hg19_v2_chr2_-_151344172_151344243	1.84966	AAUACUG	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr1_+_77333117_77333139	1.80889	AAUACUG	ENST00000477717.1|ST6GALNAC5|ENSG00000117069.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
hg19_v2_chr16_+_86544113_86544145	1.6812	AAUACUG	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chr4_+_20255123_20255213	1.59407	AAUACUG	ENST00000504154.1|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila) 	ENST00000273739.5|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila)
hg19_v2_chr11_-_46940074_46940193	1.56523	AAUACUG	ENST00000378623.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4 	ENST00000534404.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4
hg19_v2_chr13_-_107187462_107187462	1.50818	AAUACUG	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr10_+_102106829_102106881	1.50079	AAUACUG	ENST00000370355.2|SCD|ENSG00000099194.5|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v2_chrX_-_6146876_6146924	1.49054	AAUACUG	ENST00000381095.3|NLGN4X|ENSG00000146938.10|neuroligin 4, X-linked
hg19_v2_chr1_+_201252580_201252640	1.46531	AAUACUG	ENST00000367324.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) 	ENST00000263946.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
hg19_v2_chr19_+_15218180_15218249	1.42208	AAUACUG	ENST00000342784.2|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000597977.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000600440.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
hg19_v2_chr4_-_6383594_6383600	1.37951	AAUACUG	ENST00000335585.5|PPP2R2C|ENSG00000074211.9|protein phosphatase 2, regulatory subunit B, gamma
hg19_v2_chr3_+_181429704_181429722	1.36359	AAUACUG	ENST00000431565.2|SOX2|ENSG00000181449.2|SRY (sex determining region Y)-box 2 	ENST00000325404.1|SOX2|ENSG00000181449.2|SRY (sex determining region Y)-box 2
hg19_v2_chr10_-_30348439_30348531	1.33174	AAUACUG	ENST00000375377.1|KIAA1462|ENSG00000165757.8|KIAA1462
hg19_v2_chr4_-_55991752_55991770	1.27425	AAUACUG	ENST00000263923.4|KDR|ENSG00000128052.8|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v2_chr11_+_118477144_118477156	1.26828	AAUACUG	ENST00000361417.2|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr9_+_112403088_112403142	1.24858	AAUACUG	ENST00000448454.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr3_+_11034403_11034492	1.22979	AAUACUG	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr16_-_70719925_70719989	1.20748	AAUACUG	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr1_+_155099927_155099964	1.19234	AAUACUG	ENST00000368407.3|EFNA1|ENSG00000169242.7|ephrin-A1
hg19_v2_chr8_+_106330920_106330979	1.17836	AAUACUG	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr19_-_46476791_46476819	1.17552	AAUACUG	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr1_+_199996702_199996732	1.16515	AAUACUG	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr4_-_176923483_176923514	1.16308	AAUACUG	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr3_+_50192537_50192563	1.12977	AAUACUG	ENST00000002829.3|SEMA3F|ENSG00000001617.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
hg19_v2_chr20_-_48099182_48099214	1.11458	AAUACUG	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr7_-_103629963_103630056	1.09566	AAUACUG	ENST00000428762.1|RELN|ENSG00000189056.9|reelin 	ENST00000343529.5|RELN|ENSG00000189056.9|reelin 	ENST00000424685.2|RELN|ENSG00000189056.9|reelin
hg19_v2_chr11_+_12695944_12695989	1.0713	AAUACUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr19_-_11308190_11308244	1.07095	AAUACUG	ENST00000586659.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000592903.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000589359.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000588724.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000432929.2|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2
hg19_v2_chrX_+_73641286_73641400	1.06153	AAUACUG	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
hg19_v2_chr5_-_11904152_11904166	1.05988	AAUACUG	ENST00000304623.8|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000458100.2|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr16_-_65155833_65155976	1.03843	AAUACUG	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr3_-_123603137_123603203	1.03604	AAUACUG	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr8_+_11561660_11561751	1.01506	AAUACUG	ENST00000526716.1|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000335135.4|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000528027.1|GATA4|ENSG00000136574.13|GATA binding protein 4
hg19_v2_chr9_-_14314066_14314075	0.99991	AAUACUG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr13_+_98794810_98794826	0.993911	AAUACUG	ENST00000595437.1|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr5_-_112630598_112630689	0.991909	AAUACUG	ENST00000302475.4|MCC|ENSG00000171444.13|mutated in colorectal cancers
hg19_v2_chr9_-_34589700_34589709	0.991757	AAUACUG	ENST00000351266.4|CNTFR|ENSG00000122756.10|ciliary neurotrophic factor receptor
hg19_v2_chr1_-_57045228_57045242	0.985887	AAUACUG	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr13_+_93879085_93879136	0.9736	AAUACUG	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr22_+_48972118_48972153	0.960402	AAUACUG	ENST00000358295.5|FAM19A5|ENSG00000219438.4|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
hg19_v2_chr17_+_53342311_53342400	0.9534	AAUACUG	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr3_-_134093395_134093436	0.952222	AAUACUG	ENST00000249883.5|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr1_+_66999799_66999965	0.950524	AAUACUG	ENST00000371035.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371036.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371037.4|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1
hg19_v2_chr20_+_10199468_10199516	0.943503	AAUACUG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chrX_-_110038990_110038997	0.904503	AAUACUG	ENST00000372045.1|CHRDL1|ENSG00000101938.10|chordin-like 1 	ENST00000394797.4|CHRDL1|ENSG00000101938.10|chordin-like 1
hg19_v2_chr8_-_13372395_13372429	0.898655	AAUACUG	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr5_+_71403061_71403169	0.890576	AAUACUG	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr12_+_2162447_2162464	0.888043	AAUACUG	ENST00000335762.5|CACNA1C|ENSG00000151067.16|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENST00000399655.1|CACNA1C|ENSG00000151067.16|calcium channel, voltage-dependent, L type, alpha 1C subunit
hg19_v2_chr22_-_36236265_36236481	0.885438	AAUACUG	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr8_+_22224811_22224822	0.879528	AAUACUG	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr5_+_38846101_38846174	0.867555	AAUACUG	ENST00000274276.3|OSMR|ENSG00000145623.8|oncostatin M receptor
hg19_v2_chr12_+_5541267_5541285	0.866107	AAUACUG	ENST00000423158.3|NTF3|ENSG00000185652.7|neurotrophin 3
hg19_v2_chr6_-_167040731_167040745	0.860067	AAUACUG	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr1_-_95392635_95392834	0.859739	AAUACUG	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr10_-_81205373_81205429	0.845854	AAUACUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr11_+_73019282_73019355	0.83272	AAUACUG	ENST00000263674.3|ARHGEF17|ENSG00000110237.3|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v2_chr11_+_120195992_120196023	0.825492	AAUACUG	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr8_-_89339705_89339721	0.824772	AAUACUG	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr2_+_205410516_205410563	0.816165	AAUACUG	ENST00000406610.2|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta 	ENST00000462231.1|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta
hg19_v2_chr17_-_42908155_42908204	0.797098	AAUACUG	ENST00000426548.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000590758.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000591424.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa
hg19_v2_chr17_+_72983674_72983768	0.767826	AAUACUG	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr1_+_183605200_183605220	0.765396	AAUACUG	ENST00000304685.4|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr13_-_33859819_33859910	0.761659	AAUACUG	ENST00000336934.5|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr7_-_94285511_94285522	0.752949	AAUACUG	ENST00000265735.7|SGCE|ENSG00000127990.11|sarcoglycan, epsilon
hg19_v2_chr15_-_23932437_23932459	0.750051	AAUACUG	ENST00000331837.4|NDN|ENSG00000182636.4|necdin, melanoma antigen (MAGE) family member
hg19_v2_chr1_+_182992545_182992630	0.749869	AAUACUG	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chrX_+_114827818_114827842	0.746508	AAUACUG	ENST00000420625.2|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr7_+_5632436_5632454	0.74594	AAUACUG	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chr3_-_192445289_192445395	0.731665	AAUACUG	ENST00000430714.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000418610.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000448795.1|FGF12|ENSG00000114279.9|fibroblast growth factor 12 	ENST00000445105.2|FGF12|ENSG00000114279.9|fibroblast growth factor 12
hg19_v2_chr3_+_159557637_159557650	0.724368	AAUACUG	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr3_+_158991025_158991083	0.722652	AAUACUG	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr13_-_40177261_40177339	0.719177	AAUACUG	ENST00000379589.3|LHFP|ENSG00000183722.7|lipoma HMGIC fusion partner
hg19_v2_chr10_+_31608054_31608156	0.709771	AAUACUG	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr3_-_120170052_120170100	0.688404	AAUACUG	ENST00000295633.3|FSTL1|ENSG00000163430.5|follistatin-like 1
hg19_v2_chr10_-_105615164_105615323	0.680426	AAUACUG	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr9_+_112810878_112810985	0.679974	AAUACUG	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr8_+_74206829_74206847	0.674824	AAUACUG	ENST00000240285.5|RDH10|ENSG00000121039.5|retinol dehydrogenase 10 (all-trans)
hg19_v2_chr15_+_62853562_62853614	0.669068	AAUACUG	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr9_+_132934835_132934857	0.664546	AAUACUG	ENST00000372398.3|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr1_-_59249732_59249785	0.650791	AAUACUG	ENST00000371222.2|JUN|ENSG00000177606.5|jun proto-oncogene
hg19_v2_chr5_-_95297678_95297775	0.650266	AAUACUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr1_-_41131326_41131400	0.649495	AAUACUG	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr1_-_161059380_161059392	0.642978	AAUACUG	ENST00000368012.3|PVRL4|ENSG00000143217.7|poliovirus receptor-related 4
hg19_v2_chr5_-_45696253_45696427	0.634095	AAUACUG	ENST00000303230.4|HCN1|ENSG00000164588.4|hyperpolarization activated cyclic nucleotide-gated potassium channel 1
hg19_v2_chr1_+_25071848_25071944	0.633059	AAUACUG	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr12_-_15942309_15942330	0.630997	AAUACUG	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr5_-_121413974_121413986	0.620476	AAUACUG	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr12_+_72666407_72666463	0.611548	AAUACUG	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr11_-_35440796_35440916	0.611455	AAUACUG	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr1_-_208417620_208417680	0.601558	AAUACUG	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr8_-_22550815_22550844	0.599459	AAUACUG	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr14_+_52118576_52118673	0.594728	AAUACUG	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr6_+_43737939_43737956	0.594132	AAUACUG	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr1_-_214724566_214724566	0.589329	AAUACUG	ENST00000366956.5|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr14_-_35182994_35183034	0.57086	AAUACUG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr7_-_111846435_111846471	0.566223	AAUACUG	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr21_+_40177143_40177231	0.558216	AAUACUG	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr2_-_216300784_216300895	0.546512	AAUACUG	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr7_+_73703728_73703807	0.545938	AAUACUG	ENST00000361545.5|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2 	ENST00000223398.6|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2
hg19_v2_chr13_-_29069232_29069272	0.542272	AAUACUG	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr9_+_112542572_112542590	0.541687	AAUACUG	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr3_+_77088989_77089037	0.540947	AAUACUG	ENST00000461745.1|ROBO2|ENSG00000185008.13|roundabout, axon guidance receptor, homolog 2 (Drosophila)
hg19_v2_chr9_+_2621798_2621834	0.538149	AAUACUG	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr2_-_166930131_166930149	0.530844	AAUACUG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr13_-_30881621_30881675	0.530515	AAUACUG	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr7_-_132261253_132261323	0.529943	AAUACUG	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr2_-_158485387_158485517	0.523944	AAUACUG	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr2_+_201170703_201170716	0.52185	AAUACUG	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr6_-_122792919_122792970	0.515475	AAUACUG	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chrX_+_53078273_53078273	0.509636	AAUACUG	ENST00000332582.4|GPR173|ENSG00000184194.5|G protein-coupled receptor 173
hg19_v2_chr1_-_220101944_220102000	0.507406	AAUACUG	ENST00000366926.3|SLC30A10|ENSG00000196660.6|solute carrier family 30, member 10 	ENST00000536992.1|SLC30A10|ENSG00000196660.6|solute carrier family 30, member 10
hg19_v2_chr3_-_24536253_24536328	0.500457	AAUACUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr7_-_82073109_82073150	0.499357	AAUACUG	ENST00000356860.3|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr17_-_76870222_76870242	0.496937	AAUACUG	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr8_-_93115445_93115462	0.491563	AAUACUG	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr3_-_167813672_167813763	0.490929	AAUACUG	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr16_+_4364762_4364762	0.4873	AAUACUG	ENST00000262366.3|GLIS2|ENSG00000126603.4|GLIS family zinc finger 2
hg19_v2_chr12_+_8850471_8850534	0.485153	AAUACUG	ENST00000535829.1|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B 	ENST00000357529.3|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B
hg19_v2_chr17_-_78450398_78450413	0.482756	AAUACUG	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr2_+_210444142_210444194	0.482151	AAUACUG	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr13_+_27131887_27131899	0.48106	AAUACUG	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr2_+_206547215_206547232	0.480746	AAUACUG	ENST00000360409.3|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540178.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540841.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000355117.4|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000450507.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000417189.1|NRP2|ENSG00000118257.12|neuropilin 2
hg19_v2_chr11_-_110583451_110583451	0.478667	AAUACUG	ENST00000260283.4|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20 	ENST00000528829.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr9_+_36036430_36036430	0.473901	AAUACUG	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr13_-_107220455_107220517	0.458957	AAUACUG	ENST00000400198.3|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr6_-_57087042_57087128	0.456154	AAUACUG	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr9_-_73029540_73029540	0.452754	AAUACUG	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr7_-_27183263_27183287	0.445835	AAUACUG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr9_+_470288_470336	0.445008	AAUACUG	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr3_-_185826855_185826911	0.442335	AAUACUG	ENST00000306376.5|ETV5|ENSG00000244405.3|ets variant 5
hg19_v2_chr11_-_66115032_66115163	0.437642	AAUACUG	ENST00000311181.4|B3GNT1|ENSG00000174684.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v2_chr4_+_156588350_156588406	0.432531	AAUACUG	ENST00000296518.7|GUCY1A3|ENSG00000164116.12|guanylate cyclase 1, soluble, alpha 3
hg19_v2_chr14_-_105635090_105635161	0.429915	AAUACUG	ENST00000331782.3|JAG2|ENSG00000184916.4|jagged 2 	ENST00000347004.2|JAG2|ENSG00000184916.4|jagged 2
hg19_v2_chr5_-_41510656_41510713	0.428516	AAUACUG	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr10_+_96162242_96162283	0.421961	AAUACUG	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr12_-_8088871_8088932	0.416607	AAUACUG	ENST00000075120.7|SLC2A3|ENSG00000059804.11|solute carrier family 2 (facilitated glucose transporter), member 3
hg19_v2_chr5_+_129240151_129240182	0.412362	AAUACUG	ENST00000305031.4|CHSY3|ENSG00000198108.3|chondroitin sulfate synthase 3
hg19_v2_chr2_-_164592497_164592573	0.40867	AAUACUG	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr14_+_67826709_67826751	0.407658	AAUACUG	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr20_+_58152524_58152566	0.405552	AAUACUG	ENST00000359926.3|PHACTR3|ENSG00000087495.12|phosphatase and actin regulator 3
hg19_v2_chr12_-_47219733_47219785	0.404475	AAUACUG	ENST00000547477.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000447411.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000266579.4|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4
hg19_v2_chr5_-_57756087_57756087	0.404087	AAUACUG	ENST00000274289.3|PLK2|ENSG00000145632.10|polo-like kinase 2
hg19_v2_chr7_+_119913688_119913728	0.400406	AAUACUG	ENST00000331113.4|KCND2|ENSG00000184408.5|potassium voltage-gated channel, Shal-related subfamily, member 2
hg19_v2_chr12_+_1800179_1800250	0.392215	AAUACUG	ENST00000357103.4|ADIPOR2|ENSG00000006831.9|adiponectin receptor 2
hg19_v2_chr7_-_41742697_41742714	0.386477	AAUACUG	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr12_-_8815404_8815438	0.378324	AAUACUG	ENST00000359478.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000396549.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr19_+_34745442_34745502	0.378072	AAUACUG	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr13_-_84456527_84456541	0.37775	AAUACUG	ENST00000377084.2|SLITRK1|ENSG00000178235.6|SLIT and NTRK-like family, member 1
hg19_v2_chr5_-_44388899_44388918	0.375752	AAUACUG	ENST00000264664.4|FGF10|ENSG00000070193.4|fibroblast growth factor 10
hg19_v2_chr6_-_154831779_154831801	0.372247	AAUACUG	ENST00000607772.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr6_+_1389989_1390069	0.36801	AAUACUG	ENST00000259806.1|FOXF2|ENSG00000137273.3|forkhead box F2
hg19_v2_chr2_-_47168906_47168994	0.366424	AAUACUG	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr2_+_39893043_39893118	0.359994	AAUACUG	ENST00000281961.2|TMEM178A|ENSG00000152154.6|transmembrane protein 178A
hg19_v2_chr1_+_200708671_200708744	0.35823	AAUACUG	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr14_-_53417732_53417815	0.356746	AAUACUG	ENST00000399304.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000395631.2|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000341590.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000343279.4|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr1_+_3607228_3607250	0.356452	AAUACUG	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr2_-_73053126_73053184	0.355421	AAUACUG	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr1_-_8086343_8086378	0.353471	AAUACUG	ENST00000474874.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1 	ENST00000469499.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1 	ENST00000377482.5|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1
hg19_v2_chr15_+_59063478_59063561	0.350156	AAUACUG	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr2_-_193059634_193059664	0.348175	AAUACUG	ENST00000392314.1|TMEFF2|ENSG00000144339.7|transmembrane protein with EGF-like and two follistatin-like domains 2
hg19_v2_chr6_-_80247105_80247133	0.345493	AAUACUG	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr12_+_79258547_79258607	0.341676	AAUACUG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr9_+_34990219_34990312	0.338533	AAUACUG	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr2_+_28615669_28615733	0.336666	AAUACUG	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr5_-_171433819_171433911	0.321782	AAUACUG	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr10_-_98273668_98273688	0.319603	AAUACUG	ENST00000357947.3|TLL2|ENSG00000095587.8|tolloid-like 2
hg19_v2_chr1_-_52456352_52456436	0.31876	AAUACUG	ENST00000371655.3|RAB3B|ENSG00000169213.6|RAB3B, member RAS oncogene family
hg19_v2_chr11_-_123525289_123525341	0.317322	AAUACUG	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chr10_-_52645416_52645444	0.31411	AAUACUG	ENST00000374001.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373997.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373995.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000282641.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000395495.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000414883.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor
hg19_v2_chr1_+_64936428_64936475	0.311732	AAUACUG	ENST00000371073.2|CACHD1|ENSG00000158966.9|cache domain containing 1 	ENST00000290039.5|CACHD1|ENSG00000158966.9|cache domain containing 1
hg19_v2_chr7_-_35077653_35077653	0.31091	AAUACUG	ENST00000310974.4|DPY19L1|ENSG00000173852.9|dpy-19-like 1 (C. elegans)
hg19_v2_chr18_-_53255766_53255860	0.309646	AAUACUG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr12_-_123011536_123011547	0.306567	AAUACUG	ENST00000331738.7|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000354654.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr3_+_44379944_44380019	0.298327	AAUACUG	ENST00000396078.3|TCAIM|ENSG00000179152.14|T cell activation inhibitor, mitochondrial 	ENST00000342649.4|TCAIM|ENSG00000179152.14|T cell activation inhibitor, mitochondrial
hg19_v2_chr8_+_70378852_70378866	0.294741	AAUACUG	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr18_-_45663666_45663732	0.29463	AAUACUG	ENST00000535628.2|ZBTB7C|ENSG00000184828.5|zinc finger and BTB domain containing 7C
hg19_v2_chr1_+_202317815_202317854	0.294606	AAUACUG	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr7_-_75988321_75988348	0.287659	AAUACUG	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr2_-_86564776_86564813	0.285172	AAUACUG	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr7_+_29234028_29234043	0.280171	AAUACUG	ENST00000222792.6|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr16_-_2185899_2185899	0.278341	AAUACUG	ENST00000262304.4|PKD1|ENSG00000008710.13|polycystic kidney disease 1 (autosomal dominant) 	ENST00000423118.1|PKD1|ENSG00000008710.13|polycystic kidney disease 1 (autosomal dominant)
hg19_v2_chr15_-_49447835_49447858	0.27771	AAUACUG	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr5_+_149887672_149887698	0.277063	AAUACUG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr10_+_133918175_133918175	0.27673	AAUACUG	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr11_-_119599794_119599857	0.275765	AAUACUG	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chr20_-_23402028_23402157	0.275524	AAUACUG	ENST00000398425.3|NAPB|ENSG00000125814.13|N-ethylmaleimide-sensitive factor attachment protein, beta 	ENST00000432543.2|NAPB|ENSG00000125814.13|N-ethylmaleimide-sensitive factor attachment protein, beta 	ENST00000377026.4|NAPB|ENSG00000125814.13|N-ethylmaleimide-sensitive factor attachment protein, beta
hg19_v2_chr7_-_42276612_42276782	0.274492	AAUACUG	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr6_+_30687978_30688141	0.273101	AAUACUG	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr13_-_103451307_103451380	0.270463	AAUACUG	ENST00000376004.4|KDELC1|ENSG00000134901.8|KDEL (Lys-Asp-Glu-Leu) containing 1
hg19_v2_chr10_-_102279586_102279711	0.269547	AAUACUG	ENST00000370345.3|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000451524.1|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000370329.5|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae)
hg19_v2_chr4_+_141294628_141294821	0.265456	AAUACUG	ENST00000512749.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000608372.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000506597.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000394201.4|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000510586.1|SCOC|ENSG00000153130.13|short coiled-coil protein
hg19_v2_chr17_-_53499310_53499353	0.265311	AAUACUG	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr8_-_48651648_48651648	0.2532	AAUACUG	ENST00000408965.3|CEBPD|ENSG00000221869.4|CCAAT/enhancer binding protein (C/EBP), delta
hg19_v2_chr12_-_31744031_31744059	0.249501	AAUACUG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr6_+_17600576_17600642	0.248796	AAUACUG	ENST00000259963.3|FAM8A1|ENSG00000137414.5|family with sequence similarity 8, member A1
hg19_v2_chr11_+_111807863_111807937	0.248511	AAUACUG	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr3_-_98620500_98620547	0.24691	AAUACUG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr14_-_27066636_27066701	0.245889	AAUACUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr16_+_9185450_9185516	0.243912	AAUACUG	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr8_-_74884511_74884546	0.243366	AAUACUG	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr6_+_126112001_126112062	0.242108	AAUACUG	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr5_+_102201430_102201478	0.237738	AAUACUG	ENST00000438793.3|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000346918.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr10_+_120967072_120967101	0.236384	AAUACUG	ENST00000392870.2|GRK5|ENSG00000198873.10|G protein-coupled receptor kinase 5
hg19_v2_chr2_-_36825281_36825342	0.231181	AAUACUG	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr7_+_6414128_6414185	0.230286	AAUACUG	ENST00000348035.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 	ENST00000356142.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
hg19_v2_chr12_-_8025442_8025459	0.229578	AAUACUG	ENST00000340749.5|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000535295.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000539234.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v2_chr10_+_63661053_63661079	0.228001	AAUACUG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr16_+_77822427_77822469	0.224183	AAUACUG	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr12_+_56360550_56360566	0.221148	AAUACUG	ENST00000266970.4|CDK2|ENSG00000123374.6|cyclin-dependent kinase 2
hg19_v2_chr7_-_11871815_11871831	0.220208	AAUACUG	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr12_+_57522258_57522313	0.216508	AAUACUG	ENST00000553277.1|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1 	ENST00000243077.3|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1
hg19_v2_chr13_+_42622781_42622889	0.214	AAUACUG	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr10_+_52751010_52751118	0.213703	AAUACUG	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr5_-_14871866_14871916	0.213664	AAUACUG	ENST00000284268.6|ANKH|ENSG00000154122.8|ANKH inorganic pyrophosphate transport regulator
hg19_v2_chr1_-_72748417_72748510	0.213084	AAUACUG	ENST00000357731.5|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr4_+_113066552_113066563	0.211222	AAUACUG	ENST00000309733.5|C4orf32|ENSG00000174749.5|chromosome 4 open reading frame 32
hg19_v2_chr5_+_17217669_17217718	0.210716	AAUACUG	ENST00000322611.3|BASP1|ENSG00000176788.7|brain abundant, membrane attached signal protein 1
hg19_v2_chr1_+_61547894_61547980	0.209728	AAUACUG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr4_+_154125565_154125626	0.20931	AAUACUG	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr2_+_102508955_102508955	0.20909	AAUACUG	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr12_+_121124599_121124672	0.207715	AAUACUG	ENST00000228506.3|MLEC|ENSG00000110917.3|malectin
hg19_v2_chr2_+_204192942_204193038	0.206681	AAUACUG	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr13_+_33160553_33160564	0.205917	AAUACUG	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr6_+_52535878_52535969	0.205643	AAUACUG	ENST00000211314.4|TMEM14A|ENSG00000096092.5|transmembrane protein 14A
hg19_v2_chrX_-_33146477_33146521	0.204511	AAUACUG	ENST00000378677.2|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr10_+_25463951_25463991	0.201954	AAUACUG	ENST00000376351.3|GPR158|ENSG00000151025.9|G protein-coupled receptor 158
hg19_v2_chr2_-_62733476_62733476	0.201931	AAUACUG	ENST00000335390.5|TMEM17|ENSG00000186889.5|transmembrane protein 17
hg19_v2_chr18_+_55018044_55018044	0.201546	AAUACUG	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr11_+_109292846_109292875	0.201396	AAUACUG	ENST00000327419.6|C11orf87|ENSG00000185742.6|chromosome 11 open reading frame 87
hg19_v2_chr9_-_93405352_93405386	0.199271	AAUACUG	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chrX_-_107975917_107975917	0.195323	AAUACUG	ENST00000563887.1|RP6-24A23.6|ENSG00000260548.1|Uncharacterized protein
hg19_v2_chr1_+_41249539_41249766	0.195304	AAUACUG	ENST00000347132.5|KCNQ4|ENSG00000117013.10|potassium voltage-gated channel, KQT-like subfamily, member 4 	ENST00000509682.2|KCNQ4|ENSG00000117013.10|potassium voltage-gated channel, KQT-like subfamily, member 4
hg19_v2_chr6_+_64281906_64281922	0.193546	AAUACUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr15_+_44580899_44580947	0.192162	AAUACUG	ENST00000559222.1|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4 	ENST00000299957.6|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4
hg19_v2_chr14_-_34931458_34931562	0.191301	AAUACUG	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chr7_-_6312206_6312308	0.190307	AAUACUG	ENST00000350796.3|CYTH3|ENSG00000008256.11|cytohesin 3
hg19_v2_chr1_-_173886491_173886516	0.188431	AAUACUG	ENST00000367698.3|SERPINC1|ENSG00000117601.9|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg19_v2_chr18_-_21166841_21166864	0.185979	AAUACUG	ENST00000269228.5|NPC1|ENSG00000141458.8|Niemann-Pick disease, type C1
hg19_v2_chr14_+_59104741_59104897	0.183778	AAUACUG	ENST00000395153.3|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1 	ENST00000335867.4|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1
hg19_v2_chr9_+_132815985_132816018	0.183441	AAUACUG	ENST00000372410.3|GPR107|ENSG00000148358.15|G protein-coupled receptor 107
hg19_v2_chr9_+_131644388_131644393	0.182376	AAUACUG	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr7_+_128379346_128379447	0.181687	AAUACUG	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chrX_+_9754461_9754496	0.180073	AAUACUG	ENST00000380913.3|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr21_-_39870339_39870443	0.174328	AAUACUG	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr12_+_45609893_45609909	0.173967	AAUACUG	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr17_+_66508537_66508650	0.173474	AAUACUG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr8_-_103668114_103668134	0.169063	AAUACUG	ENST00000285407.6|KLF10|ENSG00000155090.10|Kruppel-like factor 10
hg19_v2_chr1_+_229406847_229406935	0.166907	AAUACUG	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr10_-_104262426_104262437	0.166343	AAUACUG	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr1_-_28969517_28969605	0.165652	AAUACUG	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr14_-_25519095_25519280	0.163566	AAUACUG	ENST00000419632.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000358326.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000396700.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000548724.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr12_-_46766577_46766650	0.163423	AAUACUG	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr15_-_44486632_44486664	0.162904	AAUACUG	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr9_-_136242909_136242953	0.158377	AAUACUG	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr16_-_23160591_23160787	0.158155	AAUACUG	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr17_+_57970469_57970600	0.154801	AAUACUG	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr8_-_97173020_97173041	0.154372	AAUACUG	ENST00000287020.5|GDF6|ENSG00000156466.8|growth differentiation factor 6
hg19_v2_chr8_-_49833978_49833996	0.15245	AAUACUG	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr12_-_7079805_7079988	0.152427	AAUACUG	ENST00000536316.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000542912.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000440277.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000545167.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000546111.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000399433.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000535923.1|PHB2|ENSG00000215021.4|prohibitin 2
hg19_v2_chr3_+_128444965_128444985	0.148743	AAUACUG	ENST00000265062.3|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr5_+_77656339_77656362	0.14805	AAUACUG	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr15_+_72766651_72766680	0.146001	AAUACUG	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr11_+_33278811_33279133	0.142165	AAUACUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr12_-_28124903_28124957	0.141179	AAUACUG	ENST00000395872.1|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000354417.3|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000201015.4|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone
hg19_v2_chr12_-_109125285_109125372	0.140024	AAUACUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr11_-_9286921_9286937	0.138893	AAUACUG	ENST00000328194.3|DENND5A|ENSG00000184014.3|DENN/MADD domain containing 5A
hg19_v2_chrX_+_150151752_150151762	0.138711	AAUACUG	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr12_+_120105558_120105694	0.138208	AAUACUG	ENST00000229328.5|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit 	ENST00000541640.1|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg19_v2_chr14_-_68141535_68141574	0.137069	AAUACUG	ENST00000554659.1|VTI1B|ENSG00000100568.6|vesicle transport through interaction with t-SNAREs 1B
hg19_v2_chr2_-_39664405_39664453	0.135882	AAUACUG	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr11_-_68609377_68609399	0.134854	AAUACUG	ENST00000265641.5|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver) 	ENST00000376618.2|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver)
hg19_v2_chr3_+_101292939_101293063	0.134622	AAUACUG	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr8_+_104831472_104831510	0.134435	AAUACUG	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr4_-_83295103_83295157	0.134153	AAUACUG	ENST00000313899.7|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000352301.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000509107.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000353341.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000541060.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v2_chr12_-_51611477_51611612	0.131899	AAUACUG	ENST00000389243.4|POU6F1|ENSG00000184271.11|POU class 6 homeobox 1
hg19_v2_chr3_-_33686743_33686807	0.131183	AAUACUG	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr20_-_48729670_48729694	0.130632	AAUACUG	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr14_+_45431379_45431465	0.129521	AAUACUG	ENST00000361577.3|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000361462.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000382233.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B
hg19_v2_chr2_-_19558373_19558414	0.126806	AAUACUG	ENST00000272223.2|OSR1|ENSG00000143867.5|odd-skipped related transciption factor 1
hg19_v2_chr12_+_12870055_12870119	0.124226	AAUACUG	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr8_-_122653630_122653661	0.124133	AAUACUG	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr5_+_170846640_170846660	0.123763	AAUACUG	ENST00000274625.5|FGF18|ENSG00000156427.7|fibroblast growth factor 18
hg19_v2_chr12_-_29534074_29534127	0.123163	AAUACUG	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr15_+_57884117_57884160	0.121977	AAUACUG	ENST00000267853.5|MYZAP|ENSG00000263155.1|myocardial zonula adherens protein
hg19_v2_chr13_-_41706864_41706963	0.121338	AAUACUG	ENST00000379485.1|KBTBD6|ENSG00000165572.6|kelch repeat and BTB (POZ) domain containing 6 	ENST00000499385.2|KBTBD6|ENSG00000165572.6|kelch repeat and BTB (POZ) domain containing 6
hg19_v2_chr12_+_27677085_27677189	0.121022	AAUACUG	ENST00000545334.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000540114.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000537927.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000318304.8|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000535047.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000542629.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000228425.6|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
hg19_v2_chr9_-_34458531_34458582	0.118971	AAUACUG	ENST00000379089.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379087.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379084.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379081.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379080.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000422409.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379078.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000445726.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000297620.4|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A
hg19_v2_chr4_-_73434498_73434516	0.118926	AAUACUG	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr10_+_74033672_74033688	0.117524	AAUACUG	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chrX_-_23926004_23926072	0.115627	AAUACUG	ENST00000379226.4|APOO|ENSG00000184831.9|apolipoprotein O 	ENST00000379220.3|APOO|ENSG00000184831.9|apolipoprotein O
hg19_v2_chr4_-_121993673_121993698	0.11372	AAUACUG	ENST00000379692.4|NDNF|ENSG00000173376.9|neuron-derived neurotrophic factor
hg19_v2_chrX_+_11129388_11129485	0.11325	AAUACUG	ENST00000321143.4|HCCS|ENSG00000004961.10|holocytochrome c synthase 	ENST00000380763.3|HCCS|ENSG00000004961.10|holocytochrome c synthase 	ENST00000380762.4|HCCS|ENSG00000004961.10|holocytochrome c synthase
hg19_v2_chr7_+_36429409_36429420	0.111348	AAUACUG	ENST00000265748.2|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr2_+_99953816_99953894	0.111326	AAUACUG	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr3_-_156272872_156272923	0.111234	AAUACUG	ENST00000476217.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr3_+_33155444_33155492	0.109367	AAUACUG	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr18_+_32073253_32073339	0.106186	AAUACUG	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr17_-_36956155_36956223	0.105313	AAUACUG	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chr12_+_112856690_112856731	0.105138	AAUACUG	ENST00000392597.1|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11 	ENST00000351677.2|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11
hg19_v2_chr17_-_74733404_74733456	0.104928	AAUACUG	ENST00000508921.3|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000583836.1|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000358156.6|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000392485.2|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000359995.5|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2
hg19_v2_chr12_+_72148614_72148699	0.104888	AAUACUG	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr22_-_42017021_42017100	0.104717	AAUACUG	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr16_-_4166186_4166186	0.104295	AAUACUG	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr16_-_20911641_20911720	0.103871	AAUACUG	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr1_+_32930647_32930684	0.103684	AAUACUG	ENST00000609129.1|ZBTB8B|ENSG00000273274.1|zinc finger and BTB domain containing 8B
hg19_v2_chr11_-_64901978_64902009	0.103073	AAUACUG	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr9_-_37465396_37465454	0.101384	AAUACUG	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr20_+_52824367_52824409	0.100825	AAUACUG	ENST00000371419.2|PFDN4|ENSG00000101132.5|prefoldin subunit 4
hg19_v2_chr17_-_13505219_13505299	0.100363	AAUACUG	ENST00000284110.1|HS3ST3A1|ENSG00000153976.2|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg19_v2_chr4_+_72204755_72204778	0.0999218	AAUACUG	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr7_-_73133959_73134022	0.0989266	AAUACUG	ENST00000395155.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000395154.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000222812.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000395156.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain)
hg19_v2_chr6_+_43139037_43139094	0.0988859	AAUACUG	ENST00000265354.4|SRF|ENSG00000112658.6|serum response factor (c-fos serum response element-binding transcription factor)
hg19_v2_chr2_-_9770706_9770753	0.0981392	AAUACUG	ENST00000381844.4|YWHAQ|ENSG00000134308.9|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
hg19_v2_chr2_-_197457335_197457421	0.0974939	AAUACUG	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr9_+_37753795_37753820	0.0970594	AAUACUG	ENST00000377753.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000537911.1|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000377754.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000297994.3|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae)
hg19_v2_chr9_+_128509624_128509658	0.0966965	AAUACUG	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr1_-_10532531_10532594	0.0964069	AAUACUG	ENST00000377036.2|DFFA|ENSG00000160049.7|DNA fragmentation factor, 45kDa, alpha polypeptide 	ENST00000377038.3|DFFA|ENSG00000160049.7|DNA fragmentation factor, 45kDa, alpha polypeptide
hg19_v2_chr6_-_31869769_31869880	0.0958069	AAUACUG	ENST00000375527.2|ZBTB12|ENSG00000204366.3|zinc finger and BTB domain containing 12
hg19_v2_chr6_+_41040678_41040722	0.095774	AAUACUG	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr5_+_31193847_31193887	0.0949765	AAUACUG	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr13_-_21635631_21635744	0.0947764	AAUACUG	ENST00000382592.4|LATS2|ENSG00000150457.7|large tumor suppressor kinase 2
hg19_v2_chr1_-_204329013_204329086	0.094538	AAUACUG	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr9_+_33265011_33265059	0.0929754	AAUACUG	ENST00000419016.2|CHMP5|ENSG00000086065.9|charged multivesicular body protein 5
hg19_v2_chr13_+_53226963_53227023	0.0925061	AAUACUG	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr19_+_9945962_9946023	0.0919056	AAUACUG	ENST00000587625.1|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1 	ENST00000247970.4|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1 	ENST00000588695.1|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1
hg19_v2_chr17_-_56084578_56084707	0.0903024	AAUACUG	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr2_-_203776864_203776949	0.0892016	AAUACUG	ENST00000261015.4|WDR12|ENSG00000138442.5|WD repeat domain 12
hg19_v2_chr6_+_135502466_135502489	0.0885791	AAUACUG	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr2_+_148778570_148778589	0.087975	AAUACUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr5_+_7396141_7396324	0.0875687	AAUACUG	ENST00000338316.4|ADCY2|ENSG00000078295.11|adenylate cyclase 2 (brain)
hg19_v2_chr17_-_7518145_7518234	0.0869183	AAUACUG	ENST00000250113.7|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2 	ENST00000571597.1|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2
hg19_v2_chr2_+_210867341_210867386	0.0867749	AAUACUG	ENST00000408981.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000454822.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000429921.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000453724.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000540255.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000438265.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000429907.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000441588.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000445268.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000452025.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000438204.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000411934.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000435437.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000354506.6|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase
hg19_v2_chr2_+_236402669_236402788	0.086628	AAUACUG	ENST00000409457.1|AGAP1|ENSG00000157985.13|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENST00000336665.5|AGAP1|ENSG00000157985.13|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENST00000304032.8|AGAP1|ENSG00000157985.13|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
hg19_v2_chr12_+_51985001_51985037	0.0858264	AAUACUG	ENST00000354534.6|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chr4_-_68566832_68566897	0.0845454	AAUACUG	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr10_+_120789223_120789231	0.0843142	AAUACUG	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr1_-_240775447_240775462	0.0842819	AAUACUG	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr5_-_137878887_137878989	0.0836558	AAUACUG	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chr2_+_166326157_166326216	0.0822685	AAUACUG	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr10_-_27703269_27703297	0.0817433	AAUACUG	ENST00000438700.3|PTCHD3|ENSG00000182077.6|patched domain containing 3
hg19_v2_chr20_+_43991668_43991853	0.0817274	AAUACUG	ENST00000243918.5|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000426004.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr11_-_47788847_47788919	0.0815831	AAUACUG	ENST00000263773.5|FNBP4|ENSG00000109920.8|formin binding protein 4
hg19_v2_chr17_-_79885576_79885624	0.0809137	AAUACUG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr16_+_69221028_69221092	0.0803661	AAUACUG	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr1_-_1677358_1677512	0.0801706	AAUACUG	ENST00000355439.2|SLC35E2|ENSG00000215790.2|solute carrier family 35, member E2 	ENST00000400924.1|SLC35E2|ENSG00000215790.2|solute carrier family 35, member E2 	ENST00000246421.4|SLC35E2|ENSG00000215790.2|solute carrier family 35, member E2
hg19_v2_chr10_+_27793197_27793247	0.0800399	AAUACUG	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr10_+_12171721_12171732	0.0769979	AAUACUG	ENST00000379020.4|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae) 	ENST00000379017.3|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae)
hg19_v2_chr11_+_111473108_111473226	0.0762685	AAUACUG	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr16_+_81348528_81348578	0.075591	AAUACUG	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr18_-_44676819_44676891	0.0755509	AAUACUG	ENST00000590815.1|HDHD2|ENSG00000167220.7|haloacid dehalogenase-like hydrolase domain containing 2 	ENST00000587388.1|HDHD2|ENSG00000167220.7|haloacid dehalogenase-like hydrolase domain containing 2 	ENST00000590481.1|HDHD2|ENSG00000167220.7|haloacid dehalogenase-like hydrolase domain containing 2 	ENST00000591480.1|HDHD2|ENSG00000167220.7|haloacid dehalogenase-like hydrolase domain containing 2 	ENST00000592591.1|HDHD2|ENSG00000167220.7|haloacid dehalogenase-like hydrolase domain containing 2 	ENST00000300605.6|HDHD2|ENSG00000167220.7|haloacid dehalogenase-like hydrolase domain containing 2
hg19_v2_chr6_-_52926539_52926668	0.074807	AAUACUG	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr5_-_179050660_179050722	0.0746692	AAUACUG	ENST00000519056.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000506721.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000503105.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000504348.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000508103.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000510431.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000515158.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000393432.4|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000442819.2|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr11_+_109964087_109964123	0.0741315	AAUACUG	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr2_+_11886710_11886776	0.0741043	AAUACUG	ENST00000256720.2|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000441684.1|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000423495.1|LPIN1|ENSG00000134324.7|lipin 1
hg19_v2_chr6_+_170102210_170102275	0.0733228	AAUACUG	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr8_-_114389353_114389387	0.0733221	AAUACUG	ENST00000343508.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr13_+_96329381_96329416	0.073292	AAUACUG	ENST00000602402.1|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3 	ENST00000376795.6|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3
hg19_v2_chr15_-_64673630_64673648	0.0722505	AAUACUG	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr1_+_32479430_32479597	0.0719992	AAUACUG	ENST00000327300.7|KHDRBS1|ENSG00000121774.13|KH domain containing, RNA binding, signal transduction associated 1 	ENST00000492989.1|KHDRBS1|ENSG00000121774.13|KH domain containing, RNA binding, signal transduction associated 1
hg19_v2_chrX_+_46771711_46771745	0.071438	AAUACUG	ENST00000424392.1|PHF16|ENSG00000102221.9|jade family PHD finger 3 	ENST00000397189.1|PHF16|ENSG00000102221.9|jade family PHD finger 3
hg19_v2_chr3_+_38495333_38495422	0.0696132	AAUACUG	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr9_+_133454943_133455020	0.0695791	AAUACUG	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr2_-_227664474_227664508	0.0692196	AAUACUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr1_+_214161272_214161322	0.0688717	AAUACUG	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr8_+_77593448_77593471	0.0686776	AAUACUG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr20_-_48770244_48770335	0.0678362	AAUACUG	ENST00000371650.5|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000371652.4|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000557021.1|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr3_-_66551351_66551356	0.0676514	AAUACUG	ENST00000273261.3|LRIG1|ENSG00000144749.9|leucine-rich repeats and immunoglobulin-like domains 1
hg19_v2_chr9_-_123555655_123555712	0.0658028	AAUACUG	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr16_+_50582222_50582241	0.0652854	AAUACUG	ENST00000268459.3|NKD1|ENSG00000140807.4|naked cuticle homolog 1 (Drosophila)
hg19_v2_chr14_-_70883708_70883819	0.0641333	AAUACUG	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr15_+_52121822_52121833	0.0626948	AAUACUG	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr9_+_35538616_35538650	0.0622337	AAUACUG	ENST00000455600.1|RUSC2|ENSG00000198853.7|RUN and SH3 domain containing 2
hg19_v2_chr19_+_49617581_49617607	0.0621105	AAUACUG	ENST00000391864.3|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr9_+_115983808_115983880	0.0615665	AAUACUG	ENST00000374210.6|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1 	ENST00000374212.4|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1
hg19_v2_chr10_-_104474128_104474209	0.0611615	AAUACUG	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chr14_-_70038032_70038032	0.0606744	AAUACUG	ENST00000543986.1|CCDC177|ENSG00000255994.1|coiled-coil domain containing 177
hg19_v2_chr5_-_40755987_40756077	0.0583451	AAUACUG	ENST00000337702.4|TTC33|ENSG00000113638.8|tetratricopeptide repeat domain 33
hg19_v2_chr1_-_155532484_155532605	0.0578903	AAUACUG	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr2_-_122407097_122407163	0.0576336	AAUACUG	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr2_+_148602058_148602185	0.0574955	AAUACUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr10_-_27443155_27443288	0.0561719	AAUACUG	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr4_-_140477928_140477990	0.0559097	AAUACUG	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr5_-_89825328_89825422	0.0557059	AAUACUG	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr11_+_113930291_113930339	0.0555555	AAUACUG	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr5_-_37839782_37839788	0.0534082	AAUACUG	ENST00000326524.2|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor 	ENST00000515058.1|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor
hg19_v2_chr2_-_11484710_11484812	0.0533265	AAUACUG	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr5_-_138775177_138775220	0.0530413	AAUACUG	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr14_+_67707826_67707994	0.0524306	AAUACUG	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr6_-_137113604_137113666	0.0520461	AAUACUG	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chrX_-_11445856_11445943	0.0511676	AAUACUG	ENST00000380736.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr4_+_41937131_41937211	0.0503049	AAUACUG	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr1_-_175161890_175161929	0.0490257	AAUACUG	ENST00000545251.2|KIAA0040|ENSG00000235750.5|KIAA0040 	ENST00000423313.1|KIAA0040|ENSG00000235750.5|KIAA0040
hg19_v2_chr16_+_22019404_22019604	0.0482738	AAUACUG	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr1_+_246729724_246729794	0.0481307	AAUACUG	ENST00000366513.4|CNST|ENSG00000162852.9|consortin, connexin sorting protein 	ENST00000366512.3|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr9_+_114659046_114659102	0.0465308	AAUACUG	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr19_-_4400415_4400570	0.0459488	AAUACUG	ENST00000598564.1|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1 	ENST00000417295.2|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1 	ENST00000269886.3|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1
hg19_v2_chr2_-_47798044_47798132	0.0457539	AAUACUG	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr2_-_131850951_131851065	0.0453997	AAUACUG	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr18_-_57027194_57027194	0.0451957	AAUACUG	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chr3_+_183853052_183853179	0.0450257	AAUACUG	ENST00000273783.3|EIF2B5|ENSG00000145191.7|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 	ENST00000432569.1|EIF2B5|ENSG00000145191.7|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 	ENST00000444495.1|EIF2B5|ENSG00000145191.7|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
hg19_v2_chr4_+_144257915_144258009	0.0443423	AAUACUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr2_+_113033164_113033219	0.0441377	AAUACUG	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr7_+_108210012_108210012	0.0434923	AAUACUG	ENST00000249356.3|DNAJB9|ENSG00000128590.4|DnaJ (Hsp40) homolog, subfamily B, member 9
hg19_v2_chr6_+_136172820_136172846	0.0434189	AAUACUG	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr1_-_24306798_24306828	0.0433418	AAUACUG	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr4_+_160188889_160188968	0.0432887	AAUACUG	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr1_+_114472222_114472377	0.0431668	AAUACUG	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr6_+_163835669_163835693	0.0421734	AAUACUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr20_-_48770174_48770243	0.0413417	AAUACUG	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr3_-_149688896_149688970	0.0407656	AAUACUG	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr1_+_51701924_51702001	0.0401659	AAUACUG	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr10_+_76871454_76871467	0.0388913	AAUACUG	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr14_-_64010046_64010107	0.0386641	AAUACUG	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr18_-_33647487_33647547	0.0385885	AAUACUG	ENST00000590898.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000357384.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000319040.6|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000588737.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000399022.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A
hg19_v2_chr1_+_24882560_24882620	0.0383752	AAUACUG	ENST00000374392.2|NCMAP|ENSG00000184454.6|noncompact myelin associated protein
hg19_v2_chr3_+_48956249_48956330	0.0382427	AAUACUG	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr15_+_41709302_41709348	0.0378138	AAUACUG	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr8_+_28747884_28747938	0.0376099	AAUACUG	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr2_+_231577532_231577639	0.0375996	AAUACUG	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr13_-_36920420_36920574	0.0370492	AAUACUG	ENST00000438666.2|SPG20|ENSG00000133104.8|spastic paraplegia 20 (Troyer syndrome)
hg19_v2_chr11_-_62314268_62314307	0.0360073	AAUACUG	ENST00000257247.7|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000531324.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000378024.4|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr20_-_4982132_4982164	0.0355548	AAUACUG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chrX_-_73834449_73834481	0.0354379	AAUACUG	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr18_+_55711575_55711628	0.0347802	AAUACUG	ENST00000356462.6|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000400345.3|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000589054.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000256832.7|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr5_-_133968529_133968678	0.0346196	AAUACUG	ENST00000402673.2|SAR1B|ENSG00000152700.9|SAR1 homolog B (S. cerevisiae)
hg19_v2_chr5_+_133984462_133984514	0.0341862	AAUACUG	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr17_+_41052808_41052826	0.0341112	AAUACUG	ENST00000592383.1|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit 	ENST00000253801.2|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit 	ENST00000585489.1|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit
hg19_v2_chr2_+_198365122_198365137	0.0336534	AAUACUG	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr1_-_160001737_160001790	0.0323497	AAUACUG	ENST00000368090.2|PIGM|ENSG00000143315.5|phosphatidylinositol glycan anchor biosynthesis, class M
hg19_v2_chr2_+_45168875_45168916	0.0320525	AAUACUG	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chr10_+_112404132_112404155	0.0318959	AAUACUG	ENST00000369519.3|RBM20|ENSG00000203867.7|RNA binding motif protein 20
hg19_v2_chr15_+_76196200_76196227	0.031709	AAUACUG	ENST00000308275.3|FBXO22|ENSG00000167196.9|F-box protein 22 	ENST00000453211.2|FBXO22|ENSG00000167196.9|F-box protein 22
hg19_v2_chr10_+_60094735_60094749	0.0316173	AAUACUG	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr15_+_83478370_83478426	0.0313199	AAUACUG	ENST00000286760.4|WHAMM|ENSG00000156232.6|WAS protein homolog associated with actin, golgi membranes and microtubules
hg19_v2_chr2_-_208890218_208890289	0.0308796	AAUACUG	ENST00000457206.1|PLEKHM3|ENSG00000178385.9|pleckstrin homology domain containing, family M, member 3 	ENST00000427836.2|PLEKHM3|ENSG00000178385.9|pleckstrin homology domain containing, family M, member 3 	ENST00000389247.4|PLEKHM3|ENSG00000178385.9|pleckstrin homology domain containing, family M, member 3
hg19_v2_chr1_-_154943212_154943230	0.030864	AAUACUG	ENST00000368445.5|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000448116.2|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000368449.4|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1
hg19_v2_chr18_+_43304092_43304121	0.0307921	AAUACUG	ENST00000321925.4|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 	ENST00000587601.1|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v2_chr14_-_61116168_61116180	0.029768	AAUACUG	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr12_+_56862301_56862327	0.0296265	AAUACUG	ENST00000338146.5|SPRYD4|ENSG00000176422.10|SPRY domain containing 4
hg19_v2_chr12_+_113659234_113659300	0.0286844	AAUACUG	ENST00000551096.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000551099.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000335509.6|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000552897.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000550785.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000549279.1|TPCN1|ENSG00000186815.8|two pore segment channel 1
hg19_v2_chr14_-_31495569_31495636	0.0281974	AAUACUG	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr1_-_86861936_86862023	0.0273859	AAUACUG	ENST00000394733.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000359242.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000294678.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000479890.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000317336.7|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370567.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000394731.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000478286.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370566.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr12_+_110719032_110719113	0.0268924	AAUACUG	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr8_+_90769967_90769997	0.026683	AAUACUG	ENST00000220751.4|RIPK2|ENSG00000104312.6|receptor-interacting serine-threonine kinase 2
hg19_v2_chr11_+_9685604_9685706	0.0265203	AAUACUG	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr4_-_99851766_99851788	0.0264576	AAUACUG	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr1_-_150602035_150602095	0.0255215	AAUACUG	ENST00000503241.1|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369016.4|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000339643.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000271690.8|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000356527.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000362052.7|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000503345.1|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369014.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369009.3|ENSA|ENSG00000143420.13|endosulfine alpha
hg19_v2_chr2_-_69870835_69870853	0.0245177	AAUACUG	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr15_+_38544476_38544574	0.0240812	AAUACUG	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr1_+_52521928_52521948	0.0237639	AAUACUG	ENST00000489308.2|BTF3L4|ENSG00000134717.13|basic transcription factor 3-like 4
hg19_v2_chr16_-_2246436_2246526	0.0231181	AAUACUG	ENST00000343516.6|CASKIN1|ENSG00000167971.14|CASK interacting protein 1
hg19_v2_chr8_-_57906362_57906452	0.0223526	AAUACUG	ENST00000262644.4|IMPAD1|ENSG00000104331.4|inositol monophosphatase domain containing 1
hg19_v2_chr5_+_70751442_70751456	0.0220294	AAUACUG	ENST00000358731.4|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 	ENST00000380675.2|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
hg19_v2_chr22_-_30956746_30956769	0.0218511	AAUACUG	ENST00000437282.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000447224.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000427899.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000406955.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000452827.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1
hg19_v2_chr9_-_86323118_86323164	0.0217626	AAUACUG	ENST00000376395.4|UBQLN1|ENSG00000135018.9|ubiquilin 1
hg19_v2_chrX_-_19988382_19988416	0.0216992	AAUACUG	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr2_+_169312350_169312372	0.0215214	AAUACUG	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr6_-_110500905_110500921	0.020391	AAUACUG	ENST00000392587.2|WASF1|ENSG00000112290.8|WAS protein family, member 1
hg19_v2_chr11_+_74459876_74459930	0.0201926	AAUACUG	ENST00000299563.4|RNF169|ENSG00000166439.5|ring finger protein 169
hg19_v2_chr9_+_100745615_100745648	0.0188673	AAUACUG	ENST00000339399.4|ANP32B|ENSG00000136938.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
hg19_v2_chrX_+_16804544_16804613	0.0186414	AAUACUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr9_-_139440314_139440314	0.0179278	AAUACUG	ENST00000277541.6|NOTCH1|ENSG00000148400.9|notch 1
hg19_v2_chr16_+_57279004_57279050	0.0175481	AAUACUG	ENST00000219204.3|ARL2BP|ENSG00000102931.3|ADP-ribosylation factor-like 2 binding protein
hg19_v2_chr8_-_28243934_28243993	0.0175161	AAUACUG	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr10_+_111967345_111967442	0.0167943	AAUACUG	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr16_-_67840442_67840555	0.0167225	AAUACUG	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr1_+_33005020_33005077	0.016715	AAUACUG	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr16_-_15736953_15737025	0.0159827	AAUACUG	ENST00000548025.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000551742.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000602337.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000344181.3|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000396368.3|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr15_+_44829255_44829331	0.0153579	AAUACUG	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr17_+_64298944_64298944	0.0151961	AAUACUG	ENST00000413366.3|PRKCA|ENSG00000154229.7|protein kinase C, alpha
hg19_v2_chr2_+_9614652_9614704	0.0147383	AAUACUG	ENST00000497473.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 	ENST00000470914.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 	ENST00000481367.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 	ENST00000545602.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
hg19_v2_chr1_+_197881592_197881635	0.0144167	AAUACUG	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr9_+_78505581_78505621	0.0141063	AAUACUG	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr1_+_40627038_40627071	0.0127023	AAUACUG	ENST00000372771.4|RLF|ENSG00000117000.8|rearranged L-myc fusion
hg19_v2_chr12_-_57824739_57824834	0.0125458	AAUACUG	ENST00000347140.3|R3HDM2|ENSG00000179912.15|R3H domain containing 2 	ENST00000402412.1|R3HDM2|ENSG00000179912.15|R3H domain containing 2
hg19_v2_chr13_-_79979919_79979945	0.0123458	AAUACUG	ENST00000267229.7|RBM26|ENSG00000139746.11|RNA binding motif protein 26
hg19_v2_chr6_-_34360413_34360453	0.0114241	AAUACUG	ENST00000607016.1|NUDT3|ENSG00000272325.1|nudix (nucleoside diphosphate linked moiety X)-type motif 3
hg19_v2_chr12_+_93771659_93771710	0.0112412	AAUACUG	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr7_-_19748640_19748710	0.00900758	AAUACUG	ENST00000222567.5|TWISTNB|ENSG00000105849.5|TWIST neighbor
hg19_v2_chr2_+_198380289_198380305	0.00852249	AAUACUG	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr15_+_69591235_69591299	0.00810746	AAUACUG	ENST00000395407.2|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V 	ENST00000558684.1|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V
hg19_v2_chr16_+_69373323_69373371	0.00777935	AAUACUG	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr10_-_121356007_121356147	0.0075829	AAUACUG	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr21_-_15755446_15755508	0.00734688	AAUACUG	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr3_-_88108192_88108203	0.00708008	AAUACUG	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr7_+_102937869_102937909	0.00696008	AAUACUG	ENST00000249269.4|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta 	ENST00000428154.1|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta 	ENST00000420236.2|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta
hg19_v2_chr3_-_27498235_27498278	0.00681145	AAUACUG	ENST00000295736.5|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428386.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428179.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg19_v2_chr17_-_37607497_37607539	0.00657163	AAUACUG	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chrX_-_41782249_41782287	0.0061286	AAUACUG	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr17_-_72919317_72919368	0.00581373	AAUACUG	ENST00000319642.1|USH1G|ENSG00000182040.4|Usher syndrome 1G (autosomal recessive)
hg19_v2_chr5_-_142783175_142783297	0.00540864	AAUACUG	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr1_-_1624083_1624167	0.00478569	AAUACUG	ENST00000378662.1|SLC35E2B|ENSG00000189339.7|solute carrier family 35, member E2B 	ENST00000234800.6|SLC35E2B|ENSG00000189339.7|solute carrier family 35, member E2B
hg19_v2_chr3_-_71774516_71774587	0.00412956	AAUACUG	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr10_+_11206925_11206993	0.00220947	AAUACUG	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr10_-_99052382_99052413	0.000441102	AAUACUG	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr1_+_87794150_87794172	0.000338606	AAUACUG	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr1_-_213189108_213189154	0.000278525	AAUACUG	ENST00000535388.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr15_-_101792137_101792159	0.000160451	AAUACUG	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
