Illumina Body Map 2, young vs old
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ATF5 | hg19_v2_chr19_+_50433476_50433510 | -0.33 | 6.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_-_52612705 Show fit | 6.28 |
ENST00000434986.2
|
breast carcinoma amplified sequence 1 |
|
chr20_-_52612468 Show fit | 4.98 |
ENST00000422805.1
|
breast carcinoma amplified sequence 1 |
|
chr14_+_23846210 Show fit | 4.00 |
ENST00000339180.4
ENST00000342473.4 ENST00000397227.3 ENST00000555731.1 |
CKLF-like MARVEL transmembrane domain containing 5 |
|
chr14_+_23846328 Show fit | 3.52 |
ENST00000382809.2
|
CKLF-like MARVEL transmembrane domain containing 5 |
|
chr14_+_23845995 Show fit | 3.44 |
ENST00000359320.3
|
CKLF-like MARVEL transmembrane domain containing 5 |
|
chr5_+_175223313 Show fit | 2.86 |
ENST00000359546.4
|
complexin 2 |
|
chr5_+_156887027 Show fit | 2.79 |
ENST00000435489.2
ENST00000311946.7 |
NIPA-like domain containing 4 |
|
chr2_-_87017985 Show fit | 2.77 |
ENST00000352580.3
|
CD8a molecule |
|
chr2_-_87018784 Show fit | 2.69 |
ENST00000283635.3
ENST00000538832.1 |
CD8a molecule |
|
chr14_+_92789498 Show fit | 2.42 |
ENST00000531433.1
|
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.8 | GO:0045662 | negative regulation of myoblast differentiation(GO:0045662) |
1.1 | 5.5 | GO:0045065 | cytotoxic T cell differentiation(GO:0045065) |
0.0 | 5.0 | GO:0007188 | adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188) |
0.4 | 4.5 | GO:0051581 | negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612) |
0.1 | 4.3 | GO:0006607 | NLS-bearing protein import into nucleus(GO:0006607) |
0.6 | 4.2 | GO:0099525 | presynaptic dense core granule exocytosis(GO:0099525) |
0.2 | 4.2 | GO:0032287 | peripheral nervous system myelin maintenance(GO:0032287) |
0.3 | 4.0 | GO:0070970 | interleukin-2 secretion(GO:0070970) |
0.1 | 3.8 | GO:0031915 | positive regulation of synaptic plasticity(GO:0031915) |
1.2 | 3.5 | GO:0002372 | myeloid dendritic cell cytokine production(GO:0002372) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.0 | GO:0098793 | presynapse(GO:0098793) |
0.2 | 9.5 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.0 | 7.4 | GO:0043197 | dendritic spine(GO:0043197) |
0.0 | 5.1 | GO:0014069 | postsynaptic density(GO:0014069) postsynaptic specialization(GO:0099572) |
0.0 | 3.9 | GO:0055037 | recycling endosome(GO:0055037) |
0.4 | 3.8 | GO:0070033 | synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033) synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex(GO:0070554) |
0.1 | 3.1 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
0.0 | 2.7 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 2.3 | GO:0043198 | dendritic shaft(GO:0043198) |
0.0 | 2.3 | GO:0097542 | ciliary tip(GO:0097542) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.2 | GO:0005125 | cytokine activity(GO:0005125) |
0.1 | 5.5 | GO:0042288 | MHC class I protein binding(GO:0042288) |
0.1 | 4.8 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.2 | 4.0 | GO:0050700 | CARD domain binding(GO:0050700) |
0.1 | 3.5 | GO:0009931 | calcium-dependent protein serine/threonine kinase activity(GO:0009931) |
0.1 | 3.5 | GO:0005086 | ARF guanyl-nucleotide exchange factor activity(GO:0005086) |
0.5 | 3.2 | GO:0023030 | MHC class Ib protein complex binding(GO:0023025) MHC class Ib protein binding, via antigen binding groove(GO:0023030) |
0.2 | 3.1 | GO:0004971 | AMPA glutamate receptor activity(GO:0004971) |
0.0 | 3.0 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.0 | 2.8 | GO:0005262 | calcium channel activity(GO:0005262) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.5 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.1 | 4.3 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
0.0 | 3.5 | PID PI3K PLC TRK PATHWAY | Trk receptor signaling mediated by PI3K and PLC-gamma |
0.1 | 2.7 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 2.7 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.7 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 1.6 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 1.6 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.6 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.3 | ST GA12 PATHWAY | G alpha 12 Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.8 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 5.3 | REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS | Genes involved in Trafficking of GluR2-containing AMPA receptors |
0.0 | 4.7 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.1 | 4.5 | REACTOME CA DEPENDENT EVENTS | Genes involved in Ca-dependent events |
0.1 | 4.3 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |
0.1 | 4.0 | REACTOME DOWNSTREAM TCR SIGNALING | Genes involved in Downstream TCR signaling |
0.1 | 2.7 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.4 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 2.2 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |
0.0 | 2.2 | REACTOME KINESINS | Genes involved in Kinesins |