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Illumina Body Map 2: averaged replicates

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Results for UGCAGUC

Z-value: 0.56

Motif logo

miRNA associated with seed UGCAGUC

NamemiRBASE accession

Activity profile of UGCAGUC motif

Sorted Z-values of UGCAGUC motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_+_175223313 1.11 ENST00000359546.4
complexin 2
chr1_+_66999799 1.04 ENST00000371035.3
ENST00000371036.3
ENST00000371037.4
SH3-domain GRB2-like (endophilin) interacting protein 1
chr14_+_93389425 0.98 ENST00000216492.5
ENST00000334654.4
chromogranin A (parathyroid secretory protein 1)
chr2_-_2334888 0.83 ENST00000428368.2
ENST00000399161.2
myelin transcription factor 1-like
chr2_+_149632783 0.79 ENST00000435030.1
kinesin family member 5C
chr6_+_118228657 0.74 ENST00000360388.4
solute carrier family 35, member F1
chr17_-_78450398 0.67 ENST00000306773.4
neuronal pentraxin I
chr11_-_134281812 0.67 ENST00000392580.1
ENST00000312527.4
beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
chr7_-_44365020 0.64 ENST00000395747.2
ENST00000347193.4
ENST00000346990.4
ENST00000258682.6
ENST00000353625.4
ENST00000421607.1
ENST00000424197.1
ENST00000502837.2
ENST00000350811.3
ENST00000395749.2
calcium/calmodulin-dependent protein kinase II beta
chr21_+_22370608 0.62 ENST00000400546.1
neural cell adhesion molecule 2
chrX_-_154493791 0.62 ENST00000369454.3
RAB39B, member RAS oncogene family
chr3_-_164913777 0.61 ENST00000475390.1
SLIT and NTRK-like family, member 3
chr6_+_99282570 0.61 ENST00000328345.5
POU class 3 homeobox 2
chr3_+_68053359 0.59 ENST00000478136.1
family with sequence similarity 19 (chemokine (C-C motif)-like), member A1
chr7_+_140774032 0.59 ENST00000565468.1
transmembrane protein 178B
chr1_+_237205476 0.56 ENST00000366574.2
ryanodine receptor 2 (cardiac)
chr14_+_100150622 0.54 ENST00000261835.3
cytochrome P450, family 46, subfamily A, polypeptide 1
chr11_-_132813566 0.53 ENST00000331898.7
opioid binding protein/cell adhesion molecule-like
chr2_+_166326157 0.52 ENST00000421875.1
ENST00000314499.7
ENST00000409664.1
cysteine-serine-rich nuclear protein 3
chr16_+_29823552 0.51 ENST00000300797.6
proline-rich transmembrane protein 2
chr9_+_77112244 0.51 ENST00000376896.3
RAR-related orphan receptor B
chr15_-_83316254 0.49 ENST00000567678.1
ENST00000450751.2
cytoplasmic polyadenylation element binding protein 1
chr18_+_63418068 0.41 ENST00000397968.2
cadherin 7, type 2
chr20_+_62795827 0.40 ENST00000328439.1
ENST00000536311.1
myelin transcription factor 1
chr2_-_154335300 0.40 ENST00000325926.3
reprimo, TP53 dependent G2 arrest mediator candidate
chr14_-_63512154 0.39 ENST00000322893.7
potassium voltage-gated channel, subfamily H (eag-related), member 5
chr10_-_62149433 0.39 ENST00000280772.2
ankyrin 3, node of Ranvier (ankyrin G)
chr4_-_819901 0.38 ENST00000304062.6
complexin 1
chr5_+_167718604 0.37 ENST00000265293.4
WW and C2 domain containing 1
chrX_-_54384425 0.36 ENST00000375169.3
ENST00000354646.2
WNK lysine deficient protein kinase 3
chr20_+_56884752 0.36 ENST00000244040.3
RAB22A, member RAS oncogene family
chr12_+_110906169 0.36 ENST00000377673.5
family with sequence similarity 216, member A
chrX_+_107683096 0.35 ENST00000328300.6
ENST00000361603.2
collagen, type IV, alpha 5
chr20_-_14318248 0.33 ENST00000378053.3
ENST00000341420.4
fibronectin leucine rich transmembrane protein 3
chr10_-_88126224 0.32 ENST00000327946.7
glutamate receptor, ionotropic, delta 1
chr16_+_50582222 0.32 ENST00000268459.3
naked cuticle homolog 1 (Drosophila)
chr1_-_53793584 0.31 ENST00000354412.3
ENST00000347547.2
ENST00000306052.6
low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr8_-_114389353 0.31 ENST00000343508.3
CUB and Sushi multiple domains 3
chr5_+_152870106 0.30 ENST00000285900.5
glutamate receptor, ionotropic, AMPA 1
chr2_+_155554797 0.28 ENST00000295101.2
potassium inwardly-rectifying channel, subfamily J, member 3
chr11_-_70507901 0.27 ENST00000449833.2
ENST00000357171.3
ENST00000449116.2
SH3 and multiple ankyrin repeat domains 2
chr9_+_112403088 0.27 ENST00000448454.2
paralemmin 2
chr3_-_53880401 0.26 ENST00000315251.6
choline dehydrogenase
chr3_+_77088989 0.25 ENST00000461745.1
roundabout, axon guidance receptor, homolog 2 (Drosophila)
chr4_+_141294628 0.25 ENST00000512749.1
ENST00000608372.1
ENST00000506597.1
ENST00000394201.4
ENST00000510586.1
short coiled-coil protein
chr3_+_196295482 0.25 ENST00000440469.1
ENST00000311630.6
F-box protein 45
chr15_+_33603147 0.25 ENST00000415757.3
ENST00000389232.4
ryanodine receptor 3
chr6_-_46293378 0.25 ENST00000330430.6
regulator of calcineurin 2
chr2_-_69870835 0.23 ENST00000409085.4
ENST00000406297.3
AP2 associated kinase 1
chr1_-_205326022 0.23 ENST00000367155.3
kelch domain containing 8A
chr19_-_46476791 0.20 ENST00000263257.5
neuro-oncological ventral antigen 2
chr9_+_15553055 0.20 ENST00000380701.3
coiled-coil domain containing 171
chr7_+_119913688 0.19 ENST00000331113.4
potassium voltage-gated channel, Shal-related subfamily, member 2
chr18_+_55102917 0.18 ENST00000491143.2
one cut homeobox 2
chr1_-_70671216 0.16 ENST00000370952.3
leucine rich repeat containing 40
chr3_+_121903181 0.15 ENST00000498619.1
calcium-sensing receptor
chr20_+_42143053 0.15 ENST00000373135.3
ENST00000444063.1
l(3)mbt-like 1 (Drosophila)
chr2_-_148778258 0.14 ENST00000392857.5
ENST00000457954.1
ENST00000392858.1
ENST00000542387.1
origin recognition complex, subunit 4
chr1_-_217262969 0.14 ENST00000361525.3
estrogen-related receptor gamma
chr2_+_118846008 0.13 ENST00000245787.4
insulin induced gene 2
chr2_+_204192942 0.13 ENST00000295851.5
ENST00000261017.5
abl-interactor 2
chr1_-_43833628 0.13 ENST00000413844.2
ENST00000372458.3
ELOVL fatty acid elongase 1
chr1_-_57045228 0.12 ENST00000371250.3
phosphatidic acid phosphatase type 2B
chr15_+_66161871 0.10 ENST00000569896.1
RAB11A, member RAS oncogene family
chr1_-_23670817 0.10 ENST00000478691.1
heterogeneous nuclear ribonucleoprotein R
chr4_-_42659102 0.10 ENST00000264449.10
ENST00000510289.1
ENST00000381668.5
ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr8_+_9009202 0.09 ENST00000518496.1
Uncharacterized protein
chr12_-_16761007 0.09 ENST00000354662.1
ENST00000441439.2
LIM domain only 3 (rhombotin-like 2)
chr2_-_169104651 0.09 ENST00000355999.4
serine threonine kinase 39
chr2_-_54087066 0.08 ENST00000394705.2
ENST00000352846.3
ENST00000406625.2
G protein-coupled receptor 75
GPR75-ASB3 readthrough
Ankyrin repeat and SOCS box protein 3
chr12_-_91348949 0.08 ENST00000358859.2
coiled-coil glutamate-rich protein 1
chr14_+_94492674 0.08 ENST00000203664.5
ENST00000553723.1
OTU domain, ubiquitin aldehyde binding 2
chr1_+_87794150 0.08 ENST00000370544.5
LIM domain only 4
chr11_+_125496124 0.08 ENST00000533778.2
ENST00000534070.1
checkpoint kinase 1
chr7_+_91875508 0.08 ENST00000265742.3
ankyrin repeat and IBR domain containing 1
chr19_+_1000418 0.07 ENST00000234389.3
glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
chr10_-_47213626 0.07 ENST00000452145.2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 10
chr4_-_142053952 0.07 ENST00000515673.2
ring finger protein 150
chr3_-_114790179 0.07 ENST00000462705.1
zinc finger and BTB domain containing 20
chr15_+_49170083 0.07 ENST00000530028.2
EP300 interacting inhibitor of differentiation 1
chr10_-_75255724 0.06 ENST00000342558.3
ENST00000360663.5
ENST00000394829.2
ENST00000394828.2
ENST00000394822.2
protein phosphatase 3, catalytic subunit, beta isozyme
chr6_+_142468361 0.06 ENST00000367630.4
vesicle (multivesicular body) trafficking 1
chr6_+_4021554 0.06 ENST00000337659.6
pre-mRNA processing factor 4B
chr2_-_164592497 0.06 ENST00000333129.3
ENST00000409634.1
fidgetin
chrX_-_74145273 0.05 ENST00000055682.6
KIAA2022
chr3_+_180319918 0.05 ENST00000296015.4
ENST00000491380.1
ENST00000412756.2
ENST00000382584.4
tetratricopeptide repeat domain 14
chr16_-_4897266 0.05 ENST00000591451.1
ENST00000436648.5
ENST00000381983.3
ENST00000588297.1
ENST00000321919.9
glyoxylate reductase 1 homolog (Arabidopsis)
chr3_-_38835501 0.05 ENST00000449082.2
sodium channel, voltage-gated, type X, alpha subunit
chr16_-_66785699 0.04 ENST00000258198.2
dynein, cytoplasmic 1, light intermediate chain 2
chr14_-_35182994 0.04 ENST00000341223.3
cofilin 2 (muscle)
chr10_-_105615164 0.04 ENST00000355946.2
ENST00000369774.4
SH3 and PX domains 2A
chr3_+_93781728 0.04 ENST00000314622.4
NOP2/Sun domain family, member 3
chr1_+_233086326 0.04 ENST00000366628.5
ENST00000366627.4
nucleoside-triphosphatase, cancer-related
chr7_+_94139105 0.04 ENST00000297273.4
CAS1 domain containing 1
chr14_-_55878538 0.04 ENST00000247178.5
autophagy related 14
chr4_-_73434498 0.04 ENST00000286657.4
ADAM metallopeptidase with thrombospondin type 1 motif, 3
chr2_-_159313214 0.04 ENST00000409889.1
ENST00000283233.5
ENST00000536771.1
coiled-coil domain containing 148
chr1_+_82266053 0.03 ENST00000370715.1
ENST00000370713.1
ENST00000319517.6
ENST00000370717.2
ENST00000394879.1
ENST00000271029.4
ENST00000335786.5
latrophilin 2
chr9_-_123555655 0.03 ENST00000340778.5
ENST00000453291.1
ENST00000608872.1
F-box and WD repeat domain containing 2
chr15_+_38544476 0.03 ENST00000299084.4
sprouty-related, EVH1 domain containing 1
chr14_+_71108460 0.03 ENST00000256367.2
tetratricopeptide repeat domain 9
chr20_+_3451650 0.03 ENST00000262919.5
attractin
chr2_+_48010221 0.03 ENST00000234420.5
mutS homolog 6
chrX_-_110038990 0.03 ENST00000372045.1
ENST00000394797.4
chordin-like 1
chr17_-_73775839 0.03 ENST00000592643.1
ENST00000591890.1
ENST00000587171.1
ENST00000254810.4
ENST00000589599.1
H3 histone, family 3B (H3.3B)
chr17_-_42580738 0.03 ENST00000585614.1
ENST00000591680.1
ENST00000434000.1
ENST00000588554.1
ENST00000592154.1
G patch domain containing 8
chr5_-_32444828 0.02 ENST00000265069.8
zinc finger RNA binding protein
chr14_+_103243813 0.02 ENST00000560371.1
ENST00000347662.4
ENST00000392745.2
ENST00000539721.1
ENST00000560463.1
TNF receptor-associated factor 3
chr12_+_120933904 0.02 ENST00000550178.1
ENST00000550845.1
ENST00000549989.1
ENST00000552870.1
dynein, light chain, LC8-type 1
chr12_-_53893399 0.02 ENST00000267079.2
mitogen-activated protein kinase kinase kinase 12
chr12_+_104850740 0.02 ENST00000547956.1
ENST00000549260.1
ENST00000303694.5
carbohydrate (chondroitin 4) sulfotransferase 11
chr10_-_94003003 0.01 ENST00000412050.4
cytoplasmic polyadenylation element binding protein 3
chr7_+_28452130 0.01 ENST00000357727.2
cAMP responsive element binding protein 5
chr9_-_131790550 0.01 ENST00000372554.4
ENST00000372564.3
SH3-domain GRB2-like endophilin B2
chr10_+_48189612 0.01 ENST00000453919.1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 9
chr1_-_115880852 0.01 ENST00000369512.2
nerve growth factor (beta polypeptide)
chr4_+_170541660 0.01 ENST00000513761.1
ENST00000347613.4
chloride channel, voltage-sensitive 3
chr1_-_78444776 0.01 ENST00000370767.1
ENST00000421641.1
far upstream element (FUSE) binding protein 1
chr11_-_106889250 0.00 ENST00000526355.2
guanylate cyclase 1, soluble, alpha 2
chr3_-_11762202 0.00 ENST00000445411.1
ENST00000404339.1
ENST00000273038.3
vestigial like 4 (Drosophila)
chr4_-_99851766 0.00 ENST00000450253.2
eukaryotic translation initiation factor 4E
chr5_+_127419449 0.00 ENST00000262461.2
ENST00000343225.4
solute carrier family 12 (sodium/potassium/chloride transporter), member 2

Network of associatons between targets according to the STRING database.

First level regulatory network of UGCAGUC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:1901899 dense core granule biogenesis(GO:0061110) positive regulation of relaxation of cardiac muscle(GO:1901899) regulation of dense core granule biogenesis(GO:2000705)
0.2 0.6 GO:0003220 left ventricular cardiac muscle tissue morphogenesis(GO:0003220)
0.1 0.4 GO:2000686 regulation of rubidium ion transmembrane transporter activity(GO:2000686)
0.1 1.0 GO:2000253 positive regulation of feeding behavior(GO:2000253)
0.1 0.3 GO:0019285 glycine betaine biosynthetic process from choline(GO:0019285) glycine betaine metabolic process(GO:0031455) glycine betaine biosynthetic process(GO:0031456)
0.1 0.4 GO:1900827 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.1 0.3 GO:0007525 somatic muscle development(GO:0007525)
0.1 0.3 GO:0038026 reelin-mediated signaling pathway(GO:0038026)
0.1 0.5 GO:0035881 amacrine cell differentiation(GO:0035881)
0.1 0.6 GO:0021869 forebrain ventricular zone progenitor cell division(GO:0021869)
0.0 0.7 GO:0060385 axonogenesis involved in innervation(GO:0060385)
0.0 0.3 GO:0061364 negative regulation of negative chemotaxis(GO:0050925) apoptotic process involved in luteolysis(GO:0061364)
0.0 1.1 GO:0031915 positive regulation of synaptic plasticity(GO:0031915)
0.0 0.4 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.0 0.6 GO:0090129 positive regulation of synapse maturation(GO:0090129)
0.0 0.5 GO:0006707 cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127)
0.0 0.2 GO:0021800 cerebral cortex tangential migration(GO:0021800)
0.0 0.2 GO:0071286 cellular response to magnesium ion(GO:0071286)
0.0 0.5 GO:2000766 negative regulation of cytoplasmic translation(GO:2000766)
0.0 0.3 GO:0099566 regulation of postsynaptic cytosolic calcium ion concentration(GO:0099566)
0.0 0.4 GO:0035331 negative regulation of hippo signaling(GO:0035331)
0.0 0.5 GO:0050884 neuromuscular process controlling posture(GO:0050884)
0.0 0.1 GO:0061091 regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092)
0.0 0.3 GO:0098914 membrane repolarization during atrial cardiac muscle cell action potential(GO:0098914)
0.0 0.6 GO:0007158 neuron cell-cell adhesion(GO:0007158)
0.0 0.3 GO:0003344 pericardium morphogenesis(GO:0003344)
0.0 0.8 GO:0048665 neuron fate specification(GO:0048665)
0.0 0.3 GO:0061635 regulation of protein complex stability(GO:0061635)
0.0 0.1 GO:0010796 regulation of multivesicular body size(GO:0010796)
0.0 0.7 GO:0008045 motor neuron axon guidance(GO:0008045)
0.0 0.1 GO:0021514 ventral spinal cord interneuron differentiation(GO:0021514)
0.0 0.3 GO:0038063 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063)
0.0 0.0 GO:0002101 tRNA wobble cytosine modification(GO:0002101)
0.0 0.1 GO:0035407 histone H3-T11 phosphorylation(GO:0035407)
0.0 0.7 GO:0050650 chondroitin sulfate proteoglycan biosynthetic process(GO:0050650)
0.0 0.5 GO:0008038 neuron recognition(GO:0008038)
0.0 0.1 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.5 GO:0070554 synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex(GO:0070554)
0.0 0.8 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.3 GO:0044308 axonal spine(GO:0044308)
0.0 1.1 GO:0042583 chromaffin granule(GO:0042583)
0.0 0.3 GO:0005587 collagen type IV trimer(GO:0005587)
0.0 1.0 GO:0030122 AP-2 adaptor complex(GO:0030122)
0.0 0.1 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)
0.0 0.6 GO:0014701 junctional sarcoplasmic reticulum membrane(GO:0014701)
0.0 0.3 GO:0005883 neurofilament(GO:0005883)
0.0 0.1 GO:0098837 postsynaptic recycling endosome(GO:0098837)
0.0 0.5 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.9 GO:0033017 sarcoplasmic reticulum membrane(GO:0033017)
0.0 0.4 GO:0014731 spectrin-associated cytoskeleton(GO:0014731)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0048763 calcium-induced calcium release activity(GO:0048763)
0.1 0.7 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 0.3 GO:0038025 reelin receptor activity(GO:0038025)
0.0 0.1 GO:0032093 SAM domain binding(GO:0032093)
0.0 0.4 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.0 0.3 GO:0086089 voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization(GO:0086089)
0.0 0.2 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0 0.3 GO:0030160 GKAP/Homer scaffold activity(GO:0030160)
0.0 0.3 GO:0099583 neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential(GO:0099529) neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration(GO:0099583) transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1904315)
0.0 1.5 GO:0017075 syntaxin-1 binding(GO:0017075)
0.0 0.3 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.3 GO:0019869 chloride channel inhibitor activity(GO:0019869)
0.0 0.1 GO:0035034 histone acetyltransferase regulator activity(GO:0035034)
0.0 0.7 GO:0031489 myosin V binding(GO:0031489)
0.0 0.2 GO:0005250 A-type (transient outward) potassium channel activity(GO:0005250)
0.0 0.8 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.5 GO:0035925 mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.0 0.2 GO:0035612 AP-2 adaptor complex binding(GO:0035612)
0.0 0.3 GO:0045499 chemorepellent activity(GO:0045499)
0.0 0.1 GO:0035402 histone kinase activity (H3-T11 specific)(GO:0035402)
0.0 0.5 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.4 GO:0005234 extracellular-glutamate-gated ion channel activity(GO:0005234)
0.0 0.1 GO:0009922 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.1 GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity(GO:0004616)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol
0.0 0.9 REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION Genes involved in Unblocking of NMDA receptor, glutamate binding and activation
0.0 0.6 REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis