hg19_v2_chr17_-_26695013_26695033	12.0069	FOXA1	ENST00000555059.2|CTB-96E2.2|ENSG00000273171.1|Homeobox protein SEBOX
hg19_v2_chr17_-_26694979_26695007	11.8302	FOXA1	ENST00000438614.1|VTN|ENSG00000109072.9|vitronectin
hg19_v2_chr1_-_57431679_57431810	9.76938	FOXA1	ENST00000371237.4|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000535057.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000543257.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide
hg19_v2_chr14_-_94789663_94789731	9.39118	FOXA1	ENST00000557225.1|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 	ENST00000341584.3|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
hg19_v2_chr4_-_155533787_155534119	9.12462	FOXA1	ENST00000407946.1|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000405164.1|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000336098.3|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000393846.2|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000404648.3|FGG|ENSG00000171557.12|fibrinogen gamma chain 	ENST00000443553.1|FGG|ENSG00000171557.12|fibrinogen gamma chain
hg19_v2_chr17_-_39684550_39684567	7.63064	FOXA1	ENST00000455635.1|KRT19|ENSG00000171345.9|keratin 19 	ENST00000361566.3|KRT19|ENSG00000171345.9|keratin 19
hg19_v2_chr14_-_38064198_38064239	6.54119	FOXA1	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr10_+_81370689_81370711	6.39262	FOXA1	ENST00000372308.3|SFTPA1|ENSG00000122852.10|surfactant protein A1 	ENST00000398636.3|SFTPA1|ENSG00000122852.10|surfactant protein A1 	ENST00000428376.2|SFTPA1|ENSG00000122852.10|surfactant protein A1 	ENST00000372313.5|SFTPA1|ENSG00000122852.10|surfactant protein A1 	ENST00000419470.2|SFTPA1|ENSG00000122852.10|surfactant protein A1 	ENST00000429958.1|SFTPA1|ENSG00000122852.10|surfactant protein A1 	ENST00000439264.1|SFTPA1|ENSG00000122852.10|surfactant protein A1
hg19_v2_chr4_-_72649763_72649802	6.18515	FOXA1	ENST00000513476.1|GC|ENSG00000145321.8|group-specific component (vitamin D binding protein)
hg19_v2_chr17_-_46035187_46035260	6.09371	FOXA1	ENST00000300557.2|PRR15L|ENSG00000167183.2|proline rich 15-like
hg19_v2_chr11_-_116663127_116663141	5.76313	FOXA1	ENST00000433069.1|APOA5|ENSG00000110243.7|apolipoprotein A-V 	ENST00000542499.1|APOA5|ENSG00000110243.7|apolipoprotein A-V
hg19_v2_chr8_+_120079478_120079499	5.60906	FOXA1	ENST00000332843.2|COLEC10|ENSG00000184374.2|collectin sub-family member 10 (C-type lectin)
hg19_v2_chr5_-_41213607_41213697	5.55326	FOXA1	ENST00000337836.5|C6|ENSG00000039537.9|complement component 6 	ENST00000433294.1|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr22_+_21128167_21128167	5.4818	FOXA1	ENST00000215727.5|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr11_+_62186498_62186515	5.47784	FOXA1	ENST00000278282.2|SCGB1A1|ENSG00000149021.2|secretoglobin, family 1A, member 1 (uteroglobin)
hg19_v2_chr3_+_52811596_52811637	5.04292	FOXA1	ENST00000542827.1|ITIH1|ENSG00000055957.6|inter-alpha-trypsin inhibitor heavy chain 1 	ENST00000273283.2|ITIH1|ENSG00000055957.6|inter-alpha-trypsin inhibitor heavy chain 1
hg19_v2_chr4_+_187148556_187148687	4.96445	FOXA1	ENST00000264690.6|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000446598.2|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000414291.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000513864.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1
hg19_v2_chr3_+_186330712_186330863	4.9259	FOXA1	ENST00000411641.2|AHSG|ENSG00000145192.8|alpha-2-HS-glycoprotein 	ENST00000273784.5|AHSG|ENSG00000145192.8|alpha-2-HS-glycoprotein
hg19_v2_chr5_-_41213123_41213190	4.91667	FOXA1	ENST00000417809.1|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr15_+_69854027_69854062	4.87452	FOXA1	ENST00000498938.2|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr10_-_81320151_81320168	4.84577	FOXA1	ENST00000372325.2|SFTPA2|ENSG00000185303.11|surfactant protein A2 	ENST00000372327.5|SFTPA2|ENSG00000185303.11|surfactant protein A2 	ENST00000417041.1|SFTPA2|ENSG00000185303.11|surfactant protein A2
hg19_v2_chr10_+_51549498_51549557	4.82495	FOXA1	ENST00000358559.2|MSMB|ENSG00000138294.9|microseminoprotein, beta- 	ENST00000298239.6|MSMB|ENSG00000138294.9|microseminoprotein, beta-
hg19_v2_chr11_-_102401469_102401488	4.55265	FOXA1	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr2_-_89161064_89161082	4.29183	FOXA1	ENST00000390241.2|IGKJ2|ENSG00000211596.2|immunoglobulin kappa joining 2
hg19_v2_chr20_-_7921090_7921121	4.2817	FOXA1	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr12_-_53343602_53343631	4.27776	FOXA1	ENST00000546897.1|KRT8|ENSG00000170421.7|keratin 8 	ENST00000552551.1|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr2_+_7865923_7865941	4.24689	FOXA1	ENST00000417930.1|AC092580.4|ENSG00000235576.1|AC092580.4
hg19_v2_chr20_+_31595406_31595426	4.24318	FOXA1	ENST00000170150.3|BPIFB2|ENSG00000078898.6|BPI fold containing family B, member 2
hg19_v2_chr14_-_36988882_36988898	4.2348	FOXA1	ENST00000498187.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr3_+_137717571_137717591	3.88023	FOXA1	ENST00000343735.4|CLDN18|ENSG00000066405.8|claudin 18
hg19_v2_chr21_-_31588365_31588398	3.83848	FOXA1	ENST00000399899.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chrX_+_135614293_135614318	3.81269	FOXA1	ENST00000370634.3|VGLL1|ENSG00000102243.8|vestigial like 1 (Drosophila)
hg19_v2_chr1_-_27240455_27240474	3.79663	FOXA1	ENST00000254227.3|NR0B2|ENSG00000131910.4|nuclear receptor subfamily 0, group B, member 2
hg19_v2_chr16_-_86542455_86542500	3.78404	FOXA1	ENST00000595886.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000597578.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000593604.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA
hg19_v2_chr4_+_187187098_187187127	3.76617	FOXA1	ENST00000403665.2|F11|ENSG00000088926.9|coagulation factor XI 	ENST00000264692.4|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr2_-_89160425_89160447	3.69802	FOXA1	ENST00000390239.2|IGKJ4|ENSG00000211594.2|immunoglobulin kappa joining 4
hg19_v2_chr12_-_53343633_53343696	3.66331	FOXA1	ENST00000546826.1|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr2_-_69180083_69180102	3.64555	FOXA1	ENST00000328895.4|GKN2|ENSG00000183607.5|gastrokine 2
hg19_v2_chr3_+_137728842_137728952	3.59682	FOXA1	ENST00000183605.5|CLDN18|ENSG00000066405.8|claudin 18
hg19_v2_chr19_+_18496957_18496977	3.56061	FOXA1	ENST00000252809.3|GDF15|ENSG00000130513.6|growth differentiation factor 15
hg19_v2_chr3_-_148939598_148939622	3.52215	FOXA1	ENST00000455472.3|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr12_-_53343560_53343584	3.47816	FOXA1	ENST00000548998.1|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr21_-_31588338_31588357	3.47774	FOXA1	ENST00000286809.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr21_-_43735446_43735525	3.47432	FOXA1	ENST00000398431.2|TFF3|ENSG00000160180.14|trefoil factor 3 (intestinal)
hg19_v2_chr1_+_200011711_200011752	3.39616	FOXA1	ENST00000544748.1|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr2_-_165424973_165425010	3.30422	FOXA1	ENST00000543549.1|GRB14|ENSG00000115290.5|growth factor receptor-bound protein 14
hg19_v2_chr2_+_162101247_162101266	3.26491	FOXA1	ENST00000439050.1|AC009299.3|ENSG00000227403.1|AC009299.3	ENST00000436506.1|AC009299.3|ENSG00000227403.1|AC009299.3
hg19_v2_chr11_-_124622134_124622162	3.24902	FOXA1	ENST00000326621.5|VSIG2|ENSG00000019102.7|V-set and immunoglobulin domain containing 2
hg19_v2_chr13_-_86373536_86373623	3.19783	FOXA1	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr2_-_89160770_89160770	3.18927	FOXA1	ENST00000390240.2|IGKJ3|ENSG00000211595.2|immunoglobulin kappa joining 3
hg19_v2_chr2_-_89160117_89160117	3.17984	FOXA1	ENST00000390238.2|IGKJ5|ENSG00000211593.2|immunoglobulin kappa joining 5
hg19_v2_chr12_-_120765565_120765592	3.17723	FOXA1	ENST00000423423.3|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas) 	ENST00000308366.4|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas)
hg19_v2_chr12_-_91572278_91572329	3.14699	FOXA1	ENST00000425043.1|DCN|ENSG00000011465.12|decorin 	ENST00000420120.2|DCN|ENSG00000011465.12|decorin 	ENST00000441303.2|DCN|ENSG00000011465.12|decorin 	ENST00000456569.2|DCN|ENSG00000011465.12|decorin
hg19_v2_chr7_+_134576151_134576171	3.11212	FOXA1	ENST00000393118.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr2_-_21266935_21266951	3.1116	FOXA1	ENST00000233242.1|APOB|ENSG00000084674.9|apolipoprotein B
hg19_v2_chr1_+_199996733_199996781	2.97507	FOXA1	ENST00000236914.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr17_+_8924837_8924872	2.97395	FOXA1	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr3_+_148447887_148447911	2.94667	FOXA1	ENST00000475347.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000474935.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000461609.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1
hg19_v2_chr3_-_148939835_148939842	2.9431	FOXA1	ENST00000264613.6|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr6_+_135502501_135502652	2.92941	FOXA1	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr7_+_73242490_73242532	2.92781	FOXA1	ENST00000431918.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr1_+_199996702_199996732	2.90837	FOXA1	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr15_+_96869165_96869183	2.90764	FOXA1	ENST00000421109.2|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr11_-_124622083_124622095	2.82375	FOXA1	ENST00000403470.1|VSIG2|ENSG00000019102.7|V-set and immunoglobulin domain containing 2
hg19_v2_chr9_-_4859260_4859260	2.7829	FOXA1	ENST00000599351.1|AL158147.2|ENSG00000269305.1|HCG2011465; Uncharacterized protein
hg19_v2_chr1_-_177939041_177939053	2.73574	FOXA1	ENST00000308284.6|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr4_+_55095264_55095390	2.71381	FOXA1	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr10_+_124320156_124320181	2.71184	FOXA1	ENST00000338354.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000344338.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000330163.4|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368909.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368955.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368956.2|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr4_+_187187337_187187369	2.69178	FOXA1	ENST00000492972.2|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr2_-_69180012_69180036	2.68219	FOXA1	ENST00000481498.1|GKN2|ENSG00000183607.5|gastrokine 2
hg19_v2_chr1_-_203320617_203320617	2.67918	FOXA1	ENST00000354955.4|FMOD|ENSG00000122176.10|fibromodulin
hg19_v2_chr12_-_102872317_102872429	2.67455	FOXA1	ENST00000424202.2|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr18_+_56113488_56113507	2.65099	FOXA1	ENST00000590797.1|RP11-1151B14.3|ENSG00000267391.1|RP11-1151B14.3
hg19_v2_chr6_+_161123270_161123278	2.64825	FOXA1	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr20_+_31823792_31823808	2.63428	FOXA1	ENST00000375413.4|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1 	ENST00000354297.4|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1 	ENST00000375422.2|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1
hg19_v2_chr14_-_70263979_70264009	2.62941	FOXA1	ENST00000216540.4|SLC10A1|ENSG00000100652.4|solute carrier family 10 (sodium/bile acid cotransporter), member 1
hg19_v2_chr9_+_27109133_27109187	2.62766	FOXA1	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr2_-_104496621_104496667	2.62265	FOXA1	ENST00000455716.1|AC013727.1|ENSG00000232597.1|AC013727.1
hg19_v2_chr7_-_81399438_81399514	2.61789	FOXA1	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr3_+_186692745_186692824	2.61777	FOXA1	ENST00000438590.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr6_-_41715128_41715142	2.60214	FOXA1	ENST00000356667.4|PGC|ENSG00000096088.12|progastricsin (pepsinogen C) 	ENST00000373025.3|PGC|ENSG00000096088.12|progastricsin (pepsinogen C) 	ENST00000425343.2|PGC|ENSG00000096088.12|progastricsin (pepsinogen C)
hg19_v2_chr4_-_70080449_70080449	2.50716	FOXA1	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr17_-_48546324_48546335	2.48728	FOXA1	ENST00000508540.1|CHAD|ENSG00000136457.5|chondroadherin
hg19_v2_chr1_-_111743285_111743332	2.46355	FOXA1	ENST00000357640.4|DENND2D|ENSG00000162777.12|DENN/MADD domain containing 2D
hg19_v2_chr15_-_55541227_55541246	2.36913	FOXA1	ENST00000566877.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr6_-_46922659_46922725	2.35633	FOXA1	ENST00000265417.7|GPR116|ENSG00000069122.14|G protein-coupled receptor 116
hg19_v2_chr18_+_66465475_66465652	2.31877	FOXA1	ENST00000581520.1|CCDC102B|ENSG00000150636.11|coiled-coil domain containing 102B
hg19_v2_chr12_-_89746173_89746188	2.31473	FOXA1	ENST00000308385.6|DUSP6|ENSG00000139318.7|dual specificity phosphatase 6
hg19_v2_chrX_-_15402498_15402515	2.2837	FOXA1	ENST00000297904.3|FIGF|ENSG00000165197.4|c-fos induced growth factor (vascular endothelial growth factor D)
hg19_v2_chr7_-_81399329_81399347	2.27972	FOXA1	ENST00000453411.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor) 	ENST00000444829.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr17_-_48546232_48546267	2.27245	FOXA1	ENST00000258969.4|CHAD|ENSG00000136457.5|chondroadherin
hg19_v2_chr13_-_46716969_46717015	2.20537	FOXA1	ENST00000435666.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr21_+_17791648_17791775	2.17311	FOXA1	ENST00000602892.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000418813.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000435697.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr8_+_126442563_126442624	2.16195	FOXA1	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr14_-_36983034_36983064	2.1528	FOXA1	ENST00000518529.2|SFTA3|ENSG00000229415.5|surfactant associated 3
hg19_v2_chr7_-_81399355_81399373	2.13027	FOXA1	ENST00000457544.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr15_+_71389281_71389306	2.11467	FOXA1	ENST00000355327.3|THSD4|ENSG00000187720.10|thrombospondin, type I, domain containing 4
hg19_v2_chr4_+_55095428_55095475	2.09426	FOXA1	ENST00000508170.1|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide 	ENST00000512143.1|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr10_+_124320195_124320216	2.05321	FOXA1	ENST00000359586.6|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr12_+_103981044_103981061	2.03714	FOXA1	ENST00000388887.2|STAB2|ENSG00000136011.10|stabilin 2
hg19_v2_chr2_-_21266816_21266849	2.01545	FOXA1	ENST00000399256.4|APOB|ENSG00000084674.9|apolipoprotein B
hg19_v2_chr6_-_90025011_90025020	1.99938	FOXA1	ENST00000402938.3|GABRR2|ENSG00000111886.9|gamma-aminobutyric acid (GABA) A receptor, rho 2
hg19_v2_chr10_-_81708854_81708867	1.99527	FOXA1	ENST00000372292.3|SFTPD|ENSG00000133661.11|surfactant protein D
hg19_v2_chr6_-_90024967_90024993	1.96822	FOXA1	ENST00000602399.1|GABRR2|ENSG00000111886.9|gamma-aminobutyric acid (GABA) A receptor, rho 2
hg19_v2_chr12_+_27849378_27849428	1.964	FOXA1	ENST00000310791.2|REP15|ENSG00000174236.2|RAB15 effector protein
hg19_v2_chr21_+_17791838_17791869	1.94347	FOXA1	ENST00000453910.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr21_+_17443521_17443553	1.92789	FOXA1	ENST00000456342.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr12_-_71551652_71551679	1.91899	FOXA1	ENST00000546561.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr19_-_49118067_49118079	1.91449	FOXA1	ENST00000593772.1|FAM83E|ENSG00000105523.3|family with sequence similarity 83, member E
hg19_v2_chr7_+_134576317_134576374	1.90052	FOXA1	ENST00000424922.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000495522.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr21_+_17792672_17792775	1.8974	FOXA1	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr3_+_52245458_52245468	1.86598	FOXA1	ENST00000459884.1|ALAS1|ENSG00000023330.10|aminolevulinate, delta-, synthase 1
hg19_v2_chr3_-_145878954_145878979	1.86364	FOXA1	ENST00000282903.5|PLOD2|ENSG00000152952.7|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 	ENST00000360060.3|PLOD2|ENSG00000152952.7|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
hg19_v2_chr3_+_142315225_142315290	1.85874	FOXA1	ENST00000457734.2|PLS1|ENSG00000120756.8|plastin 1 	ENST00000483373.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000475296.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000495744.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000476044.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000461644.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr1_+_223101757_223101776	1.85686	FOXA1	ENST00000284476.6|DISP1|ENSG00000154309.7|dispatched homolog 1 (Drosophila)
hg19_v2_chr9_+_136287444_136287514	1.79874	FOXA1	ENST00000355699.2|ADAMTS13|ENSG00000160323.14|ADAM metallopeptidase with thrombospondin type 1 motif, 13 	ENST00000356589.2|ADAMTS13|ENSG00000160323.14|ADAM metallopeptidase with thrombospondin type 1 motif, 13 	ENST00000371911.3|ADAMTS13|ENSG00000160323.14|ADAM metallopeptidase with thrombospondin type 1 motif, 13
hg19_v2_chr7_+_80231466_80231529	1.777	FOXA1	ENST00000309881.7|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000534394.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr12_-_89746264_89746284	1.7595	FOXA1	ENST00000548755.1|DUSP6|ENSG00000139318.7|dual specificity phosphatase 6
hg19_v2_chr2_+_88047606_88047606	1.7427	FOXA1	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr7_-_81399411_81399432	1.7392	FOXA1	ENST00000423064.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr4_-_111119804_111119832	1.73656	FOXA1	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr12_-_71551868_71551882	1.72312	FOXA1	ENST00000247829.3|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr7_-_81399678_81399714	1.72074	FOXA1	ENST00000412881.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr21_-_40033618_40033712	1.71694	FOXA1	ENST00000417133.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398910.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000442448.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr9_-_95186739_95186763	1.7035	FOXA1	ENST00000375550.4|OMD|ENSG00000127083.7|osteomodulin
hg19_v2_chr7_-_81399287_81399323	1.70168	FOXA1	ENST00000354224.6|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr21_-_43771226_43771242	1.69565	FOXA1	ENST00000291526.4|TFF2|ENSG00000160181.4|trefoil factor 2
hg19_v2_chr13_+_78109804_78109815	1.68147	FOXA1	ENST00000535157.1|SCEL|ENSG00000136155.12|sciellin
hg19_v2_chr16_-_68034452_68034467	1.67991	FOXA1	ENST00000575510.1|DPEP2|ENSG00000167261.9|dipeptidase 2
hg19_v2_chr19_+_18492973_18492983	1.67553	FOXA1	ENST00000595973.2|GDF15|ENSG00000130513.6|growth differentiation factor 15
hg19_v2_chr3_+_174577070_174577136	1.67092	FOXA1	ENST00000454872.1|NAALADL2|ENSG00000177694.10|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v2_chr4_-_74486109_74486166	1.65629	FOXA1	ENST00000395777.2|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr6_+_10528560_10528589	1.64636	FOXA1	ENST00000379597.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr11_-_108464465_108464507	1.64029	FOXA1	ENST00000525344.1|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr11_-_108464321_108464380	1.6367	FOXA1	ENST00000265843.4|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr6_-_161085291_161085308	1.60713	FOXA1	ENST00000316300.5|LPA|ENSG00000198670.7|lipoprotein, Lp(a)
hg19_v2_chr5_-_121659052_121659068	1.59315	FOXA1	ENST00000512105.1|CTD-2544H17.1|ENSG00000249621.1|CTD-2544H17.1
hg19_v2_chr18_+_68002675_68002675	1.57613	FOXA1	ENST00000584919.1|RP11-41O4.1|ENSG00000266258.1|Uncharacterized protein
hg19_v2_chr1_-_95391315_95391357	1.56611	FOXA1	ENST00000545882.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000415017.1|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr2_-_182545603_182545603	1.54613	FOXA1	ENST00000295108.3|NEUROD1|ENSG00000162992.3|neuronal differentiation 1
hg19_v2_chr14_+_37126765_37126799	1.54148	FOXA1	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr17_+_72427477_72427667	1.5346	FOXA1	ENST00000342648.5|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C 	ENST00000481232.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr2_+_171640291_171640311	1.51942	FOXA1	ENST00000409885.1|ERICH2|ENSG00000204334.7|glutamate-rich 2
hg19_v2_chr18_+_66465302_66465324	1.51069	FOXA1	ENST00000360242.5|CCDC102B|ENSG00000150636.11|coiled-coil domain containing 102B 	ENST00000358653.5|CCDC102B|ENSG00000150636.11|coiled-coil domain containing 102B
hg19_v2_chr13_+_78109884_78109902	1.46231	FOXA1	ENST00000377246.3|SCEL|ENSG00000136155.12|sciellin 	ENST00000349847.3|SCEL|ENSG00000136155.12|sciellin
hg19_v2_chr5_-_148758839_148758861	1.44516	FOXA1	ENST00000261796.3|IL17B|ENSG00000127743.5|interleukin 17B
hg19_v2_chr14_+_38065052_38065052	1.44032	FOXA1	ENST00000556845.1|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr1_-_216596738_216596796	1.41129	FOXA1	ENST00000307340.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366943.2|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366942.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild)
hg19_v2_chr3_-_185538849_185538935	1.3882	FOXA1	ENST00000421047.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr15_+_59910132_59910144	1.38438	FOXA1	ENST00000559200.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v2_chr1_-_178840157_178840187	1.36599	FOXA1	ENST00000367629.1|ANGPTL1|ENSG00000116194.8|angiopoietin-like 1 	ENST00000234816.2|ANGPTL1|ENSG00000116194.8|angiopoietin-like 1
hg19_v2_chr7_+_116165754_116165813	1.36513	FOXA1	ENST00000405348.1|CAV1|ENSG00000105974.7|caveolin 1, caveolae protein, 22kDa
hg19_v2_chr7_-_81399744_81399761	1.35831	FOXA1	ENST00000421558.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr2_+_71162995_71163037	1.34779	FOXA1	ENST00000234396.4|ATP6V1B1|ENSG00000116039.7|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
hg19_v2_chr13_+_76334795_76334809	1.32219	FOXA1	ENST00000526202.1|LMO7|ENSG00000136153.15|LIM domain 7 	ENST00000465261.2|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr10_+_102891048_102891078	1.30367	FOXA1	ENST00000467928.2|TLX1|ENSG00000107807.8|T-cell leukemia homeobox 1
hg19_v2_chr21_+_17443434_17443515	1.29299	FOXA1	ENST00000400178.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr6_-_87804815_87804830	1.27062	FOXA1	ENST00000369582.2|CGA|ENSG00000135346.4|glycoprotein hormones, alpha polypeptide
hg19_v2_chr2_+_71163051_71163063	1.26607	FOXA1	ENST00000412314.1|ATP6V1B1|ENSG00000116039.7|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
hg19_v2_chr18_-_52626622_52626739	1.24341	FOXA1	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chr2_-_158345462_158345480	1.23478	FOXA1	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr13_+_76334567_76334582	1.21189	FOXA1	ENST00000321797.8|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr3_+_142315294_142315315	1.18678	FOXA1	ENST00000464320.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr3_+_160394940_160394954	1.18022	FOXA1	ENST00000320767.2|ARL14|ENSG00000179674.2|ADP-ribosylation factor-like 14
hg19_v2_chr12_+_121416437_121416479	1.17542	FOXA1	ENST00000402929.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A 	ENST00000535955.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A 	ENST00000538626.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A 	ENST00000543427.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A
hg19_v2_chr12_+_121416340_121416371	1.16718	FOXA1	ENST00000257555.6|HNF1A|ENSG00000135100.13|HNF1 homeobox A 	ENST00000400024.2|HNF1A|ENSG00000135100.13|HNF1 homeobox A
hg19_v2_chr6_-_108145499_108145532	1.1323	FOXA1	ENST00000369020.3|SCML4|ENSG00000146285.9|sex comb on midleg-like 4 (Drosophila) 	ENST00000369022.2|SCML4|ENSG00000146285.9|sex comb on midleg-like 4 (Drosophila)
hg19_v2_chr7_-_107443652_107443675	1.12927	FOXA1	ENST00000340010.5|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000422236.2|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000453332.1|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3
hg19_v2_chr14_-_104408032_104408032	1.12235	FOXA1	ENST00000455348.2|RD3L|ENSG00000227729.2|retinal degeneration 3-like
hg19_v2_chr11_+_844406_844448	1.09816	FOXA1	ENST00000397404.1|TSPAN4|ENSG00000214063.6|tetraspanin 4
hg19_v2_chr12_+_121416489_121416552	1.08415	FOXA1	ENST00000541395.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A 	ENST00000544413.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A
hg19_v2_chr6_+_135502466_135502489	1.084	FOXA1	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr2_-_158345341_158345449	1.07652	FOXA1	ENST00000435117.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr8_-_133772794_133772840	1.05785	FOXA1	ENST00000519187.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000523829.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000356838.3|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000377901.4|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000519304.1|TMEM71|ENSG00000165071.10|transmembrane protein 71
hg19_v2_chr10_-_90751038_90751147	1.03648	FOXA1	ENST00000458159.1|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta 	ENST00000415557.1|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta 	ENST00000458208.1|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr10_-_21806759_21806848	1.03304	FOXA1	ENST00000444772.3|SKIDA1|ENSG00000180592.12|SKI/DACH domain containing 1
hg19_v2_chrX_+_37865804_37865842	1.00173	FOXA1	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr17_-_17485731_17485795	1.00162	FOXA1	ENST00000395783.1|PEMT|ENSG00000133027.13|phosphatidylethanolamine N-methyltransferase
hg19_v2_chr17_-_39140549_39140579	0.999429	FOXA1	ENST00000377755.4|KRT40|ENSG00000204889.6|keratin 40
hg19_v2_chr3_+_72201910_72202085	0.994459	FOXA1	ENST00000469178.1|LINC00870|ENSG00000243083.1|long intergenic non-protein coding RNA 870 	ENST00000485404.1|LINC00870|ENSG00000243083.1|long intergenic non-protein coding RNA 870
hg19_v2_chr16_-_73178346_73178346	0.986255	FOXA1	ENST00000358463.2|C16orf47|ENSG00000197445.2|chromosome 16 open reading frame 47
hg19_v2_chr4_+_75174180_75174196	0.983622	FOXA1	ENST00000413830.1|EPGN|ENSG00000182585.5|epithelial mitogen
hg19_v2_chr4_-_74486347_74486348	0.961675	FOXA1	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr3_+_121902511_121902539	0.958184	FOXA1	ENST00000490131.1|CASR|ENSG00000036828.9|calcium-sensing receptor
hg19_v2_chr4_+_68424434_68424453	0.944774	FOXA1	ENST00000265404.2|STAP1|ENSG00000035720.3|signal transducing adaptor family member 1 	ENST00000396225.1|STAP1|ENSG00000035720.3|signal transducing adaptor family member 1
hg19_v2_chr10_-_23528745_23528745	0.914941	FOXA1	ENST00000376501.5|C10orf115|ENSG00000204566.6|chromosome 10 open reading frame 115
hg19_v2_chr7_+_134430212_134430237	0.912542	FOXA1	ENST00000436461.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr7_-_92855762_92855837	0.912259	FOXA1	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr19_-_48894104_48894170	0.900546	FOXA1	ENST00000597017.1|KDELR1|ENSG00000105438.4|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
hg19_v2_chr17_+_72426891_72427052	0.895823	FOXA1	ENST00000392627.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr7_-_77325545_77325591	0.853896	FOXA1	ENST00000447009.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000416650.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000440088.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000430801.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000398043.2|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1
hg19_v2_chr5_+_179921430_179921461	0.847372	FOXA1	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr6_+_139135648_139135679	0.827775	FOXA1	ENST00000541398.1|ECT2L|ENSG00000203734.7|epithelial cell transforming sequence 2 oncogene-like
hg19_v2_chr2_+_204801471_204801503	0.82511	FOXA1	ENST00000316386.6|ICOS|ENSG00000163600.8|inducible T-cell co-stimulator 	ENST00000435193.1|ICOS|ENSG00000163600.8|inducible T-cell co-stimulator
hg19_v2_chr1_+_94798754_94798823	0.812502	FOXA1	ENST00000418242.1|RP11-148B18.3|ENSG00000226835.1|RP11-148B18.3
hg19_v2_chr4_+_165675197_165675216	0.808774	FOXA1	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr4_-_186456766_186456794	0.796209	FOXA1	ENST00000284771.6|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr8_-_133772870_133772881	0.783431	FOXA1	ENST00000522334.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000519016.1|TMEM71|ENSG00000165071.10|transmembrane protein 71
hg19_v2_chr2_-_192711968_192711981	0.772011	FOXA1	ENST00000304141.4|SDPR|ENSG00000168497.4|serum deprivation response
hg19_v2_chr6_+_112375275_112375334	0.76188	FOXA1	ENST00000368666.2|WISP3|ENSG00000112761.14|WNT1 inducible signaling pathway protein 3 	ENST00000604763.1|WISP3|ENSG00000112761.14|WNT1 inducible signaling pathway protein 3 	ENST00000230529.5|WISP3|ENSG00000112761.14|WNT1 inducible signaling pathway protein 3
hg19_v2_chr2_-_87248975_87248975	0.759257	FOXA1	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chr19_+_39214797_39214939	0.756984	FOXA1	ENST00000440400.1|ACTN4|ENSG00000130402.7|actinin, alpha 4
hg19_v2_chr6_+_7108210_7108264	0.755013	FOXA1	ENST00000467782.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000334984.6|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000349384.6|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr12_-_48398104_48398269	0.753133	FOXA1	ENST00000337299.6|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1 	ENST00000380518.3|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1
hg19_v2_chr5_+_74011328_74011411	0.747879	FOXA1	ENST00000513336.1|HEXB|ENSG00000049860.9|hexosaminidase B (beta polypeptide)
hg19_v2_chr1_+_101361782_101361810	0.722432	FOXA1	ENST00000357650.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr4_-_186456652_186456668	0.720485	FOXA1	ENST00000284767.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3 	ENST00000284770.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr14_+_37131058_37131139	0.708238	FOXA1	ENST00000361487.6|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr2_+_202937972_202937988	0.698549	FOXA1	ENST00000541917.1|AC079354.1|ENSG00000182329.6|uncharacterized protein KIAA2012  	ENST00000295844.3|AC079354.1|ENSG00000182329.6|uncharacterized protein KIAA2012
hg19_v2_chr3_-_113897899_113897899	0.696794	FOXA1	ENST00000383673.2|DRD3|ENSG00000151577.8|dopamine receptor D3 	ENST00000295881.7|DRD3|ENSG00000151577.8|dopamine receptor D3
hg19_v2_chr4_+_124571409_124571447	0.693054	FOXA1	ENST00000514823.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091 	ENST00000511919.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091 	ENST00000508111.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091
hg19_v2_chr14_+_23299088_23299258	0.686074	FOXA1	ENST00000355151.5|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000397496.3|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000555345.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000432849.3|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000553711.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000556465.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000397505.2|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000557221.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000311892.6|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000556840.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000555536.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52
hg19_v2_chr1_-_11107280_11107304	0.682794	FOXA1	ENST00000400897.3|MASP2|ENSG00000009724.12|mannan-binding lectin serine peptidase 2 	ENST00000400898.3|MASP2|ENSG00000009724.12|mannan-binding lectin serine peptidase 2
hg19_v2_chr9_-_89562104_89562104	0.66398	FOXA1	ENST00000298743.7|GAS1|ENSG00000180447.5|growth arrest-specific 1
hg19_v2_chr10_+_115469134_115469144	0.65997	FOXA1	ENST00000452490.2|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr7_+_116654935_116654949	0.657754	FOXA1	ENST00000432298.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000422922.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr18_+_3449330_3449411	0.643726	FOXA1	ENST00000549253.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr5_-_135701164_135701225	0.641292	FOXA1	ENST00000355180.3|TRPC7|ENSG00000069018.13|transient receptor potential cation channel, subfamily C, member 7 	ENST00000426057.2|TRPC7|ENSG00000069018.13|transient receptor potential cation channel, subfamily C, member 7 	ENST00000513104.1|TRPC7|ENSG00000069018.13|transient receptor potential cation channel, subfamily C, member 7
hg19_v2_chr18_-_25616519_25616549	0.639565	FOXA1	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr17_-_27054952_27054959	0.624542	FOXA1	ENST00000580518.1|TLCD1|ENSG00000160606.6|TLC domain containing 1
hg19_v2_chr6_+_112375462_112375536	0.620464	FOXA1	ENST00000361714.1|WISP3|ENSG00000112761.14|WNT1 inducible signaling pathway protein 3
hg19_v2_chr6_-_117747015_117747048	0.610195	FOXA1	ENST00000368508.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase 	ENST00000368507.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase
hg19_v2_chr14_-_37051798_37051831	0.598779	FOXA1	ENST00000258829.5|NKX2-8|ENSG00000136327.6|NK2 homeobox 8
hg19_v2_chr12_+_21525818_21525862	0.597865	FOXA1	ENST00000240652.3|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000542023.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000537593.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide
hg19_v2_chr7_+_116654958_116655009	0.582555	FOXA1	ENST00000449366.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr13_+_76334498_76334507	0.572801	FOXA1	ENST00000534657.1|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr6_+_88054530_88054567	0.565223	FOXA1	ENST00000388923.4|C6orf163|ENSG00000203872.6|chromosome 6 open reading frame 163
hg19_v2_chr6_+_143929307_143929322	0.563723	FOXA1	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr19_-_45909585_45909625	0.560741	FOXA1	ENST00000593226.1|PPP1R13L|ENSG00000104881.10|protein phosphatase 1, regulatory subunit 13 like 	ENST00000418234.2|PPP1R13L|ENSG00000104881.10|protein phosphatase 1, regulatory subunit 13 like
hg19_v2_chr4_-_40516560_40516605	0.543241	FOXA1	ENST00000513473.1|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr6_+_33589161_33589172	0.536733	FOXA1	ENST00000605930.1|ITPR3|ENSG00000096433.6|inositol 1,4,5-trisphosphate receptor, type 3
hg19_v2_chr16_-_68034470_68034496	0.526436	FOXA1	ENST00000412757.2|DPEP2|ENSG00000167261.9|dipeptidase 2
hg19_v2_chr1_+_35225339_35225343	0.52382	FOXA1	ENST00000339480.1|GJB4|ENSG00000189433.5|gap junction protein, beta 4, 30.3kDa
hg19_v2_chr7_+_134832808_134832879	0.519469	FOXA1	ENST00000275767.3|TMEM140|ENSG00000146859.6|transmembrane protein 140
hg19_v2_chr20_+_31755934_31755974	0.515415	FOXA1	ENST00000354932.5|BPIFA2|ENSG00000131050.6|BPI fold containing family A, member 2
hg19_v2_chr20_+_306221_306239	0.51359	FOXA1	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr2_-_172017343_172017391	0.51095	FOXA1	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr12_+_96588279_96588323	0.496726	FOXA1	ENST00000552142.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr4_+_15376165_15376178	0.49072	FOXA1	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr22_-_17700260_17700331	0.481934	FOXA1	ENST00000399837.2|CECR1|ENSG00000093072.11|cat eye syndrome chromosome region, candidate 1 	ENST00000543038.1|CECR1|ENSG00000093072.11|cat eye syndrome chromosome region, candidate 1
hg19_v2_chr14_+_105267250_105267250	0.480673	FOXA1	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr17_+_9728828_9728868	0.479375	FOXA1	ENST00000262441.5|GLP2R|ENSG00000065325.8|glucagon-like peptide 2 receptor
hg19_v2_chr16_-_67517716_67517716	0.478838	FOXA1	ENST00000290953.2|AGRP|ENSG00000159723.4|agouti related protein homolog (mouse)
hg19_v2_chr9_-_14910420_14910434	0.477592	FOXA1	ENST00000380880.3|FREM1|ENSG00000164946.15|FRAS1 related extracellular matrix 1
hg19_v2_chr20_+_52105495_52105495	0.470126	FOXA1	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr9_-_20622478_20622542	0.468962	FOXA1	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr16_-_87970122_87970122	0.466537	FOXA1	ENST00000309893.2|CA5A|ENSG00000174990.3|carbonic anhydrase VA, mitochondrial
hg19_v2_chr5_+_138209688_138209727	0.464717	FOXA1	ENST00000518381.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr1_+_214161854_214161892	0.463602	FOXA1	ENST00000435016.1|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr18_-_22931103_22931162	0.453325	FOXA1	ENST00000577461.1|ZNF521|ENSG00000198795.6|zinc finger protein 521
hg19_v2_chr8_+_55471630_55471714	0.450551	FOXA1	ENST00000522001.1|RP11-53M11.3|ENSG00000254142.2|RP11-53M11.3
hg19_v2_chr6_+_135502408_135502459	0.448941	FOXA1	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr21_-_38445011_38445200	0.43251	FOXA1	ENST00000464265.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399102.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr13_-_99910673_99910682	0.431249	FOXA1	ENST00000397473.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18 	ENST00000397470.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr2_+_173724771_173724840	0.430758	FOXA1	ENST00000538974.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4 	ENST00000540783.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr20_+_306177_306211	0.41942	FOXA1	ENST00000544632.1|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr6_+_1080164_1080164	0.417971	FOXA1	ENST00000314040.1|AL033381.1|ENSG00000176515.1|Uncharacterized protein; cDNA FLJ34594 fis, clone KIDNE2009109
hg19_v2_chr15_+_60296421_60296464	0.417472	FOXA1	ENST00000396057.4|FOXB1|ENSG00000171956.5|forkhead box B1
hg19_v2_chr21_-_28215332_28215347	0.411162	FOXA1	ENST00000517777.1|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr8_-_59412717_59412795	0.410681	FOXA1	ENST00000301645.3|CYP7A1|ENSG00000167910.3|cytochrome P450, family 7, subfamily A, polypeptide 1
hg19_v2_chr13_-_99910620_99910660	0.409199	FOXA1	ENST00000416594.1|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr12_+_96588143_96588185	0.40868	FOXA1	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr2_-_3521518_3521518	0.40342	FOXA1	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr6_+_26251835_26251879	0.396707	FOXA1	ENST00000356350.2|HIST1H2BH|ENSG00000197459.2|histone cluster 1, H2bh
hg19_v2_chr1_-_94079648_94079671	0.396056	FOXA1	ENST00000370247.3|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr6_-_159466136_159466184	0.395839	FOXA1	ENST00000367066.3|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein 	ENST00000326965.6|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr5_-_137674000_137674044	0.391208	FOXA1	ENST00000510119.1|CDC25C|ENSG00000158402.14|cell division cycle 25C 	ENST00000513970.1|CDC25C|ENSG00000158402.14|cell division cycle 25C
hg19_v2_chr10_+_99400443_99400497	0.389087	FOXA1	ENST00000370631.3|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha
hg19_v2_chr10_+_123923105_123923160	0.388074	FOXA1	ENST00000368999.1|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr13_-_31038370_31038509	0.382265	FOXA1	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chrX_+_135730297_135730352	0.380427	FOXA1	ENST00000370629.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chr9_+_116343192_116343225	0.379397	FOXA1	ENST00000471324.2|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr2_-_152146385_152146571	0.376999	FOXA1	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr17_-_57229155_57229198	0.373696	FOXA1	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr4_-_140544386_140544413	0.353936	FOXA1	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr3_-_190167571_190167665	0.352962	FOXA1	ENST00000354905.2|TMEM207|ENSG00000198398.2|transmembrane protein 207
hg19_v2_chr10_-_32217717_32217781	0.348759	FOXA1	ENST00000396144.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375245.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000344936.2|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375250.5|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12
hg19_v2_chr6_-_89927151_89927156	0.346614	FOXA1	ENST00000454853.2|GABRR1|ENSG00000146276.7|gamma-aminobutyric acid (GABA) A receptor, rho 1
hg19_v2_chr9_-_14910990_14910995	0.342401	FOXA1	ENST00000380881.4|FREM1|ENSG00000164946.15|FRAS1 related extracellular matrix 1 	ENST00000422223.2|FREM1|ENSG00000164946.15|FRAS1 related extracellular matrix 1
hg19_v2_chr10_-_102890883_102890902	0.333268	FOXA1	ENST00000445873.1|TLX1NB|ENSG00000236311.2|TLX1 neighbor
hg19_v2_chr10_-_10504285_10504312	0.331833	FOXA1	ENST00000602311.1|RP11-271F18.4|ENSG00000270111.1|RP11-271F18.4
hg19_v2_chr6_+_7107999_7108054	0.331455	FOXA1	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr2_-_172017393_172017509	0.321884	FOXA1	ENST00000442919.2|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr3_-_194030493_194030600	0.30222	FOXA1	ENST00000456816.1|LINC00887|ENSG00000214145.2|long intergenic non-protein coding RNA 887 	ENST00000414120.1|LINC00887|ENSG00000214145.2|long intergenic non-protein coding RNA 887 	ENST00000429578.1|LINC00887|ENSG00000214145.2|long intergenic non-protein coding RNA 887
hg19_v2_chr9_-_5084580_5084580	0.301348	FOXA1	ENST00000601793.1|AL161450.1|ENSG00000268155.1|Uncharacterized protein
hg19_v2_chr3_+_141106643_141106681	0.301072	FOXA1	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr11_+_31833939_31833994	0.291805	FOXA1	ENST00000530348.1|RCN1|ENSG00000049449.4|reticulocalbin 1, EF-hand calcium binding domain
hg19_v2_chr8_+_39806685_39806685	0.289858	FOXA1	ENST00000389060.4|IDO2|ENSG00000188676.9|indoleamine 2,3-dioxygenase 2
hg19_v2_chr8_+_95907993_95908004	0.2807	FOXA1	ENST00000523378.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr5_+_150157444_150157508	0.279291	FOXA1	ENST00000526627.1|SMIM3|ENSG00000256235.1|small integral membrane protein 3
hg19_v2_chr1_-_246729544_246729626	0.275953	FOXA1	ENST00000544618.1|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial 	ENST00000366514.4|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial
hg19_v2_chr3_-_193272741_193272776	0.267117	FOXA1	ENST00000392443.3|ATP13A4|ENSG00000127249.10|ATPase type 13A4
hg19_v2_chr1_-_232651312_232651312	0.263323	FOXA1	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr17_+_4613918_4614000	0.234045	FOXA1	ENST00000574954.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000346341.2|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000572457.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000381488.6|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000412477.3|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000571428.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000575877.1|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr6_-_31550192_31550207	0.233858	FOXA1	ENST00000429299.2|LTB|ENSG00000227507.2|lymphotoxin beta (TNF superfamily, member 3) 	ENST00000446745.2|LTB|ENSG00000227507.2|lymphotoxin beta (TNF superfamily, member 3)
hg19_v2_chr9_-_71161505_71161544	0.231314	FOXA1	ENST00000446290.1|RP11-274B18.2|ENSG00000234506.1|RP11-274B18.2
hg19_v2_chrX_+_22050546_22050583	0.227538	FOXA1	ENST00000379374.4|PHEX|ENSG00000102174.7|phosphate regulating endopeptidase homolog, X-linked
hg19_v2_chr11_+_71249071_71249071	0.225901	FOXA1	ENST00000398534.3|KRTAP5-8|ENSG00000241233.1|keratin associated protein 5-8
hg19_v2_chr12_-_68647281_68647387	0.225637	FOXA1	ENST00000328087.4|IL22|ENSG00000127318.6|interleukin 22 	ENST00000538666.1|IL22|ENSG00000127318.6|interleukin 22
hg19_v2_chrX_-_124097620_124097666	0.222556	FOXA1	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr21_-_16031122_16031152	0.220819	FOXA1	ENST00000400562.1|AF165138.7|ENSG00000243440.2|Protein LOC388813
hg19_v2_chr8_-_71316021_71316068	0.219394	FOXA1	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr1_+_198126209_198126251	0.210396	FOXA1	ENST00000367383.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr17_-_39471947_39471963	0.209239	FOXA1	ENST00000334202.3|KRTAP17-1|ENSG00000186860.3|keratin associated protein 17-1
hg19_v2_chr6_+_7107830_7107993	0.196645	FOXA1	ENST00000379933.3|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr14_-_64971288_64971316	0.194259	FOXA1	ENST00000394715.1|ZBTB25|ENSG00000089775.7|zinc finger and BTB domain containing 25
hg19_v2_chr21_+_17442799_17442853	0.188785	FOXA1	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr8_+_95908041_95908065	0.17341	FOXA1	ENST00000396113.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 	ENST00000519136.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr2_+_238877424_238877439	0.171079	FOXA1	ENST00000434655.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr6_+_90192974_90193122	0.167872	FOXA1	ENST00000520458.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chr10_+_104535994_104536014	0.164251	FOXA1	ENST00000369889.4|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr5_+_179921344_179921423	0.159005	FOXA1	ENST00000261951.4|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr2_-_233877912_233877982	0.155762	FOXA1	ENST00000264051.3|NGEF|ENSG00000066248.10|neuronal guanine nucleotide exchange factor
hg19_v2_chr5_-_41510656_41510713	0.150275	FOXA1	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr12_+_10365404_10365547	0.145363	FOXA1	ENST00000266458.5|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000421801.2|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000544284.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000545047.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000543602.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000545887.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1
hg19_v2_chr12_-_106697974_106698057	0.143897	FOXA1	ENST00000553039.1|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr1_-_43855479_43855486	0.142454	FOXA1	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr19_-_56047661_56047668	0.139116	FOXA1	ENST00000344158.3|SBK2|ENSG00000187550.4|SH3 domain binding kinase family, member 2
hg19_v2_chr14_-_24911448_24911659	0.138614	FOXA1	ENST00000555355.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000553343.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000556523.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000556249.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000538105.2|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000555225.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr8_-_116673894_116673913	0.1345	FOXA1	ENST00000395713.2|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chrX_+_37639302_37639326	0.132143	FOXA1	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr12_-_66275350_66275368	0.124963	FOXA1	ENST00000536648.1|RP11-366L20.2|ENSG00000197301.3|Uncharacterized protein
hg19_v2_chr1_-_177939348_177939395	0.121906	FOXA1	ENST00000464631.2|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr19_+_44037334_44037365	0.116187	FOXA1	ENST00000314228.5|ZNF575|ENSG00000176472.6|zinc finger protein 575
hg19_v2_chr1_+_61547894_61547980	0.115235	FOXA1	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr19_+_16178317_16178354	0.111049	FOXA1	ENST00000344824.6|TPM4|ENSG00000167460.10|tropomyosin 4 	ENST00000538887.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr11_+_1151573_1151627	0.110139	FOXA1	ENST00000534821.1|MUC5AC|ENSG00000215182.6|mucin 5AC, oligomeric mucus/gel-forming 	ENST00000356191.2|MUC5AC|ENSG00000215182.6|mucin 5AC, oligomeric mucus/gel-forming
hg19_v2_chr20_+_62795827_62795878	0.0861905	FOXA1	ENST00000328439.1|MYT1|ENSG00000196132.7|myelin transcription factor 1 	ENST00000536311.1|MYT1|ENSG00000196132.7|myelin transcription factor 1
hg19_v2_chr5_+_150157860_150157883	0.0849384	FOXA1	ENST00000600109.1|AC010441.1|ENSG00000269636.1|AC010441.1
hg19_v2_chr14_-_85705818_85705844	0.0750187	FOXA1	ENST00000556016.1|RP11-789A21.1|ENSG00000259044.1|RP11-789A21.1
hg19_v2_chr12_-_56123444_56123491	0.0730934	FOXA1	ENST00000546457.1|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000549117.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr1_-_43855444_43855478	0.0722356	FOXA1	ENST00000372455.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr18_+_72922710_72922733	0.0710419	FOXA1	ENST00000322038.5|TSHZ1|ENSG00000179981.9|teashirt zinc finger homeobox 1
hg19_v2_chrX_-_48814810_48814898	0.0694151	FOXA1	ENST00000376488.3|OTUD5|ENSG00000068308.9|OTU domain containing 5 	ENST00000396743.3|OTUD5|ENSG00000068308.9|OTU domain containing 5 	ENST00000156084.4|OTUD5|ENSG00000068308.9|OTU domain containing 5
hg19_v2_chr2_-_121223697_121223697	0.0653234	FOXA1	ENST00000593290.1|FLJ14816|ENSG00000268194.1|long intergenic non-protein coding RNA 1101
hg19_v2_chr6_+_106546808_106546833	0.0621276	FOXA1	ENST00000369089.3|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain
hg19_v2_chr12_-_56122761_56123004	0.0583128	FOXA1	ENST00000552164.1|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000420846.3|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000257857.4|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr17_+_4613776_4613792	0.0528388	FOXA1	ENST00000269260.2|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr16_-_4665023_4665047	0.0488727	FOXA1	ENST00000591897.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1
hg19_v2_chr4_-_135122903_135122954	0.0450905	FOXA1	ENST00000421491.3|PABPC4L|ENSG00000254535.2|poly(A) binding protein, cytoplasmic 4-like 	ENST00000529122.2|PABPC4L|ENSG00000254535.2|poly(A) binding protein, cytoplasmic 4-like
hg19_v2_chr2_+_173792893_173793009	0.0434632	FOXA1	ENST00000535187.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr21_+_17566867_17566899	0.0419788	FOXA1	ENST00000602505.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr15_+_38964048_38964101	0.0375841	FOXA1	ENST00000560203.1|RP11-275I4.2|ENSG00000259747.1|RP11-275I4.2	ENST00000557946.1|RP11-275I4.2|ENSG00000259747.1|RP11-275I4.2
hg19_v2_chr12_-_52828147_52828309	0.0321697	FOXA1	ENST00000252245.5|KRT75|ENSG00000170454.5|keratin 75
hg19_v2_chr17_+_72931876_72931897	0.0255387	FOXA1	ENST00000328801.4|OTOP3|ENSG00000182938.4|otopetrin 3
hg19_v2_chr8_-_9761693_9761730	0.00704067	FOXA1	ENST00000521863.1|LINC00599|ENSG00000253230.2|long intergenic non-protein coding RNA 599
hg19_v2_chr20_+_44420570_44420616	0.00659559	FOXA1	ENST00000372622.3|DNTTIP1|ENSG00000101457.8|deoxynucleotidyltransferase, terminal, interacting protein 1
