hg19_v2_chr19_+_45312347_45312378	2.54631	CCAGUGU	ENST00000270233.6|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group) 	ENST00000591520.1|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group)
hg19_v2_chr5_-_59189545_59189625	1.73814	CCAGUGU	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr6_+_117586713_117586737	1.72868	CCAGUGU	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chr2_-_19558373_19558414	1.68394	CCAGUGU	ENST00000272223.2|OSR1|ENSG00000143867.5|odd-skipped related transciption factor 1
hg19_v2_chr1_+_185703513_185703683	1.59456	CCAGUGU	ENST00000271588.4|HMCN1|ENSG00000143341.7|hemicentin 1 	ENST00000367492.2|HMCN1|ENSG00000143341.7|hemicentin 1
hg19_v2_chr20_+_48599506_48599536	1.56023	CCAGUGU	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr1_+_182992545_182992630	1.52656	CCAGUGU	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr16_-_4292071_4292088	1.47607	CCAGUGU	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr22_-_46933067_46933067	1.46237	CCAGUGU	ENST00000262738.3|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1 	ENST00000395964.1|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1
hg19_v2_chr11_-_86666427_86666450	1.38027	CCAGUGU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr6_+_17281573_17281605	1.3416	CCAGUGU	ENST00000379052.5|RBM24|ENSG00000112183.10|RNA binding motif protein 24
hg19_v2_chr10_-_15762124_15762149	1.33011	CCAGUGU	ENST00000378076.3|ITGA8|ENSG00000077943.7|integrin, alpha 8
hg19_v2_chr22_-_28197486_28197544	1.32272	CCAGUGU	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr2_+_23608064_23608088	1.2959	CCAGUGU	ENST00000486442.1|KLHL29|ENSG00000119771.10|kelch-like family member 29
hg19_v2_chr21_+_40177143_40177231	1.27538	CCAGUGU	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr6_+_43737939_43737956	1.26061	CCAGUGU	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr19_-_56092187_56092248	1.25616	CCAGUGU	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr3_+_50192537_50192563	1.24377	CCAGUGU	ENST00000002829.3|SEMA3F|ENSG00000001617.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
hg19_v2_chr20_-_14318248_14318264	1.20973	CCAGUGU	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr7_+_116165754_116165813	1.20557	CCAGUGU	ENST00000405348.1|CAV1|ENSG00000105974.7|caveolin 1, caveolae protein, 22kDa
hg19_v2_chrY_+_15016725_15016769	1.17149	CCAGUGU	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr1_-_208417620_208417680	1.15359	CCAGUGU	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr13_-_36050819_36050834	1.14159	CCAGUGU	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr12_-_122907091_122907186	1.12439	CCAGUGU	ENST00000358808.2|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000361654.4|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000539080.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000537178.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr7_+_100770328_100770393	1.12214	CCAGUGU	ENST00000223095.4|SERPINE1|ENSG00000106366.7|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 	ENST00000445463.2|SERPINE1|ENSG00000106366.7|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
hg19_v2_chr2_+_101436564_101436647	1.09491	CCAGUGU	ENST00000335681.5|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr8_+_70378852_70378866	1.06376	CCAGUGU	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr19_+_45349432_45349625	1.06019	CCAGUGU	ENST00000252485.4|PVRL2|ENSG00000130202.5|poliovirus receptor-related 2 (herpesvirus entry mediator B)
hg19_v2_chr6_+_10556215_10556240	0.990512	CCAGUGU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr3_-_160283348_160283376	0.963687	CCAGUGU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr7_-_131241361_131241398	0.943325	CCAGUGU	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr20_-_10654639_10654694	0.935019	CCAGUGU	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr9_+_34990219_34990312	0.912993	CCAGUGU	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr14_+_105267250_105267250	0.910855	CCAGUGU	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr17_-_46682321_46682362	0.883374	CCAGUGU	ENST00000225648.3|HOXB6|ENSG00000108511.8|homeobox B6 	ENST00000484302.2|HOXB6|ENSG00000108511.8|homeobox B6
hg19_v2_chr2_+_36582857_36583069	0.871281	CCAGUGU	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr8_+_104311059_104311132	0.861844	CCAGUGU	ENST00000358755.4|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000523739.1|FZD6|ENSG00000164930.7|frizzled family receptor 6 	ENST00000540287.1|FZD6|ENSG00000164930.7|frizzled family receptor 6
hg19_v2_chr7_-_27196267_27196311	0.857105	CCAGUGU	ENST00000242159.3|HOXA7|ENSG00000122592.6|homeobox A7
hg19_v2_chr6_+_21593972_21594071	0.846691	CCAGUGU	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr8_-_66754172_66754201	0.835853	CCAGUGU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr8_-_81787006_81787031	0.812147	CCAGUGU	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr2_+_99953816_99953894	0.796947	CCAGUGU	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr11_+_120207787_120207962	0.792742	CCAGUGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr2_-_242212227_242212301	0.785179	CCAGUGU	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr9_-_128003606_128003631	0.77245	CCAGUGU	ENST00000324460.6|HSPA5|ENSG00000044574.7|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v2_chr17_-_79919154_79919169	0.767859	CCAGUGU	ENST00000409678.3|NOTUM|ENSG00000185269.7|notum pectinacetylesterase homolog (Drosophila)
hg19_v2_chr16_+_86600857_86600921	0.767251	CCAGUGU	ENST00000320354.4|FOXC2|ENSG00000176692.4|forkhead box C2 (MFH-1, mesenchyme forkhead 1)
hg19_v2_chr6_-_107436473_107436543	0.752498	CCAGUGU	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr17_+_46125707_46125746	0.750709	CCAGUGU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr22_+_41956767_41956852	0.74551	CCAGUGU	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr8_+_23430157_23430157	0.7436	CCAGUGU	ENST00000399967.3|FP15737|ENSG00000215298.3|FP15737
hg19_v2_chr1_+_15943995_15944014	0.739731	CCAGUGU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr16_-_4987065_4987156	0.731083	CCAGUGU	ENST00000590782.2|PPL|ENSG00000118898.11|periplakin 	ENST00000345988.2|PPL|ENSG00000118898.11|periplakin
hg19_v2_chr11_-_46940074_46940193	0.723225	CCAGUGU	ENST00000378623.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4 	ENST00000534404.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4
hg19_v2_chr16_+_16043406_16043434	0.722274	CCAGUGU	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chr3_+_174577070_174577136	0.697302	CCAGUGU	ENST00000454872.1|NAALADL2|ENSG00000177694.10|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v2_chr9_-_94186131_94186174	0.695759	CCAGUGU	ENST00000297689.3|NFIL3|ENSG00000165030.3|nuclear factor, interleukin 3 regulated
hg19_v2_chr10_+_60272814_60272900	0.684007	CCAGUGU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr7_-_151217001_151217019	0.678459	CCAGUGU	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr2_-_213403565_213403584	0.674051	CCAGUGU	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr9_-_127952032_127952098	0.671673	CCAGUGU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr17_-_4269768_4269835	0.6558	CCAGUGU	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr19_-_11308190_11308244	0.651268	CCAGUGU	ENST00000586659.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000592903.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000589359.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000588724.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000432929.2|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2
hg19_v2_chr3_+_99357319_99357454	0.645748	CCAGUGU	ENST00000452013.1|COL8A1|ENSG00000144810.11|collagen, type VIII, alpha 1 	ENST00000261037.3|COL8A1|ENSG00000144810.11|collagen, type VIII, alpha 1 	ENST00000273342.4|COL8A1|ENSG00000144810.11|collagen, type VIII, alpha 1
hg19_v2_chr20_-_48184638_48184694	0.642036	CCAGUGU	ENST00000244043.4|PTGIS|ENSG00000124212.5|prostaglandin I2 (prostacyclin) synthase
hg19_v2_chr4_-_23891693_23891706	0.64076	CCAGUGU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr2_+_170590321_170590408	0.628002	CCAGUGU	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr1_-_147245484_147245494	0.626439	CCAGUGU	ENST00000271348.2|GJA5|ENSG00000143140.6|gap junction protein, alpha 5, 40kDa
hg19_v2_chr8_+_30241995_30242045	0.617657	CCAGUGU	ENST00000397323.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000339877.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000320203.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000287771.5|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr19_+_49660997_49661036	0.608539	CCAGUGU	ENST00000598691.1|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4 	ENST00000252826.5|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr1_-_84972248_84972271	0.605094	CCAGUGU	ENST00000370645.4|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5 	ENST00000370641.3|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5
hg19_v2_chr19_+_12902289_12902310	0.601896	CCAGUGU	ENST00000302754.4|JUNB|ENSG00000171223.4|jun B proto-oncogene
hg19_v2_chr3_-_156877997_156878004	0.598324	CCAGUGU	ENST00000295926.3|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr9_-_73029540_73029540	0.595095	CCAGUGU	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr3_-_189838670_189838718	0.58894	CCAGUGU	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr19_-_16682987_16683243	0.584423	CCAGUGU	ENST00000431408.1|SLC35E1|ENSG00000127526.9|solute carrier family 35, member E1 	ENST00000436553.2|SLC35E1|ENSG00000127526.9|solute carrier family 35, member E1 	ENST00000595753.1|SLC35E1|ENSG00000127526.9|solute carrier family 35, member E1
hg19_v2_chr2_-_47168906_47168994	0.563499	CCAGUGU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr7_+_138916231_138916231	0.555837	CCAGUGU	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr1_-_21671968_21672009	0.549995	CCAGUGU	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr17_+_74261277_74261292	0.542717	CCAGUGU	ENST00000327490.6|UBALD2|ENSG00000185262.7|UBA-like domain containing 2
hg19_v2_chr3_+_180630090_180630311	0.541295	CCAGUGU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr8_+_144679984_144680074	0.519562	CCAGUGU	ENST00000504548.2|TIGD5|ENSG00000179886.4|tigger transposable element derived 5 	ENST00000321385.3|TIGD5|ENSG00000179886.4|tigger transposable element derived 5
hg19_v2_chr15_+_73976545_73976624	0.494082	CCAGUGU	ENST00000318443.5|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000537340.2|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000318424.5|CD276|ENSG00000103855.13|CD276 molecule
hg19_v2_chr19_-_10121144_10121155	0.485574	CCAGUGU	ENST00000264828.3|COL5A3|ENSG00000080573.6|collagen, type V, alpha 3
hg19_v2_chr2_+_61404624_61404666	0.485387	CCAGUGU	ENST00000394457.3|AHSA2|ENSG00000173209.18|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
hg19_v2_chr19_-_6459746_6459816	0.480894	CCAGUGU	ENST00000301454.4|SLC25A23|ENSG00000125648.10|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 	ENST00000334510.5|SLC25A23|ENSG00000125648.10|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v2_chr17_+_55162453_55162594	0.476206	CCAGUGU	ENST00000575322.1|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000337714.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000314126.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1
hg19_v2_chr8_+_23386305_23386318	0.445828	CCAGUGU	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr12_+_53774423_53774658	0.445401	CCAGUGU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr12_-_120687948_120687971	0.437893	CCAGUGU	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr8_-_13372395_13372429	0.431639	CCAGUGU	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr1_-_115212696_115212732	0.431474	CCAGUGU	ENST00000393276.3|DENND2C|ENSG00000175984.10|DENN/MADD domain containing 2C 	ENST00000393277.1|DENND2C|ENSG00000175984.10|DENN/MADD domain containing 2C
hg19_v2_chr21_-_34144157_34144175	0.419685	CCAGUGU	ENST00000331923.4|PAXBP1|ENSG00000159086.10|PAX3 and PAX7 binding protein 1
hg19_v2_chr8_+_37553261_37553282	0.418958	CCAGUGU	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr5_+_98104978_98105010	0.416541	CCAGUGU	ENST00000308234.7|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr11_-_34379546_34379563	0.407322	CCAGUGU	ENST00000435224.2|ABTB2|ENSG00000166016.4|ankyrin repeat and BTB (POZ) domain containing 2
hg19_v2_chr19_+_13906250_13906274	0.404173	CCAGUGU	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr12_+_104682496_104682651	0.400653	CCAGUGU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr14_+_67707826_67707994	0.392097	CCAGUGU	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr21_-_28338732_28338832	0.385116	CCAGUGU	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr16_-_23160591_23160787	0.378901	CCAGUGU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr12_-_56652111_56652183	0.36455	CCAGUGU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr15_-_42264702_42264812	0.363961	CCAGUGU	ENST00000220325.4|EHD4|ENSG00000103966.5|EH-domain containing 4
hg19_v2_chr1_-_39325431_39325495	0.363302	CCAGUGU	ENST00000373001.3|RRAGC|ENSG00000116954.7|Ras-related GTP binding C
hg19_v2_chr12_+_72148614_72148699	0.362878	CCAGUGU	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr2_-_101767715_101767881	0.362483	CCAGUGU	ENST00000376840.4|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain) 	ENST00000409318.1|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain)
hg19_v2_chr4_+_25314388_25314437	0.36208	CCAGUGU	ENST00000302874.4|ZCCHC4|ENSG00000168228.10|zinc finger, CCHC domain containing 4
hg19_v2_chr16_-_67840442_67840555	0.358894	CCAGUGU	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr22_-_37415475_37415681	0.357643	CCAGUGU	ENST00000403892.3|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese) 	ENST00000249042.3|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese) 	ENST00000438203.1|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese)
hg19_v2_chr1_-_94703118_94703189	0.35726	CCAGUGU	ENST00000260526.6|ARHGAP29|ENSG00000137962.8|Rho GTPase activating protein 29 	ENST00000370217.3|ARHGAP29|ENSG00000137962.8|Rho GTPase activating protein 29
hg19_v2_chr1_+_160085501_160085563	0.355152	CCAGUGU	ENST00000361216.3|ATP1A2|ENSG00000018625.10|ATPase, Na+/K+ transporting, alpha 2 polypeptide
hg19_v2_chr18_+_43753974_43754019	0.353807	CCAGUGU	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr17_+_53342311_53342400	0.352269	CCAGUGU	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr17_-_15165854_15165906	0.344177	CCAGUGU	ENST00000395936.1|PMP22|ENSG00000109099.9|peripheral myelin protein 22 	ENST00000395938.2|PMP22|ENSG00000109099.9|peripheral myelin protein 22
hg19_v2_chr14_+_50359773_50359850	0.334879	CCAGUGU	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr7_-_116963334_116963345	0.328277	CCAGUGU	ENST00000265441.3|WNT2|ENSG00000105989.4|wingless-type MMTV integration site family member 2
hg19_v2_chr12_+_102271129_102271164	0.327337	CCAGUGU	ENST00000258534.8|DRAM1|ENSG00000136048.9|DNA-damage regulated autophagy modulator 1
hg19_v2_chr8_+_37654424_37654436	0.321627	CCAGUGU	ENST00000315215.7|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chr1_+_2985760_2985775	0.320483	CCAGUGU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr9_-_111882195_111882255	0.316415	CCAGUGU	ENST00000374586.3|TMEM245|ENSG00000106771.8|transmembrane protein 245
hg19_v2_chr6_+_30951487_30951504	0.315061	CCAGUGU	ENST00000486149.2|MUC21|ENSG00000204544.5|mucin 21, cell surface associated 	ENST00000376296.3|MUC21|ENSG00000204544.5|mucin 21, cell surface associated
hg19_v2_chr8_-_93115445_93115462	0.314851	CCAGUGU	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr10_+_31608054_31608156	0.312799	CCAGUGU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr2_-_183903133_183903210	0.312203	CCAGUGU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr15_-_77363513_77363570	0.312103	CCAGUGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr3_+_186648274_186648301	0.299867	CCAGUGU	ENST00000169298.3|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr6_+_44094627_44094662	0.297968	CCAGUGU	ENST00000259746.9|TMEM63B|ENSG00000137216.14|transmembrane protein 63B
hg19_v2_chrX_-_77150985_77151090	0.297443	CCAGUGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr1_-_153895377_153895465	0.290292	CCAGUGU	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr19_-_11039261_11039357	0.289345	CCAGUGU	ENST00000590329.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000587943.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000585858.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586748.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586575.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000253031.2|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2
hg19_v2_chr2_-_39664405_39664453	0.283175	CCAGUGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr2_+_148602058_148602185	0.278843	CCAGUGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr1_+_28995231_28995250	0.277384	CCAGUGU	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr13_-_50510434_50510490	0.27497	CCAGUGU	ENST00000361840.3|SPRYD7|ENSG00000123178.10|SPRY domain containing 7
hg19_v2_chr19_+_10654561_10654600	0.266522	CCAGUGU	ENST00000309469.4|ATG4D|ENSG00000130734.5|autophagy related 4D, cysteine peptidase
hg19_v2_chr7_-_139763521_139763521	0.264401	CCAGUGU	ENST00000263549.3|PARP12|ENSG00000059378.8|poly (ADP-ribose) polymerase family, member 12
hg19_v2_chr16_-_30798492_30798535	0.260675	CCAGUGU	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chrX_+_41192595_41192651	0.259572	CCAGUGU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr1_+_27561007_27561061	0.244259	CCAGUGU	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr19_-_56135928_56135967	0.243673	CCAGUGU	ENST00000591479.1|ZNF784|ENSG00000179922.5|zinc finger protein 784 	ENST00000325351.4|ZNF784|ENSG00000179922.5|zinc finger protein 784
hg19_v2_chr1_-_156023580_156023605	0.242082	CCAGUGU	ENST00000368309.3|UBQLN4|ENSG00000160803.7|ubiquilin 4
hg19_v2_chr9_+_34179003_34179064	0.240161	CCAGUGU	ENST00000545103.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000543944.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000536252.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000540348.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000297661.4|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000379186.4|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1
hg19_v2_chr6_-_146135880_146135952	0.239447	CCAGUGU	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr7_-_81399438_81399514	0.239394	CCAGUGU	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr11_+_58346584_58346607	0.234727	CCAGUGU	ENST00000316059.6|ZFP91|ENSG00000186660.14|ZFP91 zinc finger protein
hg19_v2_chr15_+_84322827_84322861	0.229238	CCAGUGU	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr15_-_34394119_34394149	0.229173	CCAGUGU	ENST00000256545.4|EMC7|ENSG00000134153.5|ER membrane protein complex subunit 7
hg19_v2_chr14_+_75469606_75469690	0.227999	CCAGUGU	ENST00000266126.5|EIF2B2|ENSG00000119718.6|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
hg19_v2_chr17_-_27169745_27169857	0.226303	CCAGUGU	ENST00000583307.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000581229.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000582266.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000577376.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000577682.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000581381.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000341217.5|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000581407.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000583522.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B
hg19_v2_chr9_+_110045537_110045572	0.226069	CCAGUGU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr3_-_14166316_14166383	0.223387	CCAGUGU	ENST00000396914.3|CHCHD4|ENSG00000163528.8|coiled-coil-helix-coiled-coil-helix domain containing 4 	ENST00000295767.5|CHCHD4|ENSG00000163528.8|coiled-coil-helix-coiled-coil-helix domain containing 4
hg19_v2_chr12_+_57482665_57482699	0.223367	CCAGUGU	ENST00000300131.3|NAB2|ENSG00000166886.8|NGFI-A binding protein 2 (EGR1 binding protein 2)
hg19_v2_chr1_+_19970657_19970796	0.219756	CCAGUGU	ENST00000375136.3|NBL1|ENSG00000158747.9|neuroblastoma 1, DAN family BMP antagonist
hg19_v2_chr1_-_175161890_175161929	0.215619	CCAGUGU	ENST00000545251.2|KIAA0040|ENSG00000235750.5|KIAA0040 	ENST00000423313.1|KIAA0040|ENSG00000235750.5|KIAA0040
hg19_v2_chr2_+_29204161_29204178	0.210369	CCAGUGU	ENST00000379558.4|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A 	ENST00000403861.2|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A
hg19_v2_chr22_+_31031639_31031804	0.209957	CCAGUGU	ENST00000343605.4|SLC35E4|ENSG00000100036.11|solute carrier family 35, member E4 	ENST00000300385.8|SLC35E4|ENSG00000100036.11|solute carrier family 35, member E4
hg19_v2_chr11_-_57298187_57298276	0.207381	CCAGUGU	ENST00000525158.1|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast) 	ENST00000257245.4|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast) 	ENST00000525587.1|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast)
hg19_v2_chr1_+_218458625_218458660	0.205286	CCAGUGU	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr9_+_116638562_116638606	0.203871	CCAGUGU	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr15_-_75135453_75135538	0.202554	CCAGUGU	ENST00000569437.1|ULK3|ENSG00000140474.8|unc-51 like kinase 3 	ENST00000440863.2|ULK3|ENSG00000140474.8|unc-51 like kinase 3
hg19_v2_chr14_+_103388976_103389025	0.197914	CCAGUGU	ENST00000299155.5|AMN|ENSG00000166126.6|amnion associated transmembrane protein
hg19_v2_chr19_+_57874835_57874966	0.197204	CCAGUGU	ENST00000543226.1|TRAPPC2P1|ENSG00000256060.2|trafficking protein particle complex 2 pseudogene 1 	ENST00000282282.3|ZNF547|ENSG00000152433.10|zinc finger protein 547 	ENST00000597658.1|AC003002.4|ENSG00000268133.1|Uncharacterized protein  	ENST00000596755.1|TRAPPC2P1|ENSG00000256060.2|trafficking protein particle complex 2 pseudogene 1
hg19_v2_chr5_+_139493665_139493718	0.196243	CCAGUGU	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr13_+_48877895_48877929	0.190733	CCAGUGU	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr3_-_136471204_136471249	0.188887	CCAGUGU	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr19_+_45754505_45754577	0.188501	CCAGUGU	ENST00000262891.4|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4 	ENST00000300843.4|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4
hg19_v2_chr9_-_35732362_35732392	0.186199	CCAGUGU	ENST00000314888.9|TLN1|ENSG00000137076.14|talin 1 	ENST00000540444.1|TLN1|ENSG00000137076.14|talin 1
hg19_v2_chr15_+_67813406_67813492	0.182625	CCAGUGU	ENST00000342683.4|C15orf61|ENSG00000189227.4|chromosome 15 open reading frame 61
hg19_v2_chr4_-_78740511_78740544	0.178849	CCAGUGU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr5_-_56247935_56247959	0.173586	CCAGUGU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr9_-_107690420_107690518	0.170131	CCAGUGU	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chrX_-_99891796_99891811	0.167365	CCAGUGU	ENST00000373020.4|TSPAN6|ENSG00000000003.10|tetraspanin 6
hg19_v2_chr7_+_7606497_7606595	0.166806	CCAGUGU	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr12_-_48744554_48744733	0.166592	CCAGUGU	ENST00000544117.2|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000548932.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000549125.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000301042.3|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000547026.1|ZNF641|ENSG00000167528.8|zinc finger protein 641
hg19_v2_chr13_+_28813645_28813770	0.165652	CCAGUGU	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr3_+_48956249_48956330	0.165558	CCAGUGU	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr22_-_46373004_46373016	0.163501	CCAGUGU	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr1_+_218519577_218519594	0.163319	CCAGUGU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr2_-_176948641_176948641	0.163072	CCAGUGU	ENST00000308618.4|EVX2|ENSG00000174279.4|even-skipped homeobox 2
hg19_v2_chr22_-_42017021_42017100	0.162289	CCAGUGU	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr1_+_160313062_160313160	0.159156	CCAGUGU	ENST00000294785.5|NCSTN|ENSG00000162736.11|nicastrin 	ENST00000368063.1|NCSTN|ENSG00000162736.11|nicastrin 	ENST00000437169.1|NCSTN|ENSG00000162736.11|nicastrin
hg19_v2_chr10_-_120514720_120514758	0.159012	CCAGUGU	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr3_-_15106747_15106842	0.158135	CCAGUGU	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chr4_+_140222609_140222742	0.156332	CCAGUGU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr7_+_69064300_69064342	0.156002	CCAGUGU	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr17_-_56084578_56084707	0.153073	CCAGUGU	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr4_+_55524085_55524110	0.152854	CCAGUGU	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr10_-_71930222_71930280	0.150514	CCAGUGU	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr15_-_63674218_63674360	0.146735	CCAGUGU	ENST00000178638.3|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr6_+_149887377_149887430	0.144751	CCAGUGU	ENST00000367419.5|GINM1|ENSG00000055211.8|glycoprotein integral membrane 1
hg19_v2_chr14_-_55878538_55878576	0.142517	CCAGUGU	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr15_+_90544532_90544624	0.141328	CCAGUGU	ENST00000268154.4|ZNF710|ENSG00000140548.5|zinc finger protein 710
hg19_v2_chr1_+_28696111_28696130	0.14051	CCAGUGU	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr9_+_35749203_35749350	0.139236	CCAGUGU	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chr8_+_98881268_98881382	0.138891	CCAGUGU	ENST00000254898.5|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000524308.1|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000522025.2|MATN2|ENSG00000132561.9|matrilin 2
hg19_v2_chr10_+_69644404_69644427	0.138539	CCAGUGU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr2_+_202316392_202316519	0.136163	CCAGUGU	ENST00000194530.3|STRADB|ENSG00000082146.8|STE20-related kinase adaptor beta 	ENST00000392249.2|STRADB|ENSG00000082146.8|STE20-related kinase adaptor beta
hg19_v2_chr11_-_66115032_66115163	0.135869	CCAGUGU	ENST00000311181.4|B3GNT1|ENSG00000174684.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v2_chr1_+_51701924_51702001	0.133339	CCAGUGU	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr17_+_35849937_35850006	0.128178	CCAGUGU	ENST00000394389.4|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr9_+_37422663_37422743	0.125522	CCAGUGU	ENST00000318158.6|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase 	ENST00000607784.1|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase
hg19_v2_chr7_+_77469439_77469497	0.124382	CCAGUGU	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr17_+_685513_685621	0.124349	CCAGUGU	ENST00000304478.4|RNMTL1|ENSG00000171861.6|RNA methyltransferase like 1
hg19_v2_chr19_+_34745442_34745502	0.123826	CCAGUGU	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr1_+_89149905_89149995	0.123725	CCAGUGU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr12_+_27677085_27677189	0.122077	CCAGUGU	ENST00000545334.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000540114.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000537927.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000318304.8|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000535047.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000542629.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000228425.6|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
hg19_v2_chr3_-_195270162_195270209	0.121101	CCAGUGU	ENST00000438848.1|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2 	ENST00000328432.3|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v2_chr16_+_50099852_50099956	0.120598	CCAGUGU	ENST00000299192.7|HEATR3|ENSG00000155393.8|HEAT repeat containing 3 	ENST00000285767.4|HEATR3|ENSG00000155393.8|HEAT repeat containing 3
hg19_v2_chr11_-_62414070_62414104	0.119626	CCAGUGU	ENST00000540933.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000346178.4|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000356638.3|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000534779.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000525994.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB
hg19_v2_chr3_-_125094093_125094198	0.118652	CCAGUGU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr5_-_176778523_176778684	0.117912	CCAGUGU	ENST00000513877.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000515209.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000514458.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000502560.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2
hg19_v2_chr14_+_20937538_20937700	0.11488	CCAGUGU	ENST00000361505.5|PNP|ENSG00000198805.7|purine nucleoside phosphorylase 	ENST00000553591.1|PNP|ENSG00000198805.7|purine nucleoside phosphorylase
hg19_v2_chrX_+_23801280_23801297	0.112999	CCAGUGU	ENST00000379251.3|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379253.3|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379254.1|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379270.4|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1
hg19_v2_chr17_-_42767115_42767166	0.106374	CCAGUGU	ENST00000315286.8|CCDC43|ENSG00000180329.9|coiled-coil domain containing 43 	ENST00000588210.1|CCDC43|ENSG00000180329.9|coiled-coil domain containing 43 	ENST00000457422.2|CCDC43|ENSG00000180329.9|coiled-coil domain containing 43
hg19_v2_chr17_-_62502639_62502849	0.105732	CCAGUGU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr13_+_58206655_58206655	0.104121	CCAGUGU	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr2_+_70485220_70485293	0.102838	CCAGUGU	ENST00000433351.2|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1 	ENST00000264441.5|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1
hg19_v2_chr3_+_160473996_160474033	0.0980049	CCAGUGU	ENST00000498165.1|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg19_v2_chr14_+_75536280_75536321	0.0975813	CCAGUGU	ENST00000238686.8|ZC2HC1C|ENSG00000119703.12|zinc finger, C2HC-type containing 1C
hg19_v2_chr12_-_9102549_9102591	0.0959617	CCAGUGU	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr5_-_89825328_89825422	0.0950545	CCAGUGU	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr20_-_36156125_36156250	0.0943941	CCAGUGU	ENST00000397135.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein 	ENST00000397137.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr8_-_122653630_122653661	0.0908504	CCAGUGU	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr3_-_48471454_48471594	0.0903898	CCAGUGU	ENST00000296440.6|PLXNB1|ENSG00000164050.8|plexin B1 	ENST00000448774.2|PLXNB1|ENSG00000164050.8|plexin B1
hg19_v2_chr2_-_153574480_153574552	0.0882075	CCAGUGU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr1_+_36348790_36348822	0.0873639	CCAGUGU	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr7_+_140774032_140774032	0.0849082	CCAGUGU	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr17_+_45973516_45973618	0.0848224	CCAGUGU	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr15_+_85923856_85923987	0.0841262	CCAGUGU	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr20_-_62601218_62601291	0.0839564	CCAGUGU	ENST00000369888.1|ZNF512B|ENSG00000196700.3|zinc finger protein 512B
hg19_v2_chr16_+_31044812_31044931	0.0835883	CCAGUGU	ENST00000313843.3|STX4|ENSG00000103496.10|syntaxin 4
hg19_v2_chr2_+_26256938_26257031	0.0801427	CCAGUGU	ENST00000264710.4|RAB10|ENSG00000084733.6|RAB10, member RAS oncogene family
hg19_v2_chr12_-_92539614_92539673	0.0791418	CCAGUGU	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr11_-_128392085_128392232	0.0790978	CCAGUGU	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr3_-_113415441_113415500	0.0779881	CCAGUGU	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chr1_+_33005020_33005077	0.0761933	CCAGUGU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr1_-_231473578_231473619	0.074399	CCAGUGU	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr1_+_145883868_145883868	0.0730183	CCAGUGU	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr9_+_131445928_131445934	0.0714966	CCAGUGU	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr10_-_105615164_105615323	0.0714263	CCAGUGU	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr7_+_107220422_107220468	0.0705024	CCAGUGU	ENST00000005259.4|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr12_-_30848914_30848948	0.0685728	CCAGUGU	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr12_-_14956396_14956474	0.0613138	CCAGUGU	ENST00000535328.1|WBP11|ENSG00000084463.3|WW domain binding protein 11 	ENST00000261167.2|WBP11|ENSG00000084463.3|WW domain binding protein 11
hg19_v2_chr2_+_109335929_109336002	0.0611144	CCAGUGU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr1_+_222886694_222886742	0.060692	CCAGUGU	ENST00000426638.1|BROX|ENSG00000162819.7|BRO1 domain and CAAX motif containing 	ENST00000537020.1|BROX|ENSG00000162819.7|BRO1 domain and CAAX motif containing 	ENST00000539697.1|BROX|ENSG00000162819.7|BRO1 domain and CAAX motif containing
hg19_v2_chr1_+_147400506_147400549	0.0587077	CCAGUGU	ENST00000314163.7|GPR89B|ENSG00000188092.10|G protein-coupled receptor 89B 	ENST00000468618.2|GPR89B|ENSG00000188092.10|G protein-coupled receptor 89B
hg19_v2_chr17_-_27621125_27621143	0.0586335	CCAGUGU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr3_+_51575596_51575596	0.0580835	CCAGUGU	ENST00000409535.2|RAD54L2|ENSG00000164080.9|RAD54-like 2 (S. cerevisiae)
hg19_v2_chr3_-_129325660_129325669	0.0578108	CCAGUGU	ENST00000324093.4|PLXND1|ENSG00000004399.8|plexin D1 	ENST00000393239.1|PLXND1|ENSG00000004399.8|plexin D1
hg19_v2_chr1_+_100435315_100435345	0.057613	CCAGUGU	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr17_+_45727204_45727220	0.0559181	CCAGUGU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chrX_-_30885319_30885319	0.0556815	CCAGUGU	ENST00000378933.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr2_+_157291953_157292003	0.0527272	CCAGUGU	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr5_+_154320623_154320673	0.0503821	CCAGUGU	ENST00000523037.1|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000265229.8|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000439747.3|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000522038.1|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22
hg19_v2_chr1_-_89531041_89531050	0.0501564	CCAGUGU	ENST00000370473.4|GBP1|ENSG00000117228.9|guanylate binding protein 1, interferon-inducible
hg19_v2_chr9_-_36400213_36400296	0.0487144	CCAGUGU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr13_+_95254085_95254171	0.0486656	CCAGUGU	ENST00000376958.4|GPR180|ENSG00000152749.7|G protein-coupled receptor 180
hg19_v2_chr17_-_5389477_5389537	0.0483906	CCAGUGU	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr3_-_183735731_183735803	0.0470721	CCAGUGU	ENST00000334444.6|ABCC5|ENSG00000114770.12|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v2_chr1_+_193091080_193091222	0.0457297	CCAGUGU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr2_-_223163465_223163730	0.044837	CCAGUGU	ENST00000409828.3|PAX3|ENSG00000135903.14|paired box 3 	ENST00000350526.4|PAX3|ENSG00000135903.14|paired box 3 	ENST00000258387.5|PAX3|ENSG00000135903.14|paired box 3 	ENST00000409551.3|PAX3|ENSG00000135903.14|paired box 3 	ENST00000392069.2|PAX3|ENSG00000135903.14|paired box 3 	ENST00000344493.4|PAX3|ENSG00000135903.14|paired box 3 	ENST00000336840.6|PAX3|ENSG00000135903.14|paired box 3 	ENST00000392070.2|PAX3|ENSG00000135903.14|paired box 3
hg19_v2_chr19_+_12203069_12203094	0.044425	CCAGUGU	ENST00000430298.2|ZNF788|ENSG00000214189.4|zinc finger family member 788 	ENST00000339302.4|ZNF788|ENSG00000188474.6|Zinc finger protein 788
hg19_v2_chr2_-_11606275_11606289	0.0438666	CCAGUGU	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr9_-_37465396_37465454	0.0400497	CCAGUGU	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr10_+_102295616_102295713	0.0382687	CCAGUGU	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr11_+_9685604_9685706	0.0357105	CCAGUGU	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr11_-_2906979_2907111	0.0334772	CCAGUGU	ENST00000380725.1|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000313407.6|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000430149.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000440480.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000414822.3|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2)
hg19_v2_chr1_-_145827015_145827103	0.0306141	CCAGUGU	ENST00000534502.1|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A 	ENST00000313835.9|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A 	ENST00000454423.3|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A
hg19_v2_chr1_+_159796534_159796545	0.0300355	CCAGUGU	ENST00000289707.5|SLAMF8|ENSG00000158714.6|SLAM family member 8
hg19_v2_chr14_-_36278412_36278437	0.0294798	CCAGUGU	ENST00000389698.3|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic) 	ENST00000258840.6|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg19_v2_chr20_+_19867150_19867175	0.028234	CCAGUGU	ENST00000255006.6|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chrX_+_48916497_48916557	0.0277593	CCAGUGU	ENST00000496529.2|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000376396.3|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000422185.2|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000603986.1|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120 	ENST00000536628.2|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120
hg19_v2_chr18_+_60190226_60190314	0.0274519	CCAGUGU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr11_-_27528301_27528336	0.0259076	CCAGUGU	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr18_+_32558208_32558340	0.0254999	CCAGUGU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr14_-_23388338_23388393	0.0239108	CCAGUGU	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr22_-_18507279_18507364	0.0214367	CCAGUGU	ENST00000441493.2|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000444520.1|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000207726.7|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENST00000429452.1|MICAL3|ENSG00000243156.3|microtubule associated monooxygenase, calponin and LIM domain containing 3
hg19_v2_chr22_+_30279144_30279202	0.0202372	CCAGUGU	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr3_+_88188254_88188254	0.0197521	CCAGUGU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr13_+_25875662_25875782	0.0177233	CCAGUGU	ENST00000381736.3|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000463407.1|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000381718.3|NUPL1|ENSG00000139496.11|nucleoporin like 1
hg19_v2_chr20_+_48429356_48429458	0.0158929	CCAGUGU	ENST00000361573.2|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000541138.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000539601.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr7_+_144052381_144052509	0.014886	CCAGUGU	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr10_-_98346801_98346812	0.0148577	CCAGUGU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr10_+_89264625_89264637	0.0107046	CCAGUGU	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chr16_-_69419871_69419927	0.0104308	CCAGUGU	ENST00000603068.1|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000254942.3|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000567296.2|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2
hg19_v2_chr3_+_38495333_38495422	0.00735556	CCAGUGU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr17_-_79479789_79479900	0.00689529	CCAGUGU	ENST00000571691.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000571721.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000573283.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000575842.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000575087.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000570382.1|ACTG1|ENSG00000184009.5|actin, gamma 1 	ENST00000331925.2|ACTG1|ENSG00000184009.5|actin, gamma 1
hg19_v2_chrX_-_77395186_77395203	0.00474851	CCAGUGU	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr10_+_112679301_112679346	0.00452868	CCAGUGU	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr11_+_63706444_63706486	0.00184161	CCAGUGU	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
