hg19_v2_chr15_+_85359911_85359911	0.525193	CCAGCAU	ENST00000258888.5|ALPK3|ENSG00000136383.6|alpha-kinase 3
hg19_v2_chr16_-_51185149_51185160	0.513854	CCAGCAU	ENST00000566102.1|SALL1|ENSG00000103449.7|spalt-like transcription factor 1 	ENST00000541611.1|SALL1|ENSG00000103449.7|spalt-like transcription factor 1
hg19_v2_chr17_+_43971643_43971748	0.49119	CCAGCAU	ENST00000344290.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000262410.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000351559.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000340799.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000535772.1|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000347967.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau
hg19_v2_chr12_-_54982420_54982461	0.489734	CCAGCAU	ENST00000257905.8|PPP1R1A|ENSG00000135447.12|protein phosphatase 1, regulatory (inhibitor) subunit 1A
hg19_v2_chr5_-_45696253_45696427	0.368513	CCAGCAU	ENST00000303230.4|HCN1|ENSG00000164588.4|hyperpolarization activated cyclic nucleotide-gated potassium channel 1
hg19_v2_chr22_-_44258360_44258402	0.349075	CCAGCAU	ENST00000330884.4|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1 	ENST00000249130.5|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr3_-_179754706_179754732	0.294409	CCAGCAU	ENST00000465751.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like 	ENST00000467460.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr4_-_168155730_168155740	0.289043	CCAGCAU	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr6_+_16238786_16238854	0.281713	CCAGCAU	ENST00000259727.4|GMPR|ENSG00000137198.5|guanosine monophosphate reductase
hg19_v2_chr10_-_91403625_91403649	0.274465	CCAGCAU	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr1_+_109792641_109792641	0.261406	CCAGCAU	ENST00000271332.3|CELSR2|ENSG00000143126.7|cadherin, EGF LAG seven-pass G-type receptor 2
hg19_v2_chr3_+_49591881_49591940	0.228695	CCAGCAU	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr1_-_40137710_40137824	0.226923	CCAGCAU	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr6_-_116601044_116601106	0.225526	CCAGCAU	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr1_+_61547894_61547980	0.213872	CCAGCAU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr12_-_113574028_113574051	0.212813	CCAGCAU	ENST00000546530.1|RASAL1|ENSG00000111344.7|RAS protein activator like 1 (GAP1 like) 	ENST00000261729.5|RASAL1|ENSG00000111344.7|RAS protein activator like 1 (GAP1 like)
hg19_v2_chr5_+_143584814_143584840	0.208455	CCAGCAU	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr5_-_36152031_36152063	0.197991	CCAGCAU	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chrX_-_107975917_107975917	0.19151	CCAGCAU	ENST00000563887.1|RP6-24A23.6|ENSG00000260548.1|Uncharacterized protein
hg19_v2_chr11_+_113930291_113930339	0.179423	CCAGCAU	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr11_-_129062093_129062184	0.177506	CCAGCAU	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr8_-_124553437_124553453	0.177154	CCAGCAU	ENST00000517956.1|FBXO32|ENSG00000156804.3|F-box protein 32 	ENST00000443022.2|FBXO32|ENSG00000156804.3|F-box protein 32
hg19_v2_chrX_+_49126294_49126337	0.172022	CCAGCAU	ENST00000466508.1|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F 	ENST00000438316.1|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F 	ENST00000055335.6|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F 	ENST00000495799.1|PPP1R3F|ENSG00000049769.8|protein phosphatase 1, regulatory subunit 3F
hg19_v2_chr2_-_183731882_183731896	0.170521	CCAGCAU	ENST00000295113.4|FRZB|ENSG00000162998.4|frizzled-related protein
hg19_v2_chr20_-_41818373_41818527	0.169522	CCAGCAU	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr2_-_2334888_2335053	0.167574	CCAGCAU	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr6_+_72596604_72596727	0.16455	CCAGCAU	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr6_-_2634820_2634844	0.159075	CCAGCAU	ENST00000296847.3|C6orf195|ENSG00000164385.5|chromosome 6 open reading frame 195
hg19_v2_chr1_+_70034081_70034133	0.156757	CCAGCAU	ENST00000310961.5|LRRC7|ENSG00000033122.14|leucine rich repeat containing 7 	ENST00000370958.1|LRRC7|ENSG00000033122.14|leucine rich repeat containing 7
hg19_v2_chr2_-_152955537_152955593	0.156132	CCAGCAU	ENST00000201943.5|CACNB4|ENSG00000182389.14|calcium channel, voltage-dependent, beta 4 subunit 	ENST00000539935.1|CACNB4|ENSG00000182389.14|calcium channel, voltage-dependent, beta 4 subunit
hg19_v2_chr9_+_140032842_140032842	0.152638	CCAGCAU	ENST00000371561.3|GRIN1|ENSG00000176884.10|glutamate receptor, ionotropic, N-methyl D-aspartate 1 	ENST00000315048.3|GRIN1|ENSG00000176884.10|glutamate receptor, ionotropic, N-methyl D-aspartate 1
hg19_v2_chr17_+_11144580_11144740	0.151098	CCAGCAU	ENST00000441885.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000432116.3|SHISA6|ENSG00000188803.10|shisa family member 6 	ENST00000409168.3|SHISA6|ENSG00000188803.10|shisa family member 6
hg19_v2_chr6_-_146135880_146135952	0.151065	CCAGCAU	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr1_-_51425902_51425976	0.14911	CCAGCAU	ENST00000396153.2|FAF1|ENSG00000185104.15|Fas (TNFRSF6) associated factor 1
hg19_v2_chr5_+_43602750_43602838	0.148009	CCAGCAU	ENST00000505678.2|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase 	ENST00000512422.1|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase 	ENST00000264663.5|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase
hg19_v2_chr9_-_111929560_111929571	0.144394	CCAGCAU	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr5_+_175223313_175223349	0.143082	CCAGCAU	ENST00000359546.4|CPLX2|ENSG00000145920.10|complexin 2
hg19_v2_chr2_-_166930131_166930149	0.140603	CCAGCAU	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr9_+_124413873_124413969	0.136165	CCAGCAU	ENST00000408936.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr1_+_164528866_164528877	0.136106	CCAGCAU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr5_+_134240800_134240842	0.133822	CCAGCAU	ENST00000512783.1|PCBD2|ENSG00000132570.10|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
hg19_v2_chr3_-_9291063_9291136	0.131747	CCAGCAU	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr4_-_142053952_142053996	0.129868	CCAGCAU	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr1_+_229440129_229440129	0.129616	CCAGCAU	ENST00000366688.3|SPHAR|ENSG00000213029.2|S-phase response (cyclin related)
hg19_v2_chr12_+_113229737_113229821	0.128976	CCAGCAU	ENST00000551052.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse) 	ENST00000415485.3|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr10_-_118502070_118502085	0.122595	CCAGCAU	ENST00000369209.3|HSPA12A|ENSG00000165868.8|heat shock 70kDa protein 12A
hg19_v2_chr9_+_129567282_129567353	0.119626	CCAGCAU	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr6_+_37787262_37787291	0.113457	CCAGCAU	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr11_+_111473108_111473226	0.108224	CCAGCAU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr17_-_10741762_10741762	0.0973994	CCAGCAU	ENST00000580256.2|PIRT|ENSG00000233670.6|phosphoinositide-interacting regulator of transient receptor potential channels
hg19_v2_chr3_+_100428268_100428287	0.0956311	CCAGCAU	ENST00000240851.4|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr15_+_73976545_73976624	0.0949847	CCAGCAU	ENST00000318443.5|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000537340.2|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000318424.5|CD276|ENSG00000103855.13|CD276 molecule
hg19_v2_chr4_+_48018781_48018816	0.094961	CCAGCAU	ENST00000295461.5|NIPAL1|ENSG00000163293.7|NIPA-like domain containing 1
hg19_v2_chr1_-_51763661_51763672	0.0931164	CCAGCAU	ENST00000530004.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr17_+_46125707_46125746	0.0890075	CCAGCAU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr3_-_134093395_134093436	0.087605	CCAGCAU	ENST00000249883.5|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr14_+_65171099_65171210	0.0871497	CCAGCAU	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr10_-_75634260_75634321	0.0854367	CCAGCAU	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr12_-_10875831_10876025	0.0794118	CCAGCAU	ENST00000279550.7|YBX3|ENSG00000060138.8|Y box binding protein 3 	ENST00000228251.4|YBX3|ENSG00000060138.8|Y box binding protein 3
hg19_v2_chr11_+_4116005_4116047	0.0780883	CCAGCAU	ENST00000300738.5|RRM1|ENSG00000167325.10|ribonucleotide reductase M1
hg19_v2_chr3_-_28390581_28390618	0.0774366	CCAGCAU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr19_-_56092187_56092248	0.076364	CCAGCAU	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr10_-_105615164_105615323	0.0757966	CCAGCAU	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr7_-_14942944_14942997	0.0750747	CCAGCAU	ENST00000403951.2|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr4_+_41992489_41992561	0.073379	CCAGCAU	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr8_+_21915368_21915399	0.0726584	CCAGCAU	ENST00000265800.5|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000517418.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr18_-_31803435_31803515	0.0713324	CCAGCAU	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr2_-_220094294_220094439	0.0712251	CCAGCAU	ENST00000436856.1|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000428226.1|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000409422.1|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000431715.1|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000457841.1|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000439812.1|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000361242.4|ATG9A|ENSG00000198925.6|autophagy related 9A 	ENST00000396761.2|ATG9A|ENSG00000198925.6|autophagy related 9A
hg19_v2_chr7_-_87849340_87849395	0.0700857	CCAGCAU	ENST00000419179.1|SRI|ENSG00000075142.9|sorcin 	ENST00000265729.2|SRI|ENSG00000075142.9|sorcin
hg19_v2_chr17_-_40950698_40950737	0.0695671	CCAGCAU	ENST00000328434.7|COA3|ENSG00000183978.7|cytochrome c oxidase assembly factor 3
hg19_v2_chr11_-_73309228_73309257	0.0694969	CCAGCAU	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr8_+_77593448_77593471	0.0678575	CCAGCAU	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr5_+_140560980_140560980	0.0678049	CCAGCAU	ENST00000361016.2|PCDHB16|ENSG00000196963.2|protocadherin beta 16
hg19_v2_chr2_+_210444142_210444194	0.0652246	CCAGCAU	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr10_-_94003003_94003013	0.0651081	CCAGCAU	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr2_-_69870835_69870853	0.0627224	CCAGCAU	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr5_+_141488070_141488094	0.0610494	CCAGCAU	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr2_-_152684977_152685021	0.0608202	CCAGCAU	ENST00000428992.2|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A 	ENST00000295087.8|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A
hg19_v2_chr1_-_205091115_205091148	0.0592395	CCAGCAU	ENST00000264515.6|RBBP5|ENSG00000117222.9|retinoblastoma binding protein 5 	ENST00000367164.1|RBBP5|ENSG00000117222.9|retinoblastoma binding protein 5
hg19_v2_chr11_-_115375107_115375283	0.058357	CCAGCAU	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr4_-_149365827_149365870	0.0580644	CCAGCAU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr8_-_98290087_98290197	0.0565891	CCAGCAU	ENST00000322128.3|TSPYL5|ENSG00000180543.3|TSPY-like 5
hg19_v2_chrX_-_152864632_152864642	0.0551802	CCAGCAU	ENST00000406277.2|FAM58A|ENSG00000147382.14|family with sequence similarity 58, member A
hg19_v2_chr4_-_153457197_153457268	0.0547283	CCAGCAU	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr1_-_154531095_154531119	0.052833	CCAGCAU	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr7_-_156803329_156803362	0.0525566	CCAGCAU	ENST00000252971.6|MNX1|ENSG00000130675.10|motor neuron and pancreas homeobox 1
hg19_v2_chr9_+_35749203_35749350	0.0520848	CCAGCAU	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chr1_+_244214577_244214593	0.0520565	CCAGCAU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr22_-_44894178_44894203	0.0512732	CCAGCAU	ENST00000341255.3|LDOC1L|ENSG00000188636.3|leucine zipper, down-regulated in cancer 1-like
hg19_v2_chr7_+_139026057_139026130	0.0509888	CCAGCAU	ENST00000541515.3|LUC7L2|ENSG00000269955.2|LUC7-like 2 (S. cerevisiae)
hg19_v2_chr18_-_72921303_72921339	0.0503479	CCAGCAU	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr14_+_23775971_23776000	0.0498103	CCAGCAU	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr1_+_201798269_201798339	0.0484334	CCAGCAU	ENST00000361565.4|IPO9|ENSG00000198700.5|importin 9
hg19_v2_chr16_-_69419871_69419927	0.0471286	CCAGCAU	ENST00000603068.1|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000254942.3|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000567296.2|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2
hg19_v2_chr2_-_101767715_101767881	0.0462768	CCAGCAU	ENST00000376840.4|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain) 	ENST00000409318.1|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain)
hg19_v2_chr14_-_36989427_36989442	0.0457851	CCAGCAU	ENST00000354822.5|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr19_+_45754505_45754577	0.0424189	CCAGCAU	ENST00000262891.4|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4 	ENST00000300843.4|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4
hg19_v2_chr12_-_4647606_4647681	0.0410941	CCAGCAU	ENST00000261250.3|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4 	ENST00000541014.1|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4 	ENST00000545746.1|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4 	ENST00000542080.1|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4
hg19_v2_chr19_-_38210622_38210691	0.040842	CCAGCAU	ENST00000591664.1|ZNF607|ENSG00000198182.8|zinc finger protein 607 	ENST00000355202.4|ZNF607|ENSG00000198182.8|zinc finger protein 607
hg19_v2_chr5_+_158690089_158690089	0.0392424	CCAGCAU	ENST00000296786.6|UBLCP1|ENSG00000164332.6|ubiquitin-like domain containing CTD phosphatase 1
hg19_v2_chr1_+_26438289_26438352	0.0384513	CCAGCAU	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr9_-_14693417_14693469	0.0381079	CCAGCAU	ENST00000380916.4|ZDHHC21|ENSG00000175893.7|zinc finger, DHHC-type containing 21
hg19_v2_chr3_-_71774516_71774587	0.0373574	CCAGCAU	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr9_-_123964114_123964210	0.036084	CCAGCAU	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr6_-_36304660_36304666	0.0339625	CCAGCAU	ENST00000437635.2|C6orf222|ENSG00000189325.6|chromosome 6 open reading frame 222
hg19_v2_chr11_-_10562710_10562782	0.033876	CCAGCAU	ENST00000528665.1|RNF141|ENSG00000110315.2|ring finger protein 141 	ENST00000265981.2|RNF141|ENSG00000110315.2|ring finger protein 141
hg19_v2_chr1_-_78148324_78148365	0.0334717	CCAGCAU	ENST00000370801.3|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3 	ENST00000433749.1|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3
hg19_v2_chr17_-_4269768_4269835	0.0327039	CCAGCAU	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr10_+_102295616_102295713	0.0326514	CCAGCAU	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr1_+_113010056_113010056	0.0313234	CCAGCAU	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr20_+_47538357_47538427	0.0305253	CCAGCAU	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr1_+_153606513_153606525	0.0287777	CCAGCAU	ENST00000368694.3|CHTOP|ENSG00000160679.8|chromatin target of PRMT1
hg19_v2_chr10_-_100995540_100995559	0.0283175	CCAGCAU	ENST00000370546.1|HPSE2|ENSG00000172987.8|heparanase 2 	ENST00000404542.1|HPSE2|ENSG00000172987.8|heparanase 2
hg19_v2_chr2_+_48010221_48010307	0.0277959	CCAGCAU	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr2_+_113239710_113239753	0.0276644	CCAGCAU	ENST00000233336.6|TTL|ENSG00000114999.7|tubulin tyrosine ligase
hg19_v2_chr3_-_142166904_142166916	0.027012	CCAGCAU	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr16_-_77468945_77469011	0.0253849	CCAGCAU	ENST00000282849.5|ADAMTS18|ENSG00000140873.11|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg19_v2_chr16_+_67063036_67063088	0.0252002	CCAGCAU	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr2_-_85555385_85555548	0.0250113	CCAGCAU	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr6_-_116575226_116575278	0.0248517	CCAGCAU	ENST00000420283.1|TSPYL4|ENSG00000187189.9|TSPY-like 4
hg19_v2_chr5_-_107006596_107006651	0.0243122	CCAGCAU	ENST00000333274.6|EFNA5|ENSG00000184349.8|ephrin-A5
hg19_v2_chr14_+_67826709_67826751	0.0242229	CCAGCAU	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr15_+_45422131_45422172	0.0226488	CCAGCAU	ENST00000321429.4|DUOX1|ENSG00000137857.13|dual oxidase 1
hg19_v2_chr9_+_125026882_125026952	0.0197276	CCAGCAU	ENST00000297908.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000373730.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000546115.1|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000344641.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor
hg19_v2_chr2_+_28974668_28974729	0.018416	CCAGCAU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr6_-_99963252_99963264	0.0182137	CCAGCAU	ENST00000392738.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000327681.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000472914.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr22_-_22221900_22221970	0.0179406	CCAGCAU	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr9_-_86153218_86153461	0.0157483	CCAGCAU	ENST00000304195.3|FRMD3|ENSG00000172159.11|FERM domain containing 3 	ENST00000376438.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr12_+_862089_862343	0.0157328	CCAGCAU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr10_-_70287231_70287290	0.0155451	CCAGCAU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr1_-_35658736_35658754	0.0148122	CCAGCAU	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr3_-_14166316_14166383	0.014718	CCAGCAU	ENST00000396914.3|CHCHD4|ENSG00000163528.8|coiled-coil-helix-coiled-coil-helix domain containing 4 	ENST00000295767.5|CHCHD4|ENSG00000163528.8|coiled-coil-helix-coiled-coil-helix domain containing 4
hg19_v2_chr5_+_63802109_63802139	0.0146496	CCAGCAU	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr8_+_120079478_120079499	0.0142848	CCAGCAU	ENST00000332843.2|COLEC10|ENSG00000184374.2|collectin sub-family member 10 (C-type lectin)
hg19_v2_chr3_+_183873098_183873230	0.0131165	CCAGCAU	ENST00000313143.3|DVL3|ENSG00000161202.13|dishevelled segment polarity protein 3
hg19_v2_chr14_-_76127519_76127543	0.0129398	CCAGCAU	ENST00000256319.6|C14orf1|ENSG00000133935.6|chromosome 14 open reading frame 1
hg19_v2_chr2_+_64681219_64681231	0.0110021	CCAGCAU	ENST00000238875.5|LGALSL|ENSG00000119862.8|lectin, galactoside-binding-like
hg19_v2_chr10_-_102279586_102279711	0.0108484	CCAGCAU	ENST00000370345.3|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000451524.1|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000370329.5|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae)
hg19_v2_chr2_-_85788605_85788632	0.00963735	CCAGCAU	ENST00000233838.4|GGCX|ENSG00000115486.7|gamma-glutamyl carboxylase
hg19_v2_chr3_+_29322803_29322850	0.00946344	CCAGCAU	ENST00000396583.3|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3 	ENST00000383767.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr7_+_74072011_74072119	0.009018	CCAGCAU	ENST00000324896.4|GTF2I|ENSG00000077809.8|general transcription factor IIi 	ENST00000353920.4|GTF2I|ENSG00000077809.8|general transcription factor IIi 	ENST00000346152.4|GTF2I|ENSG00000077809.8|general transcription factor IIi 	ENST00000416070.1|GTF2I|ENSG00000077809.8|general transcription factor IIi
hg19_v2_chr10_+_105726862_105726986	0.00661439	CCAGCAU	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr8_+_6565854_6565942	0.00645157	CCAGCAU	ENST00000285518.6|AGPAT5|ENSG00000155189.7|1-acylglycerol-3-phosphate O-acyltransferase 5
hg19_v2_chr7_-_26240357_26240377	0.00469499	CCAGCAU	ENST00000354667.4|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1 	ENST00000356674.7|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v2_chr4_-_55991752_55991770	0.00385089	CCAGCAU	ENST00000263923.4|KDR|ENSG00000128052.8|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v2_chr12_+_69864129_69864222	0.00267753	CCAGCAU	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chrX_-_119445263_119445298	0.00233172	CCAGCAU	ENST00000309720.5|TMEM255A|ENSG00000125355.11|transmembrane protein 255A
hg19_v2_chr3_-_114790179_114790222	0.0015236	CCAGCAU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
