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Illumina Body Map 2: averaged replicates
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Results for GGACGGA
Z-value: 0.14
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miRNA associated with seed GGACGGA
| Name | miRBASE accession |
|---|---|
|
hsa-miR-184
|
MIMAT0000454 |
Activity profile of GGACGGA motif
Sorted Z-values of GGACGGA motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_19229248 | 0.33 |
ENST00000375341.3
|
ALDH4A1
|
aldehyde dehydrogenase 4 family, member A1 |
| chr4_-_174451370 | 0.12 |
ENST00000359562.4
|
HAND2
|
heart and neural crest derivatives expressed 2 |
| chr1_-_57045228 | 0.11 |
ENST00000371250.3
|
PPAP2B
|
phosphatidic acid phosphatase type 2B |
| chr2_+_120770645 | 0.10 |
ENST00000443902.2
|
EPB41L5
|
erythrocyte membrane protein band 4.1 like 5 |
| chr12_+_121124599 | 0.07 |
ENST00000228506.3
|
MLEC
|
malectin |
| chr6_+_117996621 | 0.06 |
ENST00000368494.3
|
NUS1
|
nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) |
| chr11_-_64546202 | 0.05 |
ENST00000377390.3
ENST00000227503.9 ENST00000377394.3 ENST00000422298.2 ENST00000334944.5 |
SF1
|
splicing factor 1 |
| chr3_-_147124547 | 0.04 |
ENST00000491672.1
ENST00000383075.3 |
ZIC4
|
Zic family member 4 |
| chr11_+_117049445 | 0.04 |
ENST00000324225.4
ENST00000532960.1 |
SIDT2
|
SID1 transmembrane family, member 2 |
| chr8_-_141645645 | 0.04 |
ENST00000519980.1
ENST00000220592.5 |
AGO2
|
argonaute RISC catalytic component 2 |
| chr19_+_10982189 | 0.03 |
ENST00000327064.4
ENST00000588947.1 |
CARM1
|
coactivator-associated arginine methyltransferase 1 |
| chr19_+_3359561 | 0.03 |
ENST00000589123.1
ENST00000346156.5 ENST00000395111.3 ENST00000586919.1 |
NFIC
|
nuclear factor I/C (CCAAT-binding transcription factor) |
| chr1_+_224301787 | 0.02 |
ENST00000366862.5
ENST00000424254.2 |
FBXO28
|
F-box protein 28 |
| chr22_-_39268308 | 0.02 |
ENST00000407418.3
|
CBX6
|
chromobox homolog 6 |
| chr12_+_53574464 | 0.01 |
ENST00000416904.3
|
ZNF740
|
zinc finger protein 740 |
Network of associatons between targets according to the STRING database.
First level regulatory network of GGACGGA
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0019470 | 4-hydroxyproline catabolic process(GO:0019470) |
| 0.0 | 0.1 | GO:0061032 | cardiac right ventricle formation(GO:0003219) visceral serous pericardium development(GO:0061032) |
| 0.0 | 0.1 | GO:0007509 | mesoderm migration involved in gastrulation(GO:0007509) |
| 0.0 | 0.1 | GO:0016094 | polyprenol biosynthetic process(GO:0016094) |
| 0.0 | 0.0 | GO:0034970 | histone H3-R2 methylation(GO:0034970) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0003842 | 1-pyrroline-5-carboxylate dehydrogenase activity(GO:0003842) |
| 0.0 | 0.1 | GO:0045131 | pre-mRNA branch point binding(GO:0045131) |