hg19_v2_chr18_+_29171689_29171847	3.77506	AACACUG	ENST00000237014.3|TTR|ENSG00000118271.5|transthyretin
hg19_v2_chr1_-_173886491_173886516	2.66652	AACACUG	ENST00000367698.3|SERPINC1|ENSG00000117601.9|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg19_v2_chr5_-_11904152_11904166	2.2434	AACACUG	ENST00000304623.8|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000458100.2|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr10_+_60936347_60936358	2.23177	AACACUG	ENST00000373880.4|PHYHIPL|ENSG00000165443.7|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v2_chr3_-_116164306_116164380	2.06583	AACACUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr14_-_38064198_38064239	1.94113	AACACUG	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr3_+_158991025_158991083	1.90081	AACACUG	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr3_+_39851094_39851151	1.78947	AACACUG	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr14_+_53019822_53019873	1.70303	AACACUG	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr3_-_24536253_24536328	1.68652	AACACUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr3_+_159557637_159557650	1.63942	AACACUG	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr2_-_50574856_50574892	1.57701	AACACUG	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr4_-_186877502_186877563	1.56723	AACACUG	ENST00000431902.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000284776.7|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000415274.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr17_+_56833184_56833249	1.55004	AACACUG	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chrX_-_13956737_13956808	1.52304	AACACUG	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr1_+_95582881_95582995	1.50487	AACACUG	ENST00000370203.4|TMEM56|ENSG00000152078.5|transmembrane protein 56 	ENST00000456991.1|TMEM56|ENSG00000152078.5|transmembrane protein 56
hg19_v2_chr5_-_45696253_45696427	1.50459	AACACUG	ENST00000303230.4|HCN1|ENSG00000164588.4|hyperpolarization activated cyclic nucleotide-gated potassium channel 1
hg19_v2_chr3_+_61547585_61547585	1.41262	AACACUG	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr11_-_2158507_2158535	1.3913	AACACUG	ENST00000381392.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A) 	ENST00000381395.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A) 	ENST00000418738.2|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr13_+_80055284_80055295	1.2956	AACACUG	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr3_+_85008089_85008189	1.28584	AACACUG	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr8_+_136469684_136469710	1.25765	AACACUG	ENST00000355849.5|KHDRBS3|ENSG00000131773.9|KH domain containing, RNA binding, signal transduction associated 3
hg19_v2_chr17_-_8534067_8534088	1.23289	AACACUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr2_+_234545092_234545100	1.2272	AACACUG	ENST00000344644.5|UGT1A10|ENSG00000242515.1|UDP glucuronosyltransferase 1 family, polypeptide A10
hg19_v2_chr2_+_234580499_234580512	1.21244	AACACUG	ENST00000354728.4|UGT1A9|ENSG00000241119.1|UDP glucuronosyltransferase 1 family, polypeptide A9
hg19_v2_chr19_-_33555780_33555801	1.21192	AACACUG	ENST00000254260.3|RHPN2|ENSG00000131941.3|rhophilin, Rho GTPase binding protein 2 	ENST00000400226.4|RHPN2|ENSG00000131941.3|rhophilin, Rho GTPase binding protein 2
hg19_v2_chr2_-_139537918_139537946	1.19063	AACACUG	ENST00000272641.3|NXPH2|ENSG00000144227.4|neurexophilin 2
hg19_v2_chr2_+_234621551_234621638	1.18523	AACACUG	ENST00000608381.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000373414.3|UGT1A5|ENSG00000240224.1|UDP glucuronosyltransferase 1 family, polypeptide A5
hg19_v2_chr1_-_84464780_84464862	1.14165	AACACUG	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr2_+_105471969_105471969	1.139	AACACUG	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr2_+_234590556_234590584	1.12553	AACACUG	ENST00000373426.3|UGT1A7|ENSG00000244122.2|UDP glucuronosyltransferase 1 family, polypeptide A7
hg19_v2_chr9_+_4490394_4490446	1.12078	AACACUG	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr3_-_142682178_142682178	1.1169	AACACUG	ENST00000340634.3|PAQR9|ENSG00000188582.4|progestin and adipoQ receptor family member IX
hg19_v2_chr2_+_234637754_234637773	1.09696	AACACUG	ENST00000482026.1|UGT1A3|ENSG00000243135.1|UDP glucuronosyltransferase 1 family, polypeptide A3 	ENST00000609767.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr20_+_10199468_10199516	1.08644	AACACUG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr6_+_107811162_107811196	1.08184	AACACUG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr6_-_94129244_94129284	1.07648	AACACUG	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr2_+_234627424_234627444	1.07283	AACACUG	ENST00000373409.3|UGT1A4|ENSG00000244474.1|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v2_chr5_-_43313574_43313614	1.04137	AACACUG	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr2_+_234526272_234526291	1.0365	AACACUG	ENST00000373450.4|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr2_+_179059365_179059376	0.972576	AACACUG	ENST00000190611.4|OSBPL6|ENSG00000079156.12|oxysterol binding protein-like 6
hg19_v2_chr2_-_2334888_2335053	0.967736	AACACUG	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr9_-_23821273_23821313	0.962777	AACACUG	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr1_-_217262969_217262995	0.952458	AACACUG	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr18_-_40857493_40857615	0.929443	AACACUG	ENST00000255224.3|SYT4|ENSG00000132872.7|synaptotagmin IV
hg19_v2_chr12_+_72666407_72666463	0.928427	AACACUG	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr19_+_19322758_19322782	0.926719	AACACUG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr4_+_57138437_57138570	0.926019	AACACUG	ENST00000504228.1|KIAA1211|ENSG00000109265.8|KIAA1211 	ENST00000541073.1|KIAA1211|ENSG00000109265.8|KIAA1211
hg19_v2_chr3_+_25469724_25469773	0.909231	AACACUG	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr5_+_63802109_63802139	0.901175	AACACUG	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr2_+_234601512_234601520	0.876415	AACACUG	ENST00000305139.6|UGT1A6|ENSG00000167165.14|UDP glucuronosyltransferase 1 family, polypeptide A6
hg19_v2_chr10_-_81205373_81205429	0.869351	AACACUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr3_+_152552685_152552736	0.856857	AACACUG	ENST00000305097.3|P2RY1|ENSG00000169860.4|purinergic receptor P2Y, G-protein coupled, 1
hg19_v2_chr12_+_41086297_41086354	0.84765	AACACUG	ENST00000551295.2|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr2_+_45878790_45878913	0.793476	AACACUG	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr6_+_72596604_72596727	0.789981	AACACUG	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_-_6453399_6453423	0.784931	AACACUG	ENST00000608083.1|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr4_-_83719983_83720085	0.779298	AACACUG	ENST00000319540.4|SCD5|ENSG00000145284.7|stearoyl-CoA desaturase 5
hg19_v2_chr17_-_41856305_41856363	0.768115	AACACUG	ENST00000397937.2|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3 	ENST00000226004.3|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3
hg19_v2_chr14_+_33408449_33408525	0.761307	AACACUG	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr14_+_36295504_36295580	0.760108	AACACUG	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr20_-_22565101_22565223	0.755924	AACACUG	ENST00000419308.2|FOXA2|ENSG00000125798.10|forkhead box A2
hg19_v2_chr19_-_57352064_57352102	0.742487	AACACUG	ENST00000326441.9|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593695.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000599577.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593711.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000594389.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000423103.2|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000598410.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000391708.3|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000221722.5|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000599935.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2
hg19_v2_chr7_+_43152191_43152211	0.741896	AACACUG	ENST00000395891.2|HECW1|ENSG00000002746.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr22_+_38054721_38054737	0.727286	AACACUG	ENST00000215904.6|PDXP|ENSG00000241360.1|pyridoxal (pyridoxine, vitamin B6) phosphatase
hg19_v2_chr1_+_50574585_50574638	0.713071	AACACUG	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr13_-_53422640_53422780	0.681204	AACACUG	ENST00000338862.4|PCDH8|ENSG00000136099.9|protocadherin 8 	ENST00000377942.3|PCDH8|ENSG00000136099.9|protocadherin 8
hg19_v2_chr4_+_183164574_183164586	0.676418	AACACUG	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr7_-_111846435_111846471	0.664514	AACACUG	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr17_+_40118759_40118772	0.663267	AACACUG	ENST00000393892.3|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr2_+_150187020_150187120	0.65667	AACACUG	ENST00000334166.4|LYPD6|ENSG00000187123.10|LY6/PLAUR domain containing 6
hg19_v2_chr11_+_107461948_107462009	0.641394	AACACUG	ENST00000265840.7|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1 	ENST00000443271.2|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr5_-_24645078_24645096	0.641065	AACACUG	ENST00000264463.4|CDH10|ENSG00000040731.6|cadherin 10, type 2 (T2-cadherin)
hg19_v2_chr6_-_99797522_99797572	0.638047	AACACUG	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr10_+_115803650_115803806	0.637054	AACACUG	ENST00000369295.2|ADRB1|ENSG00000043591.4|adrenoceptor beta 1
hg19_v2_chr7_-_108096822_108096889	0.635175	AACACUG	ENST00000379028.3|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000413765.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000379022.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr7_-_82073109_82073150	0.635077	AACACUG	ENST00000356860.3|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr17_+_72427477_72427667	0.617436	AACACUG	ENST00000342648.5|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C 	ENST00000481232.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr17_+_38171614_38171635	0.605741	AACACUG	ENST00000583218.1|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000394149.3|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte)
hg19_v2_chr12_+_12938541_12938600	0.595703	AACACUG	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr14_-_35182994_35183034	0.591755	AACACUG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr15_+_62853562_62853614	0.591255	AACACUG	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr17_-_1928621_1928641	0.588951	AACACUG	ENST00000331238.6|RTN4RL1|ENSG00000185924.6|reticulon 4 receptor-like 1
hg19_v2_chr1_+_218519577_218519594	0.58727	AACACUG	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr7_-_75988321_75988348	0.585777	AACACUG	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr4_-_5894777_5894799	0.573666	AACACUG	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr2_-_134326009_134326053	0.572631	AACACUG	ENST00000409261.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5 	ENST00000409213.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5
hg19_v2_chr8_-_13372395_13372429	0.569506	AACACUG	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr5_-_132113036_132113061	0.563327	AACACUG	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr5_+_173315283_173315335	0.562844	AACACUG	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr7_-_151217001_151217019	0.551622	AACACUG	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr6_+_10556215_10556240	0.546743	AACACUG	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr2_+_5832799_5832799	0.542744	AACACUG	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr14_-_30396948_30396998	0.542191	AACACUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr6_+_64281906_64281922	0.537675	AACACUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr17_-_78450398_78450413	0.530664	AACACUG	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr14_-_100070363_100070467	0.524729	AACACUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr13_+_93879085_93879136	0.521523	AACACUG	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr11_-_118550375_118550407	0.516064	AACACUG	ENST00000525958.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000264029.4|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000397925.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000529101.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr3_-_33686743_33686807	0.509774	AACACUG	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr3_+_160473996_160474033	0.508097	AACACUG	ENST00000498165.1|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg19_v2_chr2_-_100939195_100939195	0.507987	AACACUG	ENST00000393437.3|LONRF2|ENSG00000170500.8|LON peptidase N-terminal domain and ring finger 2
hg19_v2_chr17_+_53342311_53342400	0.506409	AACACUG	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr6_+_134210243_134210276	0.504706	AACACUG	ENST00000367882.4|TCF21|ENSG00000118526.6|transcription factor 21
hg19_v2_chr13_+_25946201_25946215	0.500992	AACACUG	ENST00000381655.2|ATP8A2|ENSG00000132932.12|ATPase, aminophospholipid transporter, class I, type 8A, member 2
hg19_v2_chr8_-_81787006_81787031	0.493496	AACACUG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr4_+_86396265_86396276	0.488785	AACACUG	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr1_+_181452678_181452716	0.485827	AACACUG	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr12_+_110719032_110719113	0.478539	AACACUG	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chrX_-_50557014_50557060	0.477821	AACACUG	ENST00000376020.2|SHROOM4|ENSG00000158352.11|shroom family member 4
hg19_v2_chr11_+_101981169_101981210	0.476877	AACACUG	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr7_-_156803329_156803362	0.476404	AACACUG	ENST00000252971.6|MNX1|ENSG00000130675.10|motor neuron and pancreas homeobox 1
hg19_v2_chr2_+_198669365_198669426	0.47518	AACACUG	ENST00000428675.1|PLCL1|ENSG00000115896.11|phospholipase C-like 1
hg19_v2_chr6_-_127780510_127780539	0.474147	AACACUG	ENST00000487331.2|KIAA0408|ENSG00000189367.10|KIAA0408 	ENST00000483725.3|KIAA0408|ENSG00000189367.10|KIAA0408
hg19_v2_chr13_-_27334879_27334930	0.473714	AACACUG	ENST00000405846.3|GPR12|ENSG00000132975.6|G protein-coupled receptor 12
hg19_v2_chr21_+_38071430_38071456	0.4737	AACACUG	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr17_+_11924129_11924200	0.47272	AACACUG	ENST00000353533.5|MAP2K4|ENSG00000065559.10|mitogen-activated protein kinase kinase 4 	ENST00000415385.3|MAP2K4|ENSG00000065559.10|mitogen-activated protein kinase kinase 4
hg19_v2_chr6_+_99282570_99282591	0.472444	AACACUG	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr1_+_51701924_51702001	0.470273	AACACUG	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr17_-_17875688_17875736	0.467511	AACACUG	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chr9_+_32384617_32384709	0.464434	AACACUG	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr7_-_79082867_79082900	0.460943	AACACUG	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr1_-_159832438_159832449	0.460166	AACACUG	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr8_+_91803695_91803778	0.451599	AACACUG	ENST00000417640.2|NECAB1|ENSG00000123119.7|N-terminal EF-hand calcium binding protein 1
hg19_v2_chr3_+_187930719_187930729	0.444352	AACACUG	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr3_-_56502375_56502428	0.442676	AACACUG	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr17_+_35294075_35294102	0.44211	AACACUG	ENST00000254457.5|LHX1|ENSG00000132130.7|LIM homeobox 1
hg19_v2_chr2_-_37193606_37193633	0.422054	AACACUG	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr2_-_9143786_9143942	0.41425	AACACUG	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chr7_-_27224795_27224840	0.412695	AACACUG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr6_-_122792919_122792970	0.41194	AACACUG	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr11_+_86748863_86748948	0.409807	AACACUG	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr6_+_17281573_17281605	0.405726	AACACUG	ENST00000379052.5|RBM24|ENSG00000112183.10|RNA binding motif protein 24
hg19_v2_chr6_-_127840453_127840507	0.399489	AACACUG	ENST00000556132.1|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr1_-_175712829_175712906	0.397476	AACACUG	ENST00000367674.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr11_+_33563821_33563877	0.394836	AACACUG	ENST00000321505.4|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000265654.5|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000389726.3|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr11_-_115375107_115375283	0.393226	AACACUG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr19_+_50432400_50432479	0.392015	AACACUG	ENST00000423777.2|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000600336.1|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000597227.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr17_-_38821373_38821440	0.389106	AACACUG	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr21_+_18885430_18885448	0.388137	AACACUG	ENST00000356275.6|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor 	ENST00000400165.1|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor 	ENST00000400169.1|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor 	ENST00000306618.10|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor
hg19_v2_chr20_+_3451650_3451729	0.385907	AACACUG	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr5_-_141704566_141704605	0.385624	AACACUG	ENST00000344120.4|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila) 	ENST00000434127.2|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila)
hg19_v2_chr11_+_22359562_22359643	0.371322	AACACUG	ENST00000263160.3|SLC17A6|ENSG00000091664.7|solute carrier family 17 (vesicular glutamate transporter), member 6
hg19_v2_chr1_+_220701456_220701574	0.370713	AACACUG	ENST00000366918.4|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1 	ENST00000402574.1|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1
hg19_v2_chr1_+_84543734_84543775	0.367191	AACACUG	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr6_+_17600576_17600642	0.366544	AACACUG	ENST00000259963.3|FAM8A1|ENSG00000137414.5|family with sequence similarity 8, member A1
hg19_v2_chr14_-_57735528_57735726	0.362225	AACACUG	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr11_-_105892937_105893130	0.361617	AACACUG	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr18_+_13218769_13218792	0.360338	AACACUG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr18_+_43304092_43304121	0.359421	AACACUG	ENST00000321925.4|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 	ENST00000587601.1|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v2_chr1_+_93913713_93913839	0.355794	AACACUG	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr2_+_169312350_169312372	0.350711	AACACUG	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr1_-_232697304_232697304	0.343238	AACACUG	ENST00000366630.1|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr4_-_41216619_41216637	0.342684	AACACUG	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr19_+_56186557_56186601	0.340725	AACACUG	ENST00000270460.6|EPN1|ENSG00000063245.10|epsin 1
hg19_v2_chr1_+_40723779_40723828	0.340628	AACACUG	ENST00000372759.3|ZMPSTE24|ENSG00000084073.4|zinc metallopeptidase STE24
hg19_v2_chrX_+_118370211_118370222	0.337579	AACACUG	ENST00000217971.7|PGRMC1|ENSG00000101856.8|progesterone receptor membrane component 1
hg19_v2_chr2_-_131850951_131851065	0.334686	AACACUG	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr1_+_200708671_200708744	0.334346	AACACUG	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr18_+_18943554_18943587	0.333242	AACACUG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr17_+_4901199_4901291	0.328426	AACACUG	ENST00000320785.5|KIF1C|ENSG00000129250.7|kinesin family member 1C 	ENST00000574165.1|KIF1C|ENSG00000129250.7|kinesin family member 1C
hg19_v2_chr22_+_46731596_46731658	0.328082	AACACUG	ENST00000381019.3|TRMU|ENSG00000100416.8|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v2_chr11_-_117186946_117186981	0.327095	AACACUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr8_+_102504651_102504683	0.326237	AACACUG	ENST00000251808.3|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila) 	ENST00000521085.1|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila)
hg19_v2_chr4_+_113970772_113970885	0.325765	AACACUG	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr13_-_110438914_110438937	0.318463	AACACUG	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr11_+_134094508_134094617	0.315858	AACACUG	ENST00000281187.5|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe) 	ENST00000525095.2|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe)
hg19_v2_chr15_+_69591235_69591299	0.313884	AACACUG	ENST00000395407.2|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V 	ENST00000558684.1|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V
hg19_v2_chr5_-_132073210_132073330	0.311041	AACACUG	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr8_+_48920960_48921011	0.309911	AACACUG	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr15_+_52311398_52311461	0.308112	AACACUG	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr10_+_119000604_119000638	0.304204	AACACUG	ENST00000298472.5|SLC18A2|ENSG00000165646.7|solute carrier family 18 (vesicular monoamine transporter), member 2
hg19_v2_chr8_+_30013813_30013872	0.302364	AACACUG	ENST00000221114.3|DCTN6|ENSG00000104671.3|dynactin 6
hg19_v2_chr17_-_74137374_74137385	0.301092	AACACUG	ENST00000322957.6|FOXJ1|ENSG00000129654.7|forkhead box J1
hg19_v2_chr17_+_30771279_30771536	0.294405	AACACUG	ENST00000261712.3|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000578213.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000457654.2|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000579451.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
hg19_v2_chr4_+_159690218_159690290	0.29438	AACACUG	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chrX_+_21857717_21857763	0.287596	AACACUG	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr18_+_60382672_60382701	0.285498	AACACUG	ENST00000400316.4|PHLPP1|ENSG00000081913.9|PH domain and leucine rich repeat protein phosphatase 1 	ENST00000262719.5|PHLPP1|ENSG00000081913.9|PH domain and leucine rich repeat protein phosphatase 1
hg19_v2_chr6_-_10415470_10415508	0.282874	AACACUG	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr11_-_66139570_66139591	0.279018	AACACUG	ENST00000311161.7|SLC29A2|ENSG00000174669.7|solute carrier family 29 (equilibrative nucleoside transporter), member 2
hg19_v2_chr19_+_7895074_7895119	0.278725	AACACUG	ENST00000270530.4|EVI5L|ENSG00000142459.4|ecotropic viral integration site 5-like
hg19_v2_chr6_+_32121218_32121354	0.277862	AACACUG	ENST00000414204.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000361568.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000395523.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr9_+_131644388_131644393	0.269932	AACACUG	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr12_+_22778009_22778112	0.268384	AACACUG	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr17_-_46671323_46671323	0.266128	AACACUG	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr13_+_98605902_98605968	0.264096	AACACUG	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr11_+_94501497_94501577	0.262954	AACACUG	ENST00000317829.8|AMOTL1|ENSG00000166025.13|angiomotin like 1 	ENST00000317837.9|AMOTL1|ENSG00000166025.13|angiomotin like 1 	ENST00000433060.2|AMOTL1|ENSG00000166025.13|angiomotin like 1
hg19_v2_chrX_-_137793826_137793893	0.262026	AACACUG	ENST00000315930.6|FGF13|ENSG00000129682.9|fibroblast growth factor 13
hg19_v2_chr22_-_28197486_28197544	0.258347	AACACUG	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr5_-_115910630_115910657	0.258291	AACACUG	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr17_+_56160768_56160786	0.253015	AACACUG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr12_+_48516357_48516436	0.251705	AACACUG	ENST00000549022.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000547587.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000312352.7|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr13_+_53226963_53227023	0.251217	AACACUG	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr1_-_44497024_44497068	0.248341	AACACUG	ENST00000372306.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000372310.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000475075.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr2_-_218808771_218808851	0.2456	AACACUG	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr1_-_67519782_67519810	0.245401	AACACUG	ENST00000235345.5|SLC35D1|ENSG00000116704.6|solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
hg19_v2_chr1_-_28969517_28969605	0.242447	AACACUG	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr15_+_41523335_41523350	0.241852	AACACUG	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr11_-_73309228_73309257	0.239412	AACACUG	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr4_-_184580353_184580378	0.237046	AACACUG	ENST00000326397.5|RWDD4|ENSG00000182552.10|RWD domain containing 4
hg19_v2_chr9_+_130374537_130374568	0.228	AACACUG	ENST00000373302.3|STXBP1|ENSG00000136854.13|syntaxin binding protein 1 	ENST00000373299.1|STXBP1|ENSG00000136854.13|syntaxin binding protein 1
hg19_v2_chr2_+_234668894_234668934	0.227991	AACACUG	ENST00000305208.5|UGT1A8|ENSG00000242366.2|UDP glucuronosyltransferase 1 family, polypeptide A1 	ENST00000608383.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000360418.3|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr14_-_103523745_103523799	0.224885	AACACUG	ENST00000361246.2|CDC42BPB|ENSG00000198752.5|CDC42 binding protein kinase beta (DMPK-like)
hg19_v2_chr22_+_31556134_31556263	0.222123	AACACUG	ENST00000426256.2|RNF185|ENSG00000138942.11|ring finger protein 185 	ENST00000326132.6|RNF185|ENSG00000138942.11|ring finger protein 185 	ENST00000266252.7|RNF185|ENSG00000138942.11|ring finger protein 185
hg19_v2_chr8_-_89339705_89339721	0.218876	AACACUG	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr3_-_55523966_55523979	0.218785	AACACUG	ENST00000474267.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr7_-_135662056_135662114	0.216284	AACACUG	ENST00000393085.3|MTPN|ENSG00000105887.10|myotrophin 	ENST00000435723.1|MTPN|ENSG00000105887.10|myotrophin
hg19_v2_chr11_+_36589547_36589575	0.215846	AACACUG	ENST00000299440.5|RAG1|ENSG00000166349.5|recombination activating gene 1
hg19_v2_chr18_-_65184217_65184217	0.212511	AACACUG	ENST00000310045.7|DSEL|ENSG00000171451.13|dermatan sulfate epimerase-like
hg19_v2_chr5_-_146833485_146833522	0.208435	AACACUG	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr13_-_30881621_30881675	0.208261	AACACUG	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr8_+_55370487_55370503	0.208143	AACACUG	ENST00000297316.4|SOX17|ENSG00000164736.5|SRY (sex determining region Y)-box 17
hg19_v2_chr7_+_129710350_129710434	0.205005	AACACUG	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr12_-_53473136_53473204	0.199458	AACACUG	ENST00000547837.1|SPRYD3|ENSG00000167778.4|SPRY domain containing 3 	ENST00000301463.4|SPRYD3|ENSG00000167778.4|SPRY domain containing 3
hg19_v2_chr6_+_167412665_167412698	0.198607	AACACUG	ENST00000366847.4|FGFR1OP|ENSG00000213066.7|FGFR1 oncogene partner
hg19_v2_chr10_+_11865347_11865411	0.195885	AACACUG	ENST00000277570.5|PROSER2|ENSG00000148426.8|proline and serine-rich protein 2
hg19_v2_chr7_+_99613195_99613206	0.194452	AACACUG	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr1_+_184356188_184356200	0.193722	AACACUG	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chrX_+_49687216_49687265	0.192984	AACACUG	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr5_+_118407053_118407239	0.191263	AACACUG	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr8_+_26149007_26149061	0.190033	AACACUG	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr1_-_85514120_85514202	0.187901	AACACUG	ENST00000370589.2|MCOLN3|ENSG00000055732.8|mucolipin 3 	ENST00000341115.4|MCOLN3|ENSG00000055732.8|mucolipin 3 	ENST00000370587.1|MCOLN3|ENSG00000055732.8|mucolipin 3
hg19_v2_chr2_+_30369807_30369847	0.186471	AACACUG	ENST00000379520.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000379519.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000261353.4|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila)
hg19_v2_chr15_-_37390482_37390572	0.181603	AACACUG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr4_-_85887503_85887544	0.179214	AACACUG	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr7_+_73703728_73703807	0.17594	AACACUG	ENST00000361545.5|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2 	ENST00000223398.6|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2
hg19_v2_chr10_+_112404132_112404155	0.175713	AACACUG	ENST00000369519.3|RBM20|ENSG00000203867.7|RNA binding motif protein 20
hg19_v2_chr5_+_179125907_179126038	0.172306	AACACUG	ENST00000247461.4|CANX|ENSG00000127022.10|calnexin 	ENST00000452673.2|CANX|ENSG00000127022.10|calnexin 	ENST00000502498.1|CANX|ENSG00000127022.10|calnexin 	ENST00000507307.1|CANX|ENSG00000127022.10|calnexin 	ENST00000513246.1|CANX|ENSG00000127022.10|calnexin 	ENST00000502673.1|CANX|ENSG00000127022.10|calnexin 	ENST00000506654.1|CANX|ENSG00000127022.10|calnexin 	ENST00000512607.2|CANX|ENSG00000127022.10|calnexin 	ENST00000510810.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr18_-_21977748_21977823	0.171631	AACACUG	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr9_+_108210279_108210435	0.168582	AACACUG	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr6_-_132834184_132834337	0.165323	AACACUG	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr17_-_4167142_4167281	0.163713	AACACUG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr13_+_26828275_26828312	0.163387	AACACUG	ENST00000381527.3|CDK8|ENSG00000132964.7|cyclin-dependent kinase 8
hg19_v2_chr5_+_174905398_174905507	0.162875	AACACUG	ENST00000321442.5|SFXN1|ENSG00000164466.8|sideroflexin 1
hg19_v2_chr7_+_114055052_114055378	0.162804	AACACUG	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr2_+_168725458_168725458	0.162782	AACACUG	ENST00000392690.3|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr4_+_75174180_75174196	0.161358	AACACUG	ENST00000413830.1|EPGN|ENSG00000182585.5|epithelial mitogen
hg19_v2_chr1_+_82266053_82266082	0.161076	AACACUG	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr16_-_46865047_46865103	0.1599	AACACUG	ENST00000394806.2|C16orf87|ENSG00000155330.5|chromosome 16 open reading frame 87
hg19_v2_chr1_+_61547894_61547980	0.15872	AACACUG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr1_+_236305826_236305877	0.15783	AACACUG	ENST00000366592.3|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B 	ENST00000366591.4|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B
hg19_v2_chr9_-_138799070_138799284	0.156926	AACACUG	ENST00000389532.4|CAMSAP1|ENSG00000130559.14|calmodulin regulated spectrin-associated protein 1 	ENST00000409386.3|CAMSAP1|ENSG00000130559.14|calmodulin regulated spectrin-associated protein 1
hg19_v2_chr11_-_129872712_129872755	0.156403	AACACUG	ENST00000358825.5|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000360871.3|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000528746.1|PRDM10|ENSG00000170325.10|PR domain containing 10
hg19_v2_chr1_+_151584544_151584558	0.154858	AACACUG	ENST00000458013.2|SNX27|ENSG00000143376.8|sorting nexin family member 27 	ENST00000368843.3|SNX27|ENSG00000143376.8|sorting nexin family member 27
hg19_v2_chr7_+_30323923_30324060	0.152752	AACACUG	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr11_-_74109422_74109518	0.150899	AACACUG	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr17_+_36584662_36584730	0.149499	AACACUG	ENST00000431231.2|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23 	ENST00000437668.3|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23
hg19_v2_chr11_+_33278811_33279133	0.14804	AACACUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr1_-_166845515_166845564	0.146576	AACACUG	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr7_+_107220422_107220468	0.146328	AACACUG	ENST00000005259.4|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr2_-_167232484_167232503	0.1461	AACACUG	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr13_+_42846272_42846334	0.143187	AACACUG	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr9_-_123555655_123555712	0.140689	AACACUG	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr12_+_125478241_125478260	0.139265	AACACUG	ENST00000341446.8|BRI3BP|ENSG00000184992.10|BRI3 binding protein
hg19_v2_chr12_+_7342178_7342215	0.136166	AACACUG	ENST00000266563.5|PEX5|ENSG00000139197.6|peroxisomal biogenesis factor 5 	ENST00000543974.1|PEX5|ENSG00000139197.6|peroxisomal biogenesis factor 5
hg19_v2_chr2_+_138721850_138721890	0.131507	AACACUG	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr4_-_121993673_121993698	0.131418	AACACUG	ENST00000379692.4|NDNF|ENSG00000173376.9|neuron-derived neurotrophic factor
hg19_v2_chr15_-_51058005_51058028	0.131283	AACACUG	ENST00000261854.5|SPPL2A|ENSG00000138600.5|signal peptide peptidase like 2A
hg19_v2_chr22_-_22221900_22221970	0.128659	AACACUG	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr6_+_5085572_5085720	0.124379	AACACUG	ENST00000405617.2|PPP1R3G|ENSG00000219607.2|protein phosphatase 1, regulatory subunit 3G
hg19_v2_chr15_-_25684110_25684212	0.12355	AACACUG	ENST00000232165.3|UBE3A|ENSG00000114062.13|ubiquitin protein ligase E3A
hg19_v2_chr4_-_100815525_100815647	0.123254	AACACUG	ENST00000226522.8|LAMTOR3|ENSG00000109270.8|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 	ENST00000499666.2|LAMTOR3|ENSG00000109270.8|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
hg19_v2_chr5_-_95158375_95158485	0.121298	AACACUG	ENST00000512469.2|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000379979.4|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000505427.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000508780.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase)
hg19_v2_chr11_-_9025541_9025596	0.120983	AACACUG	ENST00000525100.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000309166.3|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000531090.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3
hg19_v2_chr9_-_104500862_104500940	0.119614	AACACUG	ENST00000361820.3|GRIN3A|ENSG00000198785.4|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg19_v2_chr12_+_60083118_60083157	0.119535	AACACUG	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr17_-_46178527_46178566	0.118385	AACACUG	ENST00000393408.3|CBX1|ENSG00000108468.10|chromobox homolog 1
hg19_v2_chr7_-_6388537_6388611	0.118088	AACACUG	ENST00000313324.4|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A 	ENST00000530143.1|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A
hg19_v2_chr1_-_231560790_231560790	0.117434	AACACUG	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr3_-_171178157_171178225	0.11546	AACACUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr17_+_38278530_38278605	0.114044	AACACUG	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr10_+_65281123_65281183	0.107117	AACACUG	ENST00000298249.4|REEP3|ENSG00000165476.8|receptor accessory protein 3 	ENST00000373758.4|REEP3|ENSG00000165476.8|receptor accessory protein 3
hg19_v2_chr6_-_137815524_137815537	0.10438	AACACUG	ENST00000367734.2|OLIG3|ENSG00000177468.5|oligodendrocyte transcription factor 3
hg19_v2_chr5_+_56205081_56205092	0.104051	AACACUG	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr3_+_62304712_62304732	0.103761	AACACUG	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr3_+_197687071_197687128	0.102889	AACACUG	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr20_+_57226284_57226345	0.102238	AACACUG	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr6_-_30524951_30524957	0.100836	AACACUG	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr10_-_121356007_121356147	0.100731	AACACUG	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr4_-_16228120_16228164	0.0998339	AACACUG	ENST00000405303.2|TAPT1|ENSG00000169762.12|transmembrane anterior posterior transformation 1
hg19_v2_chr14_+_69865401_69865426	0.0991224	AACACUG	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr10_+_76586348_76586400	0.0983307	AACACUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr5_-_95297678_95297775	0.0958562	AACACUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr8_-_97173020_97173041	0.0954437	AACACUG	ENST00000287020.5|GDF6|ENSG00000156466.8|growth differentiation factor 6
hg19_v2_chr16_-_30798492_30798535	0.0937405	AACACUG	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr1_+_24742264_24742312	0.0935342	AACACUG	ENST00000374399.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000003912.3|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000358028.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000339255.2|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3
hg19_v2_chr3_-_195808952_195808972	0.0930777	AACACUG	ENST00000540528.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000392396.3|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000535031.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000420415.1|TFRC|ENSG00000072274.8|transferrin receptor
hg19_v2_chr7_-_156685890_156685924	0.0917033	AACACUG	ENST00000353442.5|LMBR1|ENSG00000105983.15|limb development membrane protein 1
hg19_v2_chr13_+_33160553_33160564	0.0912258	AACACUG	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr6_+_163835669_163835693	0.0910185	AACACUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr17_+_72209653_72209722	0.0893433	AACACUG	ENST00000269346.4|TTYH2|ENSG00000141540.6|tweety family member 2
hg19_v2_chr5_-_148930960_148931013	0.0892108	AACACUG	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr7_+_35840542_35840671	0.0864968	AACACUG	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr4_+_128886532_128886576	0.0864089	AACACUG	ENST00000444616.1|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29 	ENST00000388795.5|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29
hg19_v2_chr1_-_91487013_91487070	0.0856827	AACACUG	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr16_+_3507985_3508061	0.0842473	AACACUG	ENST00000421765.3|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000610180.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000608993.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000360862.5|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000414063.2|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr4_+_144257915_144258009	0.0809049	AACACUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr10_-_62704005_62704045	0.0808561	AACACUG	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr1_-_24306798_24306828	0.0797972	AACACUG	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr19_-_10614386_10614417	0.0784616	AACACUG	ENST00000171111.5|KEAP1|ENSG00000079999.9|kelch-like ECH-associated protein 1
hg19_v2_chr1_+_114472222_114472377	0.078443	AACACUG	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr11_+_113930291_113930339	0.0776823	AACACUG	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr12_-_7079805_7079988	0.0766497	AACACUG	ENST00000536316.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000542912.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000440277.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000545167.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000546111.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000399433.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000535923.1|PHB2|ENSG00000215021.4|prohibitin 2
hg19_v2_chr3_-_136471204_136471249	0.0760556	AACACUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr2_+_96931834_96931870	0.0759778	AACACUG	ENST00000488633.1|CIAO1|ENSG00000144021.2|cytosolic iron-sulfur protein assembly 1
hg19_v2_chr1_+_218458625_218458660	0.0749545	AACACUG	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr20_+_55204351_55204377	0.0748572	AACACUG	ENST00000201031.2|TFAP2C|ENSG00000087510.5|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
hg19_v2_chr11_+_45825896_45825965	0.0744685	AACACUG	ENST00000314134.3|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1
hg19_v2_chr1_+_183441600_183441616	0.0736951	AACACUG	ENST00000367537.3|SMG7|ENSG00000116698.16|SMG7 nonsense mediated mRNA decay factor
hg19_v2_chr1_+_44173179_44173244	0.0708722	AACACUG	ENST00000361392.4|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000361400.4|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000262915.3|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000372375.2|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000351035.3|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000372374.2|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000353126.3|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000545417.1|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000330208.2|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000335430.6|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000372377.4|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENST00000347631.2|ST3GAL3|ENSG00000126091.15|ST3 beta-galactoside alpha-2,3-sialyltransferase 3
hg19_v2_chr9_-_116102530_116102549	0.0707073	AACACUG	ENST00000374195.3|WDR31|ENSG00000148225.11|WD repeat domain 31 	ENST00000341761.4|WDR31|ENSG00000148225.11|WD repeat domain 31
hg19_v2_chr9_-_27529726_27529827	0.0699359	AACACUG	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr17_+_28705921_28706000	0.0697763	AACACUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr10_+_93558069_93558154	0.0682864	AACACUG	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr6_+_127439749_127439829	0.0671801	AACACUG	ENST00000356698.4|RSPO3|ENSG00000146374.9|R-spondin 3
hg19_v2_chr8_+_41435696_41435734	0.0667683	AACACUG	ENST00000396987.3|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6 	ENST00000519853.1|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6
hg19_v2_chr5_-_146258205_146258230	0.0667601	AACACUG	ENST00000394413.3|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr16_-_69364467_69364516	0.0666303	AACACUG	ENST00000288022.1|PDF|ENSG00000258429.1|peptide deformylase (mitochondrial)
hg19_v2_chr17_+_49230897_49231026	0.0652775	AACACUG	ENST00000393196.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000393198.3|NME1-NME2|ENSG00000243678.7|NME1-NME2 readthrough 	ENST00000336097.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000480143.1|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000511355.1|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000393193.2|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000376392.6|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000608447.1|NME1-NME2|ENSG00000243678.7|NME1-NME2 readthrough 	ENST00000555572.1|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000013034.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1
hg19_v2_chr14_-_31676964_31677017	0.0652157	AACACUG	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr12_-_42632016_42632089	0.0637198	AACACUG	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr7_+_128379346_128379447	0.0633058	AACACUG	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr1_+_25757376_25757411	0.0612391	AACACUG	ENST00000399766.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000399763.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000374343.4|TMEM57|ENSG00000204178.5|transmembrane protein 57
hg19_v2_chr17_+_66508537_66508650	0.0598191	AACACUG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr5_+_112312416_112312440	0.0595507	AACACUG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr20_+_47538357_47538427	0.0595184	AACACUG	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr17_+_68165657_68165688	0.0593569	AACACUG	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr12_+_45609893_45609909	0.0592477	AACACUG	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr19_-_46296011_46296061	0.0590896	AACACUG	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr10_+_116581503_116581570	0.0586627	AACACUG	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr3_+_33318914_33318985	0.0585575	AACACUG	ENST00000484457.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538892.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538181.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000446237.3|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000507198.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2
hg19_v2_chr6_+_170102210_170102275	0.0571251	AACACUG	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr2_+_206547215_206547232	0.0565949	AACACUG	ENST00000360409.3|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540178.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540841.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000355117.4|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000450507.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000417189.1|NRP2|ENSG00000118257.12|neuropilin 2
hg19_v2_chr15_-_65715401_65715421	0.0560682	AACACUG	ENST00000352385.2|IGDCC4|ENSG00000103742.7|immunoglobulin superfamily, DCC subclass, member 4
hg19_v2_chr12_+_50898881_50898907	0.05528	AACACUG	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr22_+_38201114_38201214	0.0549191	AACACUG	ENST00000340857.2|H1F0|ENSG00000189060.4|H1 histone family, member 0
hg19_v2_chr2_+_148602058_148602185	0.0515753	AACACUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr15_-_72410109_72410161	0.0512352	AACACUG	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr5_-_168006591_168006638	0.0493589	AACACUG	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr9_+_110045537_110045572	0.0489339	AACACUG	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr2_+_135676381_135676435	0.0486743	AACACUG	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr2_-_68479614_68479685	0.0469841	AACACUG	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr4_-_129208940_129208976	0.0468081	AACACUG	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chrX_-_131352152_131352204	0.0444797	AACACUG	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr11_-_113345995_113346016	0.0431008	AACACUG	ENST00000355319.2|DRD2|ENSG00000149295.9|dopamine receptor D2 	ENST00000542616.1|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr2_+_64681219_64681231	0.0414679	AACACUG	ENST00000238875.5|LGALSL|ENSG00000119862.8|lectin, galactoside-binding-like
hg19_v2_chr6_-_13711773_13711796	0.0410114	AACACUG	ENST00000011619.3|RANBP9|ENSG00000010017.9|RAN binding protein 9
hg19_v2_chr8_-_95908902_95908927	0.0401892	AACACUG	ENST00000520509.1|CCNE2|ENSG00000175305.12|cyclin E2
hg19_v2_chr7_-_43965937_43966015	0.0397502	AACACUG	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr3_+_113465866_113465925	0.0392807	AACACUG	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr2_+_10861775_10861786	0.0391666	AACACUG	ENST00000272238.4|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 	ENST00000381661.3|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
hg19_v2_chr15_-_85259330_85259352	0.0380203	AACACUG	ENST00000560266.1|SEC11A|ENSG00000140612.9|SEC11 homolog A (S. cerevisiae)
hg19_v2_chr2_-_54087066_54087297	0.0377819	AACACUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr11_-_3013603_3013621	0.0366028	AACACUG	ENST00000380542.4|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4 	ENST00000526115.1|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4
hg19_v2_chr1_+_29063271_29063283	0.0354172	AACACUG	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr3_-_58419537_58419584	0.0348998	AACACUG	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr12_+_98987369_98987503	0.0347024	AACACUG	ENST00000401722.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000188376.5|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000228318.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551917.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548046.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000552981.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551265.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000550695.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000547534.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000549338.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548847.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
hg19_v2_chr1_-_171711387_171711420	0.0332466	AACACUG	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chr5_+_177631497_177631508	0.0328397	AACACUG	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr22_-_28315115_28315260	0.0325819	AACACUG	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr18_+_32558208_32558340	0.032131	AACACUG	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr20_+_5107420_5107432	0.0302546	AACACUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr6_-_46138676_46138726	0.0282828	AACACUG	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chr20_-_524455_524466	0.0275742	AACACUG	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr16_+_53088885_53088961	0.0274256	AACACUG	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr2_+_148778570_148778589	0.0255465	AACACUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr16_-_69368774_69368774	0.0248124	AACACUG	ENST00000562949.1|RP11-343C2.12|ENSG00000272617.1|Conserved oligomeric Golgi complex subunit 8
hg19_v2_chr12_+_133066137_133066137	0.0232859	AACACUG	ENST00000434748.2|FBRSL1|ENSG00000112787.8|fibrosin-like 1
hg19_v2_chr1_-_200379180_200379191	0.0232637	AACACUG	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr1_-_57889687_57889754	0.0230619	AACACUG	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr21_-_39870339_39870443	0.0217819	AACACUG	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr2_-_240322643_240322661	0.0207545	AACACUG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr7_-_11871815_11871831	0.0197489	AACACUG	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr9_+_131843377_131843413	0.0196275	AACACUG	ENST00000372546.4|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000406974.3|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000540102.1|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1
hg19_v2_chr5_-_142783175_142783297	0.0193723	AACACUG	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr17_+_26989109_26989248	0.0191402	AACACUG	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr19_-_41196534_41196568	0.0170044	AACACUG	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr8_-_55014415_55014595	0.0156916	AACACUG	ENST00000522007.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000521898.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000518546.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000316963.3|LYPLA1|ENSG00000120992.13|lysophospholipase I
hg19_v2_chr14_-_64010046_64010107	0.0156141	AACACUG	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr4_-_76598296_76598318	0.0146884	AACACUG	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr13_-_50367057_50367142	0.0141219	AACACUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr9_-_101984184_101984238	0.0136372	AACACUG	ENST00000476832.1|ALG2|ENSG00000119523.8|ALG2, alpha-1,3/1,6-mannosyltransferase
hg19_v2_chr14_+_96829814_96829869	0.0107409	AACACUG	ENST00000555181.1|GSKIP|ENSG00000100744.10|GSK3B interacting protein 	ENST00000553699.1|GSKIP|ENSG00000100744.10|GSK3B interacting protein 	ENST00000554182.1|GSKIP|ENSG00000100744.10|GSK3B interacting protein
hg19_v2_chr1_-_205719295_205719404	0.0084559	AACACUG	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr17_-_58042075_58042135	0.00762038	AACACUG	ENST00000305783.8|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000589113.1|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000442346.2|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1
hg19_v2_chr5_-_145214848_145214886	0.00635273	AACACUG	ENST00000505416.1|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000334744.4|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000358004.2|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000511435.1|PRELID2|ENSG00000186314.7|PRELI domain containing 2
hg19_v2_chr1_+_28586006_28586044	0.00620556	AACACUG	ENST00000253063.3|SESN2|ENSG00000130766.4|sestrin 2
hg19_v2_chr5_+_138629417_138629467	0.00547684	AACACUG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr14_+_61201445_61201530	0.00495864	AACACUG	ENST00000261245.4|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1 	ENST00000539616.2|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1
hg19_v2_chr10_-_94333784_94333860	0.00481202	AACACUG	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr10_+_76871454_76871467	0.00475143	AACACUG	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr16_-_20911641_20911720	0.00456582	AACACUG	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr1_+_87380299_87380475	0.00299008	AACACUG	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr5_-_154317740_154317787	0.00229089	AACACUG	ENST00000285873.7|GEMIN5|ENSG00000082516.8|gem (nuclear organelle) associated protein 5
hg19_v2_chr7_-_74867509_74867634	0.00201371	AACACUG	ENST00000426327.3|GATSL2|ENSG00000198750.7|GATS protein-like 2
