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Illumina Body Map 2
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Results for RHOXF1
Z-value: 1.67
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Transcription factors associated with RHOXF1
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| RHOXF1 | hg19_v2_chrX_-_119249819_119249847 | 0.43 | 1.3e-02 | Click! |
Network of associatons between targets according to the STRING database.
First level regulatory network of RHOXF1
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 17.7 | GO:0007283 | spermatogenesis(GO:0007283) |
| 0.8 | 8.5 | GO:0016560 | protein import into peroxisome matrix, docking(GO:0016560) |
| 0.0 | 7.7 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
| 1.0 | 7.2 | GO:0014718 | positive regulation of satellite cell activation involved in skeletal muscle regeneration(GO:0014718) |
| 0.1 | 7.1 | GO:0010107 | potassium ion import(GO:0010107) |
| 0.3 | 6.2 | GO:0019800 | peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800) |
| 0.2 | 5.7 | GO:0036158 | outer dynein arm assembly(GO:0036158) |
| 0.4 | 5.5 | GO:0055059 | asymmetric neuroblast division(GO:0055059) |
| 0.0 | 5.5 | GO:0007608 | sensory perception of smell(GO:0007608) |
| 1.0 | 4.8 | GO:0072139 | glomerular parietal epithelial cell differentiation(GO:0072139) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 15.7 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
| 0.1 | 14.1 | GO:0034705 | potassium channel complex(GO:0034705) |
| 0.0 | 10.6 | GO:0045211 | postsynaptic membrane(GO:0045211) |
| 0.1 | 9.6 | GO:0005778 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
| 0.0 | 8.2 | GO:0043296 | apical junction complex(GO:0043296) |
| 0.1 | 7.5 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
| 0.0 | 7.5 | GO:0005796 | Golgi lumen(GO:0005796) |
| 0.6 | 7.2 | GO:0036157 | outer dynein arm(GO:0036157) |
| 0.1 | 6.8 | GO:0042734 | presynaptic membrane(GO:0042734) |
| 0.2 | 6.7 | GO:0005614 | interstitial matrix(GO:0005614) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 13.0 | GO:0005509 | calcium ion binding(GO:0005509) |
| 0.0 | 12.0 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
| 0.3 | 10.6 | GO:0031402 | sodium ion binding(GO:0031402) |
| 0.9 | 8.5 | GO:0005052 | peroxisome matrix targeting signal-1 binding(GO:0005052) |
| 0.1 | 7.7 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
| 0.2 | 7.0 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
| 0.1 | 6.8 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
| 0.3 | 6.4 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
| 0.2 | 6.3 | GO:0005545 | 1-phosphatidylinositol binding(GO:0005545) |
| 0.0 | 5.8 | GO:0008083 | growth factor activity(GO:0008083) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 16.2 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
| 0.2 | 11.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
| 0.0 | 7.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
| 0.1 | 4.6 | PID AURORA A PATHWAY | Aurora A signaling |
| 0.1 | 4.1 | ST G ALPHA I PATHWAY | G alpha i Pathway |
| 0.0 | 3.7 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
| 0.0 | 2.9 | NABA COLLAGENS | Genes encoding collagen proteins |
| 0.0 | 2.8 | PID BMP PATHWAY | BMP receptor signaling |
| 0.0 | 2.7 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
| 0.1 | 2.6 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.6 | REACTOME KINESINS | Genes involved in Kinesins |
| 0.1 | 5.5 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
| 0.1 | 5.3 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
| 0.2 | 4.9 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
| 0.1 | 4.8 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
| 0.1 | 4.7 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
| 0.1 | 4.6 | REACTOME STEROID HORMONES | Genes involved in Steroid hormones |
| 0.0 | 4.3 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
| 0.2 | 4.2 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |
| 0.1 | 4.1 | REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GLP1 | Genes involved in Synthesis, Secretion, and Inactivation of Glucagon-like Peptide-1 (GLP-1) |