hg19_v2_chr11_+_62186498_62186515	10.7621	FOXA3_FOXC2	ENST00000278282.2|SCGB1A1|ENSG00000149021.2|secretoglobin, family 1A, member 1 (uteroglobin)
hg19_v2_chr8_+_120079478_120079499	8.67628	FOXA3_FOXC2	ENST00000332843.2|COLEC10|ENSG00000184374.2|collectin sub-family member 10 (C-type lectin)
hg19_v2_chr1_-_57431679_57431810	8.14177	FOXA3_FOXC2	ENST00000371237.4|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000535057.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000543257.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide
hg19_v2_chr17_-_26695013_26695033	7.0954	FOXA3_FOXC2	ENST00000555059.2|CTB-96E2.2|ENSG00000273171.1|Homeobox protein SEBOX
hg19_v2_chr17_-_26694979_26695007	7.02425	FOXA3_FOXC2	ENST00000438614.1|VTN|ENSG00000109072.9|vitronectin
hg19_v2_chr11_-_116708302_116708347	6.00136	FOXA3_FOXC2	ENST00000375320.1|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000359492.2|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000375329.2|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000375323.1|APOA1|ENSG00000118137.5|apolipoprotein A-I
hg19_v2_chr6_-_41715128_41715142	4.68853	FOXA3_FOXC2	ENST00000356667.4|PGC|ENSG00000096088.12|progastricsin (pepsinogen C) 	ENST00000373025.3|PGC|ENSG00000096088.12|progastricsin (pepsinogen C) 	ENST00000425343.2|PGC|ENSG00000096088.12|progastricsin (pepsinogen C)
hg19_v2_chr4_+_187187098_187187127	4.2088	FOXA3_FOXC2	ENST00000403665.2|F11|ENSG00000088926.9|coagulation factor XI 	ENST00000264692.4|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr2_+_128175997_128176020	3.87055	FOXA3_FOXC2	ENST00000234071.3|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000429925.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000442644.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000453608.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr13_-_86373536_86373623	3.73982	FOXA3_FOXC2	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr18_-_25616519_25616549	3.53067	FOXA3_FOXC2	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr1_+_207277590_207277620	3.49656	FOXA3_FOXC2	ENST00000367070.3|C4BPA|ENSG00000123838.6|complement component 4 binding protein, alpha
hg19_v2_chr20_+_31823792_31823808	3.48304	FOXA3_FOXC2	ENST00000375413.4|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1 	ENST00000354297.4|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1 	ENST00000375422.2|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1
hg19_v2_chr3_+_108855558_108855733	3.45831	FOXA3_FOXC2	ENST00000467240.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000477643.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000479039.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000593799.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1
hg19_v2_chr14_-_70263979_70264009	3.2627	FOXA3_FOXC2	ENST00000216540.4|SLC10A1|ENSG00000100652.4|solute carrier family 10 (sodium/bile acid cotransporter), member 1
hg19_v2_chr1_+_207277632_207277676	3.21864	FOXA3_FOXC2	ENST00000421786.1|C4BPA|ENSG00000123838.6|complement component 4 binding protein, alpha
hg19_v2_chr3_+_137717571_137717591	3.20109	FOXA3_FOXC2	ENST00000343735.4|CLDN18|ENSG00000066405.8|claudin 18
hg19_v2_chr5_-_41213123_41213190	3.18001	FOXA3_FOXC2	ENST00000417809.1|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr22_+_21128167_21128167	3.09146	FOXA3_FOXC2	ENST00000215727.5|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr14_-_36988882_36988898	3.03521	FOXA3_FOXC2	ENST00000498187.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr16_-_86542652_86542705	3.02233	FOXA3_FOXC2	ENST00000599749.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA
hg19_v2_chr17_-_19290483_19290553	2.9697	FOXA3_FOXC2	ENST00000395592.2|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4 	ENST00000299610.4|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4
hg19_v2_chr17_-_26697304_26697373	2.9556	FOXA3_FOXC2	ENST00000536498.1|VTN|ENSG00000109072.9|vitronectin
hg19_v2_chr10_+_71561649_71561703	2.87702	FOXA3_FOXC2	ENST00000398978.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000354547.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000357811.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr4_+_169013666_169013697	2.76457	FOXA3_FOXC2	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr2_+_88047606_88047606	2.57066	FOXA3_FOXC2	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr7_-_107443652_107443675	2.55623	FOXA3_FOXC2	ENST00000340010.5|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000422236.2|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000453332.1|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3
hg19_v2_chr2_+_135596180_135596193	2.54987	FOXA3_FOXC2	ENST00000283054.4|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase 	ENST00000392928.1|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr12_+_27849378_27849428	2.50991	FOXA3_FOXC2	ENST00000310791.2|REP15|ENSG00000174236.2|RAB15 effector protein
hg19_v2_chr14_-_94789663_94789731	2.48985	FOXA3_FOXC2	ENST00000557225.1|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 	ENST00000341584.3|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
hg19_v2_chr10_+_71561630_71561644	2.43279	FOXA3_FOXC2	ENST00000398974.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398971.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398968.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398966.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398964.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398969.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000356340.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398972.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398973.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr14_-_38064198_38064239	2.42535	FOXA3_FOXC2	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr17_-_39684550_39684567	2.40429	FOXA3_FOXC2	ENST00000455635.1|KRT19|ENSG00000171345.9|keratin 19 	ENST00000361566.3|KRT19|ENSG00000171345.9|keratin 19
hg19_v2_chr5_-_41213607_41213697	2.39859	FOXA3_FOXC2	ENST00000337836.5|C6|ENSG00000039537.9|complement component 6 	ENST00000433294.1|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr7_+_142829162_142829176	2.30862	FOXA3_FOXC2	ENST00000291009.3|PIP|ENSG00000159763.3|prolactin-induced protein
hg19_v2_chr20_+_31870927_31870969	2.29205	FOXA3_FOXC2	ENST00000253354.1|BPIFB1|ENSG00000125999.6|BPI fold containing family B, member 1
hg19_v2_chr4_-_71532207_71532244	2.27197	FOXA3_FOXC2	ENST00000543780.1|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides 	ENST00000391614.3|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr4_+_187187337_187187369	2.26386	FOXA3_FOXC2	ENST00000492972.2|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr4_+_74269956_74270025	2.25993	FOXA3_FOXC2	ENST00000295897.4|ALB|ENSG00000163631.12|albumin 	ENST00000415165.2|ALB|ENSG00000163631.12|albumin 	ENST00000503124.1|ALB|ENSG00000163631.12|albumin 	ENST00000509063.1|ALB|ENSG00000163631.12|albumin 	ENST00000401494.3|ALB|ENSG00000163631.12|albumin
hg19_v2_chr4_+_187148556_187148687	2.2391	FOXA3_FOXC2	ENST00000264690.6|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000446598.2|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000414291.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000513864.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1
hg19_v2_chr3_+_137728842_137728952	2.22507	FOXA3_FOXC2	ENST00000183605.5|CLDN18|ENSG00000066405.8|claudin 18
hg19_v2_chr16_-_86542455_86542500	2.20545	FOXA3_FOXC2	ENST00000595886.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000597578.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000593604.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA
hg19_v2_chr2_+_135596106_135596137	2.19875	FOXA3_FOXC2	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr12_+_59989918_59989965	2.19342	FOXA3_FOXC2	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr2_+_113885138_113885181	2.16412	FOXA3_FOXC2	ENST00000409930.3|IL1RN|ENSG00000136689.14|interleukin 1 receptor antagonist
hg19_v2_chr4_-_71532668_71532695	2.10637	FOXA3_FOXC2	ENST00000510437.1|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr18_+_47088401_47088457	2.08546	FOXA3_FOXC2	ENST00000261292.4|LIPG|ENSG00000101670.7|lipase, endothelial 	ENST00000427224.2|LIPG|ENSG00000101670.7|lipase, endothelial 	ENST00000580036.1|LIPG|ENSG00000101670.7|lipase, endothelial
hg19_v2_chr15_+_69857515_69857531	2.06333	FOXA3_FOXC2	ENST00000559477.1|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr4_-_71532601_71532662	2.04581	FOXA3_FOXC2	ENST00000510614.1|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr14_+_21156915_21156943	1.9955	FOXA3_FOXC2	ENST00000397990.4|ANG|ENSG00000214274.5|angiogenin, ribonuclease, RNase A family, 5 	ENST00000555597.1|RNASE4|ENSG00000258818.2|ribonuclease, RNase A family, 4
hg19_v2_chr10_+_71561704_71561874	1.94098	FOXA3_FOXC2	ENST00000520267.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr12_-_120765565_120765592	1.92849	FOXA3_FOXC2	ENST00000423423.3|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas) 	ENST00000308366.4|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas)
hg19_v2_chr5_+_147258266_147258280	1.80105	FOXA3_FOXC2	ENST00000296694.4|SCGB3A2|ENSG00000164265.4|secretoglobin, family 3A, member 2
hg19_v2_chr8_+_19171128_19171182	1.79189	FOXA3_FOXC2	ENST00000265807.3|SH2D4A|ENSG00000104611.7|SH2 domain containing 4A
hg19_v2_chr4_-_71532339_71532377	1.78225	FOXA3_FOXC2	ENST00000254801.4|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr1_+_200011711_200011752	1.77348	FOXA3_FOXC2	ENST00000544748.1|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr10_-_118032697_118032796	1.76389	FOXA3_FOXC2	ENST00000439649.3|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chrX_-_15402498_15402515	1.74867	FOXA3_FOXC2	ENST00000297904.3|FIGF|ENSG00000165197.4|c-fos induced growth factor (vascular endothelial growth factor D)
hg19_v2_chr8_+_19171196_19171216	1.70839	FOXA3_FOXC2	ENST00000518040.1|SH2D4A|ENSG00000104611.7|SH2 domain containing 4A
hg19_v2_chr2_-_165424973_165425010	1.68634	FOXA3_FOXC2	ENST00000543549.1|GRB14|ENSG00000115290.5|growth factor receptor-bound protein 14
hg19_v2_chr10_-_118032979_118033132	1.66703	FOXA3_FOXC2	ENST00000355422.6|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr14_+_38065052_38065052	1.66668	FOXA3_FOXC2	ENST00000556845.1|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr16_-_48281305_48281419	1.661	FOXA3_FOXC2	ENST00000356608.2|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr9_-_95186739_95186763	1.63186	FOXA3_FOXC2	ENST00000375550.4|OMD|ENSG00000127083.7|osteomodulin
hg19_v2_chr2_-_105030466_105030489	1.61046	FOXA3_FOXC2	ENST00000449772.1|AC068535.3|ENSG00000225765.1|AC068535.3
hg19_v2_chr1_-_169555779_169555826	1.60447	FOXA3_FOXC2	ENST00000367797.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor) 	ENST00000367796.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr12_-_92539614_92539673	1.59392	FOXA3_FOXC2	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr4_-_72649763_72649802	1.57961	FOXA3_FOXC2	ENST00000513476.1|GC|ENSG00000145321.8|group-specific component (vitamin D binding protein)
hg19_v2_chr7_+_134576317_134576374	1.55387	FOXA3_FOXC2	ENST00000424922.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000495522.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr2_+_74120094_74120142	1.53631	FOXA3_FOXC2	ENST00000409731.3|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000345517.3|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000409918.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000442912.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000409624.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric
hg19_v2_chr10_-_81708854_81708867	1.53521	FOXA3_FOXC2	ENST00000372292.3|SFTPD|ENSG00000133661.11|surfactant protein D
hg19_v2_chr12_-_21487829_21487856	1.52593	FOXA3_FOXC2	ENST00000445053.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2 	ENST00000452078.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2 	ENST00000458504.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2 	ENST00000422327.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2 	ENST00000421294.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2
hg19_v2_chr7_-_81399438_81399514	1.50538	FOXA3_FOXC2	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr15_+_96869165_96869183	1.49054	FOXA3_FOXC2	ENST00000421109.2|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr17_-_57229155_57229198	1.46892	FOXA3_FOXC2	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr14_-_106791536_106791536	1.4613	FOXA3_FOXC2	ENST00000390613.2|IGHV3-30|ENSG00000211953.2|immunoglobulin heavy variable 3-30
hg19_v2_chr21_+_17792672_17792775	1.46042	FOXA3_FOXC2	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr8_+_97597148_97597173	1.4475	FOXA3_FOXC2	ENST00000521590.1|SDC2|ENSG00000169439.7|syndecan 2
hg19_v2_chr4_+_15376165_15376178	1.44524	FOXA3_FOXC2	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr3_+_119316721_119316739	1.42962	FOXA3_FOXC2	ENST00000488919.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A 	ENST00000495992.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr12_+_13044787_13044908	1.42763	FOXA3_FOXC2	ENST00000534831.1|GPRC5A|ENSG00000013588.5|G protein-coupled receptor, family C, group 5, member A
hg19_v2_chr1_-_146696901_146696974	1.41814	FOXA3_FOXC2	ENST00000369272.3|FMO5|ENSG00000131781.8|flavin containing monooxygenase 5 	ENST00000441068.2|FMO5|ENSG00000131781.8|flavin containing monooxygenase 5
hg19_v2_chr18_-_52626622_52626739	1.40063	FOXA3_FOXC2	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chrX_+_105936982_105937024	1.39795	FOXA3_FOXC2	ENST00000418562.1|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr6_+_142623758_142623795	1.38117	FOXA3_FOXC2	ENST00000541199.1|GPR126|ENSG00000112414.10|G protein-coupled receptor 126 	ENST00000435011.2|GPR126|ENSG00000112414.10|G protein-coupled receptor 126
hg19_v2_chr2_+_7865923_7865941	1.3804	FOXA3_FOXC2	ENST00000417930.1|AC092580.4|ENSG00000235576.1|AC092580.4
hg19_v2_chr7_-_81399355_81399373	1.33963	FOXA3_FOXC2	ENST00000457544.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chrX_-_70329118_70329194	1.33617	FOXA3_FOXC2	ENST00000374188.3|IL2RG|ENSG00000147168.8|interleukin 2 receptor, gamma
hg19_v2_chr20_-_7921090_7921121	1.32368	FOXA3_FOXC2	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr10_+_124320156_124320181	1.3124	FOXA3_FOXC2	ENST00000338354.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000344338.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000330163.4|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368909.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368955.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368956.2|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr7_-_81399329_81399347	1.30516	FOXA3_FOXC2	ENST00000453411.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor) 	ENST00000444829.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr6_+_161123270_161123278	1.3051	FOXA3_FOXC2	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr20_-_7238861_7238933	1.29321	FOXA3_FOXC2	ENST00000428954.1|RP11-19D2.1|ENSG00000238102.1|RP11-19D2.1
hg19_v2_chr13_-_39564993_39565002	1.28546	FOXA3_FOXC2	ENST00000423210.1|STOML3|ENSG00000133115.7|stomatin (EPB72)-like 3
hg19_v2_chr7_-_107643567_107643657	1.27589	FOXA3_FOXC2	ENST00000393559.1|LAMB1|ENSG00000091136.9|laminin, beta 1 	ENST00000439976.1|LAMB1|ENSG00000091136.9|laminin, beta 1 	ENST00000393560.1|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr7_-_81399411_81399432	1.25958	FOXA3_FOXC2	ENST00000423064.2|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr3_+_119316689_119316710	1.25906	FOXA3_FOXC2	ENST00000273371.4|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr17_+_8924837_8924872	1.25356	FOXA3_FOXC2	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr21_+_17791648_17791775	1.24469	FOXA3_FOXC2	ENST00000602892.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000418813.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000435697.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr18_+_56113488_56113507	1.24346	FOXA3_FOXC2	ENST00000590797.1|RP11-1151B14.3|ENSG00000267391.1|RP11-1151B14.3
hg19_v2_chr6_-_161085291_161085308	1.23732	FOXA3_FOXC2	ENST00000316300.5|LPA|ENSG00000198670.7|lipoprotein, Lp(a)
hg19_v2_chr5_+_101569696_101569696	1.21748	FOXA3_FOXC2	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr7_-_107643674_107643700	1.20805	FOXA3_FOXC2	ENST00000222399.6|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr15_-_76352069_76352145	1.20509	FOXA3_FOXC2	ENST00000305435.10|NRG4|ENSG00000169752.12|neuregulin 4 	ENST00000563910.1|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr18_+_68002675_68002675	1.18119	FOXA3_FOXC2	ENST00000584919.1|RP11-41O4.1|ENSG00000266258.1|Uncharacterized protein
hg19_v2_chr9_-_4299874_4299916	1.1786	FOXA3_FOXC2	ENST00000381971.3|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3 	ENST00000477901.1|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3
hg19_v2_chr1_-_169555709_169555730	1.17314	FOXA3_FOXC2	ENST00000546081.1|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr6_+_44310376_44310413	1.16906	FOXA3_FOXC2	ENST00000515220.1|SPATS1|ENSG00000249481.2|spermatogenesis associated, serine-rich 1 	ENST00000323108.8|SPATS1|ENSG00000249481.2|spermatogenesis associated, serine-rich 1
hg19_v2_chr21_+_17791838_17791869	1.16174	FOXA3_FOXC2	ENST00000453910.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr12_-_21927736_21927768	1.15071	FOXA3_FOXC2	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr10_+_71562180_71562291	1.14822	FOXA3_FOXC2	ENST00000517713.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000522165.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000520133.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr3_+_132316081_132316102	1.14425	FOXA3_FOXC2	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr14_-_25479811_25479846	1.13669	FOXA3_FOXC2	ENST00000550887.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr3_+_114012819_114012833	1.12681	FOXA3_FOXC2	ENST00000383671.3|TIGIT|ENSG00000181847.7|T cell immunoreceptor with Ig and ITIM domains
hg19_v2_chr2_+_171640291_171640311	1.11981	FOXA3_FOXC2	ENST00000409885.1|ERICH2|ENSG00000204334.7|glutamate-rich 2
hg19_v2_chr7_+_134464414_134464429	1.11247	FOXA3_FOXC2	ENST00000361901.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr11_-_58378759_58378759	1.10921	FOXA3_FOXC2	ENST00000601906.1|AP001350.1|ENSG00000269570.1|Uncharacterized protein
hg19_v2_chr7_-_81399678_81399714	1.10485	FOXA3_FOXC2	ENST00000412881.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr15_+_58430368_58430401	1.10098	FOXA3_FOXC2	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr14_-_36990354_36990397	1.08665	FOXA3_FOXC2	ENST00000518149.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr15_+_58430567_58430589	1.07075	FOXA3_FOXC2	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr11_-_108464465_108464507	1.06879	FOXA3_FOXC2	ENST00000525344.1|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr15_+_69854027_69854062	1.06573	FOXA3_FOXC2	ENST00000498938.2|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr7_-_81399287_81399323	1.06437	FOXA3_FOXC2	ENST00000354224.6|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr12_-_15038779_15038860	1.06303	FOXA3_FOXC2	ENST00000228938.5|MGP|ENSG00000111341.5|matrix Gla protein 	ENST00000539261.1|MGP|ENSG00000111341.5|matrix Gla protein
hg19_v2_chr5_-_137674000_137674044	1.06175	FOXA3_FOXC2	ENST00000510119.1|CDC25C|ENSG00000158402.14|cell division cycle 25C 	ENST00000513970.1|CDC25C|ENSG00000158402.14|cell division cycle 25C
hg19_v2_chr16_-_48281444_48281479	1.06044	FOXA3_FOXC2	ENST00000537808.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11 	ENST00000569991.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr14_+_38033252_38033405	1.05722	FOXA3_FOXC2	ENST00000554829.1|RP11-356O9.1|ENSG00000258414.1|RP11-356O9.1
hg19_v2_chr6_+_139135648_139135679	1.05321	FOXA3_FOXC2	ENST00000541398.1|ECT2L|ENSG00000203734.7|epithelial cell transforming sequence 2 oncogene-like
hg19_v2_chr2_-_188312971_188312987	1.05221	FOXA3_FOXC2	ENST00000410068.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000447403.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000410102.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like
hg19_v2_chr4_-_103266626_103266647	1.04265	FOXA3_FOXC2	ENST00000356736.4|SLC39A8|ENSG00000138821.8|solute carrier family 39 (zinc transporter), member 8
hg19_v2_chr11_-_108464321_108464380	1.02714	FOXA3_FOXC2	ENST00000265843.4|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr12_+_59989791_59989874	1.00009	FOXA3_FOXC2	ENST00000552432.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr20_+_45338126_45338303	0.995706	FOXA3_FOXC2	ENST00000359271.2|SLC2A10|ENSG00000197496.4|solute carrier family 2 (facilitated glucose transporter), member 10
hg19_v2_chr12_-_21928515_21928544	0.979752	FOXA3_FOXC2	ENST00000537950.1|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chrX_+_135614293_135614318	0.970373	FOXA3_FOXC2	ENST00000370634.3|VGLL1|ENSG00000102243.8|vestigial like 1 (Drosophila)
hg19_v2_chr4_-_186696636_186696676	0.944268	FOXA3_FOXC2	ENST00000444771.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr2_-_21266935_21266951	0.933951	FOXA3_FOXC2	ENST00000233242.1|APOB|ENSG00000084674.9|apolipoprotein B
hg19_v2_chr4_-_152149033_152149182	0.925329	FOXA3_FOXC2	ENST00000514152.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19
hg19_v2_chr4_-_186696561_186696634	0.924649	FOXA3_FOXC2	ENST00000445115.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000451701.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000457247.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000435480.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000425679.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000457934.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chrX_+_135730297_135730352	0.923943	FOXA3_FOXC2	ENST00000370629.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chr1_-_177939041_177939053	0.920347	FOXA3_FOXC2	ENST00000308284.6|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr7_+_134576151_134576171	0.912865	FOXA3_FOXC2	ENST00000393118.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr2_-_87248975_87248975	0.899891	FOXA3_FOXC2	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chr5_-_115872124_115872139	0.89375	FOXA3_FOXC2	ENST00000515009.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr4_-_186696425_186696452	0.889494	FOXA3_FOXC2	ENST00000430503.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319454.6|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000450341.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr10_+_124320195_124320216	0.886758	FOXA3_FOXC2	ENST00000359586.6|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr11_-_57158109_57158130	0.877128	FOXA3_FOXC2	ENST00000525955.1|PRG2|ENSG00000186652.5|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 	ENST00000533605.1|PRG2|ENSG00000186652.5|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 	ENST00000311862.5|PRG2|ENSG00000186652.5|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)
hg19_v2_chr6_+_44310421_44310486	0.8763	FOXA3_FOXC2	ENST00000288390.2|SPATS1|ENSG00000249481.2|spermatogenesis associated, serine-rich 1
hg19_v2_chr3_+_177159695_177159709	0.873584	FOXA3_FOXC2	ENST00000442937.1|LINC00578|ENSG00000228221.1|long intergenic non-protein coding RNA 578
hg19_v2_chr12_-_7596735_7596781	0.869365	FOXA3_FOXC2	ENST00000416109.2|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000396630.1|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000313599.3|CD163L1|ENSG00000177675.4|CD163 molecule-like 1
hg19_v2_chr21_-_43786634_43786703	0.868937	FOXA3_FOXC2	ENST00000291527.2|TFF1|ENSG00000160182.2|trefoil factor 1
hg19_v2_chr6_-_159466136_159466184	0.868804	FOXA3_FOXC2	ENST00000367066.3|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein 	ENST00000326965.6|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr17_-_66951474_66951550	0.858902	FOXA3_FOXC2	ENST00000269080.2|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chr12_-_102591604_102591623	0.847753	FOXA3_FOXC2	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr4_+_15341442_15341589	0.83956	FOXA3_FOXC2	ENST00000397700.2|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000295297.4|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr17_-_38020392_38020477	0.837631	FOXA3_FOXC2	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr7_-_81399744_81399761	0.821202	FOXA3_FOXC2	ENST00000421558.1|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr1_+_74701062_74701099	0.807261	FOXA3_FOXC2	ENST00000326637.3|TNNI3K|ENSG00000116783.10|TNNI3 interacting kinase
hg19_v2_chr7_+_134430212_134430237	0.805058	FOXA3_FOXC2	ENST00000436461.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr2_-_180427304_180427323	0.788428	FOXA3_FOXC2	ENST00000336917.5|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr19_-_47157914_47157980	0.786836	FOXA3_FOXC2	ENST00000300875.4|DACT3|ENSG00000197380.6|dishevelled-binding antagonist of beta-catenin 3
hg19_v2_chr7_+_73242490_73242532	0.780348	FOXA3_FOXC2	ENST00000431918.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr4_+_75174180_75174196	0.739646	FOXA3_FOXC2	ENST00000413830.1|EPGN|ENSG00000182585.5|epithelial mitogen
hg19_v2_chr17_-_77967433_77967526	0.734438	FOXA3_FOXC2	ENST00000571872.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr2_-_21266816_21266849	0.731242	FOXA3_FOXC2	ENST00000399256.4|APOB|ENSG00000084674.9|apolipoprotein B
hg19_v2_chr17_-_38020379_38020390	0.73019	FOXA3_FOXC2	ENST00000351680.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000346243.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000350532.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000467757.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439016.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr14_+_37126765_37126799	0.722821	FOXA3_FOXC2	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr11_-_102401469_102401488	0.713181	FOXA3_FOXC2	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr2_-_208030647_208030689	0.708849	FOXA3_FOXC2	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr3_+_177159744_177159791	0.707296	FOXA3_FOXC2	ENST00000439009.1|LINC00578|ENSG00000228221.1|long intergenic non-protein coding RNA 578
hg19_v2_chr15_+_75940218_75940298	0.695529	FOXA3_FOXC2	ENST00000308527.5|SNX33|ENSG00000173548.8|sorting nexin 33
hg19_v2_chr16_+_20775358_20775386	0.686706	FOXA3_FOXC2	ENST00000440284.2|ACSM3|ENSG00000005187.7|acyl-CoA synthetase medium-chain family member 3
hg19_v2_chr7_+_134464376_134464413	0.680375	FOXA3_FOXC2	ENST00000454108.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000361675.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr1_-_178840157_178840187	0.678779	FOXA3_FOXC2	ENST00000367629.1|ANGPTL1|ENSG00000116194.8|angiopoietin-like 1 	ENST00000234816.2|ANGPTL1|ENSG00000116194.8|angiopoietin-like 1
hg19_v2_chr3_+_142315225_142315290	0.676635	FOXA3_FOXC2	ENST00000457734.2|PLS1|ENSG00000120756.8|plastin 1 	ENST00000483373.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000475296.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000495744.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000476044.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000461644.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr2_+_169659121_169659157	0.670804	FOXA3_FOXC2	ENST00000397206.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking 	ENST00000397209.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking 	ENST00000421711.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking
hg19_v2_chr17_+_7487146_7487211	0.665973	FOXA3_FOXC2	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr14_-_104408032_104408032	0.648555	FOXA3_FOXC2	ENST00000455348.2|RD3L|ENSG00000227729.2|retinal degeneration 3-like
hg19_v2_chr4_-_186696515_186696542	0.64684	FOXA3_FOXC2	ENST00000456596.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000414724.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chrX_-_101410762_101411029	0.642854	FOXA3_FOXC2	ENST00000543160.1|BEX5|ENSG00000184515.6|brain expressed, X-linked 5 	ENST00000333643.3|BEX5|ENSG00000184515.6|brain expressed, X-linked 5
hg19_v2_chr8_+_55528627_55528631	0.637845	FOXA3_FOXC2	ENST00000220676.1|RP1|ENSG00000104237.6|retinitis pigmentosa 1 (autosomal dominant)
hg19_v2_chr1_+_115642293_115642304	0.636546	FOXA3_FOXC2	ENST00000448680.1|RP4-666F24.3|ENSG00000233730.1|RP4-666F24.3
hg19_v2_chr7_-_117512264_117512281	0.634328	FOXA3_FOXC2	ENST00000454375.1|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr6_-_112575912_112575931	0.633592	FOXA3_FOXC2	ENST00000522006.1|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000230538.7|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000519932.1|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr11_-_115375107_115375283	0.633244	FOXA3_FOXC2	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr14_+_23299088_23299258	0.63185	FOXA3_FOXC2	ENST00000355151.5|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000397496.3|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000555345.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000432849.3|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000553711.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000556465.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000397505.2|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000557221.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000311892.6|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000556840.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52 	ENST00000555536.1|MRPL52|ENSG00000172590.14|mitochondrial ribosomal protein L52
hg19_v2_chr6_+_122793058_122793087	0.629711	FOXA3_FOXC2	ENST00000392491.2|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta
hg19_v2_chr6_-_112575838_112575849	0.624778	FOXA3_FOXC2	ENST00000455073.1|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr6_-_25830785_25830844	0.612936	FOXA3_FOXC2	ENST00000468082.1|SLC17A1|ENSG00000124568.6|solute carrier family 17 (organic anion transporter), member 1
hg19_v2_chr10_+_75668916_75668948	0.605866	FOXA3_FOXC2	ENST00000481390.1|PLAU|ENSG00000122861.11|plasminogen activator, urokinase
hg19_v2_chr20_+_9049303_9049454	0.600911	FOXA3_FOXC2	ENST00000407043.2|PLCB4|ENSG00000101333.12|phospholipase C, beta 4 	ENST00000441846.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr6_-_112575758_112575802	0.600755	FOXA3_FOXC2	ENST00000431543.2|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000453937.2|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000368638.4|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000389463.4|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr8_+_75736761_75736777	0.597142	FOXA3_FOXC2	ENST00000260113.2|PI15|ENSG00000137558.3|peptidase inhibitor 15
hg19_v2_chr6_+_21666633_21666681	0.587948	FOXA3_FOXC2	ENST00000606851.1|CASC15|ENSG00000272168.1|cancer susceptibility candidate 15 (non-protein coding)
hg19_v2_chr2_+_169658928_169659113	0.586746	FOXA3_FOXC2	ENST00000317647.7|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking 	ENST00000445023.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking
hg19_v2_chr3_-_116163830_116163855	0.584419	FOXA3_FOXC2	ENST00000333617.4|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr1_+_214163033_214163073	0.575245	FOXA3_FOXC2	ENST00000607425.1|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr9_-_70490107_70490246	0.570367	FOXA3_FOXC2	ENST00000377395.4|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000429800.2|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000430059.2|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000377384.1|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000382405.3|CBWD5|ENSG00000147996.12|COBW domain containing 5
hg19_v2_chr6_+_10528560_10528589	0.569096	FOXA3_FOXC2	ENST00000379597.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr3_+_167584414_167584445	0.567998	FOXA3_FOXC2	ENST00000475324.1|RP11-298O21.2|ENSG00000240292.1|RP11-298O21.2
hg19_v2_chr2_-_161056802_161056815	0.564607	FOXA3_FOXC2	ENST00000283249.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409872.1|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr2_+_179318295_179318295	0.56114	FOXA3_FOXC2	ENST00000442710.1|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr16_-_87970122_87970122	0.559098	FOXA3_FOXC2	ENST00000309893.2|CA5A|ENSG00000174990.3|carbonic anhydrase VA, mitochondrial
hg19_v2_chr11_-_85397167_85397320	0.550384	FOXA3_FOXC2	ENST00000316398.3|CCDC89|ENSG00000179071.3|coiled-coil domain containing 89
hg19_v2_chr12_-_102872317_102872429	0.545065	FOXA3_FOXC2	ENST00000424202.2|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr1_+_104293028_104293028	0.544167	FOXA3_FOXC2	ENST00000370079.3|AMY1C|ENSG00000187733.6|amylase, alpha 1C (salivary)
hg19_v2_chr6_-_26056695_26056701	0.53723	FOXA3_FOXC2	ENST00000343677.2|HIST1H1C|ENSG00000187837.2|histone cluster 1, H1c
hg19_v2_chr11_+_20044096_20044116	0.532829	FOXA3_FOXC2	ENST00000533917.1|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr7_-_121944491_121944705	0.524021	FOXA3_FOXC2	ENST00000331178.4|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000427185.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000442488.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1
hg19_v2_chr20_+_52105495_52105495	0.519375	FOXA3_FOXC2	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr7_-_22259845_22259864	0.517457	FOXA3_FOXC2	ENST00000420196.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chrX_+_90689810_90689826	0.517066	FOXA3_FOXC2	ENST00000312600.3|PABPC5|ENSG00000174740.7|poly(A) binding protein, cytoplasmic 5
hg19_v2_chr8_-_59412717_59412795	0.516939	FOXA3_FOXC2	ENST00000301645.3|CYP7A1|ENSG00000167910.3|cytochrome P450, family 7, subfamily A, polypeptide 1
hg19_v2_chr17_-_26733604_26733648	0.514731	FOXA3_FOXC2	ENST00000584426.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000584995.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr21_-_43771226_43771242	0.511153	FOXA3_FOXC2	ENST00000291526.4|TFF2|ENSG00000160181.4|trefoil factor 2
hg19_v2_chr11_+_8040739_8040815	0.510506	FOXA3_FOXC2	ENST00000534099.1|TUB|ENSG00000166402.4|tubby bipartite transcription factor
hg19_v2_chr6_+_125524785_125524861	0.510346	FOXA3_FOXC2	ENST00000392482.2|TPD52L1|ENSG00000111907.16|tumor protein D52-like 1
hg19_v2_chr20_+_44519948_44519986	0.504567	FOXA3_FOXC2	ENST00000354880.5|CTSA|ENSG00000064601.12|cathepsin A 	ENST00000191018.5|CTSA|ENSG00000064601.12|cathepsin A
hg19_v2_chr9_+_4839762_4839779	0.502961	FOXA3_FOXC2	ENST00000448872.2|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1 	ENST00000441844.1|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1
hg19_v2_chr20_+_9049742_9049765	0.500306	FOXA3_FOXC2	ENST00000437503.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chrX_+_135730373_135730399	0.491224	FOXA3_FOXC2	ENST00000370628.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chr17_-_6947225_6947253	0.488923	FOXA3_FOXC2	ENST00000574600.1|SLC16A11|ENSG00000174326.7|solute carrier family 16, member 11 	ENST00000308009.1|SLC16A11|ENSG00000174326.7|solute carrier family 16, member 11 	ENST00000447225.1|SLC16A11|ENSG00000174326.7|solute carrier family 16, member 11
hg19_v2_chr14_+_52164820_52164841	0.485492	FOXA3_FOXC2	ENST00000554167.1|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr9_+_67977438_67977438	0.484061	FOXA3_FOXC2	ENST00000456982.1|RP11-195B21.3|ENSG00000155282.7|Protein LOC644249
hg19_v2_chr6_-_135818368_135818386	0.475403	FOXA3_FOXC2	ENST00000367798.2|AHI1|ENSG00000135541.16|Abelson helper integration site 1
hg19_v2_chr6_-_131211534_131211564	0.467762	FOXA3_FOXC2	ENST00000456097.2|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr8_-_6420930_6420957	0.461474	FOXA3_FOXC2	ENST00000325203.5|ANGPT2|ENSG00000091879.9|angiopoietin 2
hg19_v2_chr12_+_94071129_94071175	0.454748	FOXA3_FOXC2	ENST00000552983.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000332896.3|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000552033.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000548483.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v2_chr4_+_118955635_118955655	0.454343	FOXA3_FOXC2	ENST00000433996.2|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr2_-_208030295_208030332	0.449636	FOXA3_FOXC2	ENST00000458272.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chrX_+_65382381_65382392	0.445604	FOXA3_FOXC2	ENST00000519389.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr4_-_186570679_186570760	0.439416	FOXA3_FOXC2	ENST00000451974.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr6_-_112575687_112575755	0.425903	FOXA3_FOXC2	ENST00000521398.1|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000424408.2|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000243219.3|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr20_+_44520009_44520020	0.420892	FOXA3_FOXC2	ENST00000607482.1|CTSA|ENSG00000064601.12|cathepsin A 	ENST00000372459.2|CTSA|ENSG00000064601.12|cathepsin A
hg19_v2_chr4_-_186456766_186456794	0.417765	FOXA3_FOXC2	ENST00000284771.6|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr2_-_161056762_161056799	0.412254	FOXA3_FOXC2	ENST00000428609.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409967.2|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chrX_+_65382433_65382486	0.407791	FOXA3_FOXC2	ENST00000374727.3|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr15_+_96904487_96904487	0.405107	FOXA3_FOXC2	ENST00000600790.1|AC087477.1|ENSG00000268484.1|Uncharacterized protein
hg19_v2_chr5_-_121659052_121659068	0.399963	FOXA3_FOXC2	ENST00000512105.1|CTD-2544H17.1|ENSG00000249621.1|CTD-2544H17.1
hg19_v2_chr5_-_115872142_115872154	0.395313	FOXA3_FOXC2	ENST00000510263.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr12_+_94071341_94071493	0.394459	FOXA3_FOXC2	ENST00000542893.2|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v2_chr7_-_121784285_121784350	0.391132	FOXA3_FOXC2	ENST00000417368.2|AASS|ENSG00000008311.10|aminoadipate-semialdehyde synthase
hg19_v2_chr14_-_99737565_99737617	0.390328	FOXA3_FOXC2	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr10_+_35484053_35484076	0.389262	FOXA3_FOXC2	ENST00000487763.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000473940.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000488328.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000356917.5|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr5_-_36242119_36242381	0.386364	FOXA3_FOXC2	ENST00000511088.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000282512.3|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000506945.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial
hg19_v2_chr9_+_112852477_112852514	0.385035	FOXA3_FOXC2	ENST00000480388.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr13_-_99910620_99910660	0.382203	FOXA3_FOXC2	ENST00000416594.1|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr8_-_80993010_80993073	0.378273	FOXA3_FOXC2	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr15_-_40600026_40600061	0.376569	FOXA3_FOXC2	ENST00000456256.2|PLCB2|ENSG00000137841.7|phospholipase C, beta 2 	ENST00000557821.1|PLCB2|ENSG00000137841.7|phospholipase C, beta 2
hg19_v2_chr4_-_140223670_140223705	0.375562	FOXA3_FOXC2	ENST00000394228.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 	ENST00000539387.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr17_+_79213039_79213106	0.374453	FOXA3_FOXC2	ENST00000431388.2|C17orf89|ENSG00000224877.3|chromosome 17 open reading frame 89
hg19_v2_chr10_-_49482907_49482941	0.371361	FOXA3_FOXC2	ENST00000374201.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2 	ENST00000407470.4|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr4_+_118955500_118955612	0.369984	FOXA3_FOXC2	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr15_+_63188009_63188017	0.36768	FOXA3_FOXC2	ENST00000557900.1|RP11-1069G10.2|ENSG00000259727.1|RP11-1069G10.2
hg19_v2_chr17_+_7476136_7476160	0.365482	FOXA3_FOXC2	ENST00000582169.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000578754.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000578495.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000293831.8|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000380512.5|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000585024.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000583802.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000577269.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000584784.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000582746.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1
hg19_v2_chr15_-_40600111_40600166	0.364446	FOXA3_FOXC2	ENST00000543785.2|PLCB2|ENSG00000137841.7|phospholipase C, beta 2 	ENST00000260402.3|PLCB2|ENSG00000137841.7|phospholipase C, beta 2
hg19_v2_chr17_-_79212884_79212895	0.363406	FOXA3_FOXC2	ENST00000300714.3|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr22_+_46449674_46449774	0.36307	FOXA3_FOXC2	ENST00000381051.2|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr17_-_79212825_79212865	0.362844	FOXA3_FOXC2	ENST00000374769.2|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr4_-_186682716_186682745	0.359584	FOXA3_FOXC2	ENST00000445343.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr16_+_77233294_77233341	0.358194	FOXA3_FOXC2	ENST00000378644.4|SYCE1L|ENSG00000205078.5|synaptonemal complex central element protein 1-like
hg19_v2_chr1_-_8075693_8075757	0.351342	FOXA3_FOXC2	ENST00000467067.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1
hg19_v2_chr1_+_104198640_104198640	0.35023	FOXA3_FOXC2	ENST00000422549.1|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr3_+_148447887_148447911	0.343305	FOXA3_FOXC2	ENST00000475347.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000474935.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000461609.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1
hg19_v2_chr17_-_66951382_66951411	0.34312	FOXA3_FOXC2	ENST00000586539.1|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chr17_-_39324424_39324474	0.335664	FOXA3_FOXC2	ENST00000391356.2|KRTAP4-3|ENSG00000196156.3|keratin associated protein 4-3
hg19_v2_chr1_-_177939348_177939395	0.331219	FOXA3_FOXC2	ENST00000464631.2|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr2_-_207078086_207078106	0.329784	FOXA3_FOXC2	ENST00000442134.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr12_-_53207842_53207907	0.328673	FOXA3_FOXC2	ENST00000458244.2|KRT4|ENSG00000170477.8|keratin 4
hg19_v2_chr22_-_30867973_30868036	0.325107	FOXA3_FOXC2	ENST00000402286.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000401751.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000539629.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000403066.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000215812.4|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr7_-_17598506_17598533	0.324646	FOXA3_FOXC2	ENST00000451792.1|AC017060.1|ENSG00000226598.1|AC017060.1
hg19_v2_chr4_+_184826418_184826522	0.314974	FOXA3_FOXC2	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr17_+_72427477_72427667	0.313221	FOXA3_FOXC2	ENST00000342648.5|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C 	ENST00000481232.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr1_+_35225339_35225343	0.311912	FOXA3_FOXC2	ENST00000339480.1|GJB4|ENSG00000189433.5|gap junction protein, beta 4, 30.3kDa
hg19_v2_chr8_+_92261516_92261555	0.308018	FOXA3_FOXC2	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr21_-_15583165_15583170	0.307531	FOXA3_FOXC2	ENST00000536861.1|LIPI|ENSG00000188992.7|lipase, member I
hg19_v2_chr4_+_165675197_165675216	0.303712	FOXA3_FOXC2	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr3_+_142315294_142315315	0.298038	FOXA3_FOXC2	ENST00000464320.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr15_+_49462434_49462488	0.296805	FOXA3_FOXC2	ENST00000558145.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000543495.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000544523.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560138.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr4_-_41749724_41749795	0.29377	FOXA3_FOXC2	ENST00000510424.1|PHOX2B|ENSG00000109132.5|paired-like homeobox 2b
hg19_v2_chr17_-_41322332_41322420	0.293331	FOXA3_FOXC2	ENST00000590740.1|RP11-242D8.1|ENSG00000267002.1|RP11-242D8.1
hg19_v2_chr4_-_186456652_186456668	0.290535	FOXA3_FOXC2	ENST00000284767.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3 	ENST00000284770.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr4_-_116034979_116035046	0.287854	FOXA3_FOXC2	ENST00000264363.2|NDST4|ENSG00000138653.5|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg19_v2_chr6_-_117747015_117747048	0.287192	FOXA3_FOXC2	ENST00000368508.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase 	ENST00000368507.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase
hg19_v2_chr1_+_12806141_12806199	0.277632	FOXA3_FOXC2	ENST00000288048.5|C1orf158|ENSG00000157330.5|chromosome 1 open reading frame 158
hg19_v2_chr3_+_171561127_171561306	0.272783	FOXA3_FOXC2	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr2_-_65593784_65593817	0.269872	FOXA3_FOXC2	ENST00000443619.2|SPRED2|ENSG00000198369.5|sprouty-related, EVH1 domain containing 2
hg19_v2_chr4_-_70080449_70080449	0.2629	FOXA3_FOXC2	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr12_-_122018346_122018389	0.261408	FOXA3_FOXC2	ENST00000377069.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr12_+_58087901_58087947	0.260606	FOXA3_FOXC2	ENST00000315970.7|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000547079.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000439210.2|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000389146.6|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000413095.2|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000551035.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000257966.8|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000435406.2|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000550372.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin 	ENST00000389142.5|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin
hg19_v2_chr4_+_89206076_89206103	0.256877	FOXA3_FOXC2	ENST00000500009.2|RP11-10L7.1|ENSG00000246375.2|RP11-10L7.1
hg19_v2_chr12_+_58087738_58087891	0.256745	FOXA3_FOXC2	ENST00000552285.1|OS9|ENSG00000135506.11|osteosarcoma amplified 9, endoplasmic reticulum lectin
hg19_v2_chr21_-_31588365_31588398	0.256133	FOXA3_FOXC2	ENST00000399899.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr4_-_74486109_74486166	0.251814	FOXA3_FOXC2	ENST00000395777.2|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr7_-_111424506_111424539	0.248523	FOXA3_FOXC2	ENST00000450156.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000494651.2|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr22_-_39268308_39268319	0.248029	FOXA3_FOXC2	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr1_-_223308098_223308225	0.246904	FOXA3_FOXC2	ENST00000342210.6|TLR5|ENSG00000187554.7|toll-like receptor 5
hg19_v2_chr9_-_37034028_37034157	0.246882	FOXA3_FOXC2	ENST00000520281.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000446742.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000522003.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523145.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000414447.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377847.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377853.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377852.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523241.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000520154.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000358127.4|PAX5|ENSG00000196092.8|paired box 5
hg19_v2_chr1_+_159141397_159141549	0.246323	FOXA3_FOXC2	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr16_-_67597789_67597861	0.243339	FOXA3_FOXC2	ENST00000605277.1|CTD-2012K14.6|ENSG00000261386.2|CTD-2012K14.6
hg19_v2_chr3_-_99833333_99833357	0.243219	FOXA3_FOXC2	ENST00000354552.3|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000331335.5|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000398326.2|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr4_-_138453606_138453673	0.241041	FOXA3_FOXC2	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr11_-_6790286_6790286	0.240127	FOXA3_FOXC2	ENST00000338569.2|OR2AG2|ENSG00000188124.2|olfactory receptor, family 2, subfamily AG, member 2
hg19_v2_chr8_-_71157595_71157616	0.237101	FOXA3_FOXC2	ENST00000519724.1|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr17_-_46688334_46688385	0.232383	FOXA3_FOXC2	ENST00000239165.7|HOXB7|ENSG00000260027.3|homeobox B7
hg19_v2_chr8_-_16424871_16425011	0.231233	FOXA3_FOXC2	ENST00000518026.1|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
hg19_v2_chr12_+_96588143_96588185	0.228788	FOXA3_FOXC2	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr4_+_146403912_146403972	0.225549	FOXA3_FOXC2	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr14_-_99737822_99737861	0.222976	FOXA3_FOXC2	ENST00000345514.2|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein) 	ENST00000443726.2|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr4_-_123377880_123377880	0.21944	FOXA3_FOXC2	ENST00000226730.4|IL2|ENSG00000109471.4|interleukin 2
hg19_v2_chr7_-_111424462_111424496	0.218299	FOXA3_FOXC2	ENST00000437129.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr4_-_74486217_74486273	0.217421	FOXA3_FOXC2	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr1_-_167522982_167523017	0.217409	FOXA3_FOXC2	ENST00000370509.4|CREG1|ENSG00000143162.7|cellular repressor of E1A-stimulated genes 1
hg19_v2_chr14_-_21058982_21058982	0.212158	FOXA3_FOXC2	ENST00000556526.1|RNASE12|ENSG00000258436.1|ribonuclease, RNase A family, 12 (non-active)
hg19_v2_chr8_+_39806685_39806685	0.208479	FOXA3_FOXC2	ENST00000389060.4|IDO2|ENSG00000188676.9|indoleamine 2,3-dioxygenase 2
hg19_v2_chr13_+_95364963_95364978	0.207954	FOXA3_FOXC2	ENST00000438290.2|SOX21-AS1|ENSG00000227640.2|SOX21 antisense RNA 1 (head to head)
hg19_v2_chr15_+_49462397_49462430	0.207902	FOXA3_FOXC2	ENST00000396509.2|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr12_+_21525818_21525862	0.20704	FOXA3_FOXC2	ENST00000240652.3|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000542023.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000537593.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide
hg19_v2_chr21_-_28215332_28215347	0.206723	FOXA3_FOXC2	ENST00000517777.1|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr7_-_142511084_142511121	0.202225	FOXA3_FOXC2	ENST00000417977.2|TRBV30|ENSG00000237254.2|T cell receptor beta variable 30 (gene/pseudogene)
hg19_v2_chr3_-_133969673_133969735	0.199339	FOXA3_FOXC2	ENST00000427044.2|RYK|ENSG00000163785.8|receptor-like tyrosine kinase
hg19_v2_chr4_+_75174204_75174251	0.194719	FOXA3_FOXC2	ENST00000332112.4|EPGN|ENSG00000182585.5|epithelial mitogen 	ENST00000514968.1|EPGN|ENSG00000182585.5|epithelial mitogen 	ENST00000503098.1|EPGN|ENSG00000182585.5|epithelial mitogen 	ENST00000502358.1|EPGN|ENSG00000182585.5|epithelial mitogen 	ENST00000509145.1|EPGN|ENSG00000182585.5|epithelial mitogen 	ENST00000505212.1|EPGN|ENSG00000182585.5|epithelial mitogen
hg19_v2_chr4_+_184365744_184365797	0.193151	FOXA3_FOXC2	ENST00000504169.1|CDKN2AIP|ENSG00000168564.5|CDKN2A interacting protein 	ENST00000302350.4|CDKN2AIP|ENSG00000168564.5|CDKN2A interacting protein
hg19_v2_chr10_-_126849626_126849633	0.191297	FOXA3_FOXC2	ENST00000530884.1|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr4_-_140223614_140223668	0.190861	FOXA3_FOXC2	ENST00000394223.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr3_+_159570722_159570733	0.189697	FOXA3_FOXC2	ENST00000482804.1|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr3_+_141106643_141106681	0.188713	FOXA3_FOXC2	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr12_-_11139511_11139511	0.185392	FOXA3_FOXC2	ENST00000506868.1|TAS2R50|ENSG00000212126.3|taste receptor, type 2, member 50
hg19_v2_chr13_-_99910673_99910682	0.185141	FOXA3_FOXC2	ENST00000397473.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18 	ENST00000397470.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr21_-_31588338_31588357	0.182499	FOXA3_FOXC2	ENST00000286809.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr20_+_9049682_9049710	0.182401	FOXA3_FOXC2	ENST00000334005.3|PLCB4|ENSG00000101333.12|phospholipase C, beta 4 	ENST00000378473.3|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr17_-_39140549_39140579	0.179455	FOXA3_FOXC2	ENST00000377755.4|KRT40|ENSG00000204889.6|keratin 40
hg19_v2_chr9_+_116343192_116343225	0.171258	FOXA3_FOXC2	ENST00000471324.2|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr7_+_116654935_116654949	0.170381	FOXA3_FOXC2	ENST00000432298.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7 	ENST00000422922.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr3_-_168864315_168864356	0.167281	FOXA3_FOXC2	ENST00000475754.1|MECOM|ENSG00000085276.13|MDS1 and EVI1 complex locus 	ENST00000484519.1|MECOM|ENSG00000085276.13|MDS1 and EVI1 complex locus
hg19_v2_chr21_-_32931290_32931341	0.165651	FOXA3_FOXC2	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr12_+_96588279_96588323	0.159736	FOXA3_FOXC2	ENST00000552142.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr5_+_140710061_140710252	0.151271	FOXA3_FOXC2	ENST00000517417.1|PCDHGA1|ENSG00000204956.4|protocadherin gamma subfamily A, 1 	ENST00000378105.3|PCDHGA1|ENSG00000204956.4|protocadherin gamma subfamily A, 1
hg19_v2_chr9_+_70856397_70856397	0.151261	FOXA3_FOXC2	ENST00000360171.6|CBWD3|ENSG00000196873.11|COBW domain containing 3
hg19_v2_chr6_+_47666275_47666296	0.150883	FOXA3_FOXC2	ENST00000327753.3|GPR115|ENSG00000153294.7|G protein-coupled receptor 115 	ENST00000283303.2|GPR115|ENSG00000153294.7|G protein-coupled receptor 115
hg19_v2_chr1_-_246729544_246729626	0.150235	FOXA3_FOXC2	ENST00000544618.1|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial 	ENST00000366514.4|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial
hg19_v2_chr12_-_56326402_56326424	0.149894	FOXA3_FOXC2	ENST00000547925.1|WIBG|ENSG00000170473.12|within bgcn homolog (Drosophila)
hg19_v2_chr3_+_132843652_132843709	0.147145	FOXA3_FOXC2	ENST00000508711.1|TMEM108|ENSG00000144868.9|transmembrane protein 108
hg19_v2_chr2_-_182545603_182545603	0.145521	FOXA3_FOXC2	ENST00000295108.3|NEUROD1|ENSG00000162992.3|neuronal differentiation 1
hg19_v2_chr6_-_159466042_159466066	0.144626	FOXA3_FOXC2	ENST00000338313.5|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr6_+_52051171_52051185	0.137824	FOXA3_FOXC2	ENST00000340057.1|IL17A|ENSG00000112115.5|interleukin 17A
hg19_v2_chr3_-_139195350_139195370	0.137292	FOXA3_FOXC2	ENST00000232217.2|RBP2|ENSG00000114113.2|retinol binding protein 2, cellular
hg19_v2_chr4_+_57138437_57138570	0.137207	FOXA3_FOXC2	ENST00000504228.1|KIAA1211|ENSG00000109265.8|KIAA1211 	ENST00000541073.1|KIAA1211|ENSG00000109265.8|KIAA1211
hg19_v2_chr14_-_21562648_21562659	0.136946	FOXA3_FOXC2	ENST00000555270.1|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr1_+_73771844_73771922	0.134833	FOXA3_FOXC2	ENST00000440762.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000444827.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000415686.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000411903.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1
hg19_v2_chr19_+_13906250_13906274	0.134588	FOXA3_FOXC2	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr3_-_107941230_107941417	0.13422	FOXA3_FOXC2	ENST00000264538.3|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr8_+_95907993_95908004	0.131543	FOXA3_FOXC2	ENST00000523378.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr19_+_782755_782833	0.130999	FOXA3_FOXC2	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr9_+_132044730_132044797	0.129762	FOXA3_FOXC2	ENST00000455981.1|RP11-344B5.2|ENSG00000224307.1|RP11-344B5.2
hg19_v2_chr4_+_124571409_124571447	0.129084	FOXA3_FOXC2	ENST00000514823.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091 	ENST00000511919.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091 	ENST00000508111.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091
hg19_v2_chr6_-_87804815_87804830	0.125515	FOXA3_FOXC2	ENST00000369582.2|CGA|ENSG00000135346.4|glycoprotein hormones, alpha polypeptide
hg19_v2_chr2_-_106054952_106054977	0.125235	FOXA3_FOXC2	ENST00000336660.5|FHL2|ENSG00000115641.14|four and a half LIM domains 2 	ENST00000393352.3|FHL2|ENSG00000115641.14|four and a half LIM domains 2 	ENST00000607522.1|FHL2|ENSG00000115641.14|four and a half LIM domains 2
hg19_v2_chr6_+_26251835_26251879	0.124379	FOXA3_FOXC2	ENST00000356350.2|HIST1H2BH|ENSG00000197459.2|histone cluster 1, H2bh
hg19_v2_chr15_+_71185148_71185214	0.120904	FOXA3_FOXC2	ENST00000443425.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560755.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr4_+_172734548_172734654	0.115509	FOXA3_FOXC2	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr1_+_150488205_150488251	0.111364	FOXA3_FOXC2	ENST00000416894.1|LINC00568|ENSG00000228126.1|long intergenic non-protein coding RNA 568
hg19_v2_chr15_-_50411412_50411437	0.110618	FOXA3_FOXC2	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr14_-_85705818_85705844	0.110094	FOXA3_FOXC2	ENST00000556016.1|RP11-789A21.1|ENSG00000259044.1|RP11-789A21.1
hg19_v2_chr12_+_48099858_48099877	0.106901	FOXA3_FOXC2	ENST00000547799.1|RP1-197B17.3|ENSG00000257433.1|RP1-197B17.3
hg19_v2_chr4_-_88450244_88450287	0.106709	FOXA3_FOXC2	ENST00000503414.1|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin)
hg19_v2_chr5_+_179921430_179921461	0.10437	FOXA3_FOXC2	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr1_-_43855479_43855486	0.0974974	FOXA3_FOXC2	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr1_+_172389836_172389874	0.0946026	FOXA3_FOXC2	ENST00000460397.2|C1orf105|ENSG00000180999.6|chromosome 1 open reading frame 105
hg19_v2_chr1_-_43855444_43855478	0.0945347	FOXA3_FOXC2	ENST00000372455.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr4_-_74486347_74486348	0.091917	FOXA3_FOXC2	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr15_-_59041768_59041950	0.090289	FOXA3_FOXC2	ENST00000402627.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000396140.2|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000559053.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000561288.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr4_-_88449771_88449925	0.0900018	FOXA3_FOXC2	ENST00000535835.1|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin)
hg19_v2_chr4_-_138453559_138453572	0.0894264	FOXA3_FOXC2	ENST00000511115.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr5_+_74807581_74807724	0.0874049	FOXA3_FOXC2	ENST00000241436.4|POLK|ENSG00000122008.11|polymerase (DNA directed) kappa 	ENST00000352007.5|POLK|ENSG00000122008.11|polymerase (DNA directed) kappa
hg19_v2_chrX_+_26156460_26156460	0.0859531	FOXA3_FOXC2	ENST00000325250.1|MAGEB18|ENSG00000176774.5|melanoma antigen family B, 18
hg19_v2_chr15_+_59910132_59910144	0.0847829	FOXA3_FOXC2	ENST00000559200.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v2_chr12_-_119199461_119199508	0.079431	FOXA3_FOXC2	ENST00000536572.1|RP11-3L23.2|ENSG00000256750.1|RP11-3L23.2	ENST00000542577.1|RP11-3L23.2|ENSG00000256750.1|RP11-3L23.2
hg19_v2_chr17_-_26733179_26733237	0.0769126	FOXA3_FOXC2	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr9_+_131062367_131062367	0.0767036	FOXA3_FOXC2	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr14_+_74034310_74034345	0.0761947	FOXA3_FOXC2	ENST00000538782.1|ACOT2|ENSG00000119673.10|acyl-CoA thioesterase 2
hg19_v2_chr9_-_75567962_75567979	0.0753155	FOXA3_FOXC2	ENST00000297785.3|ALDH1A1|ENSG00000165092.8|aldehyde dehydrogenase 1 family, member A1 	ENST00000376939.1|ALDH1A1|ENSG00000165092.8|aldehyde dehydrogenase 1 family, member A1
hg19_v2_chr12_+_120740119_120740124	0.0733378	FOXA3_FOXC2	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4 	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg19_v2_chr2_-_39456673_39456673	0.0719681	FOXA3_FOXC2	ENST00000378803.1|CDKL4|ENSG00000205111.4|cyclin-dependent kinase-like 4 	ENST00000395035.3|CDKL4|ENSG00000205111.4|cyclin-dependent kinase-like 4
hg19_v2_chr11_+_4608021_4608021	0.0716094	FOXA3_FOXC2	ENST00000312614.4|OR52I2|ENSG00000226288.1|olfactory receptor, family 52, subfamily I, member 2
hg19_v2_chr18_-_31803435_31803515	0.0713113	FOXA3_FOXC2	ENST00000589544.1|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000269185.4|NOL4|ENSG00000101746.11|nucleolar protein 4 	ENST00000261592.5|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chrX_-_54069576_54069627	0.0701674	FOXA3_FOXC2	ENST00000445025.1|PHF8|ENSG00000172943.14|PHD finger protein 8 	ENST00000322659.8|PHF8|ENSG00000172943.14|PHD finger protein 8
hg19_v2_chr20_+_11898507_11898565	0.0697782	FOXA3_FOXC2	ENST00000378226.2|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr8_+_95908041_95908065	0.0681136	FOXA3_FOXC2	ENST00000396113.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 	ENST00000519136.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr1_-_54405773_54405874	0.0679516	FOXA3_FOXC2	ENST00000371376.1|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr1_+_239882842_239882850	0.0670094	FOXA3_FOXC2	ENST00000448020.1|CHRM3|ENSG00000133019.7|cholinergic receptor, muscarinic 3
hg19_v2_chr2_+_66918558_66918580	0.0646477	FOXA3_FOXC2	ENST00000435389.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000428590.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000412944.1|AC007392.3|ENSG00000232046.2|AC007392.3
hg19_v2_chr8_+_21777159_21777221	0.0644236	FOXA3_FOXC2	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr3_-_168864427_168864464	0.0641738	FOXA3_FOXC2	ENST00000468789.1|MECOM|ENSG00000085276.13|MDS1 and EVI1 complex locus
hg19_v2_chr7_-_115670804_115670867	0.0628132	FOXA3_FOXC2	ENST00000320239.7|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr8_-_133772794_133772840	0.0625664	FOXA3_FOXC2	ENST00000519187.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000523829.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000356838.3|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000377901.4|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000519304.1|TMEM71|ENSG00000165071.10|transmembrane protein 71
hg19_v2_chr14_-_74551172_74551196	0.0616644	FOXA3_FOXC2	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr1_-_246357029_246357043	0.0594425	FOXA3_FOXC2	ENST00000391836.2|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3
hg19_v2_chr2_+_20650796_20650830	0.0587408	FOXA3_FOXC2	ENST00000448241.1|AC023137.2|ENSG00000228950.1|AC023137.2
hg19_v2_chr15_+_60296421_60296464	0.0564399	FOXA3_FOXC2	ENST00000396057.4|FOXB1|ENSG00000171956.5|forkhead box B1
hg19_v2_chr11_+_7110165_7110277	0.049905	FOXA3_FOXC2	ENST00000306904.5|RBMXL2|ENSG00000170748.5|RNA binding motif protein, X-linked-like 2
hg19_v2_chr15_+_80364901_80364932	0.0488286	FOXA3_FOXC2	ENST00000560228.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559835.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559775.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558688.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560392.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560976.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558272.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558390.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr14_-_23299009_23299029	0.0479945	FOXA3_FOXC2	ENST00000488800.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr1_-_179851611_179851730	0.0444596	FOXA3_FOXC2	ENST00000610272.1|RP11-533E19.7|ENSG00000272906.1|RP11-533E19.7
hg19_v2_chr1_+_172389821_172389833	0.0436523	FOXA3_FOXC2	ENST00000367727.4|C1orf105|ENSG00000180999.6|chromosome 1 open reading frame 105
hg19_v2_chr12_-_71551652_71551679	0.0408954	FOXA3_FOXC2	ENST00000546561.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr12_-_39734783_39734860	0.0374171	FOXA3_FOXC2	ENST00000552961.1|KIF21A|ENSG00000139116.13|kinesin family member 21A
hg19_v2_chr14_+_51706886_51707006	0.035609	FOXA3_FOXC2	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr4_+_110769258_110769358	0.0346436	FOXA3_FOXC2	ENST00000594814.1|LRIT3|ENSG00000183423.7|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
hg19_v2_chr3_+_136649311_136649360	0.0338895	FOXA3_FOXC2	ENST00000469404.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1 	ENST00000467911.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1
hg19_v2_chr10_+_70847852_70847874	0.0334666	FOXA3_FOXC2	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr1_-_150669500_150669602	0.0312748	FOXA3_FOXC2	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr15_-_65321943_65321984	0.0294943	FOXA3_FOXC2	ENST00000220058.4|MTFMT|ENSG00000103707.5|mitochondrial methionyl-tRNA formyltransferase
hg19_v2_chr5_+_74807886_74807926	0.0294782	FOXA3_FOXC2	ENST00000514296.1|POLK|ENSG00000122008.11|polymerase (DNA directed) kappa
hg19_v2_chr15_-_59665062_59665099	0.0283626	FOXA3_FOXC2	ENST00000288235.4|MYO1E|ENSG00000157483.4|myosin IE
hg19_v2_chr4_+_166794383_166794500	0.0256515	FOXA3_FOXC2	ENST00000061240.2|TLL1|ENSG00000038295.3|tolloid-like 1 	ENST00000507499.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr8_-_145754428_145754516	0.0235141	FOXA3_FOXC2	ENST00000527462.1|C8orf82|ENSG00000213563.2|chromosome 8 open reading frame 82 	ENST00000313465.5|C8orf82|ENSG00000213563.2|chromosome 8 open reading frame 82 	ENST00000524821.1|C8orf82|ENSG00000213563.2|chromosome 8 open reading frame 82
hg19_v2_chr17_+_4613918_4614000	0.0216525	FOXA3_FOXC2	ENST00000574954.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000346341.2|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000572457.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000381488.6|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000412477.3|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000571428.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000575877.1|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr3_-_45957534_45957655	0.0206605	FOXA3_FOXC2	ENST00000536047.1|LZTFL1|ENSG00000163818.12|leucine zipper transcription factor-like 1
hg19_v2_chr16_+_67381289_67381306	0.0189385	FOXA3_FOXC2	ENST00000435835.3|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36
hg19_v2_chr10_-_46030841_46030846	0.0182561	FOXA3_FOXC2	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr8_-_28243934_28243993	0.0174413	FOXA3_FOXC2	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr6_+_1080164_1080164	0.0173373	FOXA3_FOXC2	ENST00000314040.1|AL033381.1|ENSG00000176515.1|Uncharacterized protein; cDNA FLJ34594 fis, clone KIDNE2009109
hg19_v2_chr17_-_39041479_39041501	0.0168432	FOXA3_FOXC2	ENST00000167588.3|KRT20|ENSG00000171431.3|keratin 20
hg19_v2_chr8_+_101349823_101349862	0.0158638	FOXA3_FOXC2	ENST00000519566.1|KB-1991G8.1|ENSG00000253217.1|KB-1991G8.1
hg19_v2_chr7_+_116654958_116655009	0.0130588	FOXA3_FOXC2	ENST00000449366.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr5_-_98262240_98262240	0.00774124	FOXA3_FOXC2	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr10_-_50603497_50603497	0.00599412	FOXA3_FOXC2	ENST00000374139.2|DRGX|ENSG00000165606.4|dorsal root ganglia homeobox
hg19_v2_chr11_+_65657875_65657875	0.00579257	FOXA3_FOXC2	ENST00000312579.2|CCDC85B|ENSG00000175602.2|coiled-coil domain containing 85B
hg19_v2_chr1_+_40713573_40713620	0.00510584	FOXA3_FOXC2	ENST00000372766.3|TMCO2|ENSG00000188800.5|transmembrane and coiled-coil domains 2
hg19_v2_chr5_+_135468516_135468621	0.00446335	FOXA3_FOXC2	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr6_-_24666819_24666974	0.00226045	FOXA3_FOXC2	ENST00000341060.3|TDP2|ENSG00000111802.9|tyrosyl-DNA phosphodiesterase 2
hg19_v2_chr3_-_114343039_114343085	0.00104392	FOXA3_FOXC2	ENST00000481632.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
