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Illumina Body Map 2
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Results for GAGAUGA
Z-value: 0.45
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miRNA associated with seed GAGAUGA
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr5_+_32711419 Show fit | 1.13 |
ENST00000265074.8
|
natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) |
|
| chrX_+_73641286 Show fit | 0.99 |
ENST00000587091.1
|
solute carrier family 16, member 2 (thyroid hormone transporter) |
|
| chr8_-_63998590 Show fit | 0.97 |
ENST00000260116.4
|
tocopherol (alpha) transfer protein |
|
| chr11_+_76494253 Show fit | 0.88 |
ENST00000333090.4
|
tsukushi, small leucine rich proteoglycan |
|
| chr3_-_122102065 Show fit | 0.63 |
ENST00000479899.1
ENST00000291458.5 ENST00000497726.1 |
coiled-coil domain containing 58 |
|
| chr13_+_41363581 Show fit | 0.58 |
ENST00000338625.4
|
solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 |
|
| chr12_-_65146636 Show fit | 0.51 |
ENST00000418919.2
|
glucosamine (N-acetyl)-6-sulfatase |
|
| chr9_+_116638562 Show fit | 0.51 |
ENST00000374126.5
ENST00000288466.7 |
zinc finger protein 618 |
|
| chr9_-_71155783 Show fit | 0.42 |
ENST00000377311.3
|
transmembrane protein 252 |
|
| chr17_+_55333876 Show fit | 0.41 |
ENST00000284073.2
|
musashi RNA-binding protein 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of GAGAUGA
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.1 | GO:0002158 | osteoclast proliferation(GO:0002158) |
| 0.2 | 1.0 | GO:0090210 | vitamin E metabolic process(GO:0042360) regulation of establishment of blood-brain barrier(GO:0090210) negative regulation of establishment of blood-brain barrier(GO:0090212) |
| 0.1 | 1.0 | GO:0070327 | thyroid hormone transport(GO:0070327) |
| 0.2 | 0.9 | GO:0061073 | ciliary body morphogenesis(GO:0061073) |
| 0.1 | 0.6 | GO:1903352 | L-ornithine transmembrane transport(GO:1903352) |
| 0.0 | 0.5 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
| 0.1 | 0.4 | GO:0030505 | inorganic diphosphate transport(GO:0030505) |
| 0.1 | 0.4 | GO:0044691 | tooth eruption(GO:0044691) |
| 0.1 | 0.4 | GO:0051138 | positive regulation of NK T cell differentiation(GO:0051138) |
| 0.1 | 0.4 | GO:0060671 | epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.4 | GO:0005588 | collagen type V trimer(GO:0005588) |
| 0.1 | 0.4 | GO:0005584 | collagen type I trimer(GO:0005584) |
| 0.0 | 0.3 | GO:0042567 | insulin-like growth factor ternary complex(GO:0042567) |
| 0.0 | 0.2 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
| 0.0 | 0.1 | GO:0031251 | PAN complex(GO:0031251) |
| 0.0 | 0.1 | GO:0034676 | integrin alpha6-beta4 complex(GO:0034676) |
| 0.0 | 0.1 | GO:0016939 | plus-end kinesin complex(GO:0005873) kinesin II complex(GO:0016939) |
| 0.0 | 0.1 | GO:0042565 | RNA nuclear export complex(GO:0042565) |
| 0.0 | 0.1 | GO:0042825 | TAP complex(GO:0042825) |
| 0.0 | 0.1 | GO:0042585 | germinal vesicle(GO:0042585) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.1 | GO:0016941 | natriuretic peptide receptor activity(GO:0016941) |
| 0.2 | 1.0 | GO:0008431 | vitamin E binding(GO:0008431) |
| 0.1 | 1.0 | GO:0015349 | thyroid hormone transmembrane transporter activity(GO:0015349) |
| 0.1 | 0.6 | GO:0000064 | L-ornithine transmembrane transporter activity(GO:0000064) |
| 0.1 | 0.5 | GO:0008449 | N-acetylglucosamine-6-sulfatase activity(GO:0008449) |
| 0.1 | 0.4 | GO:0035529 | NADH pyrophosphatase activity(GO:0035529) |
| 0.0 | 0.4 | GO:0043426 | MRF binding(GO:0043426) |
| 0.0 | 0.4 | GO:0003828 | alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828) |
| 0.0 | 0.4 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
| 0.0 | 0.4 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.9 | NABA COLLAGENS | Genes encoding collagen proteins |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.5 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
| 0.0 | 0.4 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
| 0.0 | 0.3 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
| 0.0 | 0.3 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
| 0.0 | 0.2 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |