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Illumina Body Map 2
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Results for CUACAGU
Z-value: 0.19
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miRNA associated with seed CUACAGU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-139-5p
|
MIMAT0000250 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr16_+_58497567 Show fit | 0.33 |
ENST00000258187.5
|
NDRG family member 4 |
|
| chr5_-_136834982 Show fit | 0.25 |
ENST00000510689.1
ENST00000394945.1 |
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 |
|
| chrX_-_33146477 Show fit | 0.20 |
ENST00000378677.2
|
dystrophin |
|
| chr18_+_59000815 Show fit | 0.20 |
ENST00000262717.4
|
cadherin 20, type 2 |
|
| chr19_+_10527449 Show fit | 0.17 |
ENST00000592685.1
ENST00000380702.2 |
phosphodiesterase 4A, cAMP-specific |
|
| chr12_+_20522179 Show fit | 0.17 |
ENST00000359062.3
|
phosphodiesterase 3A, cGMP-inhibited |
|
| chr9_-_101471479 Show fit | 0.17 |
ENST00000259455.2
|
gamma-aminobutyric acid (GABA) B receptor, 2 |
|
| chrX_-_25034065 Show fit | 0.17 |
ENST00000379044.4
|
aristaless related homeobox |
|
| chr5_-_45696253 Show fit | 0.16 |
ENST00000303230.4
|
hyperpolarization activated cyclic nucleotide-gated potassium channel 1 |
|
| chr3_+_158991025 Show fit | 0.15 |
ENST00000337808.6
|
IQCJ-SCHIP1 readthrough |
Network of associatons between targets according to the STRING database.
First level regulatory network of CUACAGU
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:2001135 | regulation of endocytic recycling(GO:2001135) |
| 0.0 | 0.2 | GO:0060282 | positive regulation of oocyte development(GO:0060282) |
| 0.0 | 0.2 | GO:0021831 | embryonic olfactory bulb interneuron precursor migration(GO:0021831) |
| 0.0 | 0.2 | GO:0046549 | retinal cone cell differentiation(GO:0042670) retinal cone cell development(GO:0046549) |
| 0.0 | 0.2 | GO:0014809 | regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) |
| 0.0 | 0.1 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
| 0.0 | 0.1 | GO:0033563 | dorsal/ventral axon guidance(GO:0033563) |
| 0.0 | 0.1 | GO:0071596 | ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596) |
| 0.0 | 0.1 | GO:0045875 | negative regulation of sister chromatid cohesion(GO:0045875) |
| 0.0 | 0.1 | GO:0048690 | regulation of sprouting of injured axon(GO:0048686) regulation of axon extension involved in regeneration(GO:0048690) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0098855 | HCN channel complex(GO:0098855) |
| 0.0 | 0.2 | GO:0038039 | G-protein coupled receptor heterodimeric complex(GO:0038039) |
| 0.0 | 0.2 | GO:0016013 | syntrophin complex(GO:0016013) |
| 0.0 | 0.1 | GO:0072534 | perineuronal net(GO:0072534) |
| 0.0 | 0.1 | GO:0016939 | kinesin II complex(GO:0016939) |
| 0.0 | 0.1 | GO:0031933 | telomeric heterochromatin(GO:0031933) |
| 0.0 | 0.0 | GO:0034686 | integrin alphav-beta8 complex(GO:0034686) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0004119 | cGMP-inhibited cyclic-nucleotide phosphodiesterase activity(GO:0004119) |
| 0.0 | 0.2 | GO:0004965 | G-protein coupled GABA receptor activity(GO:0004965) |
| 0.0 | 0.2 | GO:0005222 | intracellular cAMP activated cation channel activity(GO:0005222) |
| 0.0 | 0.1 | GO:0008426 | protein kinase C inhibitor activity(GO:0008426) |
| 0.0 | 0.1 | GO:0005042 | netrin receptor activity(GO:0005042) |
| 0.0 | 0.1 | GO:0015616 | DNA translocase activity(GO:0015616) |
| 0.0 | 0.1 | GO:0050682 | AF-2 domain binding(GO:0050682) |
| 0.0 | 0.1 | GO:0003828 | alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828) |