Illumina Body Map 2
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
VENTX | hg19_v2_chr10_+_135050908_135050908 | 0.24 | 1.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_+_107712173 Show fit | 4.12 |
ENST00000280758.5
ENST00000420571.2 |
BTB (POZ) domain containing 11 |
|
chr4_-_155511887 Show fit | 3.99 |
ENST00000302053.3
ENST00000403106.3 |
fibrinogen alpha chain |
|
chr3_+_32859510 Show fit | 3.28 |
ENST00000383763.5
|
tripartite motif containing 71, E3 ubiquitin protein ligase |
|
chr11_+_123430948 Show fit | 3.14 |
ENST00000529432.1
ENST00000534764.1 |
GRAM domain containing 1B |
|
chr14_+_22433675 Show fit | 2.91 |
ENST00000390442.3
|
T cell receptor alpha variable 12-3 |
|
chr4_+_105828492 Show fit | 2.69 |
ENST00000506148.1
|
RP11-556I14.1 |
|
chr14_+_92789498 Show fit | 2.67 |
ENST00000531433.1
|
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 |
|
chr18_+_59000815 Show fit | 2.63 |
ENST00000262717.4
|
cadherin 20, type 2 |
|
chr8_+_50824233 Show fit | 2.63 |
ENST00000522124.1
|
syntrophin, gamma 1 |
|
chr21_+_39644395 Show fit | 2.62 |
ENST00000398934.1
|
potassium inwardly-rectifying channel, subfamily J, member 15 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.5 | GO:0010107 | potassium ion import(GO:0010107) |
0.0 | 5.7 | GO:0035023 | regulation of Rho protein signal transduction(GO:0035023) |
0.8 | 4.6 | GO:0061034 | olfactory bulb mitral cell layer development(GO:0061034) |
0.0 | 4.4 | GO:0060395 | SMAD protein signal transduction(GO:0060395) |
0.6 | 4.0 | GO:0019805 | quinolinate biosynthetic process(GO:0019805) |
0.3 | 4.0 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
0.0 | 4.0 | GO:0051056 | regulation of small GTPase mediated signal transduction(GO:0051056) |
0.1 | 3.7 | GO:2000353 | positive regulation of endothelial cell apoptotic process(GO:2000353) |
0.0 | 3.5 | GO:0006903 | vesicle targeting(GO:0006903) |
0.1 | 3.3 | GO:0045974 | miRNA mediated inhibition of translation(GO:0035278) negative regulation of translation, ncRNA-mediated(GO:0040033) regulation of translation, ncRNA-mediated(GO:0045974) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.6 | GO:0010369 | chromocenter(GO:0010369) |
0.0 | 4.2 | GO:0000932 | cytoplasmic mRNA processing body(GO:0000932) |
0.0 | 4.1 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.3 | 4.0 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.0 | 3.9 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 3.5 | GO:0035577 | azurophil granule membrane(GO:0035577) |
0.0 | 3.3 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.0 | 3.1 | GO:0045095 | keratin filament(GO:0045095) |
0.2 | 2.6 | GO:0016013 | syntrophin complex(GO:0016013) |
0.1 | 2.6 | GO:0036019 | endolysosome(GO:0036019) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.5 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
0.0 | 6.4 | GO:0060090 | binding, bridging(GO:0060090) |
0.0 | 5.7 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.1 | 5.4 | GO:0004407 | histone deacetylase activity(GO:0004407) |
0.0 | 4.1 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 4.0 | GO:0016831 | carboxy-lyase activity(GO:0016831) |
1.2 | 3.7 | GO:0005174 | CD40 receptor binding(GO:0005174) |
0.1 | 3.5 | GO:0030247 | pattern binding(GO:0001871) polysaccharide binding(GO:0030247) |
0.1 | 3.3 | GO:0035198 | miRNA binding(GO:0035198) |
0.3 | 2.7 | GO:0008273 | calcium, potassium:sodium antiporter activity(GO:0008273) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.7 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 4.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 3.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.6 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 2.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 2.3 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 2.2 | PID RHOA PATHWAY | RhoA signaling pathway |
0.1 | 2.1 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.0 | 1.6 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 1.5 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 7.5 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 6.5 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.2 | 4.0 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.2 | 4.0 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.0 | 3.7 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 3.5 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 2.4 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.0 | 2.4 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 2.1 | REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS | Genes involved in Trafficking of GluR2-containing AMPA receptors |