox6_Sox9	ENSRNOT00000066643|Magi2|ENSRNOG00000013962|membrane associated guanylate kinase%2C WW and PDZ domain containing 2 [Source:RGD Symbol%3BAcc:621855]
rn6_v1_chr5_+_152680407_152680407	15.0487	Sox6_Sox9	ENSRNOT00000076864|Stmn1|ENSRNOG00000016810|stathmin 1 [Source:RGD Symbol%3BAcc:2992]
rn6_v1_chr11_+_74834050_74834050	14.9515	Sox6_Sox9	ENSRNOT00000002333|Atp13a4|ENSRNOG00000001714|ATPase 13A4 [Source:RGD Symbol%3BAcc:1306927]
rn6_v1_chr18_+_30387937_30387937	14.2879	Sox6_Sox9	ENSRNOT00000027210|Pcdhb4|ENSRNOG00000027469|protocadherin beta 4 [Source:RGD Symbol%3BAcc:1308912]
rn6_v1_chr8_-_82533689_82533689	14.2472	Sox6_Sox9	ENSRNOT00000014124|Tmod2|ENSRNOG00000010447|tropomodulin 2 [Source:RGD Symbol%3BAcc:61948]
rn6_v1_chr3_-_104504204_104504204	13.9368	Sox6_Sox9	ENSRNOT00000049582|Ryr3|ENSRNOG00000006645|ryanodine receptor 3 [Source:RGD Symbol%3BAcc:68952]
rn6_v1_chr3_-_104502471_104502471	13.6925	Sox6_Sox9	ENSRNOT00000040306|Ryr3|ENSRNOG00000006645|ryanodine receptor 3 [Source:RGD Symbol%3BAcc:68952]
rn6_v1_chr18_+_30826260_30826260	13.3073	Sox6_Sox9	ENSRNOT00000065235|Pcdhgb1|ENSRNOG00000042264|protocadherin gamma subfamily B%2C 1 [Source:MGI Symbol%3BAcc:MGI:1935169]
rn6_v1_chr18_+_30435119_30435119	13.1951	Sox6_Sox9	ENSRNOT00000027190|Pcdhb8|ENSRNOG00000020073|protocadherin beta 8 [Source:RGD Symbol%3BAcc:1309895]
rn6_v1_chr2_-_187401786_187401786	13.0857	Sox6_Sox9	ENSRNOT00000025624|Hapln2|ENSRNOG00000018870|hyaluronan and proteoglycan link protein 2 [Source:RGD Symbol%3BAcc:621854]
rn6_v1_chr16_+_56247659_56247659	12.8294	Sox6_Sox9	ENSRNOT00000017452|Tusc3|ENSRNOG00000013061|tumor suppressor candidate 3 [Source:RGD Symbol%3BAcc:1303318]
rn6_v1_chr10_+_82823918_82823918	12.7174	Sox6_Sox9	ENSRNOT00000005519|Samd14|ENSRNOG00000004155|sterile alpha motif domain containing 14 [Source:RGD Symbol%3BAcc:1306138]
rn6_v1_chr18_+_15467870_15467870	12.5366	Sox6_Sox9	ENSRNOT00000091696|B4galt6|ENSRNOG00000015895|beta-1%2C4-galactosyltransferase 6 [Source:RGD Symbol%3BAcc:71046]
rn6_v1_chr4_-_108008484_108008484	12.5157	Sox6_Sox9	ENSRNOT00000007971|Ctnna2|ENSRNOG00000006003|catenin alpha 2 [Source:RGD Symbol%3BAcc:1305060]
rn6_v1_chr4_+_84423653_84423653	12.4639	Sox6_Sox9	ENSRNOT00000012655|Chn2|ENSRNOG00000009411|chimerin 2 [Source:RGD Symbol%3BAcc:620140]
rn6_v1_chr14_-_84106997_84106997	12.296	Sox6_Sox9	ENSRNOT00000065501|Osbp2|ENSRNOG00000019645|oxysterol binding protein 2 [Source:RGD Symbol%3BAcc:1310505]
rn6_v1_chr9_+_6966908_6966908	12.2107	Sox6_Sox9	ENSRNOT00000072796|St6gal2|ENSRNOG00000046515|ST6 beta-galactoside alpha-2%2C6-sialyltransferase 2 [Source:RGD Symbol%3BAcc:1559663]
rn6_v1_chr14_+_71542057_71542208	12.1614	Sox6_Sox9	ENSRNOT00000082592|Prom1|ENSRNOG00000003098|prominin 1 [Source:RGD Symbol%3BAcc:69367]	ENSRNOT00000083701|Prom1|ENSRNOG00000003098|prominin 1 [Source:RGD Symbol%3BAcc:69367]	ENSRNOT00000084322|Prom1|ENSRNOG00000003098|prominin 1 [Source:RGD Symbol%3BAcc:69367]
rn6_v1_chr8_+_113105814_113105814	12.0729	Sox6_Sox9	ENSRNOT00000016749|Cpne4|ENSRNOG00000026577|copine 4 [Source:RGD Symbol%3BAcc:1308844]
rn6_v1_chr6_+_110624856_110624856	11.8427	Sox6_Sox9	ENSRNOT00000014017|Vash1|ENSRNOG00000010457|vasohibin 1 [Source:RGD Symbol%3BAcc:1564082]
rn6_v1_chr18_+_30550877_30550877	11.7044	Sox6_Sox9	ENSRNOT00000027164|LOC108348201|ENSRNOG00000020054|protocadherin beta-7-like [Source:RGD Symbol%3BAcc:11368541]
rn6_v1_chr1_+_142679345_142679345	11.6152	Sox6_Sox9	ENSRNOT00000034267|Zscan2|ENSRNOG00000022164|zinc finger and SCAN domain containing 2 [Source:RGD Symbol%3BAcc:1584548]
rn6_v1_chr1_+_177093387_177093387	11.5355	Sox6_Sox9	ENSRNOT00000021858|Mical2|ENSRNOG00000016244|microtubule associated monooxygenase%2C calponin and LIM domain containing 2 [Source:RGD Symbol%3BAcc:1311773]
rn6_v1_chr12_+_2534212_2534212	11.0772	Sox6_Sox9	ENSRNOT00000001399|Ctxn1|ENSRNOG00000001057|cortexin 1 [Source:RGD Symbol%3BAcc:2449]
rn6_v1_chr3_+_11114551_11114551	11.0481	Sox6_Sox9	ENSRNOT00000013507|Plpp7|ENSRNOG00000010068|phospholipid phosphatase 7 [Source:RGD Symbol%3BAcc:1305821]
rn6_v1_chrX_+_70596576_70596580	10.8623	Sox6_Sox9	ENSRNOT00000045082|Dlg3|ENSRNOG00000002767|discs large MAGUK scaffold protein 3 [Source:RGD Symbol%3BAcc:68423]	ENSRNOT00000003741|Dlg3|ENSRNOG00000002767|discs large MAGUK scaffold protein 3 [Source:RGD Symbol%3BAcc:68423]	ENSRNOT00000076079|Dlg3|ENSRNOG00000002767|discs large MAGUK scaffold protein 3 [Source:RGD Symbol%3BAcc:68423]
rn6_v1_chr13_-_111581018_111581019	10.8251	Sox6_Sox9	ENSRNOT00000083072|Sertad4|ENSRNOG00000060773|SERTA domain containing 4 [Source:RGD Symbol%3BAcc:1565408]	ENSRNOT00000077981|Sertad4|ENSRNOG00000060773|SERTA domain containing 4 [Source:RGD Symbol%3BAcc:1565408]
rn6_v1_chr13_+_113692131_113692131	10.6866	Sox6_Sox9	ENSRNOT00000057160|Cd34|ENSRNOG00000045558|CD34 molecule [Source:RGD Symbol%3BAcc:1306863]
rn6_v1_chr7_-_134722215_134722215	10.616	Sox6_Sox9	ENSRNOT00000036750|Prickle1|ENSRNOG00000022772|prickle planar cell polarity protein 1 [Source:RGD Symbol%3BAcc:735090]
rn6_v1_chr6_-_42473738_42473738	10.4108	Sox6_Sox9	ENSRNOT00000033327|Kcnf1|ENSRNOG00000024310|potassium voltage-gated channel modifier subfamily F member 1 [Source:RGD Symbol%3BAcc:631414]
rn6_v1_chr1_+_236580034_236580034	10.1576	Sox6_Sox9	ENSRNOT00000074939|Gcnt1|ENSRNOG00000050534|glucosaminyl (N-acetyl) transferase 1%2C core 2 [Source:RGD Symbol%3BAcc:621370]
rn6_v1_chr8_-_22270647_22270647	10.1181	Sox6_Sox9	ENSRNOT00000028380|S1pr5|ENSRNOG00000020901|sphingosine-1-phosphate receptor 5 [Source:RGD Symbol%3BAcc:620566]
rn6_v1_chr6_-_94980004_94980004	10.1102	Sox6_Sox9	ENSRNOT00000006373|Rtn1|ENSRNOG00000004794|reticulon 1 [Source:RGD Symbol%3BAcc:620986]
rn6_v1_chr18_+_30474947_30474947	10.088	Sox6_Sox9	ENSRNOT00000027188|Pcdhb9|ENSRNOG00000020072|protocadherin beta 9 [Source:RGD Symbol%3BAcc:1596840]
rn6_v1_chrX_+_62727755_62727755	9.81997	Sox6_Sox9	ENSRNOT00000077055|Pcyt1b|ENSRNOG00000012358|phosphate cytidylyltransferase 1%2C choline%2C beta [Source:RGD Symbol%3BAcc:708434]
rn6_v1_chr9_-_28973246_28973246	9.61704	Sox6_Sox9	ENSRNOT00000091865|Rims1|ENSRNOG00000011000|regulating synaptic membrane exocytosis 1 [Source:RGD Symbol%3BAcc:620000]	ENSRNOT00000015453|Rims1|ENSRNOG00000011000|regulating synaptic membrane exocytosis 1 [Source:RGD Symbol%3BAcc:620000]
rn6_v1_chr4_-_184096806_184096806	9.55447	Sox6_Sox9	ENSRNOT00000055433|LOC100362344|ENSRNOG00000036910|mKIAA1238 protein-like [Source:RGD Symbol%3BAcc:2318342]
rn6_v1_chr4_+_158088505_158088505	9.43144	Sox6_Sox9	ENSRNOT00000026643|Vwf|ENSRNOG00000019689|von Willebrand factor [Source:RGD Symbol%3BAcc:621759]
rn6_v1_chr8_-_62987182_62987182	9.2477	Sox6_Sox9	ENSRNOT00000070885|Islr2|ENSRNOG00000050714|immunoglobulin superfamily containing leucine-rich repeat 2 [Source:RGD Symbol%3BAcc:6497037]
rn6_v1_chrX_+_159158194_159158195	9.2474	Sox6_Sox9	ENSRNOT00000043820|Fhl1|ENSRNOG00000000875|four and a half LIM domains 1 [Source:RGD Symbol%3BAcc:2615]	ENSRNOT00000001169|Fhl1|ENSRNOG00000000875|four and a half LIM domains 1 [Source:RGD Symbol%3BAcc:2615]	ENSRNOT00000083502|Fhl1|ENSRNOG00000000875|four and a half LIM domains 1 [Source:RGD Symbol%3BAcc:2615]
rn6_v1_chr1_+_12915734_12915734	9.20913	Sox6_Sox9	ENSRNOT00000089066|Txlnb|ENSRNOG00000060021|taxilin beta [Source:RGD Symbol%3BAcc:1307979]
rn6_v1_chr9_-_5329305_5329305	9.10895	Sox6_Sox9	ENSRNOT00000078055|Slc5a7|ENSRNOG00000010597|solute carrier family 5 member 7 [Source:RGD Symbol%3BAcc:69270]
rn6_v1_chr14_-_82287108_82287108	8.94911	Sox6_Sox9	ENSRNOT00000023144|Fgfr3|ENSRNOG00000016818|fibroblast growth factor receptor 3 [Source:RGD Symbol%3BAcc:620714]
rn6_v1_chr8_-_87282156_87282156	8.86294	Sox6_Sox9	ENSRNOT00000087874|Filip1|ENSRNOG00000011521|filamin A interacting protein 1 [Source:RGD Symbol%3BAcc:628597]
rn6_v1_chr7_-_107223047_107223047	8.76439	Sox6_Sox9	ENSRNOT00000007250|Lrrc6|ENSRNOG00000005233|leucine rich repeat containing 6 [Source:RGD Symbol%3BAcc:1559937]	ENSRNOT00000084875|Lrrc6|ENSRNOG00000005233|leucine rich repeat containing 6 [Source:RGD Symbol%3BAcc:1559937]
rn6_v1_chr6_+_95205153_95205153	8.75225	Sox6_Sox9	ENSRNOT00000007339|Lrrc9|ENSRNOG00000005409|leucine rich repeat containing 9 [Source:RGD Symbol%3BAcc:1565716]
rn6_v1_chr13_+_24823488_24823488	8.71817	Sox6_Sox9	ENSRNOT00000019907|Cdh20|ENSRNOG00000014556|cadherin 20 [Source:RGD Symbol%3BAcc:1305438]
rn6_v1_chr6_-_41039437_41039437	8.56869	Sox6_Sox9	ENSRNOT00000005774|Trib2|ENSRNOG00000004110|tribbles pseudokinase 2 [Source:RGD Symbol%3BAcc:1564451]
rn6_v1_chr20_+_44521279_44521279	8.44572	Sox6_Sox9	ENSRNOT00000085987|Fyn|ENSRNOG00000000596|FYN proto-oncogene%2C Src family tyrosine kinase [Source:RGD Symbol%3BAcc:2641]
rn6_v1_chr1_+_268189277_268189277	8.38908	Sox6_Sox9	ENSRNOT00000065001|Sorcs3|ENSRNOG00000028832|sortilin-related VPS10 domain containing receptor 3 [Source:RGD Symbol%3BAcc:1310974]
rn6_v1_chr2_-_227207584_227207635	8.37715	Sox6_Sox9	ENSRNOT00000065361|Myoz2|ENSRNOG00000014815|myozenin 2 [Source:RGD Symbol%3BAcc:1307669]	ENSRNOT00000080215|Myoz2|ENSRNOG00000014815|myozenin 2 [Source:RGD Symbol%3BAcc:1307669]
rn6_v1_chr6_+_55371738_55371738	8.31613	Sox6_Sox9	ENSRNOT00000006652|Agr3|ENSRNOG00000004994|anterior gradient 3%2C protein disulphide isomerase family member [Source:RGD Symbol%3BAcc:1565406]
rn6_v1_chr2_-_62634785_62634785	8.30091	Sox6_Sox9	ENSRNOT00000017937|Pdzd2|ENSRNOG00000013140|PDZ domain containing 2 [Source:RGD Symbol%3BAcc:619958]
rn6_v1_chr2_-_96520137_96520137	8.28311	Sox6_Sox9	ENSRNOT00000066966|Zc2hc1a|ENSRNOG00000022356|zinc finger%2C C2HC-type containing 1A [Source:RGD Symbol%3BAcc:1311970]
rn6_v1_chr19_+_27404712_27404712	7.9983	Sox6_Sox9	ENSRNOT00000023657|Mylk3|ENSRNOG00000017546|myosin light chain kinase 3 [Source:RGD Symbol%3BAcc:1305801]
rn6_v1_chr2_-_117454769_117454769	7.93244	Sox6_Sox9	ENSRNOT00000068381|Mecom|ENSRNOG00000012645|MDS1 and EVI1 complex locus [Source:RGD Symbol%3BAcc:1310997]
rn6_v1_chr19_-_26053762_26053762	7.51459	Sox6_Sox9	ENSRNOT00000004646|MAST1|ENSRNOG00000003469|microtubule associated serine/threonine kinase 1 [Source:RGD Symbol%3BAcc:631372]
rn6_v1_chrX_-_134866210_134866210	7.45635	Sox6_Sox9	ENSRNOT00000005331|Apln|ENSRNOG00000003984|apelin [Source:RGD Symbol%3BAcc:620672]
rn6_v1_chr10_-_103340922_103340922	7.23225	Sox6_Sox9	ENSRNOT00000004191|Btbd17|ENSRNOG00000003109|BTB domain containing 17 [Source:RGD Symbol%3BAcc:1563331]
rn6_v1_chr2_-_28799266_28799266	7.21679	Sox6_Sox9	ENSRNOT00000089293|Tmem171|ENSRNOG00000015449|transmembrane protein 171 [Source:RGD Symbol%3BAcc:1359492]
rn6_v1_chr8_-_39551700_39551700	7.15085	Sox6_Sox9	ENSRNOT00000091894|Pknox2|ENSRNOG00000028856|PBX/knotted 1 homeobox 2 [Source:RGD Symbol%3BAcc:1590611]	ENSRNOT00000076025|Pknox2|ENSRNOG00000028856|PBX/knotted 1 homeobox 2 [Source:RGD Symbol%3BAcc:1590611]
rn6_v1_chr3_+_176102351_176102351	7.01282	Sox6_Sox9	ENSRNOT00000013105|Col9a3|ENSRNOG00000009531|collagen type IX alpha 3 chain [Source:RGD Symbol%3BAcc:1310255]
rn6_v1_chr18_+_30909490_30909490	7.00839	Sox6_Sox9	ENSRNOT00000026967|Pcdhgb8|ENSRNOG00000027220|protocadherin gamma subfamily B%2C 8 [Source:RGD Symbol%3BAcc:1307432]
rn6_v1_chr18_+_29993361_29993361	6.97715	Sox6_Sox9	ENSRNOT00000075810|Pcdha4|ENSRNOG00000020119|protocadherin alpha 4 [Source:RGD Symbol%3BAcc:620337]
rn6_v1_chr8_+_69971778_69971778	6.76568	Sox6_Sox9	ENSRNOT00000058007|Megf11|ENSRNOG00000010634|multiple EGF-like-domains 11 [Source:RGD Symbol%3BAcc:1582797]	ENSRNOT00000037941|Megf11|ENSRNOG00000010634|multiple EGF-like-domains 11 [Source:RGD Symbol%3BAcc:1582797]	ENSRNOT00000050649|Megf11|ENSRNOG00000010634|multiple EGF-like-domains 11 [Source:RGD Symbol%3BAcc:1582797]
rn6_v1_chrX_-_105622156_105622156	6.74991	Sox6_Sox9	ENSRNOT00000029511|Armcx2|ENSRNOG00000025705|armadillo repeat containing%2C X-linked 2 [Source:RGD Symbol%3BAcc:1359132]
rn6_v1_chr11_+_86520992_86520992	6.72303	Sox6_Sox9	ENSRNOT00000040954|Gp1bb|ENSRNOG00000046981|glycoprotein Ib platelet beta subunit [Source:RGD Symbol%3BAcc:621050]
rn6_v1_chr5_+_58661049_58661049	6.72024	Sox6_Sox9	ENSRNOT00000078274|Unc13b|ENSRNOG00000008237|unc-13 homolog B [Source:RGD Symbol%3BAcc:619723]
rn6_v1_chr1_+_234363994_234363994	6.65859	Sox6_Sox9	ENSRNOT00000018137|Rorb|ENSRNOG00000013413|RAR-related orphan receptor B [Source:RGD Symbol%3BAcc:1306778]
rn6_v1_chr12_-_13668515_13668515	6.60057	Sox6_Sox9	ENSRNOT00000086847|Fscn1|ENSRNOG00000056585|fascin actin-bundling protein 1 [Source:MGI Symbol%3BAcc:MGI:1352745]
rn6_v1_chr7_-_70467915_70467915	6.34308	Sox6_Sox9	ENSRNOT00000088995|Slc26a10|ENSRNOG00000029465|solute carrier family 26%2C member 10 [Source:RGD Symbol%3BAcc:1564851]
rn6_v1_chr3_+_2396143_2396143	6.20721	Sox6_Sox9	ENSRNOT00000012388|Nrarp|ENSRNOG00000009354|Notch-regulated ankyrin repeat protein [Source:RGD Symbol%3BAcc:1591939]
rn6_v1_chr10_-_90393317_90393317	6.14098	Sox6_Sox9	ENSRNOT00000028563|Fam171a2|ENSRNOG00000021041|family with sequence similarity 171%2C member A2 [Source:RGD Symbol%3BAcc:1307966]
rn6_v1_chr16_-_71319449_71319449	6.07448	Sox6_Sox9	ENSRNOT00000029284|Fgfr1|ENSRNOG00000016050|Fibroblast growth factor receptor 1 [Source:RGD Symbol%3BAcc:620713]
rn6_v1_chr18_+_30913842_30913842	6.01047	Sox6_Sox9	ENSRNOT00000026947|Pcdhgc3|ENSRNOG00000019799|protocadherin gamma subfamily C%2C 3 [Source:EntrezGene%3BAcc:116782]
rn6_v1_chr9_-_28972835_28972835	6.00827	Sox6_Sox9	ENSRNOT00000086967|Rims1|ENSRNOG00000011000|regulating synaptic membrane exocytosis 1 [Source:RGD Symbol%3BAcc:620000]	ENSRNOT00000079684|Rims1|ENSRNOG00000011000|regulating synaptic membrane exocytosis 1 [Source:RGD Symbol%3BAcc:620000]
rn6_v1_chrX_-_115175299_115175299	5.96264	Sox6_Sox9	ENSRNOT00000074322|Dcx|ENSRNOG00000047712|doublecortin [Source:RGD Symbol%3BAcc:620670]
rn6_v1_chr18_+_30869628_30869628	5.8904	Sox6_Sox9	ENSRNOT00000060470|Pcdhgb4|ENSRNOG00000039459|protocadherin gamma subfamily B%2C 4 [Source:RGD Symbol%3BAcc:7632725]
rn6_v1_chr9_-_80167033_80167033	5.74513	Sox6_Sox9	ENSRNOT00000023530|Igfbp5|ENSRNOG00000017206|insulin-like growth factor binding protein 5 [Source:RGD Symbol%3BAcc:2876]
rn6_v1_chr11_+_16826399_16826399	5.6883	Sox6_Sox9	ENSRNOT00000050701|Cxadr|ENSRNOG00000001557|coxsackie virus and adenovirus receptor [Source:RGD Symbol%3BAcc:619794]
rn6_v1_chr17_-_81187739_81187739	5.6541	Sox6_Sox9	ENSRNOT00000063911|Hacd1|ENSRNOG00000043192|3-hydroxyacyl-CoA dehydratase 1 [Source:RGD Symbol%3BAcc:1595507]
rn6_v1_chr18_+_30880020_30880020	5.62795	Sox6_Sox9	ENSRNOT00000060468|Pcdhgb5|ENSRNOG00000039457|protocadherin gamma subfamily B%2C 5 [Source:RGD Symbol%3BAcc:1591752]
rn6_v1_chr5_+_104394119_104394119	5.60374	Sox6_Sox9	ENSRNOT00000093557|Adamtsl1|ENSRNOG00000006956|ADAMTS-like 1 [Source:RGD Symbol%3BAcc:1306439]	ENSRNOT00000093462|Adamtsl1|ENSRNOG00000006956|ADAMTS-like 1 [Source:RGD Symbol%3BAcc:1306439]
rn6_v1_chr16_+_39909270_39909270	5.60242	Sox6_Sox9	ENSRNOT00000081994|Wdr17|ENSRNOG00000048847|WD repeat domain 17 [Source:RGD Symbol%3BAcc:1590843]
rn6_v1_chr6_+_44225233_44225233	5.53305	Sox6_Sox9	ENSRNOT00000066593|Kidins220|ENSRNOG00000023176|kinase D-interacting substrate 220 [Source:RGD Symbol%3BAcc:619949]
rn6_v1_chr14_+_114126943_114127025	5.51388	Sox6_Sox9	ENSRNOT00000041638|Rtn4|ENSRNOG00000004621|reticulon 4 [Source:RGD Symbol%3BAcc:620989]	ENSRNOT00000006443|Rtn4|ENSRNOG00000004621|reticulon 4 [Source:RGD Symbol%3BAcc:620989]	ENSRNOT00000006957|Rtn4|ENSRNOG00000004621|reticulon 4 [Source:RGD Symbol%3BAcc:620989]
rn6_v1_chr4_+_113968995_113968995	5.47585	Sox6_Sox9	ENSRNOT00000079511|Rtkn|ENSRNOG00000059679|rhotekin [Source:RGD Symbol%3BAcc:727874]
rn6_v1_chr7_-_63407241_63407241	5.46934	Sox6_Sox9	ENSRNOT00000024679|Tbc1d30|ENSRNOG00000023951|TBC1 domain family%2C member 30 [Source:RGD Symbol%3BAcc:1305255]
rn6_v1_chr7_-_107768072_107768072	5.44849	Sox6_Sox9	ENSRNOT00000093189|Ndrg1|ENSRNOG00000007393|N-myc downstream regulated 1 [Source:RGD Symbol%3BAcc:1307303]
rn6_v1_chr2_+_208749996_208749996	5.32691	Sox6_Sox9	ENSRNOT00000086321|Chia|ENSRNOG00000033162|chitinase%2C acidic [Source:RGD Symbol%3BAcc:1303058]
rn6_v1_chr18_-_38088457_38088457	5.30946	Sox6_Sox9	ENSRNOT00000077814|Jakmip2|ENSRNOG00000019159|janus kinase and microtubule interacting protein 2 [Source:RGD Symbol%3BAcc:1559742]
rn6_v1_chr6_-_1942972_1942972	5.30026	Sox6_Sox9	ENSRNOT00000048711|Cdc42ep3|ENSRNOG00000032136|CDC42 effector protein 3 [Source:RGD Symbol%3BAcc:1305858]
rn6_v1_chr18_+_30890869_30890869	5.28924	Sox6_Sox9	ENSRNOT00000060466|Pcdhgb6|ENSRNOG00000039455|protocadherin gamma subfamily B%2C 6 [Source:RGD Symbol%3BAcc:7743693]
rn6_v1_chr19_+_56220755_56220755	5.27776	Sox6_Sox9	ENSRNOT00000023452|Tubb3|ENSRNOG00000017209|tubulin%2C beta 3 class III [Source:RGD Symbol%3BAcc:628595]
rn6_v1_chrX_+_28593405_28593405	5.23943	Sox6_Sox9	ENSRNOT00000071708|Tmsb4x|ENSRNOG00000047931|thymosin beta 4%2C X-linked [Source:RGD Symbol%3BAcc:621622]
rn6_v1_chr16_+_2670618_2670618	5.1708	Sox6_Sox9	ENSRNOT00000030102|Il17rd|ENSRNOG00000021966|interleukin 17 receptor D [Source:RGD Symbol%3BAcc:1565237]
rn6_v1_chr7_-_15301382_15301382	5.1558	Sox6_Sox9	ENSRNOT00000081512|Zfp763|ENSRNOG00000057416|zinc finger protein 763 [Source:RGD Symbol%3BAcc:1306264]
rn6_v1_chr15_+_41927241_41927241	5.02866	Sox6_Sox9	ENSRNOT00000012035|Trim13|ENSRNOG00000009075|tripartite motif-containing 13 [Source:RGD Symbol%3BAcc:1307609]
rn6_v1_chr5_+_90338795_90338824	4.96437	Sox6_Sox9	ENSRNOT00000077864|LOC298139|ENSRNOG00000045733|similar to RIKEN cDNA 2310003M01 [Source:RGD Symbol%3BAcc:1359584]	ENSRNOT00000058882|LOC298139|ENSRNOG00000045733|similar to RIKEN cDNA 2310003M01 [Source:RGD Symbol%3BAcc:1359584]
rn6_v1_chr2_+_203768117_203768117	4.91743	Sox6_Sox9	ENSRNOT00000080176|Igsf3|ENSRNOG00000023851|immunoglobulin superfamily%2C member 3 [Source:RGD Symbol%3BAcc:1307796]
rn6_v1_chr18_+_30875011_30875011	4.76372	Sox6_Sox9	ENSRNOT00000027009|Pcdhga8|ENSRNOG00000027277|protocadherin gamma subfamily A%2C 8 [Source:RGD Symbol%3BAcc:1310676]
rn6_v1_chr14_-_44845218_44845218	4.67262	Sox6_Sox9	ENSRNOT00000004003|Klhl5|ENSRNOG00000008421|kelch-like family member 5 [Source:RGD Symbol%3BAcc:1309661]
rn6_v1_chr4_-_88565292_88565292	4.61291	Sox6_Sox9	ENSRNOT00000008948|Lancl2|ENSRNOG00000006810|LanC like 2 [Source:RGD Symbol%3BAcc:1310809]
rn6_v1_chr14_+_84150908_84150908	4.57539	Sox6_Sox9	ENSRNOT00000005516|Dusp18|ENSRNOG00000024945|dual specificity phosphatase 18 [Source:RGD Symbol%3BAcc:1306929]
rn6_v1_chr16_-_19791832_19791832	4.44027	Sox6_Sox9	ENSRNOT00000040393|Ushbp1|ENSRNOG00000023485|USH1 protein network component harmonin binding protein 1 [Source:RGD Symbol%3BAcc:1310859]
rn6_v1_chr13_+_106751625_106751625	4.35818	Sox6_Sox9	ENSRNOT00000004992|Ush2a|ENSRNOG00000003738|usherin [Source:RGD Symbol%3BAcc:628777]
rn6_v1_chr18_+_30900291_30900291	4.32992	Sox6_Sox9	ENSRNOT00000060461|Pcdhgb7|ENSRNOG00000039454|protocadherin gamma subfamily B%2C 7 [Source:RGD Symbol%3BAcc:1588516]
rn6_v1_chr4_+_83713666_83713666	4.31874	Sox6_Sox9	ENSRNOT00000086473|Creb5|ENSRNOG00000008622|cAMP responsive element binding protein 5 [Source:RGD Symbol%3BAcc:1566107]
rn6_v1_chr16_-_71319052_71319052	4.25205	Sox6_Sox9	ENSRNOT00000050980|Fgfr1|ENSRNOG00000016050|Fibroblast growth factor receptor 1 [Source:RGD Symbol%3BAcc:620713]
rn6_v1_chr3_+_103773459_103773459	4.18582	Sox6_Sox9	ENSRNOT00000079727|Slc12a6|ENSRNOG00000005196|solute carrier family 12%2C member 6 [Source:RGD Symbol%3BAcc:1311335]
rn6_v1_chr5_+_78483893_78483904	4.04761	Sox6_Sox9	ENSRNOT00000059183|Rgs3|ENSRNOG00000024501|regulator of G-protein signaling 3 [Source:RGD Symbol%3BAcc:3566]	ENSRNOT00000059181|Rgs3|ENSRNOG00000024501|regulator of G-protein signaling 3 [Source:RGD Symbol%3BAcc:3566]
rn6_v1_chrX_+_33443186_33443186	3.85692	Sox6_Sox9	ENSRNOT00000005622|S100g|ENSRNOG00000004222|S100 calcium binding protein G [Source:RGD Symbol%3BAcc:2253]
rn6_v1_chr20_+_42966140_42966140	3.8557	Sox6_Sox9	ENSRNOT00000000707|Marcks|ENSRNOG00000000579|myristoylated alanine rich protein kinase C substrate [Source:RGD Symbol%3BAcc:3028]
rn6_v1_chr20_-_38985036_38985036	3.78002	Sox6_Sox9	ENSRNOT00000001066|Serinc1|ENSRNOG00000029360|serine incorporator 1 [Source:RGD Symbol%3BAcc:727843]
rn6_v1_chr1_-_126211439_126211439	3.77655	Sox6_Sox9	ENSRNOT00000014988|Tjp1|ENSRNOG00000011077|tight junction protein 1 [Source:RGD Symbol%3BAcc:1306305]
rn6_v1_chr10_+_92018562_92018562	3.76944	Sox6_Sox9	ENSRNOT00000006483|Arf2|ENSRNOG00000004807|ADP-ribosylation factor 2 [Source:RGD Symbol%3BAcc:621271]
rn6_v1_chr3_+_3767394_3767394	3.69566	Sox6_Sox9	ENSRNOT00000067840|Gpsm1|ENSRNOG00000018666|G-protein signaling modulator 1 [Source:RGD Symbol%3BAcc:628682]
rn6_v1_chr14_-_72122158_72122158	3.6796	Sox6_Sox9	ENSRNOT00000064495|C1qtnf7|ENSRNOG00000005094|C1q and tumor necrosis factor related protein 7 [Source:RGD Symbol%3BAcc:1306978]
rn6_v1_chr1_-_167911961_167911961	3.59769	Sox6_Sox9	ENSRNOT00000025097|Olr59|ENSRNOG00000018606|olfactory receptor 59 [Source:RGD Symbol%3BAcc:628858]
rn6_v1_chrX_+_40363646_40363646	3.58919	Sox6_Sox9	ENSRNOT00000010135|Sms|ENSRNOG00000007688|spermine synthase [Source:RGD Symbol%3BAcc:1564826]
rn6_v1_chr7_-_140640953_140640953	3.58181	Sox6_Sox9	ENSRNOT00000083156|Tuba1a|ENSRNOG00000060728|tubulin%2C alpha 1A [Source:RGD Symbol%3BAcc:619717]
rn6_v1_chr3_+_123031307_123031307	3.51878	Sox6_Sox9	ENSRNOT00000080379|Ptpra|ENSRNOG00000021223|protein tyrosine phosphatase%2C receptor type%2C A [Source:RGD Symbol%3BAcc:3450]
rn6_v1_chrX_+_65566047_65566047	3.51442	Sox6_Sox9	ENSRNOT00000092103|Heph|ENSRNOG00000012294|hephaestin [Source:RGD Symbol%3BAcc:71060]
rn6_v1_chr13_-_95250235_95250235	3.48776	Sox6_Sox9	ENSRNOT00000085648|Akt3|ENSRNOG00000021497|AKT serine/threonine kinase 3 [Source:RGD Symbol%3BAcc:62390]
rn6_v1_chr3_+_116899878_116899906	3.47746	Sox6_Sox9	ENSRNOT00000090802|Sema6d|ENSRNOG00000004812|semaphorin 6D [Source:RGD Symbol%3BAcc:1310910]	ENSRNOT00000066101|Sema6d|ENSRNOG00000004812|semaphorin 6D [Source:RGD Symbol%3BAcc:1310910]
rn6_v1_chr6_-_51019407_51019407	3.45922	Sox6_Sox9	ENSRNOT00000011659|Gpr22|ENSRNOG00000008423|G protein-coupled receptor 22 [Source:RGD Symbol%3BAcc:1310848]
rn6_v1_chr3_-_160038078_160038078	3.40775	Sox6_Sox9	ENSRNOT00000013445|Serinc3|ENSRNOG00000009552|serine incorporator 3 [Source:RGD Symbol%3BAcc:1308390]
rn6_v1_chr17_+_23116661_23116661	3.37879	Sox6_Sox9	ENSRNOT00000067374|Nedd9|ENSRNOG00000014548|neural precursor cell expressed%2C developmentally down-regulated 9 [Source:RGD Symbol%3BAcc:1306276]
rn6_v1_chr18_+_25613831_25613831	3.27857	Sox6_Sox9	ENSRNOT00000091040|Tslp|ENSRNOG00000058856|thymic stromal lymphopoietin [Source:RGD Symbol%3BAcc:1586479]
rn6_v1_chr20_+_48335540_48335540	3.21418	Sox6_Sox9	ENSRNOT00000000352|Cd24|ENSRNOG00000000321|CD24 molecule [Source:RGD Symbol%3BAcc:2298]
rn6_v1_chr5_+_113725717_113725717	3.10752	Sox6_Sox9	ENSRNOT00000032248|Tek|ENSRNOG00000008587|TEK receptor tyrosine kinase [Source:RGD Symbol%3BAcc:620980]
rn6_v1_chr17_+_18151982_18151982	3.09644	Sox6_Sox9	ENSRNOT00000066447|Kif13a|ENSRNOG00000001455|kinesin family member 13A [Source:RGD Symbol%3BAcc:1307825]
rn6_v1_chr1_+_13595295_13595295	3.08862	Sox6_Sox9	ENSRNOT00000079250|Nhsl1|ENSRNOG00000060603|NHS-like 1 [Source:RGD Symbol%3BAcc:1308124]
rn6_v1_chr11_+_57265732_57265732	3.01744	Sox6_Sox9	ENSRNOT00000093174|Phldb2|ENSRNOG00000002171|pleckstrin homology-like domain%2C family B%2C member 2 [Source:RGD Symbol%3BAcc:1591402]
rn6_v1_chr6_-_79306443_79306443	3.01402	Sox6_Sox9	ENSRNOT00000030706|Clec14a|ENSRNOG00000022697|C-type lectin domain family 14%2C member A [Source:RGD Symbol%3BAcc:1306232]
rn6_v1_chr7_+_120891940_120891940	3.00408	Sox6_Sox9	ENSRNOT00000018787|Cby1|ENSRNOG00000013892|chibby family member 1%2C beta catenin antagonist [Source:RGD Symbol%3BAcc:708481]
rn6_v1_chr9_+_47134034_47134034	2.97926	Sox6_Sox9	ENSRNOT00000020108|Il1rl1|ENSRNOG00000014835|interleukin 1 receptor-like 1 [Source:RGD Symbol%3BAcc:2894]
rn6_v1_chr5_-_124642569_124642569	2.96392	Sox6_Sox9	ENSRNOT00000010680|Prkaa2|ENSRNOG00000007706|protein kinase AMP-activated catalytic subunit alpha 2 [Source:RGD Symbol%3BAcc:620893]
rn6_v1_chr8_-_109576353_109576353	2.94094	Sox6_Sox9	ENSRNOT00000010320|Ppp2r3a|ENSRNOG00000022999|protein phosphatase 2%2C regulatory subunit B''%2C alpha [Source:RGD Symbol%3BAcc:1306958]
rn6_v1_chr14_-_81399353_81399353	2.88896	Sox6_Sox9	ENSRNOT00000018340|Add1|ENSRNOG00000013039|adducin 1 [Source:RGD Symbol%3BAcc:2041]
rn6_v1_chr1_+_264741911_264741911	2.84788	Sox6_Sox9	ENSRNOT00000019956|Sema4g|ENSRNOG00000014650|semaphorin 4G [Source:RGD Symbol%3BAcc:1310436]
rn6_v1_chr7_-_59514939_59514939	2.82255	Sox6_Sox9	ENSRNOT00000085579|Kcnmb4|ENSRNOG00000054458|potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:RGD Symbol%3BAcc:620728]
rn6_v1_chr3_-_8615532_8615532	2.78757	Sox6_Sox9	ENSRNOT00000021132|Wdr34|ENSRNOG00000015636|WD repeat domain 34 [Source:RGD Symbol%3BAcc:1359465]
rn6_v1_chr4_-_72143748_72143748	2.77492	Sox6_Sox9	ENSRNOT00000024428|Tcaf1|ENSRNOG00000017911|TRPM8 channel-associated factor 1 [Source:RGD Symbol%3BAcc:1565474]
rn6_v1_chr13_+_51972974_51972974	2.77367	Sox6_Sox9	ENSRNOT00000008164|Arl8a|ENSRNOG00000005988|ADP-ribosylation factor like GTPase 8A [Source:RGD Symbol%3BAcc:1565940]
rn6_v1_chr12_-_31629881_31629881	2.72485	Sox6_Sox9	ENSRNOT00000001238|Piwil1|ENSRNOG00000000934|piwi-like RNA-mediated gene silencing 1 [Source:RGD Symbol%3BAcc:1306980]
rn6_v1_chr2_+_22909569_22909569	2.71588	Sox6_Sox9	ENSRNOT00000073871|Homer1|ENSRNOG00000047014|homer scaffolding protein 1 [Source:RGD Symbol%3BAcc:628725]
rn6_v1_chr2_-_158156444_158156444	2.6076	Sox6_Sox9	ENSRNOT00000088559|Veph1|ENSRNOG00000012427|ventricular zone expressed PH domain-containing 1 [Source:RGD Symbol%3BAcc:1308217]
rn6_v1_chr8_+_113939886_113939886	2.57115	Sox6_Sox9	ENSRNOT00000079562|Aste1|ENSRNOG00000013059|asteroid homolog 1 (Drosophila) [Source:RGD Symbol%3BAcc:1304643]
rn6_v1_chr1_-_277902279_277902279	2.55187	Sox6_Sox9	ENSRNOT00000078416|Ablim1|ENSRNOG00000046333|actin-binding LIM protein 1 [Source:RGD Symbol%3BAcc:1565768]
rn6_v1_chr18_+_60392376_60392376	2.54842	Sox6_Sox9	ENSRNOT00000023890|Nedd4l|ENSRNOG00000017610|neural precursor cell expressed%2C developmentally down-regulated 4-like%2C E3 ubiquitin protein ligase [Source:RGD Symbol%3BAcc:735047]
rn6_v1_chr15_+_7871497_7871497	2.46113	Sox6_Sox9	ENSRNOT00000046879|Ube2e2|ENSRNOG00000032690|ubiquitin-conjugating enzyme E2E 2 [Source:RGD Symbol%3BAcc:1305644]
rn6_v1_chr12_+_10254951_10254951	2.4334	Sox6_Sox9	ENSRNOT00000061129|Gpr12|ENSRNOG00000039832|G protein-coupled receptor 12 [Source:RGD Symbol%3BAcc:68333]
rn6_v1_chr1_+_264059374_264059374	2.32878	Sox6_Sox9	ENSRNOT00000075397|Scd2|ENSRNOG00000046005|stearoyl-Coenzyme A desaturase 2 [Source:RGD Symbol%3BAcc:621177]
rn6_v1_chrX_+_152885246_152885246	2.27487	Sox6_Sox9	ENSRNOT00000087074|AABR07042326.3|ENSRNOG00000060540|
rn6_v1_chr14_-_6786144_6786144	2.23062	Sox6_Sox9	ENSRNOT00000091558|Mepe|ENSRNOG00000002154|matrix extracellular phosphoglycoprotein [Source:RGD Symbol%3BAcc:71036]
rn6_v1_chr6_+_132510757_132510757	2.1764	Sox6_Sox9	ENSRNOT00000080230|Evl|ENSRNOG00000014476|Enah/Vasp-like [Source:RGD Symbol%3BAcc:621150]
rn6_v1_chr18_-_26211445_26211445	2.17417	Sox6_Sox9	ENSRNOT00000027739|Nrep|ENSRNOG00000020467|neuronal regeneration related protein [Source:RGD Symbol%3BAcc:631411]
rn6_v1_chr18_-_16497886_16497886	2.12755	Sox6_Sox9	ENSRNOT00000021624|Rprd1a|ENSRNOG00000016036|regulation of nuclear pre-mRNA domain containing 1A [Source:RGD Symbol%3BAcc:1307374]
rn6_v1_chr14_+_81858737_81858743	2.12585	Sox6_Sox9	ENSRNOT00000029784|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]	ENSRNOT00000058068|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]	ENSRNOT00000058067|Poln|ENSRNOG00000027929|DNA polymerase nu [Source:RGD Symbol%3BAcc:7675413]
rn6_v1_chr3_+_148510779_148510779	2.05903	Sox6_Sox9	ENSRNOT00000012156|Xkr7|ENSRNOG00000009180|XK related 7 [Source:RGD Symbol%3BAcc:1359224]
rn6_v1_chr3_-_137969658_137969658	2.05696	Sox6_Sox9	ENSRNOT00000007727|Bfsp1|ENSRNOG00000005707|beaded filament structural protein 1 [Source:RGD Symbol%3BAcc:2205]
rn6_v1_chr4_-_166803127_166803127	1.97692	Sox6_Sox9	ENSRNOT00000067909|RGD1306750|ENSRNOG00000042018|LOC362451 [Source:RGD Symbol%3BAcc:1306750]
rn6_v1_chr6_+_91595823_91595823	1.95285	Sox6_Sox9	ENSRNOT00000006223|Klhdc2|ENSRNOG00000004474|kelch domain containing 2 [Source:RGD Symbol%3BAcc:1306504]
rn6_v1_chr3_+_20993205_20993205	1.94257	Sox6_Sox9	ENSRNOT00000010465|Olr419|ENSRNOG00000007962|olfactory receptor 419 [Source:RGD Symbol%3BAcc:1334437]
rn6_v1_chr3_+_155160481_155160481	1.90424	Sox6_Sox9	ENSRNOT00000021133|Ppp1r16b|ENSRNOG00000015614|protein phosphatase 1%2C regulatory subunit 16B [Source:RGD Symbol%3BAcc:1589460]
rn6_v1_chr5_+_133865331_133865331	1.85033	Sox6_Sox9	ENSRNOT00000035409|Tal1|ENSRNOG00000025051|TAL bHLH transcription factor 1%2C erythroid differentiation factor [Source:RGD Symbol%3BAcc:1306748]
rn6_v1_chr14_-_84189266_84189266	1.84325	Sox6_Sox9	ENSRNOT00000005934|Tcn2|ENSRNOG00000004280|transcobalamin 2 [Source:RGD Symbol%3BAcc:620681]
rn6_v1_chr6_-_135877883_135877883	1.8137	Sox6_Sox9	ENSRNOT00000079092|AABR07065589.1|ENSRNOG00000053429|
rn6_v1_chr10_-_74119009_74119032	1.78918	Sox6_Sox9	ENSRNOT00000085712|Dhx40|ENSRNOG00000004549|DEAH-box helicase 40 [Source:RGD Symbol%3BAcc:1359618]	ENSRNOT00000006926|Dhx40|ENSRNOG00000004549|DEAH-box helicase 40 [Source:RGD Symbol%3BAcc:1359618]
rn6_v1_chr2_+_189865915_189865915	1.77938	Sox6_Sox9	ENSRNOT00000077362|Ilf2|ENSRNOG00000014154|interleukin enhancer binding factor 2 [Source:RGD Symbol%3BAcc:1305734]
rn6_v1_chr10_-_16731898_16731898	1.76461	Sox6_Sox9	ENSRNOT00000028186|Crebrf|ENSRNOG00000020769|CREB3 regulatory factor [Source:RGD Symbol%3BAcc:1310862]
rn6_v1_chr9_-_14551519_14551519	1.74979	Sox6_Sox9	ENSRNOT00000067623|Oard1|ENSRNOG00000012679|O-acyl-ADP-ribose deacylase 1 [Source:RGD Symbol%3BAcc:1308299]
rn6_v1_chr10_+_82775691_82775691	1.72182	Sox6_Sox9	ENSRNOT00000030737|Hils1|ENSRNOG00000024041|histone linker H1 domain%2C spermatid-specific 1 [Source:RGD Symbol%3BAcc:1585185]
rn6_v1_chr14_-_104960141_104960141	1.68195	Sox6_Sox9	ENSRNOT00000056944|Aftph|ENSRNOG00000005411|aftiphilin [Source:RGD Symbol%3BAcc:1311920]
rn6_v1_chrX_-_157172068_157172068	1.65946	Sox6_Sox9	ENSRNOT00000087962|Dusp9|ENSRNOG00000055185|dual specificity phosphatase 9 [Source:RGD Symbol%3BAcc:1565535]
rn6_v1_chr5_+_173340487_173340487	1.6396	Sox6_Sox9	ENSRNOT00000078306|Acap3|ENSRNOG00000022307|ArfGAP with coiled-coil%2C ankyrin repeat and PH domains 3 [Source:RGD Symbol%3BAcc:1310711]
rn6_v1_chr4_-_180234804_180234804	1.61792	Sox6_Sox9	ENSRNOT00000070957|Bhlhe41|ENSRNOG00000048961|basic helix-loop-helix family%2C member e41 [Source:RGD Symbol%3BAcc:70900]
rn6_v1_chr7_+_141702038_141702038	1.55758	Sox6_Sox9	ENSRNOT00000086577|Dip2b|ENSRNOG00000056106|disco-interacting protein 2 homolog B [Source:RGD Symbol%3BAcc:1305671]
rn6_v1_chr15_-_39886613_39886613	1.54977	Sox6_Sox9	ENSRNOT00000089963|Cdadc1|ENSRNOG00000012209|cytidine and dCMP deaminase domain containing 1 [Source:RGD Symbol%3BAcc:1311845]
rn6_v1_chr7_+_38858062_38858062	1.51201	Sox6_Sox9	ENSRNOT00000006234|Kera|ENSRNOG00000004635|keratocan [Source:RGD Symbol%3BAcc:1305816]
rn6_v1_chr15_-_2731462_2731462	1.50578	Sox6_Sox9	ENSRNOT00000018023|Samd8|ENSRNOG00000013236|sterile alpha motif domain containing 8 [Source:RGD Symbol%3BAcc:1306447]
rn6_v1_chr1_+_13261876_13261876	1.48932	Sox6_Sox9	ENSRNOT00000090703|Reps1|ENSRNOG00000059224|RALBP1 associated Eps domain containing 1 [Source:RGD Symbol%3BAcc:1307131]
rn6_v1_chr12_+_10255416_10255416	1.48572	Sox6_Sox9	ENSRNOT00000092720|Gpr12|ENSRNOG00000039832|G protein-coupled receptor 12 [Source:RGD Symbol%3BAcc:68333]
rn6_v1_chr5_-_86696388_86696388	1.42806	Sox6_Sox9	ENSRNOT00000007812|Megf9|ENSRNOG00000005932|multiple EGF-like-domains 9 [Source:RGD Symbol%3BAcc:1308330]
rn6_v1_chr5_-_153625869_153625869	1.40808	Sox6_Sox9	ENSRNOT00000024464|Clic4|ENSRNOG00000018109|chloride intracellular channel 4 [Source:RGD Symbol%3BAcc:61857]
rn6_v1_chr15_-_50425900_50425900	1.40559	Sox6_Sox9	ENSRNOT00000058715|Adam28|ENSRNOG00000014518|ADAM metallopeptidase domain 28 [Source:RGD Symbol%3BAcc:727820]
rn6_v1_chr10_+_45966926_45966926	1.39793	Sox6_Sox9	ENSRNOT00000067584|Olfr225|ENSRNOG00000021988|olfactory receptor 225 [Source:MGI Symbol%3BAcc:MGI:3030059]
rn6_v1_chr1_-_168611670_168611670	1.38396	Sox6_Sox9	ENSRNOT00000021273|Olr106|ENSRNOG00000015893|olfactory receptor 106 [Source:RGD Symbol%3BAcc:1334302]
rn6_v1_chr3_+_146980923_146980923	1.36331	Sox6_Sox9	ENSRNOT00000011654|Nsfl1c|ENSRNOG00000008604|NSFL1 cofactor [Source:RGD Symbol%3BAcc:619952]
rn6_v1_chr11_+_13499164_13499164	1.35316	Sox6_Sox9	ENSRNOT00000013159|LOC680121|ENSRNOG00000009920|similar to heat shock protein 8 [Source:RGD Symbol%3BAcc:1595502]
rn6_v1_chr7_+_66717434_66717434	1.34911	Sox6_Sox9	ENSRNOT00000077878|Mon2|ENSRNOG00000004185|MON2 homolog%2C regulator of endosome-to-Golgi trafficking [Source:RGD Symbol%3BAcc:1308808]
rn6_v1_chr18_+_76559811_76559811	1.33709	Sox6_Sox9	ENSRNOT00000084621|Pard6g|ENSRNOG00000055157|par-6 family cell polarity regulator gamma [Source:RGD Symbol%3BAcc:1305016]
rn6_v1_chr5_+_152606847_152606847	1.33577	Sox6_Sox9	ENSRNOT00000089070|Pafah2|ENSRNOG00000022288|platelet-activating factor acetylhydrolase 2 [Source:RGD Symbol%3BAcc:631399]
rn6_v1_chr3_-_9936352_9936405	1.32778	Sox6_Sox9	ENSRNOT00000011224|Fnbp1|ENSRNOG00000008258|formin binding protein 1 [Source:RGD Symbol%3BAcc:621350]	ENSRNOT00000042798|Fnbp1|ENSRNOG00000008258|formin binding protein 1 [Source:RGD Symbol%3BAcc:621350]
rn6_v1_chr6_+_145546595_145546595	1.31386	Sox6_Sox9	ENSRNOT00000007112|Rapgef5|ENSRNOG00000005271|Rap guanine nucleotide exchange factor 5 [Source:RGD Symbol%3BAcc:1561668]
rn6_v1_chr4_-_164453171_164453222	1.28732	Sox6_Sox9	ENSRNOT00000077539|Ly49s6|ENSRNOG00000053337|Ly49 stimulatory receptor 6 [Source:RGD Symbol%3BAcc:1549735]	ENSRNOT00000083610|Ly49s6|ENSRNOG00000053337|Ly49 stimulatory receptor 6 [Source:RGD Symbol%3BAcc:1549735]	ENSRNOT00000079975|Ly49s6|ENSRNOG00000053337|Ly49 stimulatory receptor 6 [Source:RGD Symbol%3BAcc:1549735]
rn6_v1_chr8_+_129617812_129617812	1.27882	Sox6_Sox9	ENSRNOT00000079085|Ctnnb1|ENSRNOG00000054172|catenin beta 1 [Source:RGD Symbol%3BAcc:70487]
rn6_v1_chr8_+_117620317_117620317	1.27468	Sox6_Sox9	ENSRNOT00000084220|Celsr3|ENSRNOG00000053889|cadherin%2C EGF LAG seven-pass G-type receptor 3 [Source:RGD Symbol%3BAcc:621787]
rn6_v1_chr3_-_55951584_55951584	1.25285	Sox6_Sox9	ENSRNOT00000036585|Fastkd1|ENSRNOG00000024335|FAST kinase domains 1 [Source:RGD Symbol%3BAcc:1563531]
rn6_v1_chr1_-_185569190_185569190	1.24507	Sox6_Sox9	ENSRNOT00000090773|RGD1311703|ENSRNOG00000053659|similar to sid2057p [Source:RGD Symbol%3BAcc:1311703]
rn6_v1_chr4_-_51199570_51199570	1.16667	Sox6_Sox9	ENSRNOT00000010788|Slc13a1|ENSRNOG00000008121|solute carrier family 13 member 1 [Source:RGD Symbol%3BAcc:61919]
rn6_v1_chr5_+_107233230_107233230	1.13527	Sox6_Sox9	ENSRNOT00000029976|Ifne|ENSRNOG00000024204|interferon%2C epsilon [Source:RGD Symbol%3BAcc:1565065]
rn6_v1_chr9_-_94634109_94634109	1.12435	Sox6_Sox9	ENSRNOT00000081131|AABR07068274.1|ENSRNOG00000053030|
rn6_v1_chr4_+_155321553_155321553	1.07788	Sox6_Sox9	ENSRNOT00000089614|Mfap5|ENSRNOG00000015505|microfibrillar associated protein 5 [Source:RGD Symbol%3BAcc:1307919]
rn6_v1_chr4_+_1640318_1640318	1.05395	Sox6_Sox9	ENSRNOT00000083649|Olr1249|ENSRNOG00000055051|olfactory receptor 1249 [Source:RGD Symbol%3BAcc:1333392]
rn6_v1_chr15_-_29369504_29369504	0.981495	Sox6_Sox9	ENSRNOT00000060297|AABR07017624.1|ENSRNOG00000048808|
rn6_v1_chr6_-_104290579_104290579	0.955032	Sox6_Sox9	ENSRNOT00000066014|Erh|ENSRNOG00000004883|enhancer of rudimentary homolog (Drosophila) [Source:RGD Symbol%3BAcc:1595409]
rn6_v1_chr2_+_123617794_123617794	0.95291	Sox6_Sox9	ENSRNOT00000080632|RGD1307100|ENSRNOG00000038436|similar to RIKEN cDNA D630029K19 [Source:RGD Symbol%3BAcc:1307100]
rn6_v1_chr6_+_50725085_50725085	0.944562	Sox6_Sox9	ENSRNOT00000009473|Slc26a3|ENSRNOG00000006878|solute carrier family 26 member 3 [Source:RGD Symbol%3BAcc:620623]
rn6_v1_chrX_-_70460536_70460536	0.944374	Sox6_Sox9	ENSRNOT00000076824|Pdzd11|ENSRNOG00000002838|PDZ domain containing 11 [Source:RGD Symbol%3BAcc:1560007]
rn6_v1_chr2_+_188087486_188087486	0.94194	Sox6_Sox9	ENSRNOT00000027455|Rit1|ENSRNOG00000020232|Ras-like without CAAX 1 [Source:RGD Symbol%3BAcc:1559874]
rn6_v1_chr8_+_54925607_54925607	0.938011	Sox6_Sox9	ENSRNOT00000059210|Plet1|ENSRNOG00000024346|placenta expressed transcript 1 [Source:RGD Symbol%3BAcc:1359217]
rn6_v1_chr9_+_14551758_14551758	0.883169	Sox6_Sox9	ENSRNOT00000017157|Nfya|ENSRNOG00000012702|nuclear transcription factor Y subunit alpha [Source:RGD Symbol%3BAcc:70976]
rn6_v1_chr5_-_75910805_75910805	0.876145	Sox6_Sox9	ENSRNOT00000019099|Olr854|ENSRNOG00000014263|olfactory receptor 854 [Source:RGD Symbol%3BAcc:1332920]
rn6_v1_chr10_+_37458452_37458452	0.815671	Sox6_Sox9	ENSRNOT00000079411|Cdkl3|ENSRNOG00000059485|cyclin-dependent kinase-like 3 [Source:RGD Symbol%3BAcc:619874]
rn6_v1_chr4_+_45000973_45001055	0.772327	Sox6_Sox9	ENSRNOT00000084736|ST7|ENSRNOG00000056243|suppression of tumorigenicity 7 [Source:RGD Symbol%3BAcc:1303148]	ENSRNOT00000080880|ST7|ENSRNOG00000056243|suppression of tumorigenicity 7 [Source:RGD Symbol%3BAcc:1303148]
rn6_v1_chr7_+_66717267_66717267	0.76206	Sox6_Sox9	ENSRNOT00000005654|Mon2|ENSRNOG00000004185|MON2 homolog%2C regulator of endosome-to-Golgi trafficking [Source:RGD Symbol%3BAcc:1308808]
rn6_v1_chr8_-_96547568_96547568	0.743811	Sox6_Sox9	ENSRNOT00000078343|RGD1560775|ENSRNOG00000042726|similar to RIKEN cDNA 4930579C12 gene [Source:RGD Symbol%3BAcc:1560775]
rn6_v1_chr10_+_14547172_14547172	0.738359	Sox6_Sox9	ENSRNOT00000092043|Unkl|ENSRNOG00000054605|unkempt family like zinc finger [Source:RGD Symbol%3BAcc:1565247]
rn6_v1_chr16_+_23553647_23553647	0.729137	Sox6_Sox9	ENSRNOT00000041994|Psd3|ENSRNOG00000013884|pleckstrin and Sec7 domain containing 3 [Source:RGD Symbol%3BAcc:1559968]
rn6_v1_chr4_+_167419911_167419911	0.728942	Sox6_Sox9	ENSRNOT00000078821|Grpcb|ENSRNOG00000021313|glutamine/glutamic acid-rich protein B [Source:RGD Symbol%3BAcc:735181]	ENSRNOT00000038396|Grpcb|ENSRNOG00000021313|glutamine/glutamic acid-rich protein B [Source:RGD Symbol%3BAcc:735181]
rn6_v1_chr10_+_35537977_35537977	0.719874	Sox6_Sox9	ENSRNOT00000071917|Rnf130|ENSRNOG00000046330|ring finger protein 130 [Source:MGI Symbol%3BAcc:MGI:1891717]
rn6_v1_chr18_-_86279680_86279680	0.686743	Sox6_Sox9	ENSRNOT00000006169|LOC689166|ENSRNOG00000004661|hypothetical protein LOC689166 [Source:RGD Symbol%3BAcc:1596138]
rn6_v1_chr6_+_134844676_134844676	0.679779	Sox6_Sox9	ENSRNOT00000007595|Ppp2r5c|ENSRNOG00000004973|protein phosphatase 2%2C regulatory subunit B'%2C gamma [Source:RGD Symbol%3BAcc:1585097]
rn6_v1_chr8_-_33121002_33121002	0.674073	Sox6_Sox9	ENSRNOT00000047211|LOC100362981|ENSRNOG00000034226|LRRGT00010-like [Source:RGD Symbol%3BAcc:2324608]
rn6_v1_chr20_+_9743269_9743296	0.664113	Sox6_Sox9	ENSRNOT00000001533|Abcg1|ENSRNOG00000001158|ATP binding cassette subfamily G member 1 [Source:RGD Symbol%3BAcc:620294]	ENSRNOT00000083505|Abcg1|ENSRNOG00000001158|ATP binding cassette subfamily G member 1 [Source:RGD Symbol%3BAcc:620294]
rn6_v1_chr1_+_65564173_65564173	0.661086	Sox6_Sox9	ENSRNOT00000038860|Zbtb45|ENSRNOG00000027459|zinc finger and BTB domain containing 45 [Source:RGD Symbol%3BAcc:1310920]
rn6_v1_chr4_+_1611053_1611053	0.647362	Sox6_Sox9	ENSRNOT00000071489|Olr1247|ENSRNOG00000050613|olfactory receptor 1247 [Source:RGD Symbol%3BAcc:1333436]
rn6_v1_chr4_-_71881652_71881652	0.635929	Sox6_Sox9	ENSRNOT00000045027|Olr802|ENSRNOG00000045828|olfactory receptor 802 [Source:RGD Symbol%3BAcc:1333188]
rn6_v1_chr3_-_147188929_147188929	0.635588	Sox6_Sox9	ENSRNOT00000055455|Rad21l1|ENSRNOG00000022335|RAD21 cohesin complex component like 1 [Source:RGD Symbol%3BAcc:1587557]
rn6_v1_chr7_-_120490061_120490061	0.634186	Sox6_Sox9	ENSRNOT00000016247|Slc16a8|ENSRNOG00000012090|solute carrier family 16 member 8 [Source:RGD Symbol%3BAcc:69282]
rn6_v1_chr4_-_164899041_164899041	0.612487	Sox6_Sox9	ENSRNOT00000090316|Ly49i2|ENSRNOG00000051600|Ly49 inhibitory receptor 2 [Source:RGD Symbol%3BAcc:628669]
rn6_v1_chrX_+_65271366_65271366	0.530769	Sox6_Sox9	ENSRNOT00000093499|Msn|ENSRNOG00000030118|moesin [Source:RGD Symbol%3BAcc:621260]
rn6_v1_chr5_+_21830882_21830882	0.524825	Sox6_Sox9	ENSRNOT00000008901|Chd7|ENSRNOG00000006689|chromodomain helicase DNA binding protein 7 [Source:RGD Symbol%3BAcc:1311921]
rn6_v1_chr3_-_77893647_77893647	0.501468	Sox6_Sox9	ENSRNOT00000080803|Olr678|ENSRNOG00000056750|olfactory receptor 678 [Source:RGD Symbol%3BAcc:1333756]
rn6_v1_chr20_+_38935820_38935820	0.491757	Sox6_Sox9	ENSRNOT00000001059|Hsf2|ENSRNOG00000000808|heat shock transcription factor 2 [Source:RGD Symbol%3BAcc:68395]
rn6_v1_chr3_-_151724654_151724654	0.467885	Sox6_Sox9	ENSRNOT00000026964|Rbm39|ENSRNOG00000019848|RNA binding motif protein 39 [Source:RGD Symbol%3BAcc:1310071]
rn6_v1_chrX_-_106085878_106085878	0.455306	Sox6_Sox9	ENSRNOT00000049735|Prame|ENSRNOG00000011113|preferentially expressed antigen in melanoma [Source:RGD Symbol%3BAcc:1596887]
rn6_v1_chr9_+_101222846_101222846	0.441977	Sox6_Sox9	ENSRNOT00000074328|Vom1r64|ENSRNOG00000048104|vomeronasal 1 receptor 64 [Source:RGD Symbol%3BAcc:4108498]
rn6_v1_chr4_+_1601652_1601652	0.435316	Sox6_Sox9	ENSRNOT00000072284|LOC100912152|ENSRNOG00000049611|olfactory receptor 8B3-like [Source:RGD Symbol%3BAcc:6488812]
rn6_v1_chr1_-_172552099_172552099	0.431911	Sox6_Sox9	ENSRNOT00000090373|Olr257|ENSRNOG00000051603|olfactory receptor 257 [Source:RGD Symbol%3BAcc:1334255]
rn6_v1_chr13_-_77959089_77959089	0.424677	Sox6_Sox9	ENSRNOT00000003586|Cacybp|ENSRNOG00000002572|calcyclin binding protein [Source:RGD Symbol%3BAcc:1303146]
rn6_v1_chr10_-_18131562_18131562	0.412801	Sox6_Sox9	ENSRNOT00000006676|Tlx3|ENSRNOG00000004976|T-cell leukemia%2C homeobox 3 [Source:RGD Symbol%3BAcc:1564190]
rn6_v1_chr5_+_101526551_101526551	0.389349	Sox6_Sox9	ENSRNOT00000015254|Snapc3|ENSRNOG00000010825|small nuclear RNA activating complex%2C polypeptide 3 [Source:RGD Symbol%3BAcc:1305172]
rn6_v1_chrX_-_63999622_63999622	0.387322	Sox6_Sox9	ENSRNOT00000090902|LOC103694487|ENSRNOG00000051633|protein gar2-like [Source:RGD Symbol%3BAcc:9476443]
rn6_v1_chr10_+_23661013_23661013	0.383334	Sox6_Sox9	ENSRNOT00000076664|Ebf1|ENSRNOG00000028845|early B-cell factor 1 [Source:RGD Symbol%3BAcc:620953]
rn6_v1_chr5_+_154205402_154205402	0.381825	Sox6_Sox9	ENSRNOT00000064925|Srsf10|ENSRNOG00000007992|serine and arginine rich splicing factor 10 [Source:RGD Symbol%3BAcc:1311067]
rn6_v1_chr19_+_28377249_28377249	0.370102	Sox6_Sox9	ENSRNOT00000059668|Vom1r21|ENSRNOG00000039019|vomeronasal 1 receptor 21 [Source:RGD Symbol%3BAcc:1359719]
rn6_v1_chr3_+_102456938_102456938	0.358893	Sox6_Sox9	ENSRNOT00000051827|Olr748|ENSRNOG00000045847|olfactory receptor 748 [Source:RGD Symbol%3BAcc:1334379]
rn6_v1_chr5_+_105230580_105230580	0.348949	Sox6_Sox9	ENSRNOT00000010056|Acer2|ENSRNOG00000007637|alkaline ceramidase 2 [Source:RGD Symbol%3BAcc:1304629]
rn6_v1_chr9_-_85528860_85528869	0.342918	Sox6_Sox9	ENSRNOT00000063834|Wdfy1|ENSRNOG00000015080|WD repeat and FYVE domain containing 1 [Source:RGD Symbol%3BAcc:1305996]	ENSRNOT00000088963|Wdfy1|ENSRNOG00000015080|WD repeat and FYVE domain containing 1 [Source:RGD Symbol%3BAcc:1305996]
rn6_v1_chr8_+_19972793_19972793	0.335157	Sox6_Sox9	ENSRNOT00000068066|Olr1159|ENSRNOG00000049191|olfactory receptor 1159 [Source:RGD Symbol%3BAcc:1334067]
rn6_v1_chr1_+_229416489_229416489	0.332317	Sox6_Sox9	ENSRNOT00000028617|Olr336|ENSRNOG00000021078|olfactory receptor 336 [Source:RGD Symbol%3BAcc:1333328]
rn6_v1_chr2_-_165739874_165739874	0.329042	Sox6_Sox9	ENSRNOT00000014384|Kpna4|ENSRNOG00000010768|karyopherin subunit alpha 4 [Source:RGD Symbol%3BAcc:1311483]
rn6_v1_chr8_-_86286991_86286991	0.31365	Sox6_Sox9	ENSRNOT00000046322|LOC367117|ENSRNOG00000031132|similar to RIKEN cDNA 2900055D03 [Source:RGD Symbol%3BAcc:1562651]
rn6_v1_chr14_+_17492081_17492081	0.266622	Sox6_Sox9	ENSRNOT00000003346|G3bp2|ENSRNOG00000002433|G3BP stress granule assembly factor 2 [Source:RGD Symbol%3BAcc:1309571]
rn6_v1_chr8_+_41247536_41247536	0.255169	Sox6_Sox9	ENSRNOT00000073027|Olr1219|ENSRNOG00000047723|olfactory receptor 1219 [Source:RGD Symbol%3BAcc:1332662]
rn6_v1_chr3_-_152259156_152259156	0.244345	Sox6_Sox9	ENSRNOT00000065729|LOC100910882|ENSRNOG00000049814|RNA-binding protein 39-like [Source:RGD Symbol%3BAcc:6496028]
rn6_v1_chr8_-_119219232_119219232	0.207907	Sox6_Sox9	ENSRNOT00000040840|Tdgf1|ENSRNOG00000037171|teratocarcinoma-derived growth factor 1 [Source:RGD Symbol%3BAcc:1594185]
rn6_v1_chr1_+_188288738_188288738	0.186849	Sox6_Sox9	ENSRNOT00000055103|Tmc5|ENSRNOG00000036760|transmembrane channel-like 5 [Source:RGD Symbol%3BAcc:1307037]
rn6_v1_chr11_+_28945575_28945587	0.182297	Sox6_Sox9	ENSRNOT00000061600|AABR07033579.3|ENSRNOG00000061897|	ENSRNOT00000090364|AABR07033579.3|ENSRNOG00000061897|
rn6_v1_chr6_-_99214251_99214251	0.168645	Sox6_Sox9	ENSRNOT00000042682|Esr2|ENSRNOG00000005343|estrogen receptor 2 [Source:RGD Symbol%3BAcc:2582]
rn6_v1_chr1_-_71955646_71955646	0.167898	Sox6_Sox9	ENSRNOT00000064246|Vom1r34|ENSRNOG00000049710|vomeronasal 1 receptor 34 [Source:RGD Symbol%3BAcc:1359300]
rn6_v1_chr4_+_68656928_68656928	0.161918	Sox6_Sox9	ENSRNOT00000016232|Tas2r108|ENSRNOG00000012195|taste receptor%2C type 2%2C member 108 [Source:RGD Symbol%3BAcc:1561194]
rn6_v1_chr10_-_11760620_11760620	0.157459	Sox6_Sox9	ENSRNOT00000009283|Dnase1|ENSRNOG00000006873|deoxyribonuclease 1 [Source:RGD Symbol%3BAcc:2510]
rn6_v1_chr1_+_85143789_85143789	0.123009	Sox6_Sox9	ENSRNOT00000071691|Acp7|ENSRNOG00000047901|acid phosphatase 7%2C tartrate resistant [Source:RGD Symbol%3BAcc:1585399]
rn6_v1_chr13_-_72789841_72789841	0.122733	Sox6_Sox9	ENSRNOT00000004694|Mr1|ENSRNOG00000003522|major histocompatibility complex%2C class I-related [Source:RGD Symbol%3BAcc:1593291]
rn6_v1_chr14_-_64535170_64535170	0.11188	Sox6_Sox9	ENSRNOT00000082338|Gba3|ENSRNOG00000024634|glucosidase%2C beta%2C acid 3 [Source:RGD Symbol%3BAcc:1309539]
rn6_v1_chr13_-_35858390_35858390	0.0542116	Sox6_Sox9	ENSRNOT00000003568|Ptpn4|ENSRNOG00000002625|protein tyrosine phosphatase%2C non-receptor type 4 [Source:RGD Symbol%3BAcc:620712]
rn6_v1_chr3_+_102841615_102841615	0.0131128	Sox6_Sox9	ENSRNOT00000075178|Olr770|ENSRNOG00000047449|olfactory receptor 770 [Source:RGD Symbol%3BAcc:1332807]
rn6_v1_chr7_-_18612118_18612147	0.0124476	Sox6_Sox9	ENSRNOT00000078122|Rab11b|ENSRNOG00000007648|RAB11B%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:68369]	ENSRNOT00000010197|Rab11b|ENSRNOG00000007648|RAB11B%2C member RAS oncogene family [Source:RGD Symbol%3BAcc:68369]
rn6_v1_chr1_+_255040426_255040426	0.00372166	Sox6_Sox9	ENSRNOT00000092151|Pcgf5|ENSRNOG00000018532|polycomb group ring finger 5 [Source:RGD Symbol%3BAcc:1583513]
