Project
Illumina Body Map 2
Navigation
Downloads
Results for CCCUGAG
Z-value: 0.95
Motif logo
miRNA associated with seed CCCUGAG
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr15_-_90358048 Show fit | 3.04 |
ENST00000300060.6
ENST00000560137.1 |
alanyl (membrane) aminopeptidase |
|
| chr6_-_24911195 Show fit | 2.51 |
ENST00000259698.4
|
family with sequence similarity 65, member B |
|
| chr17_-_61777459 Show fit | 2.44 |
ENST00000578993.1
ENST00000583211.1 ENST00000259006.3 |
LIM domain containing 2 |
|
| chr5_-_100238956 Show fit | 2.37 |
ENST00000231461.5
|
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 |
|
| chr15_+_81489213 Show fit | 2.31 |
ENST00000559383.1
ENST00000394660.2 |
interleukin 16 |
|
| chr17_-_76713100 Show fit | 2.27 |
ENST00000585509.1
|
cytohesin 1 |
|
| chr3_-_13461807 Show fit | 2.27 |
ENST00000254508.5
|
nucleoporin 210kDa |
|
| chr3_+_47021168 Show fit | 2.17 |
ENST00000450053.3
ENST00000292309.5 ENST00000383740.2 |
neurobeachin-like 2 |
|
| chr1_+_12227035 Show fit | 2.14 |
ENST00000376259.3
ENST00000536782.1 |
tumor necrosis factor receptor superfamily, member 1B |
|
| chr3_+_186648274 Show fit | 2.07 |
ENST00000169298.3
|
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of CCCUGAG
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 2.7 | GO:2000134 | negative regulation of G1/S transition of mitotic cell cycle(GO:2000134) |
| 0.0 | 2.5 | GO:0006409 | tRNA export from nucleus(GO:0006409) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431) |
| 0.1 | 2.4 | GO:0001574 | ganglioside biosynthetic process(GO:0001574) |
| 0.1 | 2.4 | GO:0030220 | platelet formation(GO:0030220) |
| 0.1 | 2.3 | GO:0045779 | negative regulation of bone resorption(GO:0045779) |
| 0.1 | 2.3 | GO:0050930 | induction of positive chemotaxis(GO:0050930) |
| 0.1 | 2.3 | GO:0032012 | regulation of ARF protein signal transduction(GO:0032012) |
| 0.1 | 2.1 | GO:0051044 | positive regulation of membrane protein ectodomain proteolysis(GO:0051044) |
| 0.1 | 2.1 | GO:0006054 | N-acetylneuraminate metabolic process(GO:0006054) |
| 0.0 | 2.1 | GO:0043171 | peptide catabolic process(GO:0043171) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 3.9 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
| 0.0 | 3.2 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
| 0.0 | 3.1 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
| 0.3 | 2.6 | GO:0043196 | varicosity(GO:0043196) |
| 0.0 | 2.3 | GO:0043657 | host(GO:0018995) host cell(GO:0043657) |
| 0.0 | 2.2 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
| 0.1 | 1.9 | GO:0000788 | nuclear nucleosome(GO:0000788) |
| 0.3 | 1.8 | GO:0042272 | nuclear RNA export factor complex(GO:0042272) |
| 0.1 | 1.6 | GO:0035068 | micro-ribonucleoprotein complex(GO:0035068) |
| 0.0 | 1.6 | GO:0044322 | endoplasmic reticulum quality control compartment(GO:0044322) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 4.0 | GO:0035035 | histone acetyltransferase binding(GO:0035035) |
| 0.1 | 3.1 | GO:0070006 | metalloaminopeptidase activity(GO:0070006) |
| 0.0 | 2.5 | GO:0051219 | phosphoprotein binding(GO:0051219) |
| 0.2 | 2.4 | GO:0003828 | alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828) |
| 0.1 | 2.3 | GO:0042609 | CD4 receptor binding(GO:0042609) |
| 0.1 | 2.3 | GO:0005086 | ARF guanyl-nucleotide exchange factor activity(GO:0005086) |
| 0.0 | 2.2 | GO:0035254 | glutamate receptor binding(GO:0035254) |
| 0.2 | 2.1 | GO:0003835 | beta-galactoside alpha-2,6-sialyltransferase activity(GO:0003835) |
| 0.0 | 2.1 | GO:0005035 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
| 0.0 | 2.0 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 6.6 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
| 0.0 | 4.4 | PID IL4 2PATHWAY | IL4-mediated signaling events |
| 0.1 | 4.3 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
| 0.0 | 3.2 | PID CMYB PATHWAY | C-MYB transcription factor network |
| 0.0 | 2.6 | PID RAS PATHWAY | Regulation of Ras family activation |
| 0.1 | 2.5 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
| 0.0 | 2.3 | PID IL2 1PATHWAY | IL2-mediated signaling events |
| 0.0 | 2.3 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
| 0.0 | 1.9 | PID IL27 PATHWAY | IL27-mediated signaling events |
| 0.0 | 1.8 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 2.8 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
| 0.0 | 2.5 | REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY | Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery |
| 0.1 | 2.4 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
| 0.1 | 2.3 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
| 0.0 | 2.0 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
| 0.1 | 1.8 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
| 0.0 | 1.8 | REACTOME TRAF6 MEDIATED NFKB ACTIVATION | Genes involved in TRAF6 mediated NF-kB activation |
| 0.0 | 1.8 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
| 0.0 | 1.8 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
| 0.1 | 1.7 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |