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Illumina Body Map 2

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Results for CUACAGU

Z-value: 0.19

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miRNA associated with seed CUACAGU

NamemiRBASE accession
hsa-miR-139-5p
MIMAT0000250

Activity profile of CUACAGU motif

Sorted Z-values of CUACAGU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr16_+_58497567 0.33 ENST00000258187.5
NDRG4
NDRG family member 4
chr5_-_136834982 0.25 ENST00000510689.1
ENST00000394945.1
SPOCK1
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
chrX_-_33146477 0.20 ENST00000378677.2
DMD
dystrophin
chr18_+_59000815 0.20 ENST00000262717.4
CDH20
cadherin 20, type 2
chr19_+_10527449 0.17 ENST00000592685.1
ENST00000380702.2
PDE4A
phosphodiesterase 4A, cAMP-specific
chr12_+_20522179 0.17 ENST00000359062.3
PDE3A
phosphodiesterase 3A, cGMP-inhibited
chr9_-_101471479 0.17 ENST00000259455.2
GABBR2
gamma-aminobutyric acid (GABA) B receptor, 2
chrX_-_25034065 0.17 ENST00000379044.4
ARX
aristaless related homeobox
chr5_-_45696253 0.16 ENST00000303230.4
HCN1
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
chr3_+_158991025 0.15 ENST00000337808.6
IQCJ-SCHIP1
IQCJ-SCHIP1 readthrough
chr17_-_78450398 0.15 ENST00000306773.4
NPTX1
neuronal pentraxin I
chr4_+_113970772 0.14 ENST00000504454.1
ENST00000394537.3
ENST00000357077.4
ENST00000264366.6
ANK2
ankyrin 2, neuronal
chr3_+_159557637 0.13 ENST00000445224.2
SCHIP1
schwannomin interacting protein 1
chr2_-_166930131 0.13 ENST00000303395.4
ENST00000409050.1
ENST00000423058.2
ENST00000375405.3
SCN1A
sodium channel, voltage-gated, type I, alpha subunit
chr3_-_116164306 0.13 ENST00000490035.2
LSAMP
limbic system-associated membrane protein
chr12_+_26348429 0.13 ENST00000242729.2
SSPN
sarcospan
chr2_+_170683942 0.12 ENST00000272793.5
UBR3
ubiquitin protein ligase E3 component n-recognin 3 (putative)
chr18_+_55018044 0.12 ENST00000324000.3
ST8SIA3
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr4_+_134070439 0.11 ENST00000264360.5
PCDH10
protocadherin 10
chr10_+_31608054 0.11 ENST00000320985.10
ENST00000361642.5
ENST00000560721.2
ENST00000558440.1
ENST00000424869.1
ENST00000542815.3
ZEB1
zinc finger E-box binding homeobox 1
chr1_-_217262969 0.11 ENST00000361525.3
ESRRG
estrogen-related receptor gamma
chr1_-_175712829 0.10 ENST00000367674.2
TNR
tenascin R
chr5_-_59189545 0.10 ENST00000340635.6
PDE4D
phosphodiesterase 4D, cAMP-specific
chr17_+_27717415 0.10 ENST00000583121.1
ENST00000261716.3
TAOK1
TAO kinase 1
chr2_-_69870835 0.09 ENST00000409085.4
ENST00000406297.3
AAK1
AP2 associated kinase 1
chr7_-_75988321 0.09 ENST00000307630.3
YWHAG
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
chr5_-_132073210 0.09 ENST00000378735.1
ENST00000378746.4
KIF3A
kinesin family member 3A
chr1_+_29563011 0.08 ENST00000345512.3
ENST00000373779.3
ENST00000356870.3
ENST00000323874.8
ENST00000428026.2
ENST00000460170.2
PTPRU
protein tyrosine phosphatase, receptor type, U
chr15_-_79383102 0.08 ENST00000558480.2
ENST00000419573.3
RASGRF1
Ras protein-specific guanine nucleotide-releasing factor 1
chr5_+_143584814 0.08 ENST00000507359.3
KCTD16
potassium channel tetramerization domain containing 16
chr18_+_49866496 0.08 ENST00000442544.2
DCC
deleted in colorectal carcinoma
chr13_+_112721913 0.08 ENST00000330949.1
SOX1
SRY (sex determining region Y)-box 1
chrX_-_114468605 0.07 ENST00000538422.1
ENST00000317135.8
LRCH2
leucine-rich repeats and calponin homology (CH) domain containing 2
chrX_-_77041685 0.07 ENST00000373344.5
ENST00000395603.3
ATRX
alpha thalassemia/mental retardation syndrome X-linked
chr2_+_27070964 0.07 ENST00000288699.6
DPYSL5
dihydropyrimidinase-like 5
chr11_-_95657231 0.07 ENST00000409459.1
ENST00000352297.7
ENST00000393223.3
ENST00000346299.5
MTMR2
myotubularin related protein 2
chrX_-_73834449 0.06 ENST00000332687.6
ENST00000349225.2
RLIM
ring finger protein, LIM domain interacting
chrX_+_37430822 0.06 ENST00000378621.3
ENST00000378619.3
LANCL3
LanC lantibiotic synthetase component C-like 3 (bacterial)
chr8_-_105601134 0.06 ENST00000276654.5
ENST00000424843.2
LRP12
low density lipoprotein receptor-related protein 12
chr12_-_129570545 0.06 ENST00000389441.4
TMEM132D
transmembrane protein 132D
chr9_+_77112244 0.05 ENST00000376896.3
RORB
RAR-related orphan receptor B
chr3_-_160283348 0.05 ENST00000334256.4
KPNA4
karyopherin alpha 4 (importin alpha 3)
chr5_+_15500280 0.04 ENST00000504595.1
FBXL7
F-box and leucine-rich repeat protein 7
chr1_+_2985760 0.04 ENST00000378391.2
ENST00000514189.1
ENST00000270722.5
PRDM16
PR domain containing 16
chr1_-_225840747 0.04 ENST00000366843.2
ENST00000366844.3
ENAH
enabled homolog (Drosophila)
chr3_-_124774802 0.04 ENST00000311127.4
HEG1
heart development protein with EGF-like domains 1
chr7_+_20370746 0.04 ENST00000222573.4
ITGB8
integrin, beta 8
chr1_-_72748417 0.03 ENST00000357731.5
NEGR1
neuronal growth regulator 1
chr18_-_53255766 0.03 ENST00000566286.1
ENST00000564999.1
ENST00000566279.1
ENST00000354452.3
ENST00000356073.4
TCF4
transcription factor 4
chr16_-_755819 0.03 ENST00000397621.1
FBXL16
F-box and leucine-rich repeat protein 16
chr2_+_113033164 0.03 ENST00000409871.1
ENST00000343936.4
ZC3H6
zinc finger CCCH-type containing 6
chr15_-_77363513 0.03 ENST00000267970.4
TSPAN3
tetraspanin 3
chr10_-_735553 0.03 ENST00000280886.6
ENST00000423550.1
DIP2C
DIP2 disco-interacting protein 2 homolog C (Drosophila)
chr9_-_14314066 0.03 ENST00000397575.3
NFIB
nuclear factor I/B
chr10_-_99393242 0.03 ENST00000370635.3
ENST00000478953.1
ENST00000335628.3
MORN4
MORN repeat containing 4
chr1_-_149982624 0.03 ENST00000417191.1
ENST00000369135.4
OTUD7B
OTU domain containing 7B
chr1_+_114472222 0.03 ENST00000369558.1
ENST00000369561.4
HIPK1
homeodomain interacting protein kinase 1
chr2_+_191273052 0.02 ENST00000417958.1
ENST00000432036.1
ENST00000392328.1
MFSD6
major facilitator superfamily domain containing 6
chr20_-_48099182 0.02 ENST00000371741.4
KCNB1
potassium voltage-gated channel, Shab-related subfamily, member 1
chr4_-_99579733 0.02 ENST00000305798.3
TSPAN5
tetraspanin 5
chr19_-_5340730 0.02 ENST00000372412.4
ENST00000357368.4
ENST00000262963.6
ENST00000348075.2
ENST00000353284.2
PTPRS
protein tyrosine phosphatase, receptor type, S
chr4_-_114682936 0.02 ENST00000454265.2
ENST00000429180.1
ENST00000418639.2
ENST00000394526.2
ENST00000296402.5
CAMK2D
calcium/calmodulin-dependent protein kinase II delta
chr6_+_37787262 0.02 ENST00000287218.4
ZFAND3
zinc finger, AN1-type domain 3
chr1_+_87794150 0.02 ENST00000370544.5
LMO4
LIM domain only 4
chr2_-_11484710 0.01 ENST00000315872.6
ROCK2
Rho-associated, coiled-coil containing protein kinase 2
chr16_-_10674528 0.01 ENST00000359543.3
EMP2
epithelial membrane protein 2
chr12_+_57998595 0.01 ENST00000337737.3
ENST00000548198.1
ENST00000551632.1
DTX3
deltex homolog 3 (Drosophila)
chr5_-_158526756 0.01 ENST00000313708.6
ENST00000517373.1
EBF1
early B-cell factor 1
chr15_-_35280426 0.01 ENST00000559564.1
ENST00000356321.4
ZNF770
zinc finger protein 770
chr1_-_155532484 0.01 ENST00000368346.3
ENST00000548830.1
ASH1L
ash1 (absent, small, or homeotic)-like (Drosophila)
chr12_+_123237321 0.01 ENST00000280557.6
ENST00000455982.2
DENR
density-regulated protein
chr13_-_21476900 0.01 ENST00000400602.2
ENST00000255305.6
XPO4
exportin 4
chr17_+_64298944 0.01 ENST00000413366.3
PRKCA
protein kinase C, alpha
chr12_+_123868320 0.01 ENST00000402868.3
ENST00000330479.4
SETD8
SET domain containing (lysine methyltransferase) 8
chr5_+_149109825 0.01 ENST00000360453.4
ENST00000394320.3
ENST00000309241.5
PPARGC1B
peroxisome proliferator-activated receptor gamma, coactivator 1 beta
chr1_+_61547894 0.00 ENST00000403491.3
NFIA
nuclear factor I/A
chr3_-_129407535 0.00 ENST00000432054.2
TMCC1
transmembrane and coiled-coil domain family 1
chr2_-_32264850 0.00 ENST00000295066.3
ENST00000342166.5
DPY30
dpy-30 homolog (C. elegans)
chr3_-_123603137 0.00 ENST00000360304.3
ENST00000359169.1
ENST00000346322.5
ENST00000360772.3
MYLK
myosin light chain kinase
chr10_+_98741041 0.00 ENST00000286067.2
C10orf12
chromosome 10 open reading frame 12
chr17_+_56160768 0.00 ENST00000579991.2
DYNLL2
dynein, light chain, LC8-type 2
chr7_-_138666053 0.00 ENST00000440172.1
ENST00000422774.1
KIAA1549
KIAA1549
chr5_-_114961858 0.00 ENST00000282382.4
ENST00000456936.3
ENST00000408996.4
TMED7-TICAM2
TMED7
TICAM2
TMED7-TICAM2 readthrough
transmembrane emp24 protein transport domain containing 7
toll-like receptor adaptor molecule 2

Network of associatons between targets according to the STRING database.

First level regulatory network of CUACAGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0036371 protein localization to T-tubule(GO:0036371)
0.0 0.1 GO:0033563 dorsal/ventral axon guidance(GO:0033563)
0.0 0.1 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.0 0.2 GO:0060282 positive regulation of oocyte development(GO:0060282)
0.0 0.2 GO:0021831 embryonic olfactory bulb interneuron precursor migration(GO:0021831)
0.0 0.2 GO:0046549 retinal cone cell differentiation(GO:0042670) retinal cone cell development(GO:0046549)
0.0 0.1 GO:0045875 negative regulation of sister chromatid cohesion(GO:0045875)
0.0 0.1 GO:0048690 regulation of sprouting of injured axon(GO:0048686) regulation of axon extension involved in regeneration(GO:0048690)
0.0 0.2 GO:0014809 regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)
0.0 0.3 GO:2001135 regulation of endocytic recycling(GO:2001135)
0.0 0.0 GO:0090271 positive regulation of fibroblast growth factor production(GO:0090271)
0.0 0.1 GO:0050966 detection of mechanical stimulus involved in sensory perception of pain(GO:0050966)
0.0 0.1 GO:0045602 negative regulation of endothelial cell differentiation(GO:0045602)
0.0 0.1 GO:0007185 transmembrane receptor protein tyrosine phosphatase signaling pathway(GO:0007185)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0098855 HCN channel complex(GO:0098855)
0.0 0.2 GO:0038039 G-protein coupled receptor heterodimeric complex(GO:0038039)
0.0 0.1 GO:0072534 perineuronal net(GO:0072534)
0.0 0.1 GO:0016939 kinesin II complex(GO:0016939)
0.0 0.1 GO:0031933 telomeric heterochromatin(GO:0031933)
0.0 0.2 GO:0016013 syntrophin complex(GO:0016013)
0.0 0.0 GO:0034686 integrin alphav-beta8 complex(GO:0034686)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0004119 cGMP-inhibited cyclic-nucleotide phosphodiesterase activity(GO:0004119)
0.0 0.2 GO:0004965 G-protein coupled GABA receptor activity(GO:0004965)
0.0 0.2 GO:0005222 intracellular cAMP activated cation channel activity(GO:0005222)
0.0 0.1 GO:0008426 protein kinase C inhibitor activity(GO:0008426)
0.0 0.1 GO:0005042 netrin receptor activity(GO:0005042)
0.0 0.1 GO:0015616 DNA translocase activity(GO:0015616)
0.0 0.1 GO:0050682 AF-2 domain binding(GO:0050682)
0.0 0.1 GO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828)