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Illumina Body Map 2: averaged replicates

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Results for CCUUGGC

Z-value: 0.20

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miRNA associated with seed CCUUGGC

NamemiRBASE accession
hsa-miR-212-5p
MIMAT0022695

Activity profile of CCUUGGC motif

Sorted Z-values of CCUUGGC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr6_-_139613269 0.11 ENST00000358430.3
TXLNB
taxilin beta
chrY_+_15016725 0.11 ENST00000336079.3
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr17_+_4487294 0.10 ENST00000338859.4
SMTNL2
smoothelin-like 2
chr1_-_51763661 0.09 ENST00000530004.1
TTC39A
tetratricopeptide repeat domain 39A
chr16_-_75150665 0.09 ENST00000300051.4
ENST00000450168.2
LDHD
lactate dehydrogenase D
chr1_+_214161272 0.08 ENST00000498508.2
ENST00000366958.4
PROX1
prospero homeobox 1
chr1_-_33338076 0.07 ENST00000496770.1
FNDC5
fibronectin type III domain containing 5
chr3_+_52017454 0.07 ENST00000476854.1
ENST00000476351.1
ENST00000494103.1
ENST00000404366.2
ENST00000469863.1
ACY1
aminoacylase 1
chr1_-_119532127 0.06 ENST00000207157.3
TBX15
T-box 15
chr2_+_219472488 0.06 ENST00000450993.2
PLCD4
phospholipase C, delta 4
chr2_-_40679186 0.06 ENST00000406785.2
SLC8A1
solute carrier family 8 (sodium/calcium exchanger), member 1
chr14_-_35182994 0.06 ENST00000341223.3
CFL2
cofilin 2 (muscle)
chr2_+_241375069 0.05 ENST00000264039.2
GPC1
glypican 1
chrX_+_49687216 0.05 ENST00000376088.3
CLCN5
chloride channel, voltage-sensitive 5
chr17_+_45608430 0.05 ENST00000322157.4
NPEPPS
aminopeptidase puromycin sensitive
chr5_-_37839782 0.05 ENST00000326524.2
ENST00000515058.1
GDNF
glial cell derived neurotrophic factor
chr7_+_116312411 0.05 ENST00000456159.1
ENST00000397752.3
ENST00000318493.6
MET
met proto-oncogene
chr18_+_13218769 0.05 ENST00000399848.3
ENST00000361205.4
LDLRAD4
low density lipoprotein receptor class A domain containing 4
chr1_-_47134101 0.05 ENST00000576409.1
ATPAF1
ATP synthase mitochondrial F1 complex assembly factor 1
chr12_-_118797475 0.04 ENST00000541786.1
ENST00000419821.2
ENST00000541878.1
TAOK3
TAO kinase 3
chr2_-_220094294 0.04 ENST00000436856.1
ENST00000428226.1
ENST00000409422.1
ENST00000431715.1
ENST00000457841.1
ENST00000439812.1
ENST00000361242.4
ENST00000396761.2
ATG9A
autophagy related 9A
chr19_+_7953384 0.04 ENST00000306708.6
LRRC8E
leucine rich repeat containing 8 family, member E
chr2_+_219264466 0.04 ENST00000273062.2
CTDSP1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chr16_-_46865047 0.04 ENST00000394806.2
C16orf87
chromosome 16 open reading frame 87
chr4_+_6784401 0.04 ENST00000425103.1
ENST00000307659.5
KIAA0232
KIAA0232
chr7_-_74867509 0.04 ENST00000426327.3
GATSL2
GATS protein-like 2
chr8_-_66754172 0.04 ENST00000401827.3
PDE7A
phosphodiesterase 7A
chr1_-_214724566 0.04 ENST00000366956.5
PTPN14
protein tyrosine phosphatase, non-receptor type 14
chr3_+_57261743 0.04 ENST00000288266.3
APPL1
adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
chr7_+_140774032 0.04 ENST00000565468.1
TMEM178B
transmembrane protein 178B
chr1_+_61547894 0.04 ENST00000403491.3
NFIA
nuclear factor I/A
chr3_-_53880401 0.04 ENST00000315251.6
CHDH
choline dehydrogenase
chr2_-_96874553 0.04 ENST00000337288.5
ENST00000443962.1
STARD7
StAR-related lipid transfer (START) domain containing 7
chr16_-_71610985 0.04 ENST00000355962.4
TAT
tyrosine aminotransferase
chr20_-_48099182 0.04 ENST00000371741.4
KCNB1
potassium voltage-gated channel, Shab-related subfamily, member 1
chr5_+_139927213 0.03 ENST00000310331.2
EIF4EBP3
eukaryotic translation initiation factor 4E binding protein 3
chr1_-_117664317 0.03 ENST00000256649.4
ENST00000369464.3
ENST00000485032.1
TRIM45
tripartite motif containing 45
chr2_+_85981008 0.03 ENST00000306279.3
ATOH8
atonal homolog 8 (Drosophila)
chr3_-_114790179 0.03 ENST00000462705.1
ZBTB20
zinc finger and BTB domain containing 20
chr11_-_64546202 0.03 ENST00000377390.3
ENST00000227503.9
ENST00000377394.3
ENST00000422298.2
ENST00000334944.5
SF1
splicing factor 1
chr13_-_50367057 0.03 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr1_+_145611010 0.03 ENST00000369291.5
RNF115
ring finger protein 115
chr6_+_50786414 0.03 ENST00000344788.3
ENST00000393655.3
ENST00000263046.4
TFAP2B
transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
chrX_+_152953505 0.03 ENST00000253122.5
SLC6A8
solute carrier family 6 (neurotransmitter transporter), member 8
chr1_-_23886285 0.03 ENST00000374561.5
ID3
inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
chr15_+_96873921 0.03 ENST00000394166.3
NR2F2
nuclear receptor subfamily 2, group F, member 2
chr10_+_72164135 0.03 ENST00000373218.4
EIF4EBP2
eukaryotic translation initiation factor 4E binding protein 2
chr6_-_99395787 0.03 ENST00000369244.2
ENST00000229971.1
FBXL4
F-box and leucine-rich repeat protein 4
chr3_-_156272872 0.03 ENST00000476217.1
SSR3
signal sequence receptor, gamma (translocon-associated protein gamma)
chr15_+_44829255 0.02 ENST00000261868.5
ENST00000424492.3
EIF3J
eukaryotic translation initiation factor 3, subunit J
chr5_-_137878887 0.02 ENST00000507939.1
ENST00000572514.1
ENST00000499810.2
ENST00000360541.5
ETF1
eukaryotic translation termination factor 1
chr5_-_127873659 0.02 ENST00000262464.4
FBN2
fibrillin 2
chr2_+_46769798 0.02 ENST00000238738.4
RHOQ
ras homolog family member Q
chr3_-_138553594 0.02 ENST00000477593.1
ENST00000483968.1
PIK3CB
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
chr1_+_178995021 0.02 ENST00000263733.4
FAM20B
family with sequence similarity 20, member B
chr19_+_42724423 0.02 ENST00000301215.3
ENST00000597945.1
ZNF526
zinc finger protein 526
chr9_+_33817461 0.02 ENST00000263228.3
UBE2R2
ubiquitin-conjugating enzyme E2R 2
chr7_-_45960850 0.02 ENST00000381083.4
ENST00000381086.5
ENST00000275521.6
IGFBP3
insulin-like growth factor binding protein 3
chr16_-_18937726 0.02 ENST00000389467.3
ENST00000446231.2
SMG1
SMG1 phosphatidylinositol 3-kinase-related kinase
chr1_+_25757376 0.02 ENST00000399766.3
ENST00000399763.3
ENST00000374343.4
TMEM57
transmembrane protein 57
chr1_-_150979333 0.02 ENST00000312210.5
FAM63A
family with sequence similarity 63, member A
chr8_-_124054587 0.02 ENST00000259512.4
DERL1
derlin 1
chr9_+_124413873 0.02 ENST00000408936.3
DAB2IP
DAB2 interacting protein
chr1_-_6761855 0.02 ENST00000426784.1
ENST00000377573.5
ENST00000377577.5
ENST00000294401.7
DNAJC11
DnaJ (Hsp40) homolog, subfamily C, member 11
chr6_+_57182400 0.02 ENST00000607273.1
PRIM2
primase, DNA, polypeptide 2 (58kDa)
chr7_+_127292234 0.02 ENST00000354725.3
SND1
staphylococcal nuclease and tudor domain containing 1
chr2_-_208634287 0.02 ENST00000295417.3
FZD5
frizzled family receptor 5
chr5_+_176560742 0.02 ENST00000439151.2
NSD1
nuclear receptor binding SET domain protein 1
chr3_+_38495333 0.02 ENST00000352511.4
ACVR2B
activin A receptor, type IIB
chr9_-_34126730 0.02 ENST00000361264.4
DCAF12
DDB1 and CUL4 associated factor 12
chr12_+_120972147 0.02 ENST00000325954.4
ENST00000542438.1
RNF10
ring finger protein 10
chr10_+_111967345 0.02 ENST00000332674.5
ENST00000453116.1
MXI1
MAX interactor 1, dimerization protein
chr17_+_38599693 0.02 ENST00000542955.1
ENST00000269593.4
IGFBP4
insulin-like growth factor binding protein 4
chr5_+_139781445 0.02 ENST00000532219.1
ENST00000394722.3
ANKHD1-EIF4EBP3
ANKHD1
ANKHD1-EIF4EBP3 readthrough
ankyrin repeat and KH domain containing 1
chr18_+_42260861 0.02 ENST00000282030.5
SETBP1
SET binding protein 1
chr15_-_90777277 0.02 ENST00000328649.6
CIB1
calcium and integrin binding 1 (calmyrin)
chr11_+_7273181 0.02 ENST00000318881.6
SYT9
synaptotagmin IX
chr2_-_85555385 0.02 ENST00000377386.3
TGOLN2
trans-golgi network protein 2
chr9_+_116638562 0.01 ENST00000374126.5
ENST00000288466.7
ZNF618
zinc finger protein 618
chr17_-_62207485 0.01 ENST00000433197.3
ERN1
endoplasmic reticulum to nucleus signaling 1
chr3_+_30648066 0.01 ENST00000359013.4
TGFBR2
transforming growth factor, beta receptor II (70/80kDa)
chr11_+_75526212 0.01 ENST00000356136.3
UVRAG
UV radiation resistance associated
chr3_+_188889737 0.01 ENST00000345063.3
TPRG1
tumor protein p63 regulated 1
chr2_+_85766280 0.01 ENST00000306434.3
MAT2A
methionine adenosyltransferase II, alpha
chr16_-_89007491 0.01 ENST00000327483.5
ENST00000564416.1
CBFA2T3
core-binding factor, runt domain, alpha subunit 2; translocated to, 3
chr1_+_26517052 0.01 ENST00000338855.2
ENST00000456354.2
CATSPER4
cation channel, sperm associated 4
chr10_-_74114714 0.01 ENST00000338820.3
ENST00000394903.2
ENST00000444643.2
DNAJB12
DnaJ (Hsp40) homolog, subfamily B, member 12
chr10_-_105677886 0.01 ENST00000224950.3
OBFC1
oligonucleotide/oligosaccharide-binding fold containing 1
chr3_-_118864893 0.01 ENST00000354673.2
ENST00000425327.2
IGSF11
immunoglobulin superfamily, member 11
chr8_+_76452097 0.01 ENST00000396423.2
HNF4G
hepatocyte nuclear factor 4, gamma
chr11_+_120207787 0.01 ENST00000397843.2
ENST00000356641.3
ARHGEF12
Rho guanine nucleotide exchange factor (GEF) 12
chr3_+_183873098 0.01 ENST00000313143.3
DVL3
dishevelled segment polarity protein 3
chr2_-_96931679 0.01 ENST00000258439.3
ENST00000432959.1
TMEM127
transmembrane protein 127
chr1_-_40105617 0.01 ENST00000372852.3
HEYL
hes-related family bHLH transcription factor with YRPW motif-like
chr17_-_60142609 0.01 ENST00000397786.2
MED13
mediator complex subunit 13
chr1_+_117602925 0.01 ENST00000369466.4
TTF2
transcription termination factor, RNA polymerase II
chr16_+_50775948 0.01 ENST00000569681.1
ENST00000569418.1
ENST00000540145.1
CYLD
cylindromatosis (turban tumor syndrome)
chr15_-_59665062 0.01 ENST00000288235.4
MYO1E
myosin IE
chr17_+_28804380 0.01 ENST00000225724.5
ENST00000451249.2
ENST00000467337.2
ENST00000581721.1
ENST00000414833.2
GOSR1
golgi SNAP receptor complex member 1
chr17_+_47572647 0.01 ENST00000172229.3
NGFR
nerve growth factor receptor
chr9_-_110251836 0.01 ENST00000374672.4
KLF4
Kruppel-like factor 4 (gut)
chr4_-_146859623 0.01 ENST00000379448.4
ENST00000513320.1
ZNF827
zinc finger protein 827
chr5_-_107006596 0.01 ENST00000333274.6
EFNA5
ephrin-A5
chr16_-_2264779 0.01 ENST00000333503.7
PGP
phosphoglycolate phosphatase
chrX_+_41192595 0.01 ENST00000399959.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr8_-_81083731 0.01 ENST00000379096.5
TPD52
tumor protein D52
chr6_+_41514078 0.01 ENST00000373063.3
ENST00000373060.1
FOXP4
forkhead box P4
chr21_+_33245548 0.01 ENST00000270112.2
HUNK
hormonally up-regulated Neu-associated kinase
chr7_+_44788430 0.01 ENST00000457123.1
ENST00000309315.4
ZMIZ2
zinc finger, MIZ-type containing 2
chr2_+_192542850 0.01 ENST00000410026.2
NABP1
nucleic acid binding protein 1
chr14_+_23775971 0.01 ENST00000250405.5
BCL2L2
BCL2-like 2
chr2_+_61108650 0.01 ENST00000295025.8
REL
v-rel avian reticuloendotheliosis viral oncogene homolog
chr13_-_79177673 0.01 ENST00000377208.5
POU4F1
POU class 4 homeobox 1
chr1_-_89591749 0.01 ENST00000370466.3
GBP2
guanylate binding protein 2, interferon-inducible
chr2_+_168725458 0.01 ENST00000392690.3
B3GALT1
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
chr8_+_37594130 0.01 ENST00000518526.1
ENST00000523887.1
ENST00000276461.5
ERLIN2
ER lipid raft associated 2
chr10_-_131762105 0.01 ENST00000368648.3
ENST00000355311.5
EBF3
early B-cell factor 3
chr22_+_29168652 0.01 ENST00000249064.4
ENST00000444523.1
ENST00000448492.2
ENST00000421503.2
CCDC117
coiled-coil domain containing 117
chr9_-_20622478 0.01 ENST00000355930.6
ENST00000380338.4
MLLT3
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
chr13_+_95254085 0.01 ENST00000376958.4
GPR180
G protein-coupled receptor 180
chr1_+_33207381 0.01 ENST00000401073.2
KIAA1522
KIAA1522
chr12_+_56137064 0.01 ENST00000257868.5
ENST00000546799.1
GDF11
growth differentiation factor 11
chr12_-_58240470 0.01 ENST00000548823.1
ENST00000398073.2
CTDSP2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
chr1_+_145507587 0.01 ENST00000330165.8
ENST00000369307.3
RBM8A
RNA binding motif protein 8A
chr2_-_27938593 0.01 ENST00000379677.2
AC074091.13
Uncharacterized protein
chr4_-_87855851 0.01 ENST00000473559.1
C4orf36
chromosome 4 open reading frame 36
chr14_+_90863327 0.01 ENST00000356978.4
CALM1
calmodulin 1 (phosphorylase kinase, delta)
chr17_+_8213590 0.01 ENST00000361926.3
ARHGEF15
Rho guanine nucleotide exchange factor (GEF) 15
chr8_-_8751068 0.01 ENST00000276282.6
MFHAS1
malignant fibrous histiocytoma amplified sequence 1
chr9_-_35665165 0.01 ENST00000343259.3
ENST00000378387.3
ARHGEF39
Rho guanine nucleotide exchange factor (GEF) 39
chr11_+_34127142 0.00 ENST00000257829.3
ENST00000531159.2
NAT10
N-acetyltransferase 10 (GCN5-related)
chr1_-_249120832 0.00 ENST00000366472.5
SH3BP5L
SH3-binding domain protein 5-like
chr11_+_61447845 0.00 ENST00000257215.5
DAGLA
diacylglycerol lipase, alpha
chr17_+_38278530 0.00 ENST00000398532.4
MSL1
male-specific lethal 1 homolog (Drosophila)
chr19_+_926000 0.00 ENST00000263620.3
ARID3A
AT rich interactive domain 3A (BRIGHT-like)
chr8_+_128426535 0.00 ENST00000465342.2
POU5F1B
POU class 5 homeobox 1B
chr15_-_35261996 0.00 ENST00000156471.5
AQR
aquarius intron-binding spliceosomal factor
chr15_+_75118888 0.00 ENST00000395018.4
CPLX3
complexin 3
chr5_+_109025067 0.00 ENST00000261483.4
MAN2A1
mannosidase, alpha, class 2A, member 1
chr1_+_54519242 0.00 ENST00000234827.1
TCEANC2
transcription elongation factor A (SII) N-terminal and central domain containing 2
chr12_+_70636765 0.00 ENST00000552231.1
ENST00000229195.3
ENST00000547780.1
ENST00000418359.3
CNOT2
CCR4-NOT transcription complex, subunit 2
chr14_+_103851712 0.00 ENST00000440884.3
ENST00000416682.2
ENST00000429436.2
ENST00000303622.9
MARK3
MAP/microtubule affinity-regulating kinase 3
chr20_+_33814457 0.00 ENST00000246186.6
MMP24
matrix metallopeptidase 24 (membrane-inserted)
chr1_+_11751748 0.00 ENST00000294485.5
DRAXIN
dorsal inhibitory axon guidance protein
chr3_-_33686743 0.00 ENST00000333778.6
ENST00000539981.1
CLASP2
cytoplasmic linker associated protein 2
chr17_+_47865917 0.00 ENST00000259021.4
ENST00000454930.2
ENST00000509773.1
ENST00000510819.1
ENST00000424009.2
KAT7
K(lysine) acetyltransferase 7

Network of associatons between targets according to the STRING database.

First level regulatory network of CCUUGGC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:2000979 hepatocyte cell migration(GO:0002194) otic placode formation(GO:0043049) branching involved in pancreas morphogenesis(GO:0061114) acinar cell differentiation(GO:0090425) positive regulation of forebrain neuron differentiation(GO:2000979)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0090571 RNA polymerase II transcription repressor complex(GO:0090571)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0016898 D-lactate dehydrogenase (cytochrome) activity(GO:0004458) oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor(GO:0016898)
0.0 0.0 GO:0080130 L-phenylalanine aminotransferase activity(GO:0070546) L-phenylalanine:2-oxoglutarate aminotransferase activity(GO:0080130)