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Illumina Body Map 2: averaged replicates

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Results for GGACGGA

Z-value: 0.14

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miRNA associated with seed GGACGGA

NamemiRBASE accession
MIMAT0000454

Activity profile of GGACGGA motif

Sorted Z-values of GGACGGA motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_19229248 0.33 ENST00000375341.3
aldehyde dehydrogenase 4 family, member A1
chr4_-_174451370 0.12 ENST00000359562.4
heart and neural crest derivatives expressed 2
chr1_-_57045228 0.11 ENST00000371250.3
phosphatidic acid phosphatase type 2B
chr2_+_120770645 0.10 ENST00000443902.2
erythrocyte membrane protein band 4.1 like 5
chr12_+_121124599 0.07 ENST00000228506.3
malectin
chr6_+_117996621 0.06 ENST00000368494.3
nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
chr11_-_64546202 0.05 ENST00000377390.3
ENST00000227503.9
ENST00000377394.3
ENST00000422298.2
ENST00000334944.5
splicing factor 1
chr3_-_147124547 0.04 ENST00000491672.1
ENST00000383075.3
Zic family member 4
chr11_+_117049445 0.04 ENST00000324225.4
ENST00000532960.1
SID1 transmembrane family, member 2
chr8_-_141645645 0.04 ENST00000519980.1
ENST00000220592.5
argonaute RISC catalytic component 2
chr19_+_10982189 0.03 ENST00000327064.4
ENST00000588947.1
coactivator-associated arginine methyltransferase 1
chr19_+_3359561 0.03 ENST00000589123.1
ENST00000346156.5
ENST00000395111.3
ENST00000586919.1
nuclear factor I/C (CCAAT-binding transcription factor)
chr1_+_224301787 0.02 ENST00000366862.5
ENST00000424254.2
F-box protein 28
chr22_-_39268308 0.02 ENST00000407418.3
chromobox homolog 6
chr12_+_53574464 0.01 ENST00000416904.3
zinc finger protein 740

Network of associatons between targets according to the STRING database.

First level regulatory network of GGACGGA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0019470 4-hydroxyproline catabolic process(GO:0019470)
0.0 0.1 GO:0061032 cardiac right ventricle formation(GO:0003219) visceral serous pericardium development(GO:0061032)
0.0 0.1 GO:0007509 mesoderm migration involved in gastrulation(GO:0007509)
0.0 0.1 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.0 GO:0034970 histone H3-R2 methylation(GO:0034970)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity(GO:0003842)
0.0 0.1 GO:0045131 pre-mRNA branch point binding(GO:0045131)