hg19_v2_chr5_+_175223313_175223349	7.60828	AUGGCUU	ENST00000359546.4|CPLX2|ENSG00000145920.10|complexin 2
hg19_v2_chr8_+_24772455_24772535	5.96638	AUGGCUU	ENST00000433454.2|NEFM|ENSG00000104722.9|neurofilament, medium polypeptide
hg19_v2_chr9_-_19786926_19786926	4.92724	AUGGCUU	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr9_-_93405352_93405386	4.45935	AUGGCUU	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chr6_+_123317116_123317260	4.3974	AUGGCUU	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chrX_+_12156582_12156603	4.33059	AUGGCUU	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr1_+_181452678_181452716	4.2049	AUGGCUU	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr5_-_45696253_45696427	4.19684	AUGGCUU	ENST00000303230.4|HCN1|ENSG00000164588.4|hyperpolarization activated cyclic nucleotide-gated potassium channel 1
hg19_v2_chr19_+_589893_589911	4.12441	AUGGCUU	ENST00000251287.2|HCN2|ENSG00000099822.2|hyperpolarization activated cyclic nucleotide-gated potassium channel 2
hg19_v2_chr15_+_27111510_27111644	4.11187	AUGGCUU	ENST00000335625.5|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr19_-_17799008_17799122	3.96857	AUGGCUU	ENST00000519716.2|UNC13A|ENSG00000130477.10|unc-13 homolog A (C. elegans)
hg19_v2_chr3_+_49591881_49591940	3.74575	AUGGCUU	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr2_+_166095898_166095940	3.73317	AUGGCUU	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr12_-_14133053_14133159	3.60624	AUGGCUU	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chrX_-_154493791_154493874	3.5457	AUGGCUU	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr12_+_79258547_79258607	3.46659	AUGGCUU	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr1_+_209757051_209757074	3.39103	AUGGCUU	ENST00000009105.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000423146.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000361322.2|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG
hg19_v2_chr4_+_47033345_47033377	3.35226	AUGGCUU	ENST00000295454.3|GABRB1|ENSG00000163288.9|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg19_v2_chr5_-_160973649_160973713	3.29053	AUGGCUU	ENST00000393959.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2 	ENST00000517547.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg19_v2_chr6_-_99797522_99797572	3.25121	AUGGCUU	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr15_+_59730348_59730435	3.19114	AUGGCUU	ENST00000288228.5|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000559628.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000557914.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000560474.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A
hg19_v2_chr7_+_31092076_31092106	3.15698	AUGGCUU	ENST00000304166.4|ADCYAP1R1|ENSG00000078549.10|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
hg19_v2_chr17_-_9929581_9929626	3.04817	AUGGCUU	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr15_+_91643442_91643521	2.94518	AUGGCUU	ENST00000394232.1|SV2B|ENSG00000185518.7|synaptic vesicle glycoprotein 2B
hg19_v2_chr5_-_136834982_136835037	2.91205	AUGGCUU	ENST00000510689.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 	ENST00000394945.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v2_chr2_-_2334888_2335053	2.89613	AUGGCUU	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr11_-_118047376_118047388	2.89074	AUGGCUU	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr2_-_40679186_40679297	2.84848	AUGGCUU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr16_+_58497567_58497586	2.82142	AUGGCUU	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr9_+_77112244_77112281	2.7206	AUGGCUU	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr19_-_55954230_55954230	2.6992	AUGGCUU	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr10_-_1779663_1779676	2.67175	AUGGCUU	ENST00000381312.1|ADARB2|ENSG00000185736.11|adenosine deaminase, RNA-specific, B2 (non-functional)
hg19_v2_chr19_-_38714847_38714890	2.53069	AUGGCUU	ENST00000420980.2|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1 	ENST00000355526.4|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1
hg19_v2_chr8_+_104831472_104831510	2.50073	AUGGCUU	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr6_+_96463840_96463892	2.46654	AUGGCUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr17_-_78450398_78450413	2.45014	AUGGCUU	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chrX_-_24690771_24690794	2.41648	AUGGCUU	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr1_+_159141397_159141549	2.39491	AUGGCUU	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr11_+_62475130_62475195	2.3874	AUGGCUU	ENST00000294117.5|GNG3|ENSG00000162188.5|guanine nucleotide binding protein (G protein), gamma 3
hg19_v2_chr7_+_30174426_30174441	2.38302	AUGGCUU	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr1_-_229478236_229478308	2.35908	AUGGCUU	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr16_-_755819_755860	2.32613	AUGGCUU	ENST00000397621.1|FBXL16|ENSG00000127585.7|F-box and leucine-rich repeat protein 16
hg19_v2_chr5_+_112043186_112043225	2.31037	AUGGCUU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr1_+_107683644_107683673	2.30457	AUGGCUU	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr8_-_27115903_27115927	2.30198	AUGGCUU	ENST00000350889.4|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519997.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519614.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000522908.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000265770.7|STMN4|ENSG00000015592.12|stathmin-like 4
hg19_v2_chr6_+_24126350_24126497	2.26653	AUGGCUU	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr18_+_72201829_72201845	2.26394	AUGGCUU	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr8_+_1449532_1449532	2.22041	AUGGCUU	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr17_-_7832753_7832753	2.18989	AUGGCUU	ENST00000303790.2|KCNAB3|ENSG00000170049.5|potassium voltage-gated channel, shaker-related subfamily, beta member 3
hg19_v2_chr20_-_9819479_9819532	2.16868	AUGGCUU	ENST00000378423.1|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7 	ENST00000353224.5|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr3_-_56502375_56502428	2.15674	AUGGCUU	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr19_-_51141196_51141302	2.11602	AUGGCUU	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr6_+_138483058_138483159	2.11437	AUGGCUU	ENST00000251691.4|KIAA1244|ENSG00000112379.8|KIAA1244
hg19_v2_chr15_-_48470558_48470714	2.00394	AUGGCUU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chr13_-_67804445_67804475	1.82453	AUGGCUU	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr12_+_111471828_111471975	1.81268	AUGGCUU	ENST00000261726.6|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr5_-_147162078_147162106	1.81205	AUGGCUU	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr6_+_72596604_72596727	1.78267	AUGGCUU	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_+_42846443_42846502	1.77683	AUGGCUU	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr2_+_155554797_155554837	1.75382	AUGGCUU	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr17_+_11144580_11144740	1.71613	AUGGCUU	ENST00000441885.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000432116.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000409168.3|SHISA6|ENSG00000188803.10|shisa family member 6
hg19_v2_chr17_+_40834580_40834633	1.71289	AUGGCUU	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr3_+_159943362_159943423	1.68855	AUGGCUU	ENST00000326474.3|C3orf80|ENSG00000180044.3|chromosome 3 open reading frame 80
hg19_v2_chr20_+_42875887_42875921	1.68112	AUGGCUU	ENST00000342560.5|GDAP1L1|ENSG00000124194.11|ganglioside induced differentiation associated protein 1-like 1
hg19_v2_chrX_+_152783131_152783151	1.6512	AUGGCUU	ENST00000349466.2|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3 	ENST00000370186.1|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3
hg19_v2_chr4_-_819901_819986	1.6397	AUGGCUU	ENST00000304062.6|CPLX1|ENSG00000168993.10|complexin 1
hg19_v2_chr1_+_161228517_161228542	1.61816	AUGGCUU	ENST00000504449.1|PCP4L1|ENSG00000248485.1|Purkinje cell protein 4 like 1
hg19_v2_chr8_-_133493200_133493352	1.59864	AUGGCUU	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr12_+_108525517_108525531	1.59178	AUGGCUU	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr7_-_86688990_86689026	1.57025	AUGGCUU	ENST00000450689.2|KIAA1324L|ENSG00000164659.10|KIAA1324-like
hg19_v2_chr17_+_56833184_56833249	1.55836	AUGGCUU	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr16_+_8768422_8768453	1.54524	AUGGCUU	ENST00000268251.8|ABAT|ENSG00000183044.7|4-aminobutyrate aminotransferase 	ENST00000564714.1|ABAT|ENSG00000183044.7|4-aminobutyrate aminotransferase
hg19_v2_chr7_+_140774032_140774032	1.53172	AUGGCUU	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr1_+_171810606_171810649	1.49923	AUGGCUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr18_+_55018044_55018044	1.49584	AUGGCUU	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr19_-_2702681_2702707	1.45354	AUGGCUU	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr5_+_82767284_82767310	1.4308	AUGGCUU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr4_+_57371509_57371509	1.42786	AUGGCUU	ENST00000360096.2|ARL9|ENSG00000196503.2|ADP-ribosylation factor-like 9
hg19_v2_chr1_+_162039558_162039587	1.39912	AUGGCUU	ENST00000530878.1|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENST00000361897.5|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein
hg19_v2_chr18_+_905104_905118	1.38648	AUGGCUU	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chrX_-_13956737_13956808	1.36875	AUGGCUU	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr11_+_121322832_121322912	1.36533	AUGGCUU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr18_+_32558208_32558340	1.34123	AUGGCUU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr7_-_87849340_87849395	1.31824	AUGGCUU	ENST00000419179.1|SRI|ENSG00000075142.9|sorcin 	ENST00000265729.2|SRI|ENSG00000075142.9|sorcin
hg19_v2_chr12_+_101188547_101188585	1.29976	AUGGCUU	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr6_+_11094266_11094506	1.26827	AUGGCUU	ENST00000416247.2|SMIM13|ENSG00000224531.4|small integral membrane protein 13
hg19_v2_chr4_-_87281224_87281375	1.24822	AUGGCUU	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr1_-_233431458_233431489	1.24805	AUGGCUU	ENST00000258229.9|PCNXL2|ENSG00000135749.14|pecanex-like 2 (Drosophila) 	ENST00000430153.1|PCNXL2|ENSG00000135749.14|pecanex-like 2 (Drosophila)
hg19_v2_chr7_-_32338917_32338946	1.23042	AUGGCUU	ENST00000396193.1|PDE1C|ENSG00000154678.12|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v2_chr1_-_155942086_155942145	1.21871	AUGGCUU	ENST00000368315.4|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr2_-_47798044_47798132	1.20126	AUGGCUU	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr11_-_1593150_1593150	1.18971	AUGGCUU	ENST00000397374.3|DUSP8|ENSG00000184545.6|dual specificity phosphatase 8
hg19_v2_chr20_-_48099182_48099214	1.17988	AUGGCUU	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr10_-_62149433_62149488	1.14038	AUGGCUU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr1_+_38259540_38259569	1.1374	AUGGCUU	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr4_+_93225550_93225641	1.13236	AUGGCUU	ENST00000282020.4|GRID2|ENSG00000152208.7|glutamate receptor, ionotropic, delta 2
hg19_v2_chr21_-_39288743_39288765	1.132	AUGGCUU	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr1_-_37499726_37499850	1.12896	AUGGCUU	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr4_+_99182593_99182669	1.10095	AUGGCUU	ENST00000508213.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408927.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000514122.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000453712.2|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000511212.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408900.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000339360.5|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1
hg19_v2_chr11_-_13484713_13484850	1.08943	AUGGCUU	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr2_-_213403565_213403584	1.08215	AUGGCUU	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr2_-_175351744_175351828	1.05969	AUGGCUU	ENST00000295500.4|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392552.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392551.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155
hg19_v2_chr10_+_105253661_105253736	1.0548	AUGGCUU	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr19_-_44143939_44144010	1.04353	AUGGCUU	ENST00000222374.2|CADM4|ENSG00000105767.2|cell adhesion molecule 4
hg19_v2_chr11_-_119599794_119599857	1.02857	AUGGCUU	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chrX_+_37430822_37430914	1.01877	AUGGCUU	ENST00000378621.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial) 	ENST00000378619.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial)
hg19_v2_chr8_+_94929168_94929235	1.01092	AUGGCUU	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr11_-_117186946_117186981	0.999107	AUGGCUU	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr4_-_42659102_42659161	0.996942	AUGGCUU	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr22_-_37099555_37099603	0.970125	AUGGCUU	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr7_-_117513540_117513587	0.967059	AUGGCUU	ENST00000160373.3|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr15_-_34628951_34629045	0.950677	AUGGCUU	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr17_-_8066250_8066301	0.937777	AUGGCUU	ENST00000488857.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000481878.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000498285.1|RP11-599B13.6|ENSG00000263620.1|Uncharacterized protein  	ENST00000316509.6|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2)
hg19_v2_chr1_-_72748417_72748510	0.937467	AUGGCUU	ENST00000357731.5|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr6_-_11044509_11044582	0.895083	AUGGCUU	ENST00000354666.3|ELOVL2|ENSG00000197977.3|ELOVL fatty acid elongase 2
hg19_v2_chr7_+_152456829_152456900	0.894408	AUGGCUU	ENST00000377776.3|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000256001.8|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000397282.2|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast)
hg19_v2_chr8_-_18871159_18871201	0.889313	AUGGCUU	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr8_-_4852218_4852246	0.865635	AUGGCUU	ENST00000400186.3|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1 	ENST00000602723.1|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1
hg19_v2_chr11_+_20620946_20620946	0.856435	AUGGCUU	ENST00000525748.1|SLC6A5|ENSG00000165970.7|solute carrier family 6 (neurotransmitter transporter), member 5
hg19_v2_chr17_-_56494713_56494851	0.852298	AUGGCUU	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr7_-_71801980_71802013	0.821472	AUGGCUU	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr1_-_101360331_101360373	0.797494	AUGGCUU	ENST00000416479.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2 	ENST00000370113.3|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr12_-_25102252_25102393	0.794918	AUGGCUU	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr9_-_127905736_127905815	0.768106	AUGGCUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr9_-_73736511_73736546	0.760145	AUGGCUU	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr11_-_95657231_95657459	0.734759	AUGGCUU	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chrX_+_37865804_37865842	0.733557	AUGGCUU	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr1_-_166944652_166944733	0.733514	AUGGCUU	ENST00000528703.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000525740.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000529387.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000469934.2|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000529071.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000526687.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2
hg19_v2_chr2_-_175499294_175499339	0.731078	AUGGCUU	ENST00000392547.2|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr7_-_75988321_75988348	0.70938	AUGGCUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr9_+_15553055_15553101	0.709015	AUGGCUU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr10_+_103113802_103113820	0.698328	AUGGCUU	ENST00000370187.3|BTRC|ENSG00000166167.13|beta-transducin repeat containing E3 ubiquitin protein ligase
hg19_v2_chr3_+_138066539_138066580	0.690608	AUGGCUU	ENST00000289104.4|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr6_+_87865262_87865339	0.687433	AUGGCUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr21_-_32931290_32931341	0.684287	AUGGCUU	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr13_+_98086445_98086493	0.68395	AUGGCUU	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr20_+_57766075_57766075	0.67942	AUGGCUU	ENST00000371030.2|ZNF831|ENSG00000124203.5|zinc finger protein 831
hg19_v2_chr12_+_104850740_104850768	0.672712	AUGGCUU	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr10_+_76586348_76586400	0.668423	AUGGCUU	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr8_-_89339705_89339721	0.667159	AUGGCUU	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr18_+_32073253_32073339	0.663208	AUGGCUU	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr6_+_33387868_33387941	0.65631	AUGGCUU	ENST00000418600.2|SYNGAP1|ENSG00000197283.8|synaptic Ras GTPase activating protein 1
hg19_v2_chrX_-_53310791_53310816	0.652136	AUGGCUU	ENST00000375365.2|IQSEC2|ENSG00000124313.8|IQ motif and Sec7 domain 2
hg19_v2_chr8_-_145559943_145559943	0.651028	AUGGCUU	ENST00000332135.4|SCRT1|ENSG00000170616.9|scratch family zinc finger 1
hg19_v2_chr3_-_119813264_119813272	0.650097	AUGGCUU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr18_+_8717369_8717384	0.621383	AUGGCUU	ENST00000359865.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000400050.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000306285.7|SOGA2|ENSG00000168502.13|SOGA family member 2
hg19_v2_chr3_+_142442841_142443011	0.609004	AUGGCUU	ENST00000476941.1|TRPC1|ENSG00000144935.10|transient receptor potential cation channel, subfamily C, member 1 	ENST00000273482.6|TRPC1|ENSG00000144935.10|transient receptor potential cation channel, subfamily C, member 1
hg19_v2_chr7_-_83824169_83824217	0.596413	AUGGCUU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr16_-_47177874_47177922	0.593261	AUGGCUU	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr1_-_33338076_33338105	0.579117	AUGGCUU	ENST00000496770.1|FNDC5|ENSG00000160097.11|fibronectin type III domain containing 5
hg19_v2_chr5_+_75378997_75379080	0.577786	AUGGCUU	ENST00000502798.2|SV2C|ENSG00000122012.9|synaptic vesicle glycoprotein 2C
hg19_v2_chr18_+_59854480_59854551	0.577628	AUGGCUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chrX_+_152953505_152953554	0.576489	AUGGCUU	ENST00000253122.5|SLC6A8|ENSG00000130821.11|solute carrier family 6 (neurotransmitter transporter), member 8
hg19_v2_chr1_-_40137710_40137824	0.566137	AUGGCUU	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr10_-_89577910_89578010	0.566038	AUGGCUU	ENST00000308448.7|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1 	ENST00000541004.1|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1
hg19_v2_chr1_+_203595903_203595934	0.550638	AUGGCUU	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr1_+_97187318_97187380	0.550434	AUGGCUU	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr11_-_94964354_94964374	0.547535	AUGGCUU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr13_+_80055284_80055295	0.545201	AUGGCUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr14_+_23775971_23776000	0.532593	AUGGCUU	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr11_-_77532050_77532066	0.531985	AUGGCUU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr12_+_56367697_56367893	0.531641	AUGGCUU	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr9_-_79520989_79521003	0.527632	AUGGCUU	ENST00000376713.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000376718.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000428286.1|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila)
hg19_v2_chr2_-_129076151_129076151	0.527405	AUGGCUU	ENST00000259241.6|HS6ST1|ENSG00000136720.6|heparan sulfate 6-O-sulfotransferase 1
hg19_v2_chr12_-_58027138_58027159	0.525591	AUGGCUU	ENST00000341156.4|B4GALNT1|ENSG00000135454.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
hg19_v2_chr10_+_25463951_25463991	0.516949	AUGGCUU	ENST00000376351.3|GPR158|ENSG00000151025.9|G protein-coupled receptor 158
hg19_v2_chr19_-_40324255_40324296	0.508872	AUGGCUU	ENST00000593685.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000600611.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr1_-_150208291_150208309	0.507631	AUGGCUU	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr14_-_94254821_94254836	0.502068	AUGGCUU	ENST00000393140.1|PRIMA1|ENSG00000175785.8|proline rich membrane anchor 1
hg19_v2_chr6_-_94129244_94129284	0.500896	AUGGCUU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr1_+_110527308_110527349	0.494295	AUGGCUU	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chr15_-_45815005_45815032	0.488809	AUGGCUU	ENST00000261867.4|SLC30A4|ENSG00000104154.5|solute carrier family 30 (zinc transporter), member 4
hg19_v2_chr12_+_27396901_27397108	0.484869	AUGGCUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr2_+_7057523_7057613	0.483915	AUGGCUU	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chrX_+_103411189_103411301	0.468027	AUGGCUU	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr1_-_231004220_231004399	0.46608	AUGGCUU	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr1_-_154842741_154842772	0.463124	AUGGCUU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr16_-_71758602_71758604	0.452662	AUGGCUU	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr10_+_97515409_97515442	0.442739	AUGGCUU	ENST00000371207.3|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1 	ENST00000543964.1|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v2_chr5_-_35230771_35230794	0.43827	AUGGCUU	ENST00000342362.5|PRLR|ENSG00000113494.12|prolactin receptor
hg19_v2_chr11_+_22214708_22214730	0.432129	AUGGCUU	ENST00000324559.8|ANO5|ENSG00000171714.10|anoctamin 5
hg19_v2_chr1_-_166845515_166845564	0.43086	AUGGCUU	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr10_-_99052382_99052413	0.428193	AUGGCUU	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr15_-_33360085_33360256	0.420931	AUGGCUU	ENST00000334528.9|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr3_+_169684553_169684616	0.416853	AUGGCUU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr12_+_4382917_4382938	0.401492	AUGGCUU	ENST00000261254.3|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chrX_-_135849484_135849551	0.399823	AUGGCUU	ENST00000370620.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENST00000535227.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg19_v2_chr4_+_71768043_71768095	0.394328	AUGGCUU	ENST00000502869.1|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000309395.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000396051.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B
hg19_v2_chr1_-_76076793_76076803	0.394135	AUGGCUU	ENST00000370859.3|SLC44A5|ENSG00000137968.12|solute carrier family 44, member 5
hg19_v2_chr8_-_143696833_143696833	0.393538	AUGGCUU	ENST00000356613.2|ARC|ENSG00000198576.2|activity-regulated cytoskeleton-associated protein
hg19_v2_chr3_+_105085734_105085760	0.390262	AUGGCUU	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr5_-_36152031_36152063	0.37853	AUGGCUU	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chr12_+_57984965_57985059	0.376228	AUGGCUU	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr10_+_99185917_99185956	0.371038	AUGGCUU	ENST00000334828.5|PGAM1|ENSG00000171314.8|phosphoglycerate mutase 1 (brain)
hg19_v2_chr17_-_44896047_44896126	0.369342	AUGGCUU	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr11_-_108093329_108093375	0.35693	AUGGCUU	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr1_-_71546690_71546730	0.351522	AUGGCUU	ENST00000254821.6|ZRANB2|ENSG00000132485.8|zinc finger, RAN-binding domain containing 2
hg19_v2_chr15_-_100258029_100258029	0.350503	AUGGCUU	ENST00000378904.2|DKFZP779J2370|ENSG00000214397.2|DKFZP779J2370
hg19_v2_chr11_+_19138670_19138732	0.347578	AUGGCUU	ENST00000446113.2|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13 	ENST00000399351.3|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13
hg19_v2_chr7_+_99613195_99613206	0.338967	AUGGCUU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr3_+_9691117_9691207	0.333979	AUGGCUU	ENST00000353332.5|MTMR14|ENSG00000163719.14|myotubularin related protein 14 	ENST00000420925.1|MTMR14|ENSG00000163719.14|myotubularin related protein 14 	ENST00000296003.4|MTMR14|ENSG00000163719.14|myotubularin related protein 14 	ENST00000351233.5|MTMR14|ENSG00000163719.14|myotubularin related protein 14
hg19_v2_chr4_+_170541660_170541677	0.326113	AUGGCUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr3_-_171178157_171178225	0.321526	AUGGCUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr18_-_21166841_21166864	0.315255	AUGGCUU	ENST00000269228.5|NPC1|ENSG00000141458.8|Niemann-Pick disease, type C1
hg19_v2_chr1_-_243418344_243418356	0.315115	AUGGCUU	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr10_-_52383644_52383743	0.314662	AUGGCUU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr11_+_98891797_98891920	0.302402	AUGGCUU	ENST00000527185.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000528682.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000524871.1|CNTN5|ENSG00000149972.6|contactin 5
hg19_v2_chrX_+_54466829_54466859	0.296436	AUGGCUU	ENST00000375151.4|TSR2|ENSG00000158526.7|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
hg19_v2_chr2_+_198380289_198380305	0.294797	AUGGCUU	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr20_-_32031680_32031703	0.290354	AUGGCUU	ENST00000217381.2|SNTA1|ENSG00000101400.5|syntrophin, alpha 1
hg19_v2_chr16_-_80838195_80838228	0.287118	AUGGCUU	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr8_-_20161466_20161481	0.285873	AUGGCUU	ENST00000381569.1|LZTS1|ENSG00000061337.11|leucine zipper, putative tumor suppressor 1
hg19_v2_chr7_-_26578407_26578451	0.283044	AUGGCUU	ENST00000242109.3|KIAA0087|ENSG00000122548.3|KIAA0087
hg19_v2_chr22_+_41347363_41347399	0.276684	AUGGCUU	ENST00000216225.8|RBX1|ENSG00000100387.8|ring-box 1, E3 ubiquitin protein ligase
hg19_v2_chr17_+_72983674_72983768	0.275416	AUGGCUU	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr15_-_72410109_72410161	0.273526	AUGGCUU	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr4_+_128703295_128703496	0.269353	AUGGCUU	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr3_+_197687071_197687128	0.265361	AUGGCUU	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr17_-_66287257_66287276	0.264386	AUGGCUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr2_-_240322643_240322661	0.263703	AUGGCUU	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr19_+_10527449_10527619	0.26085	AUGGCUU	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr15_-_68498376_68498417	0.258308	AUGGCUU	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr4_-_39033963_39034047	0.252698	AUGGCUU	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr10_-_81205373_81205429	0.247699	AUGGCUU	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr15_+_77712993_77713081	0.234668	AUGGCUU	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr2_-_201936302_201936416	0.234639	AUGGCUU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr8_-_71316021_71316068	0.232772	AUGGCUU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr14_-_91526922_91527001	0.228543	AUGGCUU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr2_+_175199674_175199688	0.224958	AUGGCUU	ENST00000394967.2|SP9|ENSG00000217236.1|Sp9 transcription factor
hg19_v2_chr2_-_122407097_122407163	0.222983	AUGGCUU	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr17_+_57297807_57297923	0.220531	AUGGCUU	ENST00000284116.4|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581140.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581276.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v2_chr18_+_9475668_9475698	0.220291	AUGGCUU	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chrX_-_48776292_48776309	0.219854	AUGGCUU	ENST00000376509.4|PIM2|ENSG00000102096.9|pim-2 oncogene
hg19_v2_chr8_-_72268889_72268955	0.218488	AUGGCUU	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr9_-_15510989_15511017	0.217471	AUGGCUU	ENST00000380715.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380716.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380738.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380733.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr18_+_13218769_13218792	0.215743	AUGGCUU	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr6_+_163835669_163835693	0.212598	AUGGCUU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr13_+_31774073_31774153	0.212284	AUGGCUU	ENST00000343307.4|B3GALTL|ENSG00000187676.7|beta 1,3-galactosyltransferase-like
hg19_v2_chr14_-_75179774_75179818	0.211487	AUGGCUU	ENST00000555249.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000556202.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000338772.5|AC007956.1|ENSG00000214670.3|Full-length cDNA 5-PRIME end of clone CS0CAP004YO05 of Thymus of Homo sapiens (human); Uncharacterized protein  	ENST00000356357.4|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1
hg19_v2_chr19_-_46405861_46405886	0.211108	AUGGCUU	ENST00000322217.5|MYPOP|ENSG00000176182.5|Myb-related transcription factor, partner of profilin
hg19_v2_chr13_+_95254085_95254171	0.207848	AUGGCUU	ENST00000376958.4|GPR180|ENSG00000152749.7|G protein-coupled receptor 180
hg19_v2_chr16_+_22019404_22019604	0.200993	AUGGCUU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr22_+_29279552_29279586	0.19941	AUGGCUU	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr9_+_101867359_101867376	0.197033	AUGGCUU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr3_-_143567262_143567373	0.193266	AUGGCUU	ENST00000474151.1|SLC9A9|ENSG00000181804.10|solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 	ENST00000316549.6|SLC9A9|ENSG00000181804.10|solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
hg19_v2_chr12_-_54779511_54779577	0.190936	AUGGCUU	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr2_+_178257372_178257523	0.189092	AUGGCUU	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr12_-_111021110_111021142	0.186802	AUGGCUU	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chrX_-_24045303_24045303	0.186658	AUGGCUU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr17_-_48785216_48785291	0.18512	AUGGCUU	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr1_-_68962782_68962801	0.180589	AUGGCUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr16_+_71879861_71879927	0.176473	AUGGCUU	ENST00000427980.2|ATXN1L|ENSG00000224470.3|ataxin 1-like 	ENST00000568581.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast)
hg19_v2_chr14_+_74111578_74111730	0.169003	AUGGCUU	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr19_+_18263928_18264072	0.167363	AUGGCUU	ENST00000222254.8|PIK3R2|ENSG00000105647.10|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg19_v2_chr2_-_107503558_107503580	0.162207	AUGGCUU	ENST00000361686.4|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 	ENST00000409087.3|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v2_chr1_+_20208870_20209006	0.161444	AUGGCUU	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr5_+_112312416_112312440	0.15939	AUGGCUU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr1_+_65210772_65210840	0.157037	AUGGCUU	ENST00000371072.4|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2 	ENST00000294428.3|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2
hg19_v2_chr3_-_48723268_48723360	0.145467	AUGGCUU	ENST00000439518.1|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000416649.2|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000341520.4|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000294129.2|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain
hg19_v2_chr14_-_57735528_57735726	0.136358	AUGGCUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr12_+_105501487_105501562	0.135683	AUGGCUU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr19_-_12834739_12834825	0.133931	AUGGCUU	ENST00000589337.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000425528.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000441499.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000588216.1|TNPO2|ENSG00000105576.11|transportin 2
hg19_v2_chr2_-_180726232_180726275	0.132733	AUGGCUU	ENST00000410066.1|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr20_+_47538357_47538427	0.132721	AUGGCUU	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr14_-_55878538_55878576	0.132366	AUGGCUU	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr10_+_76871454_76871467	0.130301	AUGGCUU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr9_+_4985228_4985245	0.125054	AUGGCUU	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr7_+_5085452_5085553	0.123716	AUGGCUU	ENST00000353796.3|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger 	ENST00000396904.2|RBAK-RBAKDN|ENSG00000272968.1|RBAK-RBAKDN readthrough 	ENST00000396912.1|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger
hg19_v2_chr7_-_138666053_138666146	0.1172	AUGGCUU	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr22_+_40390930_40390994	0.113171	AUGGCUU	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr14_+_35591735_35591834	0.111512	AUGGCUU	ENST00000604948.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000605201.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000250377.7|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000321130.10|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000534898.4|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chr6_-_150185156_150185200	0.110769	AUGGCUU	ENST00000239367.2|LRP11|ENSG00000120256.5|low density lipoprotein receptor-related protein 11 	ENST00000367368.2|LRP11|ENSG00000120256.5|low density lipoprotein receptor-related protein 11
hg19_v2_chr3_-_24536253_24536328	0.106624	AUGGCUU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr9_+_108006880_108006943	0.105949	AUGGCUU	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr5_-_55529115_55529186	0.105661	AUGGCUU	ENST00000513241.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55 	ENST00000341048.4|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr8_+_28747884_28747938	0.100485	AUGGCUU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr4_+_78078304_78078406	0.100152	AUGGCUU	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr5_-_131132658_131132719	0.0988166	AUGGCUU	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr17_+_34900737_34900821	0.0984156	AUGGCUU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr9_-_32552551_32552576	0.0967219	AUGGCUU	ENST00000360538.2|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 	ENST00000379858.1|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v2_chr14_-_81687197_81687280	0.0966616	AUGGCUU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr11_-_22647350_22647396	0.095406	AUGGCUU	ENST00000327470.3|FANCF|ENSG00000183161.3|Fanconi anemia, complementation group F
hg19_v2_chr8_+_38758737_38758763	0.0911486	AUGGCUU	ENST00000521746.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 	ENST00000420274.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg19_v2_chr17_+_38219063_38219154	0.0906482	AUGGCUU	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr1_-_220445757_220445819	0.0896015	AUGGCUU	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr6_+_18155560_18155624	0.0886714	AUGGCUU	ENST00000546309.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000388870.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000397244.1|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B
hg19_v2_chr6_+_41755389_41755441	0.0823229	AUGGCUU	ENST00000398884.3|TOMM6|ENSG00000214736.3|translocase of outer mitochondrial membrane 6 homolog (yeast) 	ENST00000398881.3|TOMM6|ENSG00000214736.3|translocase of outer mitochondrial membrane 6 homolog (yeast)
hg19_v2_chr17_-_62340581_62340671	0.0809068	AUGGCUU	ENST00000258991.3|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000583738.1|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000584379.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr12_+_27485823_27485868	0.0802331	AUGGCUU	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr6_+_137143694_137143755	0.0792242	AUGGCUU	ENST00000367756.4|PEX7|ENSG00000112357.8|peroxisomal biogenesis factor 7 	ENST00000541292.1|PEX7|ENSG00000112357.8|peroxisomal biogenesis factor 7 	ENST00000318471.4|PEX7|ENSG00000112357.8|peroxisomal biogenesis factor 7
hg19_v2_chr2_+_68694678_68694734	0.0783268	AUGGCUU	ENST00000303795.4|APLF|ENSG00000169621.5|aprataxin and PNKP like factor
hg19_v2_chr3_-_107809816_107809885	0.0732096	AUGGCUU	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr6_+_134274322_134274342	0.072737	AUGGCUU	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr7_-_20826504_20826526	0.0707074	AUGGCUU	ENST00000418710.2|SP8|ENSG00000164651.12|Sp8 transcription factor 	ENST00000361443.4|SP8|ENSG00000164651.12|Sp8 transcription factor
hg19_v2_chr9_-_126030817_126030906	0.0699602	AUGGCUU	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr1_+_27719148_27719184	0.0670943	AUGGCUU	ENST00000374024.3|GPR3|ENSG00000181773.6|G protein-coupled receptor 3
hg19_v2_chr14_-_54908043_54908149	0.0666569	AUGGCUU	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr17_+_29421900_29421951	0.0662691	AUGGCUU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr2_+_32390925_32390941	0.0643031	AUGGCUU	ENST00000440718.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000379343.2|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000282587.5|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000435660.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000538303.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000357055.3|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000406369.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6
hg19_v2_chrX_-_53449593_53449677	0.063228	AUGGCUU	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr2_-_11484710_11484812	0.0606736	AUGGCUU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr7_+_12250886_12250933	0.0574617	AUGGCUU	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr10_+_102295616_102295713	0.0570035	AUGGCUU	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr15_+_32907691_32907772	0.0547827	AUGGCUU	ENST00000361627.3|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000567348.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000563864.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000543522.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A
hg19_v2_chr11_+_125496124_125496344	0.0529117	AUGGCUU	ENST00000533778.2|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000534070.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr8_-_104427313_104427413	0.0505962	AUGGCUU	ENST00000297578.4|SLC25A32|ENSG00000164933.7|solute carrier family 25 (mitochondrial folate carrier), member 32
hg19_v2_chr1_+_183605200_183605220	0.0488402	AUGGCUU	ENST00000304685.4|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr13_+_42622781_42622889	0.0461352	AUGGCUU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr8_-_12612962_12613049	0.0422957	AUGGCUU	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr9_+_2015335_2015374	0.0394011	AUGGCUU	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr14_-_45431091_45431175	0.0376512	AUGGCUU	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr2_+_24714729_24714927	0.0358579	AUGGCUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr1_-_205719295_205719404	0.0350706	AUGGCUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr1_-_24306798_24306828	0.0332229	AUGGCUU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr3_+_122513642_122513664	0.0330214	AUGGCUU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr3_-_141944398_141944465	0.0285911	AUGGCUU	ENST00000544571.1|GK5|ENSG00000175066.11|glycerol kinase 5 (putative) 	ENST00000392993.2|GK5|ENSG00000175066.11|glycerol kinase 5 (putative)
hg19_v2_chr4_-_149365827_149365870	0.026967	AUGGCUU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr7_-_558876_559046	0.0248983	AUGGCUU	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr12_-_29534074_29534127	0.0230002	AUGGCUU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr5_+_149109825_149109907	0.0216368	AUGGCUU	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr22_-_22307199_22307242	0.0209779	AUGGCUU	ENST00000397495.4|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000263212.5|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr1_+_224301787_224301836	0.0202257	AUGGCUU	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr12_+_64845660_64845702	0.0146759	AUGGCUU	ENST00000331710.5|TBK1|ENSG00000183735.5|TANK-binding kinase 1
hg19_v2_chr18_+_29671812_29671892	0.0137995	AUGGCUU	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr19_+_57862622_57862694	0.0129008	AUGGCUU	ENST00000391705.3|ZNF304|ENSG00000131845.10|zinc finger protein 304 	ENST00000443917.2|ZNF304|ENSG00000131845.10|zinc finger protein 304 	ENST00000598744.1|ZNF304|ENSG00000131845.10|zinc finger protein 304
hg19_v2_chr12_-_498620_498693	0.0124798	AUGGCUU	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr5_-_168006591_168006638	0.011977	AUGGCUU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr10_-_75008620_75008620	0.00934805	AUGGCUU	ENST00000372950.4|DNAJC9|ENSG00000213551.4|DnaJ (Hsp40) homolog, subfamily C, member 9
hg19_v2_chr21_-_43346790_43346823	0.00583205	AUGGCUU	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr8_-_23315190_23315235	0.00358195	AUGGCUU	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
hg19_v2_chr6_+_148663729_148663847	0.00115988	AUGGCUU	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
