Illumina Body Map 2
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PPARA | hg19_v2_chr22_+_46546494_46546525 | 0.44 | 1.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_42744130 Show fit | 10.97 |
ENST00000417472.1
ENST00000442469.1 |
hedgehog acyltransferase-like |
|
chrX_-_21776281 Show fit | 9.21 |
ENST00000379494.3
|
small muscle protein, X-linked |
|
chr5_+_149569520 Show fit | 8.77 |
ENST00000230671.2
ENST00000524041.1 |
solute carrier family 6 (neurotransmitter transporter), member 7 |
|
chr1_+_236849754 Show fit | 8.26 |
ENST00000542672.1
ENST00000366578.4 |
actinin, alpha 2 |
|
chr3_-_42744312 Show fit | 8.17 |
ENST00000416756.1
ENST00000441594.1 |
hedgehog acyltransferase-like |
|
chr16_+_6069586 Show fit | 8.05 |
ENST00000547372.1
|
RNA binding protein, fox-1 homolog (C. elegans) 1 |
|
chr16_-_4292071 Show fit | 7.50 |
ENST00000399609.3
|
sarcalumenin |
|
chr3_-_42744270 Show fit | 7.45 |
ENST00000457462.1
|
hedgehog acyltransferase-like |
|
chr1_+_160097462 Show fit | 6.97 |
ENST00000447527.1
|
ATPase, Na+/K+ transporting, alpha 2 polypeptide |
|
chr3_-_42743006 Show fit | 6.88 |
ENST00000310417.5
|
hedgehog acyltransferase-like |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
8.4 | 33.5 | GO:0060254 | regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060) |
0.4 | 28.3 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.3 | 23.6 | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome(GO:0000381) |
1.9 | 13.4 | GO:1903279 | protein transport into plasma membrane raft(GO:0044861) regulation of calcium:sodium antiporter activity(GO:1903279) positive regulation of calcium:sodium antiporter activity(GO:1903281) |
0.7 | 13.0 | GO:0090361 | platelet-derived growth factor production(GO:0090360) regulation of platelet-derived growth factor production(GO:0090361) |
0.1 | 12.0 | GO:0006941 | striated muscle contraction(GO:0006941) |
0.3 | 11.4 | GO:0042776 | mitochondrial ATP synthesis coupled proton transport(GO:0042776) |
0.9 | 11.0 | GO:0014722 | regulation of skeletal muscle contraction by calcium ion signaling(GO:0014722) |
0.7 | 10.1 | GO:2000324 | positive regulation of glucocorticoid receptor signaling pathway(GO:2000324) |
0.5 | 9.8 | GO:0010510 | regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 38.4 | GO:0048471 | perinuclear region of cytoplasm(GO:0048471) |
0.1 | 25.1 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.9 | 22.7 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) |
0.1 | 20.5 | GO:0030017 | sarcomere(GO:0030017) |
0.3 | 17.9 | GO:0005747 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 16.7 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.0 | 15.9 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.1 | 12.6 | GO:0030426 | growth cone(GO:0030426) |
0.7 | 11.0 | GO:0033018 | sarcoplasmic reticulum lumen(GO:0033018) |
0.3 | 11.0 | GO:0031143 | pseudopodium(GO:0031143) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 26.7 | GO:0005391 | sodium:potassium-exchanging ATPase activity(GO:0005391) |
0.4 | 25.9 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.1 | 23.1 | GO:0008022 | protein C-terminus binding(GO:0008022) |
0.0 | 12.9 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.3 | 12.1 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
0.1 | 11.5 | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627) |
0.3 | 10.9 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.7 | 9.8 | GO:0052658 | inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658) |
0.1 | 9.2 | GO:0043531 | ADP binding(GO:0043531) |
1.8 | 9.1 | GO:0052836 | inositol 5-diphosphate pentakisphosphate 5-kinase activity(GO:0052836) inositol diphosphate tetrakisphosphate kinase activity(GO:0052839) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.7 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 9.7 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 5.6 | PID INSULIN PATHWAY | Insulin Pathway |
0.1 | 5.3 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.1 | 5.2 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.1 | 4.1 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 3.7 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.0 | 3.6 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 3.2 | PID ENDOTHELIN PATHWAY | Endothelins |
0.1 | 2.6 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 34.7 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.4 | 26.7 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.2 | 17.5 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.4 | 12.7 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.2 | 11.6 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.5 | 9.8 | REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX | Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex |
0.4 | 9.6 | REACTOME FORMATION OF ATP BY CHEMIOSMOTIC COUPLING | Genes involved in Formation of ATP by chemiosmotic coupling |
0.3 | 8.4 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.0 | 8.0 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.0 | 5.9 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |