hg19_v2_chr11_+_69061594_69061635	0.6526	AACGGAA	ENST00000441339.2|MYEOV|ENSG00000172927.3|myeloma overexpressed 	ENST00000308946.3|MYEOV|ENSG00000172927.3|myeloma overexpressed 	ENST00000535407.1|MYEOV|ENSG00000172927.3|myeloma overexpressed
hg19_v2_chr8_-_134115118_134115298	0.226289	AACGGAA	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr17_-_46623441_46623441	0.191725	AACGGAA	ENST00000330070.4|HOXB2|ENSG00000173917.9|homeobox B2
hg19_v2_chr2_+_27193480_27193548	0.17292	AACGGAA	ENST00000233121.2|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3 	ENST00000405074.3|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3
hg19_v2_chr5_+_149887672_149887698	0.162988	AACGGAA	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr1_-_19283163_19283180	0.14583	AACGGAA	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr12_-_58240470_58240522	0.142975	AACGGAA	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr12_+_122242597_122242638	0.141358	AACGGAA	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr2_-_208634287_208634439	0.126464	AACGGAA	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr7_-_92463210_92463231	0.108782	AACGGAA	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr10_+_114709999_114710031	0.105887	AACGGAA	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr12_-_117319236_117319252	0.104797	AACGGAA	ENST00000257572.5|HRK|ENSG00000135116.5|harakiri, BCL2 interacting protein (contains only BH3 domain)
hg19_v2_chr1_-_17766198_17766232	0.102033	AACGGAA	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr22_+_51112800_51112852	0.0993662	AACGGAA	ENST00000414786.2|SHANK3|ENSG00000251322.3|SH3 and multiple ankyrin repeat domains 3
hg19_v2_chr8_-_141645645_141645783	0.0950301	AACGGAA	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chrX_-_109561294_109561467	0.0950251	AACGGAA	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr7_-_71801980_71802013	0.0856072	AACGGAA	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr19_-_15560730_15560772	0.0755936	AACGGAA	ENST00000389282.4|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs 	ENST00000263381.7|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chrX_-_41782249_41782287	0.0671009	AACGGAA	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr6_+_116601265_116601288	0.0503838	AACGGAA	ENST00000452085.3|DSE|ENSG00000111817.12|dermatan sulfate epimerase
hg19_v2_chr2_-_128643496_128643496	0.0392258	AACGGAA	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chr6_+_21593972_21594071	0.0352263	AACGGAA	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr11_-_67980744_67980882	0.0344793	AACGGAA	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr16_-_71843047_71843104	0.026044	AACGGAA	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr19_+_3359561_3359681	0.0213767	AACGGAA	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr7_-_17980091_17980136	0.0198322	AACGGAA	ENST00000409389.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000409604.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000428135.3|SNX13|ENSG00000071189.17|sorting nexin 13
hg19_v2_chr3_-_52090461_52090566	0.0186737	AACGGAA	ENST00000296483.6|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7 	ENST00000495880.1|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7
hg19_v2_chr3_-_18466787_18466861	0.0170468	AACGGAA	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr1_+_33722080_33722174	0.0150459	AACGGAA	ENST00000483388.1|ZNF362|ENSG00000160094.10|zinc finger protein 362 	ENST00000539719.1|ZNF362|ENSG00000160094.10|zinc finger protein 362
hg19_v2_chr17_-_7232585_7232712	0.00763213	AACGGAA	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr1_+_61547894_61547980	0.00725832	AACGGAA	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr16_-_4897266_4897343	0.00390568	AACGGAA	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
