hg19_v2_chr3_+_11034403_11034492	1.16768	AACAGUC	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chrY_+_14813160_14813160	1.08205	AACAGUC	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr2_-_166930131_166930149	0.801769	AACAGUC	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chrX_+_152907913_152907988	0.734395	AACAGUC	ENST00000370167.4|DUSP9|ENSG00000130829.13|dual specificity phosphatase 9
hg19_v2_chrX_-_25034065_25034088	0.674469	AACAGUC	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr11_-_32452357_32452363	0.578605	AACAGUC	ENST00000379079.2|WT1|ENSG00000184937.8|Wilms tumor 1 	ENST00000530998.1|WT1|ENSG00000184937.8|Wilms tumor 1
hg19_v2_chr16_-_51185149_51185160	0.577258	AACAGUC	ENST00000566102.1|SALL1|ENSG00000103449.7|spalt-like transcription factor 1 	ENST00000541611.1|SALL1|ENSG00000103449.7|spalt-like transcription factor 1
hg19_v2_chr11_+_109292846_109292875	0.558495	AACAGUC	ENST00000327419.6|C11orf87|ENSG00000185742.6|chromosome 11 open reading frame 87
hg19_v2_chr10_+_68685764_68685801	0.511011	AACAGUC	ENST00000361320.4|LRRTM3|ENSG00000198739.6|leucine rich repeat transmembrane neuronal 3
hg19_v2_chr4_+_134070439_134070470	0.461007	AACAGUC	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr4_+_57138437_57138570	0.448743	AACAGUC	ENST00000504228.1|KIAA1211|ENSG00000109265.8|KIAA1211 	ENST00000541073.1|KIAA1211|ENSG00000109265.8|KIAA1211
hg19_v2_chr5_+_63802109_63802139	0.448471	AACAGUC	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr3_+_38495333_38495422	0.424243	AACAGUC	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr22_-_22221900_22221970	0.404516	AACAGUC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr18_-_74207146_74207183	0.391101	AACAGUC	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr22_-_37823468_37823528	0.388305	AACAGUC	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr6_+_105404899_105404931	0.375767	AACAGUC	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr3_-_114790179_114790222	0.354086	AACAGUC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr4_+_145567173_145567296	0.352815	AACAGUC	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr11_-_129062093_129062184	0.319783	AACAGUC	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr7_-_155604967_155605105	0.315203	AACAGUC	ENST00000297261.2|SHH|ENSG00000164690.3|sonic hedgehog
hg19_v2_chr3_-_9291063_9291136	0.309027	AACAGUC	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr22_-_37099555_37099603	0.306537	AACAGUC	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr3_+_49591881_49591940	0.298736	AACAGUC	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr9_-_3525968_3526016	0.291157	AACAGUC	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr1_-_217262969_217262995	0.286893	AACAGUC	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr2_-_40679186_40679297	0.269104	AACAGUC	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr5_+_153825510_153825529	0.268331	AACAGUC	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr5_+_157170703_157170758	0.243217	AACAGUC	ENST00000286307.5|LSM11|ENSG00000155858.5|LSM11, U7 small nuclear RNA associated
hg19_v2_chr12_+_4918342_4918475	0.23304	AACAGUC	ENST00000280684.3|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6 	ENST00000433855.1|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6
hg19_v2_chr1_+_202091980_202091991	0.231335	AACAGUC	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chr5_-_111093406_111093458	0.229181	AACAGUC	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr11_+_119019722_119019769	0.228144	AACAGUC	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr18_+_49866496_49866548	0.227907	AACAGUC	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr9_+_32783497_32783551	0.215712	AACAGUC	ENST00000342743.5|TMEM215|ENSG00000188133.5|transmembrane protein 215
hg19_v2_chr6_+_16238786_16238854	0.205451	AACAGUC	ENST00000259727.4|GMPR|ENSG00000137198.5|guanosine monophosphate reductase
hg19_v2_chr6_-_116381918_116381977	0.204773	AACAGUC	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr6_-_16761678_16761721	0.19097	AACAGUC	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr2_+_157291953_157292003	0.188679	AACAGUC	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr20_-_7921090_7921121	0.183871	AACAGUC	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr18_-_5895954_5895954	0.17868	AACAGUC	ENST00000581347.2|TMEM200C|ENSG00000206432.4|transmembrane protein 200C
hg19_v2_chr9_+_103204553_103204560	0.177422	AACAGUC	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr1_+_244214577_244214593	0.177229	AACAGUC	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr4_+_144106080_144106144	0.175952	AACAGUC	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr14_-_35182994_35183034	0.171857	AACAGUC	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr15_+_79575073_79575146	0.170079	AACAGUC	ENST00000421388.2|ANKRD34C|ENSG00000235711.3|ankyrin repeat domain 34C
hg19_v2_chrX_+_144908928_144908928	0.165427	AACAGUC	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chr21_-_40685477_40685496	0.163704	AACAGUC	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr16_+_7382745_7382769	0.163661	AACAGUC	ENST00000436368.2|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000311745.5|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000355637.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000340209.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr8_+_120079478_120079499	0.162964	AACAGUC	ENST00000332843.2|COLEC10|ENSG00000184374.2|collectin sub-family member 10 (C-type lectin)
hg19_v2_chr4_-_71705590_71705662	0.161275	AACAGUC	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr20_-_4982132_4982164	0.158961	AACAGUC	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr8_+_77593448_77593471	0.1569	AACAGUC	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr19_-_40854417_40854454	0.156152	AACAGUC	ENST00000582006.1|C19orf47|ENSG00000160392.9|chromosome 19 open reading frame 47 	ENST00000582783.1|C19orf47|ENSG00000160392.9|chromosome 19 open reading frame 47
hg19_v2_chr2_+_166326157_166326216	0.155665	AACAGUC	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chrX_+_12156582_12156603	0.153099	AACAGUC	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr16_-_46865047_46865103	0.150671	AACAGUC	ENST00000394806.2|C16orf87|ENSG00000155330.5|chromosome 16 open reading frame 87
hg19_v2_chr12_-_498620_498693	0.149619	AACAGUC	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr18_+_76740189_76740275	0.147374	AACAGUC	ENST00000537592.2|SALL3|ENSG00000256463.4|spalt-like transcription factor 3 	ENST00000575389.2|SALL3|ENSG00000256463.4|spalt-like transcription factor 3
hg19_v2_chr1_-_157015162_157015162	0.14347	AACAGUC	ENST00000368194.3|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr3_+_180630090_180630311	0.13781	AACAGUC	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr1_+_18958008_18958023	0.137085	AACAGUC	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr12_-_117628333_117628339	0.135285	AACAGUC	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr1_-_57889687_57889754	0.132299	AACAGUC	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr14_-_31676964_31677017	0.131834	AACAGUC	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr1_-_16678914_16678989	0.126371	AACAGUC	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr3_-_13009168_13009236	0.126053	AACAGUC	ENST00000273221.4|IQSEC1|ENSG00000144711.9|IQ motif and Sec7 domain 1
hg19_v2_chr4_-_153457197_153457268	0.124211	AACAGUC	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr16_+_29823552_29823612	0.124074	AACAGUC	ENST00000300797.6|PRRT2|ENSG00000167371.12|proline-rich transmembrane protein 2
hg19_v2_chr16_-_62070305_62070310	0.122771	AACAGUC	ENST00000584337.1|CDH8|ENSG00000150394.9|cadherin 8, type 2
hg19_v2_chr1_-_200992827_200992867	0.116655	AACAGUC	ENST00000332129.2|KIF21B|ENSG00000116852.10|kinesin family member 21B 	ENST00000422435.2|KIF21B|ENSG00000116852.10|kinesin family member 21B
hg19_v2_chr2_+_166095898_166095940	0.114868	AACAGUC	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr12_+_113229737_113229821	0.114864	AACAGUC	ENST00000551052.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse) 	ENST00000415485.3|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr11_+_18344106_18344143	0.112102	AACAGUC	ENST00000534641.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000525831.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000265963.4|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa
hg19_v2_chr19_+_1524072_1524078	0.110127	AACAGUC	ENST00000454744.2|PLK5|ENSG00000185988.7|polo-like kinase 5
hg19_v2_chr11_-_12030629_12030644	0.103777	AACAGUC	ENST00000396505.2|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr8_-_89339705_89339721	0.0938002	AACAGUC	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr9_+_115249100_115249358	0.0933816	AACAGUC	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr2_-_25475120_25475180	0.0893956	AACAGUC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr11_+_34073195_34073266	0.0833126	AACAGUC	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr3_+_197687071_197687128	0.0823783	AACAGUC	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr6_+_43445261_43445336	0.081711	AACAGUC	ENST00000372444.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372445.5|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000436109.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372454.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000442878.2|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000259751.1|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372452.1|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral) 	ENST00000372449.1|TJAP1|ENSG00000137221.10|tight junction associated protein 1 (peripheral)
hg19_v2_chr1_+_209859510_209859550	0.0817007	AACAGUC	ENST00000367028.2|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1 	ENST00000261465.1|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v2_chr19_+_18794470_18794512	0.0813428	AACAGUC	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr2_+_85198216_85198305	0.0809159	AACAGUC	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr5_+_61602055_61602083	0.0789908	AACAGUC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr15_-_34628951_34629045	0.0785417	AACAGUC	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr9_+_112403088_112403142	0.0782513	AACAGUC	ENST00000448454.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr13_-_50510434_50510490	0.0781537	AACAGUC	ENST00000361840.3|SPRYD7|ENSG00000123178.10|SPRY domain containing 7
hg19_v2_chr10_-_102027420_102027442	0.0763086	AACAGUC	ENST00000354105.4|CWF19L1|ENSG00000095485.12|CWF19-like 1, cell cycle control (S. pombe)
hg19_v2_chr1_-_154842741_154842772	0.075945	AACAGUC	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr7_-_138666053_138666146	0.0742508	AACAGUC	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr1_+_222791417_222791455	0.0715969	AACAGUC	ENST00000344922.5|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344441.6|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344507.1|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr7_+_140774032_140774032	0.0703831	AACAGUC	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr9_+_103235365_103235419	0.0693432	AACAGUC	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr5_+_60628074_60628100	0.0684916	AACAGUC	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr2_-_228028829_228028858	0.0666716	AACAGUC	ENST00000396625.3|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4 	ENST00000329662.7|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4
hg19_v2_chr22_+_35653445_35653501	0.0662776	AACAGUC	ENST00000420166.1|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000444518.2|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000455359.1|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000216106.5|HMGXB4|ENSG00000100281.9|HMG box domain containing 4
hg19_v2_chr10_-_32636106_32636150	0.065905	AACAGUC	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr15_+_72766651_72766680	0.0639475	AACAGUC	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chrX_+_40944871_40944888	0.0619111	AACAGUC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr1_-_53018654_53018777	0.061134	AACAGUC	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr1_-_149889382_149889434	0.0608677	AACAGUC	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr4_+_144257915_144258009	0.060831	AACAGUC	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_+_136172820_136172846	0.0607163	AACAGUC	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr7_-_75988321_75988348	0.0607121	AACAGUC	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr1_-_38019878_38019905	0.0594992	AACAGUC	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr1_-_101360331_101360373	0.059158	AACAGUC	ENST00000416479.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2 	ENST00000370113.3|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr14_-_61190754_61190852	0.0578357	AACAGUC	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr4_+_7045042_7045262	0.0576467	AACAGUC	ENST00000310074.7|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B 	ENST00000512388.1|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B
hg19_v2_chr4_-_102268628_102268693	0.0575372	AACAGUC	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr17_-_37557846_37557920	0.0573165	AACAGUC	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr6_-_111136513_111136525	0.0570668	AACAGUC	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr12_+_65563329_65563373	0.0568985	AACAGUC	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr18_-_29264669_29264717	0.0553651	AACAGUC	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr14_-_95786200_95786257	0.0546236	AACAGUC	ENST00000298912.4|CLMN|ENSG00000165959.7|calmin (calponin-like, transmembrane)
hg19_v2_chr3_+_186501336_186501386	0.0531159	AACAGUC	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr17_+_43971643_43971748	0.0530893	AACAGUC	ENST00000344290.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000262410.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000351559.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000340799.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000535772.1|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000347967.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau
hg19_v2_chr17_-_16118835_16118867	0.0530141	AACAGUC	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr17_+_47865917_47866068	0.0526767	AACAGUC	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr3_-_119813264_119813272	0.0524812	AACAGUC	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr15_-_31283798_31283851	0.0517371	AACAGUC	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr5_-_132299313_132299334	0.0514578	AACAGUC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr14_-_21905395_21905419	0.05068	AACAGUC	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr1_+_57110972_57111062	0.0501148	AACAGUC	ENST00000371244.4|PRKAA2|ENSG00000162409.6|protein kinase, AMP-activated, alpha 2 catalytic subunit
hg19_v2_chr2_+_32288725_32288776	0.049067	AACAGUC	ENST00000315285.3|SPAST|ENSG00000021574.7|spastin
hg19_v2_chr1_+_20208870_20209006	0.0488329	AACAGUC	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr15_+_44719394_44719579	0.0484798	AACAGUC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr5_-_131826457_131826514	0.048349	AACAGUC	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr12_+_62654119_62654142	0.0481093	AACAGUC	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr13_-_72441315_72441454	0.0461916	AACAGUC	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr16_+_58497567_58497586	0.0446234	AACAGUC	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr9_-_139372141_139372141	0.0434706	AACAGUC	ENST00000313050.7|SEC16A|ENSG00000148396.14|SEC16 homolog A (S. cerevisiae)
hg19_v2_chr7_+_94139105_94139197	0.0433264	AACAGUC	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr9_+_15553055_15553101	0.0421357	AACAGUC	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr9_+_128024067_128024190	0.0418892	AACAGUC	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chr9_+_115983808_115983880	0.0416043	AACAGUC	ENST00000374210.6|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1 	ENST00000374212.4|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1
hg19_v2_chr12_+_104850740_104850768	0.0389672	AACAGUC	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr3_+_62304712_62304732	0.0380109	AACAGUC	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr16_+_69599861_69599887	0.0376766	AACAGUC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr21_-_39288743_39288765	0.0373394	AACAGUC	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr8_-_119634141_119634234	0.0370756	AACAGUC	ENST00000409003.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526328.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000314727.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526765.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12
hg19_v2_chr3_-_133614597_133614681	0.0370239	AACAGUC	ENST00000285208.4|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family 	ENST00000460865.3|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family
hg19_v2_chr17_+_56160768_56160786	0.0364319	AACAGUC	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr21_+_33245548_33245628	0.0354304	AACAGUC	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chr2_-_99552620_99552722	0.0353341	AACAGUC	ENST00000428096.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000397899.2|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000420294.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like
hg19_v2_chr22_+_21771656_21771693	0.0349278	AACAGUC	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr1_-_91487013_91487070	0.0348263	AACAGUC	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr6_+_87865262_87865339	0.0347302	AACAGUC	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr1_-_52831796_52831882	0.0344977	AACAGUC	ENST00000284376.3|CC2D1B|ENSG00000154222.10|coiled-coil and C2 domain containing 1B 	ENST00000438831.1|CC2D1B|ENSG00000154222.10|coiled-coil and C2 domain containing 1B 	ENST00000371586.2|CC2D1B|ENSG00000154222.10|coiled-coil and C2 domain containing 1B
hg19_v2_chr20_+_57226284_57226345	0.0336736	AACAGUC	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr6_+_163835669_163835693	0.0335015	AACAGUC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr6_+_42749759_42749780	0.0332394	AACAGUC	ENST00000314073.5|GLTSCR1L|ENSG00000112624.8|GLTSCR1-like
hg19_v2_chr1_+_97187318_97187380	0.032883	AACAGUC	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr12_+_22778009_22778112	0.0316652	AACAGUC	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr16_-_47007545_47007699	0.0314185	AACAGUC	ENST00000317089.5|DNAJA2|ENSG00000069345.7|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v2_chr4_+_26862400_26862416	0.0306826	AACAGUC	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr9_-_88714421_88714506	0.0306579	AACAGUC	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chr7_+_107384142_107384173	0.0302883	AACAGUC	ENST00000440859.3|CBLL1|ENSG00000105879.7|Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
hg19_v2_chr14_-_74253948_74253964	0.029071	AACAGUC	ENST00000394071.2|ELMSAN1|ENSG00000156030.8|ELM2 and Myb/SANT-like domain containing 1
hg19_v2_chr5_+_78532003_78532017	0.0289289	AACAGUC	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr17_-_73775839_73775868	0.028598	AACAGUC	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr2_+_48010221_48010307	0.0285549	AACAGUC	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr2_-_26101374_26101389	0.0284996	AACAGUC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr17_+_21279509_21279697	0.0284085	AACAGUC	ENST00000583088.1|KCNJ12|ENSG00000184185.5|potassium inwardly-rectifying channel, subfamily J, member 12
hg19_v2_chr17_-_65362678_65362743	0.0282072	AACAGUC	ENST00000357146.4|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 	ENST00000356126.3|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
hg19_v2_chr1_+_39456895_39456986	0.0275922	AACAGUC	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr9_+_77112244_77112281	0.0256589	AACAGUC	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr13_+_100258907_100258953	0.0250779	AACAGUC	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
hg19_v2_chr1_+_107683644_107683673	0.0237331	AACAGUC	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr8_-_141645645_141645783	0.0235712	AACAGUC	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr7_-_44530479_44530518	0.0230602	AACAGUC	ENST00000355451.7|NUDCD3|ENSG00000015676.13|NudC domain containing 3
hg19_v2_chr15_+_50716576_50716624	0.0216605	AACAGUC	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr14_-_54908043_54908149	0.0216418	AACAGUC	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr4_-_1714037_1714071	0.0215279	AACAGUC	ENST00000488267.1|SLBP|ENSG00000163950.8|stem-loop binding protein 	ENST00000429429.2|SLBP|ENSG00000163950.8|stem-loop binding protein 	ENST00000480936.1|SLBP|ENSG00000163950.8|stem-loop binding protein
hg19_v2_chr7_+_28452130_28452154	0.0214218	AACAGUC	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr10_+_93683519_93683594	0.0213835	AACAGUC	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr3_-_15563229_15563265	0.0204432	AACAGUC	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr19_+_18451439_18451456	0.0202945	AACAGUC	ENST00000597431.2|PGPEP1|ENSG00000130517.9|pyroglutamyl-peptidase I
hg19_v2_chr2_+_176964458_176964540	0.0202037	AACAGUC	ENST00000406506.2|HOXD12|ENSG00000170178.5|homeobox D12 	ENST00000404162.2|HOXD12|ENSG00000170178.5|homeobox D12
hg19_v2_chr14_-_30396948_30396998	0.0200635	AACAGUC	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr3_+_107241783_107241850	0.0195235	AACAGUC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr1_-_169863016_169863109	0.01944	AACAGUC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr6_+_111195973_111195994	0.018962	AACAGUC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr10_+_11206925_11206993	0.0186483	AACAGUC	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr12_+_69633317_69633366	0.0184767	AACAGUC	ENST00000435070.2|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr4_+_52709229_52709345	0.0183774	AACAGUC	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr17_-_1083078_1083294	0.0164597	AACAGUC	ENST00000574266.1|ABR|ENSG00000159842.10|active BCR-related 	ENST00000302538.5|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chr8_-_74884511_74884546	0.0151113	AACAGUC	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr7_+_12250886_12250933	0.0150891	AACAGUC	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr14_-_64010046_64010107	0.0137297	AACAGUC	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr11_-_94964354_94964374	0.0130925	AACAGUC	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr8_+_133787586_133787673	0.012729	AACAGUC	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr16_+_83841448_83841560	0.0122461	AACAGUC	ENST00000433866.2|HSBP1|ENSG00000230989.2|heat shock factor binding protein 1
hg19_v2_chr22_+_41487711_41487798	0.0115423	AACAGUC	ENST00000263253.7|EP300|ENSG00000100393.9|E1A binding protein p300
hg19_v2_chr5_-_139422654_139422898	0.011114	AACAGUC	ENST00000289409.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000358522.3|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000378238.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000289422.7|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000361474.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000545385.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000394770.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000541337.1|NRG2|ENSG00000158458.15|neuregulin 2
hg19_v2_chr8_-_41909496_41909512	0.00927395	AACAGUC	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr2_-_166060571_166060582	0.00873853	AACAGUC	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr2_+_5832799_5832799	0.00862141	AACAGUC	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr6_+_84569359_84569445	0.00829112	AACAGUC	ENST00000369681.5|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4 	ENST00000369679.4|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4
hg19_v2_chr1_+_206557366_206557368	0.00825216	AACAGUC	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr8_-_30670384_30670394	0.00804417	AACAGUC	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chrX_-_153363188_153363212	0.00766875	AACAGUC	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr5_+_14664762_14664868	0.00759568	AACAGUC	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr1_-_160232197_160232284	0.00700697	AACAGUC	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr5_+_138678131_138678169	0.00561276	AACAGUC	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr22_+_20067738_20067771	0.00548087	AACAGUC	ENST00000351989.3|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit 	ENST00000383024.2|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit
hg19_v2_chr2_-_200322723_200322819	0.00522425	AACAGUC	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr18_+_9913977_9914088	0.00496681	AACAGUC	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr12_+_68042495_68042508	0.00428154	AACAGUC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr22_+_29168652_29168770	0.00358769	AACAGUC	ENST00000249064.4|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000444523.1|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000448492.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000421503.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117
hg19_v2_chr5_+_135468516_135468621	0.00354004	AACAGUC	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr5_-_114880533_114880591	0.00322433	AACAGUC	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr20_-_60640866_60640901	0.00277931	AACAGUC	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr13_+_48877895_48877929	0.00270311	AACAGUC	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr3_-_48700310_48700348	0.00169009	AACAGUC	ENST00000164024.4|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3 	ENST00000544264.1|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3
hg19_v2_chr17_+_57784826_57784883	0.000918731	AACAGUC	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr6_+_134210243_134210276	0.000881381	AACAGUC	ENST00000367882.4|TCF21|ENSG00000118526.6|transcription factor 21
hg19_v2_chr17_-_48785216_48785291	0.000682976	AACAGUC	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr7_-_26904317_26904362	0.000372304	AACAGUC	ENST00000345317.2|SKAP2|ENSG00000005020.8|src kinase associated phosphoprotein 2
hg19_v2_chr8_+_67579807_67579887	0.000143281	AACAGUC	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
