hg19_v2_chr7_-_27196267_27196311	4.05189	AGGUAGU	ENST00000242159.3|HOXA7|ENSG00000122592.6|homeobox A7
hg19_v2_chr12_+_54402790_54402832	3.20663	AGGUAGU	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr18_+_6834472_6834495	2.92308	AGGUAGU	ENST00000581099.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000419673.2|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000531294.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr9_-_16870704_16870841	2.83505	AGGUAGU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr7_+_94023873_94023873	2.73386	AGGUAGU	ENST00000297268.6|COL1A2|ENSG00000164692.13|collagen, type I, alpha 2
hg19_v2_chr17_-_48278983_48278999	2.68322	AGGUAGU	ENST00000225964.5|COL1A1|ENSG00000108821.9|collagen, type I, alpha 1
hg19_v2_chr2_+_189839046_189839105	2.54234	AGGUAGU	ENST00000304636.3|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1 	ENST00000317840.5|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1
hg19_v2_chr17_-_46688334_46688385	2.34494	AGGUAGU	ENST00000239165.7|HOXB7|ENSG00000260027.3|homeobox B7
hg19_v2_chr7_-_27183263_27183287	2.34245	AGGUAGU	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr5_-_153857819_153857824	2.32304	AGGUAGU	ENST00000231121.2|HAND1|ENSG00000113196.2|heart and neural crest derivatives expressed 1
hg19_v2_chr17_-_46682321_46682362	2.28231	AGGUAGU	ENST00000225648.3|HOXB6|ENSG00000108511.8|homeobox B6 	ENST00000484302.2|HOXB6|ENSG00000108511.8|homeobox B6
hg19_v2_chrX_+_105066524_105066552	2.25044	AGGUAGU	ENST00000243300.9|NRK|ENSG00000123572.12|Nik related kinase 	ENST00000428173.2|NRK|ENSG00000123572.12|Nik related kinase
hg19_v2_chr7_-_27219632_27219660	2.12328	AGGUAGU	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr3_-_120003941_120004083	1.79797	AGGUAGU	ENST00000464295.1|GPR156|ENSG00000175697.6|G protein-coupled receptor 156
hg19_v2_chr6_-_94129244_94129284	1.7453	AGGUAGU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr7_-_27205136_27205164	1.53722	AGGUAGU	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr5_-_158526756_158526797	1.52216	AGGUAGU	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr18_+_19749386_19749404	1.49014	AGGUAGU	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chrX_-_132549506_132549526	1.47425	AGGUAGU	ENST00000370828.3|GPC4|ENSG00000076716.7|glypican 4
hg19_v2_chr9_+_132934835_132934857	1.45011	AGGUAGU	ENST00000372398.3|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr5_+_38846101_38846174	1.33679	AGGUAGU	ENST00000274276.3|OSMR|ENSG00000145623.8|oncostatin M receptor
hg19_v2_chr15_-_65715401_65715421	1.33148	AGGUAGU	ENST00000352385.2|IGDCC4|ENSG00000103742.7|immunoglobulin superfamily, DCC subclass, member 4
hg19_v2_chr6_-_35464727_35464738	1.31965	AGGUAGU	ENST00000402886.3|TEAD3|ENSG00000007866.14|TEA domain family member 3
hg19_v2_chr1_+_164528866_164528877	1.27978	AGGUAGU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr19_-_47975417_47975441	1.23754	AGGUAGU	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr22_+_48972118_48972153	1.20626	AGGUAGU	ENST00000358295.5|FAM19A5|ENSG00000219438.4|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
hg19_v2_chr12_+_66217911_66218018	1.20226	AGGUAGU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr12_-_59313270_59313327	1.16586	AGGUAGU	ENST00000379141.4|LRIG3|ENSG00000139263.7|leucine-rich repeats and immunoglobulin-like domains 3
hg19_v2_chr11_+_63580855_63580889	1.16031	AGGUAGU	ENST00000294244.4|C11orf84|ENSG00000168005.4|chromosome 11 open reading frame 84
hg19_v2_chr9_+_109625378_109625458	1.14857	AGGUAGU	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr17_+_8213590_8213603	1.09983	AGGUAGU	ENST00000361926.3|ARHGEF15|ENSG00000198844.6|Rho guanine nucleotide exchange factor (GEF) 15
hg19_v2_chr11_+_63870660_63870660	1.0886	AGGUAGU	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr3_-_48229846_48229918	0.975569	AGGUAGU	ENST00000302506.3|CDC25A|ENSG00000164045.7|cell division cycle 25A 	ENST00000351231.3|CDC25A|ENSG00000164045.7|cell division cycle 25A 	ENST00000437972.1|CDC25A|ENSG00000164045.7|cell division cycle 25A
hg19_v2_chr3_-_21792838_21792927	0.939042	AGGUAGU	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr16_+_29789561_29789606	0.930922	AGGUAGU	ENST00000400752.4|ZG16|ENSG00000174992.6|zymogen granule protein 16
hg19_v2_chr19_-_51054299_51054299	0.92325	AGGUAGU	ENST00000599957.1|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B
hg19_v2_chr7_+_94285637_94285689	0.91613	AGGUAGU	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr5_+_172068232_172068320	0.912148	AGGUAGU	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr9_-_125693757_125693818	0.816808	AGGUAGU	ENST00000373656.3|ZBTB26|ENSG00000171448.8|zinc finger and BTB domain containing 26
hg19_v2_chr9_+_19408999_19409057	0.799123	AGGUAGU	ENST00000340967.2|ACER2|ENSG00000177076.4|alkaline ceramidase 2
hg19_v2_chr20_+_306221_306239	0.78707	AGGUAGU	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr7_-_83824169_83824217	0.778653	AGGUAGU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr6_-_42419649_42419789	0.770503	AGGUAGU	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr8_+_121137333_121137352	0.722813	AGGUAGU	ENST00000309791.4|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000297848.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000247781.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1
hg19_v2_chr1_-_86622421_86622460	0.684073	AGGUAGU	ENST00000370571.2|COL24A1|ENSG00000171502.10|collagen, type XXIV, alpha 1
hg19_v2_chr12_-_25102252_25102393	0.683038	AGGUAGU	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr12_+_65004292_65004306	0.675116	AGGUAGU	ENST00000542104.1|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3 	ENST00000336061.2|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3
hg19_v2_chr17_+_47074758_47074787	0.667809	AGGUAGU	ENST00000290341.3|IGF2BP1|ENSG00000159217.5|insulin-like growth factor 2 mRNA binding protein 1
hg19_v2_chr3_+_61547585_61547585	0.649908	AGGUAGU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr7_+_89841000_89841023	0.612923	AGGUAGU	ENST00000287908.3|STEAP2|ENSG00000157214.9|STEAP family member 2, metalloreductase
hg19_v2_chr1_-_92351769_92351787	0.596372	AGGUAGU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr8_-_82754427_82754539	0.533293	AGGUAGU	ENST00000353788.4|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000520618.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000518183.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000396330.2|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000519119.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000345957.4|SNX16|ENSG00000104497.9|sorting nexin 16
hg19_v2_chr14_-_20020272_20020272	0.502074	AGGUAGU	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr21_-_39870339_39870443	0.49551	AGGUAGU	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr4_-_42154895_42154895	0.494115	AGGUAGU	ENST00000502486.1|BEND4|ENSG00000188848.11|BEN domain containing 4 	ENST00000504360.1|BEND4|ENSG00000188848.11|BEN domain containing 4
hg19_v2_chr19_+_32836499_32836625	0.488609	AGGUAGU	ENST00000311921.4|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000544431.1|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000355898.5|ZNF507|ENSG00000168813.12|zinc finger protein 507
hg19_v2_chr9_-_79520989_79521003	0.45863	AGGUAGU	ENST00000376713.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000376718.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000428286.1|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila)
hg19_v2_chr8_+_22102626_22102748	0.450797	AGGUAGU	ENST00000519237.1|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa 	ENST00000397802.4|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
hg19_v2_chr2_+_232260254_232260274	0.441985	AGGUAGU	ENST00000287590.5|B3GNT7|ENSG00000156966.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
hg19_v2_chr16_-_4987065_4987156	0.435093	AGGUAGU	ENST00000590782.2|PPL|ENSG00000118898.11|periplakin 	ENST00000345988.2|PPL|ENSG00000118898.11|periplakin
hg19_v2_chr1_+_65210772_65210840	0.406413	AGGUAGU	ENST00000371072.4|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2 	ENST00000294428.3|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2
hg19_v2_chr15_-_44486632_44486664	0.39593	AGGUAGU	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr7_-_120498357_120498456	0.392459	AGGUAGU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr5_+_178286925_178287007	0.384094	AGGUAGU	ENST00000322434.3|ZNF354B|ENSG00000178338.6|zinc finger protein 354B
hg19_v2_chr10_-_38146510_38146576	0.376039	AGGUAGU	ENST00000395867.3|ZNF248|ENSG00000198105.7|zinc finger protein 248
hg19_v2_chr6_-_134373732_134373795	0.372387	AGGUAGU	ENST00000275230.5|SLC2A12|ENSG00000146411.5|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v2_chrX_-_83757399_83757487	0.372187	AGGUAGU	ENST00000373177.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000297977.5|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000506585.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000449553.2|HDX|ENSG00000165259.9|highly divergent homeobox
hg19_v2_chr4_+_106473768_106473804	0.358872	AGGUAGU	ENST00000265154.2|ARHGEF38|ENSG00000236699.4|Rho guanine nucleotide exchange factor (GEF) 38 	ENST00000420470.2|ARHGEF38|ENSG00000236699.4|Rho guanine nucleotide exchange factor (GEF) 38
hg19_v2_chr14_+_19553365_19553365	0.355222	AGGUAGU	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr6_-_33267101_33267170	0.351066	AGGUAGU	ENST00000497454.1|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr4_+_55095264_55095390	0.340572	AGGUAGU	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr18_-_74207146_74207183	0.335879	AGGUAGU	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr7_+_114055052_114055378	0.331708	AGGUAGU	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr8_-_28243934_28243993	0.318374	AGGUAGU	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr3_-_47823298_47823423	0.316175	AGGUAGU	ENST00000254480.5|SMARCC1|ENSG00000173473.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v2_chr18_+_76740189_76740275	0.315643	AGGUAGU	ENST00000537592.2|SALL3|ENSG00000256463.4|spalt-like transcription factor 3 	ENST00000575389.2|SALL3|ENSG00000256463.4|spalt-like transcription factor 3
hg19_v2_chr2_+_204192942_204193038	0.310702	AGGUAGU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr21_+_42539701_42539728	0.303558	AGGUAGU	ENST00000330333.6|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2 	ENST00000328735.6|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2 	ENST00000347667.5|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2
hg19_v2_chr9_+_6413317_6413418	0.300263	AGGUAGU	ENST00000276893.5|UHRF2|ENSG00000147854.12|ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 	ENST00000381373.3|UHRF2|ENSG00000147854.12|ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
hg19_v2_chr9_+_133710453_133710453	0.289492	AGGUAGU	ENST00000318560.5|ABL1|ENSG00000097007.13|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v2_chr8_+_58907104_58907131	0.279277	AGGUAGU	ENST00000361488.3|FAM110B|ENSG00000169122.7|family with sequence similarity 110, member B
hg19_v2_chr12_-_123450986_123451056	0.276145	AGGUAGU	ENST00000344275.7|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000442833.2|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000280560.8|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000540285.1|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000346530.5|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9
hg19_v2_chr4_-_100575781_100575805	0.272136	AGGUAGU	ENST00000511828.1|RP11-766F14.2|ENSG00000248713.1|Protein LOC285556
hg19_v2_chr12_-_57472522_57472556	0.267075	AGGUAGU	ENST00000379391.3|TMEM194A|ENSG00000166881.5|transmembrane protein 194A 	ENST00000300128.4|TMEM194A|ENSG00000166881.5|transmembrane protein 194A
hg19_v2_chr3_+_50712672_50712703	0.261705	AGGUAGU	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr10_+_72238517_72238595	0.261479	AGGUAGU	ENST00000263563.6|PALD1|ENSG00000107719.8|phosphatase domain containing, paladin 1
hg19_v2_chr9_-_127533519_127533576	0.260157	AGGUAGU	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chrX_+_17393543_17393543	0.254814	AGGUAGU	ENST00000380060.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr2_-_50574856_50574892	0.24964	AGGUAGU	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr2_+_170590321_170590408	0.245458	AGGUAGU	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr9_+_128509624_128509658	0.242307	AGGUAGU	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr8_+_81397876_81397902	0.238578	AGGUAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr12_-_42877764_42877803	0.23362	AGGUAGU	ENST00000455697.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr3_-_28390581_28390618	0.232857	AGGUAGU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr16_+_69221028_69221092	0.228274	AGGUAGU	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr19_+_531713_531748	0.228203	AGGUAGU	ENST00000215574.4|CDC34|ENSG00000099804.4|cell division cycle 34
hg19_v2_chr5_+_153825510_153825529	0.222066	AGGUAGU	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr19_+_14063278_14063304	0.221156	AGGUAGU	ENST00000254337.6|DCAF15|ENSG00000132017.6|DDB1 and CUL4 associated factor 15
hg19_v2_chr4_+_17616253_17616275	0.214648	AGGUAGU	ENST00000237380.7|MED28|ENSG00000118579.7|mediator complex subunit 28
hg19_v2_chr1_-_17766198_17766232	0.211229	AGGUAGU	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr12_+_110940005_110940100	0.202752	AGGUAGU	ENST00000409246.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000392672.4|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000409300.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe) 	ENST00000409425.1|RAD9B|ENSG00000151164.14|RAD9 homolog B (S. pombe)
hg19_v2_chr10_+_68685764_68685801	0.201753	AGGUAGU	ENST00000361320.4|LRRTM3|ENSG00000198739.6|leucine rich repeat transmembrane neuronal 3
hg19_v2_chr9_+_99212403_99212536	0.195524	AGGUAGU	ENST00000375251.3|HABP4|ENSG00000130956.9|hyaluronan binding protein 4 	ENST00000375249.4|HABP4|ENSG00000130956.9|hyaluronan binding protein 4
hg19_v2_chr3_+_110790590_110790603	0.195439	AGGUAGU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr15_+_66994561_66994597	0.191523	AGGUAGU	ENST00000288840.5|SMAD6|ENSG00000137834.10|SMAD family member 6
hg19_v2_chr16_+_22217577_22217667	0.187612	AGGUAGU	ENST00000263026.5|EEF2K|ENSG00000103319.7|eukaryotic elongation factor-2 kinase
hg19_v2_chr14_-_57735528_57735726	0.176425	AGGUAGU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr1_+_50574585_50574638	0.175848	AGGUAGU	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr7_-_98741642_98741713	0.172761	AGGUAGU	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr15_+_36887069_36887101	0.164985	AGGUAGU	ENST00000566807.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000567389.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000562877.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41
hg19_v2_chr16_+_447209_447225	0.160105	AGGUAGU	ENST00000382940.4|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4 	ENST00000219479.2|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4
hg19_v2_chr6_+_133562472_133562556	0.160018	AGGUAGU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr3_+_49209023_49209063	0.159703	AGGUAGU	ENST00000332780.2|KLHDC8B|ENSG00000185909.10|kelch domain containing 8B
hg19_v2_chr15_+_38544476_38544574	0.156168	AGGUAGU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr6_-_99797522_99797572	0.147569	AGGUAGU	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chrX_-_134186144_134186228	0.139299	AGGUAGU	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chrX_+_134166333_134166371	0.137596	AGGUAGU	ENST00000257013.7|FAM127A|ENSG00000134590.9|family with sequence similarity 127, member A
hg19_v2_chr1_+_109102652_109102728	0.134108	AGGUAGU	ENST00000370035.3|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B 	ENST00000405454.1|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B
hg19_v2_chr11_-_110583451_110583451	0.13231	AGGUAGU	ENST00000260283.4|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20 	ENST00000528829.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr1_+_153232160_153232176	0.124734	AGGUAGU	ENST00000368742.3|LOR|ENSG00000203782.5|loricrin
hg19_v2_chr1_+_113615794_113615884	0.120829	AGGUAGU	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr6_+_134274322_134274342	0.114905	AGGUAGU	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr12_-_102874416_102874425	0.111417	AGGUAGU	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr17_-_46608272_46608385	0.10662	AGGUAGU	ENST00000577092.1|HOXB1|ENSG00000120094.6|homeobox B1 	ENST00000239174.6|HOXB1|ENSG00000120094.6|homeobox B1
hg19_v2_chr17_+_30771279_30771536	0.0939416	AGGUAGU	ENST00000261712.3|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000578213.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000457654.2|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000579451.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
hg19_v2_chr12_-_77459306_77459365	0.0884855	AGGUAGU	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr12_-_112123726_112123809	0.087258	AGGUAGU	ENST00000419234.4|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr12_+_118814344_118814369	0.0858201	AGGUAGU	ENST00000397564.2|SUDS3|ENSG00000111707.7|suppressor of defective silencing 3 homolog (S. cerevisiae)
hg19_v2_chr10_+_98592009_98592061	0.0801237	AGGUAGU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr15_-_50411412_50411437	0.0790083	AGGUAGU	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr12_+_4382917_4382938	0.0696685	AGGUAGU	ENST00000261254.3|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr14_+_72399833_72399952	0.0587022	AGGUAGU	ENST00000553530.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6 	ENST00000556437.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6
hg19_v2_chr9_-_135819987_135820020	0.0512999	AGGUAGU	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr14_-_81687197_81687280	0.0446617	AGGUAGU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr12_-_76478686_76478813	0.0429978	AGGUAGU	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chrX_+_95939711_95939786	0.0397219	AGGUAGU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr12_+_123868320_123868320	0.038816	AGGUAGU	ENST00000402868.3|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8 	ENST00000330479.4|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8
hg19_v2_chr18_+_9475668_9475698	0.0369038	AGGUAGU	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chr17_+_38375574_38375615	0.0350331	AGGUAGU	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr2_+_179345173_179345221	0.0340916	AGGUAGU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr7_+_35840542_35840671	0.0332053	AGGUAGU	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr9_-_111929560_111929571	0.0323488	AGGUAGU	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr4_+_20702059_20702104	0.0277732	AGGUAGU	ENST00000444671.2|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000510700.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000506745.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514663.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509469.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000515339.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513861.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502374.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000538990.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000504630.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513590.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514292.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502938.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509625.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000505160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000507634.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513459.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511089.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like
hg19_v2_chr9_+_110045537_110045572	0.0224581	AGGUAGU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr12_-_29534074_29534127	0.0214185	AGGUAGU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr17_+_53342311_53342400	0.0205305	AGGUAGU	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr17_-_61850894_61851135	0.0196322	AGGUAGU	ENST00000403162.3|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000582252.1|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000225726.5|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47
hg19_v2_chr18_+_67068228_67068291	0.0186877	AGGUAGU	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr6_+_107349392_107349461	0.0173236	AGGUAGU	ENST00000443043.1|C6orf203|ENSG00000130349.5|chromosome 6 open reading frame 203 	ENST00000405204.2|C6orf203|ENSG00000130349.5|chromosome 6 open reading frame 203 	ENST00000311381.5|C6orf203|ENSG00000130349.5|chromosome 6 open reading frame 203
hg19_v2_chr9_-_14693417_14693469	0.0168323	AGGUAGU	ENST00000380916.4|ZDHHC21|ENSG00000175893.7|zinc finger, DHHC-type containing 21
hg19_v2_chr5_-_74326724_74326724	0.0151738	AGGUAGU	ENST00000322348.4|GCNT4|ENSG00000176928.4|glucosaminyl (N-acetyl) transferase 4, core 2
hg19_v2_chr16_-_4166186_4166186	0.0141491	AGGUAGU	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chrX_-_24045303_24045303	0.0134368	AGGUAGU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr21_+_47878757_47879024	0.0111132	AGGUAGU	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr18_-_18691739_18691812	0.00648278	AGGUAGU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr3_-_150264272_150264428	0.00518101	AGGUAGU	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr2_-_39664405_39664453	0.0048057	AGGUAGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr1_-_179198702_179198741	0.00330373	AGGUAGU	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr16_-_30621663_30621718	0.00164949	AGGUAGU	ENST00000287461.3|ZNF689|ENSG00000156853.7|zinc finger protein 689
hg19_v2_chr2_+_242641442_242641478	0.0011278	AGGUAGU	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
