hg19_v2_chr5_-_172756506_172756574	2.21391	CAGUAGU	ENST00000265087.4|STC2|ENSG00000113739.6|stanniocalcin 2
hg19_v2_chr15_+_41221536_41221591	2.08735	CAGUAGU	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr6_-_75915757_75915775	2.06477	CAGUAGU	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr3_+_61547585_61547585	1.97573	CAGUAGU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr7_-_19157248_19157295	1.95928	CAGUAGU	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr1_-_57045228_57045242	1.91409	CAGUAGU	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr7_+_116139424_116139444	1.86944	CAGUAGU	ENST00000222693.4|CAV2|ENSG00000105971.10|caveolin 2
hg19_v2_chr9_+_2621798_2621834	1.74886	CAGUAGU	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr2_+_46524537_46524553	1.73187	CAGUAGU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr15_-_56209306_56209344	1.61557	CAGUAGU	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr1_-_228135599_228135640	1.52232	CAGUAGU	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr2_+_36582857_36583069	1.49338	CAGUAGU	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr1_+_162602244_162602289	1.48774	CAGUAGU	ENST00000367922.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2 	ENST00000367921.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2
hg19_v2_chr11_+_101981169_101981210	1.46279	CAGUAGU	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr11_+_111473108_111473226	1.44187	CAGUAGU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr1_+_29563011_29563151	1.31882	CAGUAGU	ENST00000345512.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000373779.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000356870.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000323874.8|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000428026.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000460170.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U
hg19_v2_chr5_-_121413974_121413986	1.31652	CAGUAGU	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr4_+_55095264_55095390	1.31107	CAGUAGU	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chrX_+_118108571_118108589	1.26692	CAGUAGU	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr4_+_123747834_123747863	1.25984	CAGUAGU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr5_-_158526756_158526797	1.20834	CAGUAGU	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr14_-_52535712_52535753	1.19013	CAGUAGU	ENST00000216286.5|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen) 	ENST00000541773.1|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen)
hg19_v2_chr12_-_102874416_102874425	1.18636	CAGUAGU	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr12_-_16761007_16761080	1.18099	CAGUAGU	ENST00000354662.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2) 	ENST00000441439.2|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr3_-_24536253_24536328	1.16559	CAGUAGU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr1_+_61547894_61547980	1.10971	CAGUAGU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr3_-_98620500_98620547	1.10501	CAGUAGU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chrX_-_8700171_8700227	1.10442	CAGUAGU	ENST00000262648.3|KAL1|ENSG00000011201.6|Kallmann syndrome 1 sequence
hg19_v2_chr6_-_139695757_139695795	1.10232	CAGUAGU	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr4_-_129208940_129208976	1.08163	CAGUAGU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr11_+_12695944_12695989	1.02117	CAGUAGU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr12_-_80084862_80084884	1.01016	CAGUAGU	ENST00000328827.4|PAWR|ENSG00000177425.6|PRKC, apoptosis, WT1, regulator
hg19_v2_chr7_-_135433534_135433594	1.0052	CAGUAGU	ENST00000338588.3|FAM180A|ENSG00000189320.4|family with sequence similarity 180, member A
hg19_v2_chr6_+_1312675_1312701	0.996819	CAGUAGU	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr11_+_832944_832994	0.981319	CAGUAGU	ENST00000322008.4|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000397421.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000529810.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000526693.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000525333.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000524748.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group) 	ENST00000527341.1|CD151|ENSG00000177697.13|CD151 molecule (Raph blood group)
hg19_v2_chr1_-_94079648_94079671	0.961448	CAGUAGU	ENST00000370247.3|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr11_-_110583451_110583451	0.90317	CAGUAGU	ENST00000260283.4|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20 	ENST00000528829.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr10_+_102106829_102106881	0.865147	CAGUAGU	ENST00000370355.2|SCD|ENSG00000099194.5|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v2_chr5_+_137801160_137801179	0.821982	CAGUAGU	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr10_+_74033672_74033688	0.8215	CAGUAGU	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr13_-_76056250_76056280	0.818457	CAGUAGU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr15_+_84322827_84322861	0.810865	CAGUAGU	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr10_+_5454505_5454540	0.794044	CAGUAGU	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr13_-_86373536_86373623	0.785888	CAGUAGU	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr6_+_89790490_89790506	0.785831	CAGUAGU	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr15_-_77363513_77363570	0.773447	CAGUAGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr11_+_120207787_120207962	0.769822	CAGUAGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr14_-_35182994_35183034	0.761904	CAGUAGU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr17_-_48546232_48546267	0.734452	CAGUAGU	ENST00000258969.4|CHAD|ENSG00000136457.5|chondroadherin
hg19_v2_chr7_-_27219632_27219660	0.72004	CAGUAGU	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr4_-_73434498_73434516	0.711956	CAGUAGU	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr10_-_13570533_13570533	0.673395	CAGUAGU	ENST00000396900.2|BEND7|ENSG00000165626.12|BEN domain containing 7 	ENST00000396898.2|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr1_+_165796753_165796776	0.663376	CAGUAGU	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr10_+_72238517_72238595	0.636143	CAGUAGU	ENST00000263563.6|PALD1|ENSG00000107719.8|phosphatase domain containing, paladin 1
hg19_v2_chr12_+_19592602_19592648	0.633283	CAGUAGU	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr10_-_15762124_15762149	0.627847	CAGUAGU	ENST00000378076.3|ITGA8|ENSG00000077943.7|integrin, alpha 8
hg19_v2_chr5_+_52083730_52083821	0.619087	CAGUAGU	ENST00000282588.6|ITGA1|ENSG00000213949.4|integrin, alpha 1 	ENST00000274311.2|PELO|ENSG00000152684.10|pelota homolog (Drosophila)
hg19_v2_chr10_+_31608054_31608156	0.618652	CAGUAGU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr15_-_49447835_49447858	0.615796	CAGUAGU	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr12_-_77272765_77272840	0.596397	CAGUAGU	ENST00000547435.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000552330.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000546966.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000311083.5|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2
hg19_v2_chr11_-_44331679_44331716	0.590017	CAGUAGU	ENST00000329255.3|ALX4|ENSG00000052850.5|ALX homeobox 4
hg19_v2_chr2_-_216300784_216300895	0.583515	CAGUAGU	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr2_+_159825143_159825190	0.582046	CAGUAGU	ENST00000454300.1|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENST00000263635.6|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
hg19_v2_chr11_+_33278811_33279133	0.565065	CAGUAGU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr7_-_129592700_129592828	0.54833	CAGUAGU	ENST00000472396.1|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H 	ENST00000355621.3|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H
hg19_v2_chr7_-_27205136_27205164	0.547507	CAGUAGU	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr10_+_115803650_115803806	0.532825	CAGUAGU	ENST00000369295.2|ADRB1|ENSG00000043591.4|adrenoceptor beta 1
hg19_v2_chr2_-_47168906_47168994	0.510022	CAGUAGU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr12_-_31479045_31479074	0.460999	CAGUAGU	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr6_+_47445467_47445536	0.452568	CAGUAGU	ENST00000359314.5|CD2AP|ENSG00000198087.7|CD2-associated protein
hg19_v2_chr3_+_110790590_110790603	0.449961	CAGUAGU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr5_-_16936340_16936418	0.448412	CAGUAGU	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr2_+_148602058_148602185	0.447661	CAGUAGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr4_-_74124502_74124523	0.434587	CAGUAGU	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr12_-_120687948_120687971	0.433743	CAGUAGU	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr6_+_7107999_7108054	0.417065	CAGUAGU	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr3_-_11762202_11762226	0.415485	CAGUAGU	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr1_+_184356188_184356200	0.408357	CAGUAGU	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr19_+_41222998_41223057	0.406084	CAGUAGU	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr5_-_148930960_148931013	0.384615	CAGUAGU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr12_-_56652111_56652183	0.381605	CAGUAGU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chrX_-_77150985_77151090	0.380006	CAGUAGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr12_+_53774423_53774658	0.374434	CAGUAGU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr5_-_179780312_179780387	0.374237	CAGUAGU	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr15_-_37390482_37390572	0.373351	CAGUAGU	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr21_-_36260980_36261011	0.364731	CAGUAGU	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chrX_+_16804544_16804613	0.360356	CAGUAGU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr8_-_42397037_42397121	0.355068	CAGUAGU	ENST00000342228.3|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr15_+_41523335_41523350	0.344712	CAGUAGU	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr20_-_14318248_14318264	0.344465	CAGUAGU	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr5_+_129240151_129240182	0.331812	CAGUAGU	ENST00000305031.4|CHSY3|ENSG00000198108.3|chondroitin sulfate synthase 3
hg19_v2_chrX_+_119495934_119495997	0.330873	CAGUAGU	ENST00000218008.3|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide 	ENST00000361319.3|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide 	ENST00000539306.1|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg19_v2_chr3_+_152017181_152017229	0.330594	CAGUAGU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr5_-_77590480_77590579	0.32877	CAGUAGU	ENST00000519295.1|AP3B1|ENSG00000132842.9|adaptor-related protein complex 3, beta 1 subunit 	ENST00000255194.6|AP3B1|ENSG00000132842.9|adaptor-related protein complex 3, beta 1 subunit
hg19_v2_chr6_+_35182176_35182196	0.323283	CAGUAGU	ENST00000394681.1|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3 	ENST00000274938.7|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3
hg19_v2_chrX_+_76709648_76709648	0.304395	CAGUAGU	ENST00000439435.1|FGF16|ENSG00000196468.5|fibroblast growth factor 16
hg19_v2_chr9_-_107690420_107690518	0.301427	CAGUAGU	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr2_-_158485387_158485517	0.295557	CAGUAGU	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr14_+_23067146_23067160	0.288745	CAGUAGU	ENST00000428304.2|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4
hg19_v2_chr2_-_204400113_204400149	0.283289	CAGUAGU	ENST00000319170.5|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr10_+_112257596_112257634	0.28245	CAGUAGU	ENST00000369583.3|DUSP5|ENSG00000138166.5|dual specificity phosphatase 5
hg19_v2_chr7_-_75988321_75988348	0.27096	CAGUAGU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr6_-_24721054_24721074	0.268961	CAGUAGU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr15_+_49715293_49715448	0.264394	CAGUAGU	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr13_+_58206655_58206655	0.250024	CAGUAGU	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr11_+_129939779_129939801	0.245339	CAGUAGU	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chr6_+_53659746_53659817	0.243984	CAGUAGU	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr15_-_61521495_61521518	0.237721	CAGUAGU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr8_-_66754172_66754201	0.233864	CAGUAGU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr7_+_128379346_128379447	0.225204	CAGUAGU	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr1_+_15943995_15944014	0.21222	CAGUAGU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr3_+_38206975_38207101	0.208872	CAGUAGU	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr6_+_10556215_10556240	0.208496	CAGUAGU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr1_+_2985760_2985775	0.205924	CAGUAGU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr2_+_85198216_85198305	0.205443	CAGUAGU	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr19_+_1407517_1407612	0.200765	CAGUAGU	ENST00000336761.6|DAZAP1|ENSG00000071626.12|DAZ associated protein 1 	ENST00000233078.4|DAZAP1|ENSG00000071626.12|DAZ associated protein 1
hg19_v2_chr5_+_75699040_75699090	0.190796	CAGUAGU	ENST00000274364.6|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr1_-_177939041_177939053	0.187958	CAGUAGU	ENST00000308284.6|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr14_-_27066636_27066701	0.179818	CAGUAGU	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr17_+_36861735_36861795	0.175112	CAGUAGU	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chrX_+_40944871_40944888	0.168438	CAGUAGU	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr17_+_5185552_5185595	0.167752	CAGUAGU	ENST00000262477.6|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000408982.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000575991.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000537505.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000546142.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1
hg19_v2_chr2_+_173292301_173292332	0.165054	CAGUAGU	ENST00000264106.6|ITGA6|ENSG00000091409.10|integrin, alpha 6 	ENST00000375221.2|ITGA6|ENSG00000091409.10|integrin, alpha 6 	ENST00000343713.4|ITGA6|ENSG00000091409.10|integrin, alpha 6
hg19_v2_chr4_-_39979576_39979588	0.164136	CAGUAGU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr4_-_76957214_76957350	0.160608	CAGUAGU	ENST00000306621.3|CXCL11|ENSG00000169248.8|chemokine (C-X-C motif) ligand 11
hg19_v2_chr7_-_83824169_83824217	0.15777	CAGUAGU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr17_-_7382834_7382855	0.157076	CAGUAGU	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr1_-_184723942_184724047	0.156275	CAGUAGU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr13_+_48877895_48877929	0.152787	CAGUAGU	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr3_-_105587879_105587892	0.152571	CAGUAGU	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr1_-_93645818_93645918	0.146394	CAGUAGU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr16_+_81348528_81348578	0.145136	CAGUAGU	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr19_+_4969116_4969143	0.144138	CAGUAGU	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr2_+_138721850_138721890	0.142249	CAGUAGU	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr8_+_37553261_37553282	0.142127	CAGUAGU	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr1_-_29450399_29450447	0.14077	CAGUAGU	ENST00000521452.1|TMEM200B|ENSG00000253304.1|transmembrane protein 200B
hg19_v2_chrX_+_78003204_78003248	0.140428	CAGUAGU	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr5_-_100238956_100238994	0.138294	CAGUAGU	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr16_+_58549378_58549392	0.127655	CAGUAGU	ENST00000310682.2|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000394266.4|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000219315.4|SETD6|ENSG00000103037.7|SET domain containing 6
hg19_v2_chr17_-_1303462_1303672	0.117734	CAGUAGU	ENST00000573026.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000575977.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000571732.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000264335.8|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
hg19_v2_chr7_-_105752651_105752777	0.115877	CAGUAGU	ENST00000470347.1|SYPL1|ENSG00000008282.3|synaptophysin-like 1 	ENST00000455385.2|SYPL1|ENSG00000008282.3|synaptophysin-like 1
hg19_v2_chr3_+_122513642_122513664	0.114634	CAGUAGU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr3_-_52931557_52931623	0.113541	CAGUAGU	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr8_+_81397876_81397902	0.111233	CAGUAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr3_-_185655795_185655924	0.108407	CAGUAGU	ENST00000342294.4|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila) 	ENST00000382191.4|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila) 	ENST00000453386.2|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila)
hg19_v2_chr4_-_76598296_76598318	0.107567	CAGUAGU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr1_+_87170247_87170276	0.107116	CAGUAGU	ENST00000370558.4|SH3GLB1|ENSG00000097033.10|SH3-domain GRB2-like endophilin B1
hg19_v2_chr15_+_83478370_83478426	0.107075	CAGUAGU	ENST00000286760.4|WHAMM|ENSG00000156232.6|WAS protein homolog associated with actin, golgi membranes and microtubules
hg19_v2_chr4_+_148538517_148538592	0.104044	CAGUAGU	ENST00000296582.3|TMEM184C|ENSG00000164168.3|transmembrane protein 184C 	ENST00000508208.1|TMEM184C|ENSG00000164168.3|transmembrane protein 184C
hg19_v2_chr5_+_173315283_173315335	0.0998713	CAGUAGU	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr10_+_20105157_20105184	0.0985358	CAGUAGU	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr1_-_46152174_46152302	0.0981648	CAGUAGU	ENST00000290795.3|GPBP1L1|ENSG00000159592.6|GC-rich promoter binding protein 1-like 1 	ENST00000355105.3|GPBP1L1|ENSG00000159592.6|GC-rich promoter binding protein 1-like 1
hg19_v2_chr12_-_57030115_57030177	0.0955812	CAGUAGU	ENST00000379441.3|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A 	ENST00000179765.5|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A 	ENST00000551812.1|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A
hg19_v2_chrX_+_107683096_107683121	0.0952808	CAGUAGU	ENST00000328300.6|COL4A5|ENSG00000188153.8|collagen, type IV, alpha 5 	ENST00000361603.2|COL4A5|ENSG00000188153.8|collagen, type IV, alpha 5
hg19_v2_chr15_+_43425672_43425733	0.0936605	CAGUAGU	ENST00000260403.2|TMEM62|ENSG00000137842.2|transmembrane protein 62
hg19_v2_chr1_+_65613217_65613331	0.0923903	CAGUAGU	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr14_+_75745477_75745680	0.0900135	CAGUAGU	ENST00000303562.4|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554617.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554212.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000535987.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000555242.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr2_+_45878790_45878913	0.0890762	CAGUAGU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr20_+_33814457_33814506	0.0884101	CAGUAGU	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr7_-_95064264_95064510	0.0845988	CAGUAGU	ENST00000536183.1|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000433091.2|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000222572.3|PON2|ENSG00000105854.8|paraoxonase 2
hg19_v2_chr8_+_26149007_26149061	0.0828192	CAGUAGU	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr3_-_167813672_167813763	0.082292	CAGUAGU	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr8_+_125551338_125551425	0.0811328	CAGUAGU	ENST00000276689.3|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000518008.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000522532.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000517367.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
hg19_v2_chr16_-_1464688_1464752	0.0797511	CAGUAGU	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr2_+_42396472_42396563	0.0777088	CAGUAGU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr1_-_52344471_52344481	0.0707823	CAGUAGU	ENST00000352171.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase) 	ENST00000354831.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr9_+_125703282_125703337	0.0694998	CAGUAGU	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr3_+_37284668_37284771	0.0618484	CAGUAGU	ENST00000361924.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000444882.1|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000356847.4|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000450863.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000429018.1|GOLGA4|ENSG00000144674.12|golgin A4
hg19_v2_chr18_+_32073253_32073339	0.0540378	CAGUAGU	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr1_+_167190066_167190156	0.0527827	CAGUAGU	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr2_-_164592497_164592573	0.0525279	CAGUAGU	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr14_-_64010046_64010107	0.0462746	CAGUAGU	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr3_+_180630090_180630311	0.044712	CAGUAGU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chrX_+_117861535_117861592	0.0384198	CAGUAGU	ENST00000371666.3|IL13RA1|ENSG00000131724.6|interleukin 13 receptor, alpha 1 	ENST00000371642.1|IL13RA1|ENSG00000131724.6|interleukin 13 receptor, alpha 1
hg19_v2_chr20_+_35201857_35201891	0.0372294	CAGUAGU	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr9_+_33817461_33817565	0.0324611	CAGUAGU	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr7_-_76829125_76829143	0.0310681	CAGUAGU	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr1_-_19578003_19578046	0.0286071	CAGUAGU	ENST00000375199.3|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1 	ENST00000375208.3|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1 	ENST00000356068.2|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1 	ENST00000477853.1|EMC1|ENSG00000127463.9|ER membrane protein complex subunit 1
hg19_v2_chr5_+_139493665_139493718	0.0278003	CAGUAGU	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr21_+_46494466_46494543	0.0246906	CAGUAGU	ENST00000539173.1|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1 	ENST00000389863.4|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1 	ENST00000348831.4|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1 	ENST00000437626.1|ADARB1|ENSG00000197381.11|adenosine deaminase, RNA-specific, B1
hg19_v2_chr14_+_103058948_103059005	0.0231713	CAGUAGU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr2_-_73053126_73053184	0.0222244	CAGUAGU	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr5_+_149109825_149109907	0.0201309	CAGUAGU	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr8_+_67579807_67579887	0.0158362	CAGUAGU	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr2_+_110371905_110371950	0.0106813	CAGUAGU	ENST00000356454.3|SOWAHC|ENSG00000198142.3|sosondowah ankyrin repeat domain family member C
hg19_v2_chr1_-_235491462_235491534	0.0091186	CAGUAGU	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr9_+_129567282_129567353	0.00623689	CAGUAGU	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr8_+_123793633_123793703	0.00619572	CAGUAGU	ENST00000314393.4|ZHX2|ENSG00000178764.6|zinc fingers and homeoboxes 2
hg19_v2_chr6_+_26365443_26365503	0.00282368	CAGUAGU	ENST00000527422.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000356386.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396934.3|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000377708.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396948.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000508906.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2
hg19_v2_chr1_-_70820357_70820435	0.00101273	CAGUAGU	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr8_-_124286735_124286773	0.00068149	CAGUAGU	ENST00000395571.3|ZHX1|ENSG00000165156.10|zinc fingers and homeoboxes 1
hg19_v2_chr17_+_38219063_38219154	0.000525384	CAGUAGU	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
