hg19_v2_chr8_-_11324273_11324289	0.812233	GCUACAU	ENST00000284486.4|FAM167A|ENSG00000154319.10|family with sequence similarity 167, member A
hg19_v2_chr8_-_60031762_60031803	0.761767	GCUACAU	ENST00000361421.1|TOX|ENSG00000198846.5|thymocyte selection-associated high mobility group box
hg19_v2_chr7_+_20370746_20370778	0.552862	GCUACAU	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr2_-_152955537_152955593	0.544802	GCUACAU	ENST00000201943.5|CACNB4|ENSG00000182389.14|calcium channel, voltage-dependent, beta 4 subunit 	ENST00000539935.1|CACNB4|ENSG00000182389.14|calcium channel, voltage-dependent, beta 4 subunit
hg19_v2_chr4_-_176923483_176923514	0.511462	GCUACAU	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr5_+_161274685_161274747	0.507624	GCUACAU	ENST00000428797.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr5_+_140207536_140207650	0.456772	GCUACAU	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr11_-_94964354_94964374	0.453748	GCUACAU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr4_+_55524085_55524110	0.451637	GCUACAU	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr12_+_67663056_67663067	0.445164	GCUACAU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr5_+_140306478_140306478	0.443867	GCUACAU	ENST00000253807.2|PCDHAC1|ENSG00000248383.3|protocadherin alpha subfamily C, 1
hg19_v2_chr5_+_140254884_140255058	0.439591	GCUACAU	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr5_+_140235469_140235634	0.438148	GCUACAU	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr5_+_140248518_140248689	0.413999	GCUACAU	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr19_-_1652575_1652621	0.397049	GCUACAU	ENST00000587235.1|TCF3|ENSG00000071564.10|transcription factor 3 	ENST00000262965.5|TCF3|ENSG00000071564.10|transcription factor 3
hg19_v2_chr5_+_140213815_140213969	0.391666	GCUACAU	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr9_-_3525968_3526016	0.39156	GCUACAU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr1_-_23857698_23857733	0.39051	GCUACAU	ENST00000361729.2|E2F2|ENSG00000007968.6|E2F transcription factor 2
hg19_v2_chr6_+_114178512_114178586	0.383351	GCUACAU	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr14_-_99737565_99737617	0.374133	GCUACAU	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr13_+_112721913_112721913	0.369494	GCUACAU	ENST00000330949.1|SOX1|ENSG00000182968.3|SRY (sex determining region Y)-box 1
hg19_v2_chr9_+_976964_976964	0.369469	GCUACAU	ENST00000190165.2|DMRT3|ENSG00000064218.4|doublesex and mab-3 related transcription factor 3
hg19_v2_chr1_-_41131326_41131400	0.368584	GCUACAU	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr4_-_42154895_42154895	0.365237	GCUACAU	ENST00000502486.1|BEND4|ENSG00000188848.11|BEN domain containing 4 	ENST00000504360.1|BEND4|ENSG00000188848.11|BEN domain containing 4
hg19_v2_chr11_+_119076745_119076792	0.364249	GCUACAU	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr9_+_15553055_15553101	0.355997	GCUACAU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr5_+_140345820_140345820	0.353537	GCUACAU	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr6_-_10415470_10415508	0.353128	GCUACAU	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr5_+_140227048_140227048	0.348231	GCUACAU	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr12_-_54779511_54779577	0.344663	GCUACAU	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr1_-_156051789_156051838	0.338426	GCUACAU	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr5_-_137090028_137090075	0.322796	GCUACAU	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr13_+_88324870_88324870	0.322657	GCUACAU	ENST00000325089.6|SLITRK5|ENSG00000165300.6|SLIT and NTRK-like family, member 5
hg19_v2_chr5_+_140180635_140180783	0.322236	GCUACAU	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chrX_+_146993449_146993498	0.310254	GCUACAU	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr5_+_140220769_140220907	0.298624	GCUACAU	ENST00000531613.1|PCDHA8|ENSG00000204962.4|protocadherin alpha 8 	ENST00000378123.3|PCDHA8|ENSG00000204962.4|protocadherin alpha 8
hg19_v2_chr9_+_116638562_116638606	0.288324	GCUACAU	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr14_+_74111578_74111730	0.279718	GCUACAU	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr9_-_115095883_115095947	0.277662	GCUACAU	ENST00000450374.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374255.2|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000334318.6|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374257.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr15_-_101792137_101792159	0.276115	GCUACAU	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
hg19_v2_chrX_-_80065146_80065250	0.249391	GCUACAU	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr8_-_116681221_116681236	0.248646	GCUACAU	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr6_+_37225540_37225558	0.245698	GCUACAU	ENST00000373491.3|TBC1D22B|ENSG00000065491.8|TBC1 domain family, member 22B
hg19_v2_chr17_-_58603568_58603610	0.24343	GCUACAU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr16_+_28303804_28303864	0.240451	GCUACAU	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr5_-_175964366_175964429	0.238243	GCUACAU	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr9_-_23821273_23821313	0.22942	GCUACAU	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr5_+_140165876_140165876	0.226462	GCUACAU	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr6_+_16129308_16129402	0.223678	GCUACAU	ENST00000356840.3|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein 	ENST00000349606.4|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein
hg19_v2_chr1_-_224033596_224033697	0.223385	GCUACAU	ENST00000391878.2|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2 	ENST00000343537.7|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2
hg19_v2_chr6_+_45389893_45389914	0.219336	GCUACAU	ENST00000371432.3|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr12_+_12870055_12870119	0.211262	GCUACAU	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr2_-_24149977_24150007	0.210784	GCUACAU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr12_+_94542459_94542513	0.208374	GCUACAU	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr15_+_39873268_39873294	0.206247	GCUACAU	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr6_-_90062543_90062567	0.202902	GCUACAU	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr5_+_156887027_156887059	0.202011	GCUACAU	ENST00000435489.2|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4 	ENST00000311946.7|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4
hg19_v2_chr5_+_140261703_140261854	0.199824	GCUACAU	ENST00000409494.1|PCDHA13|ENSG00000239389.3|protocadherin alpha 13 	ENST00000289272.2|PCDHA13|ENSG00000239389.3|protocadherin alpha 13
hg19_v2_chr2_+_54951679_54951679	0.197647	GCUACAU	ENST00000356458.6|EML6|ENSG00000214595.7|echinoderm microtubule associated protein like 6
hg19_v2_chr8_-_67525473_67525518	0.193636	GCUACAU	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr5_+_140201183_140201361	0.185516	GCUACAU	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr2_-_160472952_160473080	0.179393	GCUACAU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr2_-_208030647_208030689	0.177407	GCUACAU	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr17_-_27278304_27278408	0.176157	GCUACAU	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr9_-_123476719_123476810	0.174662	GCUACAU	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr5_+_140186647_140186773	0.164649	GCUACAU	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr4_-_69215699_69215815	0.160966	GCUACAU	ENST00000510746.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000344157.4|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000355665.3|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr18_-_53255766_53255860	0.159727	GCUACAU	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr2_-_2334888_2335053	0.157475	GCUACAU	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr8_+_32405728_32405749	0.1536	GCUACAU	ENST00000523079.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000338921.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000356819.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000287845.5|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000341377.5|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr1_-_157108130_157108173	0.152336	GCUACAU	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr6_+_123317116_123317260	0.148187	GCUACAU	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr12_-_121342170_121342183	0.145366	GCUACAU	ENST00000353487.2|SPPL3|ENSG00000157837.11|signal peptide peptidase like 3
hg19_v2_chr12_-_33592743_33592764	0.144528	GCUACAU	ENST00000228567.3|SYT10|ENSG00000110975.4|synaptotagmin X
hg19_v2_chr5_-_77844974_77844994	0.143283	GCUACAU	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr7_-_25019760_25019855	0.136789	GCUACAU	ENST00000352860.1|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3 	ENST00000353930.1|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3 	ENST00000431825.2|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3 	ENST00000313367.2|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3
hg19_v2_chr14_-_91720224_91720378	0.134497	GCUACAU	ENST00000238699.3|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000531499.2|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr1_+_97187318_97187380	0.131633	GCUACAU	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr14_+_75745477_75745680	0.129262	GCUACAU	ENST00000303562.4|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554617.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554212.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000535987.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000555242.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr1_-_222885770_222885866	0.120191	GCUACAU	ENST00000355727.2|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated 	ENST00000340020.6|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated
hg19_v2_chr2_+_148778570_148778589	0.118117	GCUACAU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr1_+_75594119_75594119	0.117733	GCUACAU	ENST00000294638.5|LHX8|ENSG00000162624.10|LIM homeobox 8
hg19_v2_chr9_-_73736511_73736546	0.117674	GCUACAU	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr1_+_24286287_24286326	0.117397	GCUACAU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr1_+_33283043_33283198	0.111695	GCUACAU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr2_+_70142189_70142223	0.110487	GCUACAU	ENST00000264444.2|MXD1|ENSG00000059728.6|MAX dimerization protein 1
hg19_v2_chr5_+_179921430_179921461	0.1099	GCUACAU	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr2_-_43453734_43453751	0.109813	GCUACAU	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr4_-_83719983_83720085	0.109331	GCUACAU	ENST00000319540.4|SCD5|ENSG00000145284.7|stearoyl-CoA desaturase 5
hg19_v2_chr3_+_11314099_11314122	0.109049	GCUACAU	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr20_-_43438912_43439165	0.103648	GCUACAU	ENST00000541604.2|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4 	ENST00000372851.3|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4
hg19_v2_chr8_-_133493200_133493352	0.101763	GCUACAU	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr11_+_109292846_109292875	0.100736	GCUACAU	ENST00000327419.6|C11orf87|ENSG00000185742.6|chromosome 11 open reading frame 87
hg19_v2_chr5_+_140174429_140174550	0.0972896	GCUACAU	ENST00000520672.2|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000378132.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000526136.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2
hg19_v2_chr6_-_16761678_16761721	0.0971502	GCUACAU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr7_-_27196267_27196311	0.0952441	GCUACAU	ENST00000242159.3|HOXA7|ENSG00000122592.6|homeobox A7
hg19_v2_chr4_+_144434584_144434709	0.0933831	GCUACAU	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr2_-_213403565_213403584	0.0918796	GCUACAU	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr6_-_62996066_62996137	0.0912034	GCUACAU	ENST00000281156.4|KHDRBS2|ENSG00000112232.8|KH domain containing, RNA binding, signal transduction associated 2
hg19_v2_chr5_+_56469775_56469837	0.090256	GCUACAU	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr2_+_46926048_46926095	0.0841451	GCUACAU	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr5_-_176057365_176057517	0.082178	GCUACAU	ENST00000310112.3|SNCB|ENSG00000074317.6|synuclein, beta
hg19_v2_chr4_-_87281224_87281375	0.082017	GCUACAU	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chrX_-_109561294_109561467	0.0816484	GCUACAU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr17_-_76870222_76870242	0.0799422	GCUACAU	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr7_-_558876_559046	0.0791383	GCUACAU	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr12_+_70636765_70636817	0.0771546	GCUACAU	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr12_+_69864129_69864222	0.0763246	GCUACAU	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr10_+_119302508_119302559	0.0738562	GCUACAU	ENST00000442245.4|EMX2|ENSG00000170370.10|empty spiracles homeobox 2
hg19_v2_chr17_-_27621125_27621143	0.0725143	GCUACAU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr9_+_103790991_103791001	0.0724	GCUACAU	ENST00000374874.3|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chr19_+_13906250_13906274	0.0720178	GCUACAU	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr16_+_12070567_12070623	0.0708025	GCUACAU	ENST00000566228.1|SNX29|ENSG00000048471.9|sorting nexin 29
hg19_v2_chr1_-_117210290_117210376	0.0690572	GCUACAU	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr3_-_184870751_184870872	0.0683201	GCUACAU	ENST00000335012.2|C3orf70|ENSG00000187068.2|chromosome 3 open reading frame 70
hg19_v2_chr3_-_11762202_11762226	0.0677951	GCUACAU	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chrX_-_110655391_110655449	0.0674341	GCUACAU	ENST00000356915.2|DCX|ENSG00000077279.12|doublecortin 	ENST00000356220.3|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr14_+_77228532_77228672	0.0673871	GCUACAU	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chrX_+_103411189_103411301	0.0667778	GCUACAU	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr10_-_118764862_118764887	0.0656355	GCUACAU	ENST00000260777.10|KIAA1598|ENSG00000187164.13|KIAA1598
hg19_v2_chr3_-_57583130_57583152	0.0625324	GCUACAU	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr16_-_66730583_66730689	0.0624526	GCUACAU	ENST00000330687.4|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000394106.2|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000563952.1|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4
hg19_v2_chr5_-_171881491_171881554	0.0583562	GCUACAU	ENST00000311601.5|SH3PXD2B|ENSG00000174705.7|SH3 and PX domains 2B
hg19_v2_chr9_+_36036430_36036430	0.0564374	GCUACAU	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr1_+_26438289_26438352	0.05523	GCUACAU	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr3_+_169684553_169684616	0.0550094	GCUACAU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr3_-_170626418_170626482	0.054469	GCUACAU	ENST00000474096.1|EIF5A2|ENSG00000163577.3|eukaryotic translation initiation factor 5A2 	ENST00000295822.2|EIF5A2|ENSG00000163577.3|eukaryotic translation initiation factor 5A2
hg19_v2_chr6_-_40555176_40555204	0.0533536	GCUACAU	ENST00000338305.6|LRFN2|ENSG00000156564.8|leucine rich repeat and fibronectin type III domain containing 2
hg19_v2_chr5_-_16936340_16936418	0.0526423	GCUACAU	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr3_-_135914615_135914701	0.0497564	GCUACAU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr3_-_169530452_169530485	0.0492615	GCUACAU	ENST00000446859.1|LRRC34|ENSG00000171757.11|leucine rich repeat containing 34
hg19_v2_chr8_+_38758737_38758763	0.0491721	GCUACAU	ENST00000521746.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 	ENST00000420274.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg19_v2_chr2_+_178077477_178077525	0.0490284	GCUACAU	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr20_-_50159198_50159299	0.0477962	GCUACAU	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr1_-_207224307_207224422	0.0441232	GCUACAU	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr5_+_79703823_79703845	0.0439831	GCUACAU	ENST00000338008.5|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000510158.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000505560.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16
hg19_v2_chr18_-_51751132_51751158	0.0438896	GCUACAU	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr10_-_99094458_99094500	0.0417478	GCUACAU	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr1_+_215256467_215256622	0.0414239	GCUACAU	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr11_-_70507901_70507958	0.040779	GCUACAU	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chrX_-_72434628_72434722	0.0400215	GCUACAU	ENST00000536638.1|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2 	ENST00000373517.3|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2
hg19_v2_chr5_-_169407744_169407744	0.0398669	GCUACAU	ENST00000377365.3|FAM196B|ENSG00000204767.3|family with sequence similarity 196, member B
hg19_v2_chr1_-_89357179_89357301	0.0393061	GCUACAU	ENST00000448623.1|GTF2B|ENSG00000137947.7|general transcription factor IIB 	ENST00000418217.1|GTF2B|ENSG00000137947.7|general transcription factor IIB 	ENST00000370500.5|GTF2B|ENSG00000137947.7|general transcription factor IIB
hg19_v2_chr12_+_113229737_113229821	0.0383403	GCUACAU	ENST00000551052.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse) 	ENST00000415485.3|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr5_-_150948414_150948505	0.0373496	GCUACAU	ENST00000261800.5|FAT2|ENSG00000086570.8|FAT atypical cadherin 2
hg19_v2_chr7_-_105029329_105029376	0.0370485	GCUACAU	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr7_+_91875508_91875559	0.0368951	GCUACAU	ENST00000265742.3|ANKIB1|ENSG00000001629.5|ankyrin repeat and IBR domain containing 1
hg19_v2_chr17_+_36508111_36508128	0.0335963	GCUACAU	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr1_+_110091189_110091268	0.0327771	GCUACAU	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr14_-_27066636_27066701	0.0321855	GCUACAU	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr18_+_6834472_6834495	0.0312727	GCUACAU	ENST00000581099.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000419673.2|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000531294.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr17_+_38278530_38278605	0.0311254	GCUACAU	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr17_+_61627814_61627871	0.0306826	GCUACAU	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr11_-_95657231_95657459	0.0303512	GCUACAU	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chr16_-_31021921_31022044	0.029109	GCUACAU	ENST00000215095.5|STX1B|ENSG00000099365.5|syntaxin 1B
hg19_v2_chr1_-_150849208_150849244	0.0282313	GCUACAU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr7_+_77325738_77325789	0.0276307	GCUACAU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr10_-_11653753_11653806	0.0273357	GCUACAU	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr3_+_182511266_182511308	0.0250094	GCUACAU	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chr17_+_41177220_41177282	0.024827	GCUACAU	ENST00000587250.2|RND2|ENSG00000108830.7|Rho family GTPase 2 	ENST00000544533.1|RND2|ENSG00000108830.7|Rho family GTPase 2
hg19_v2_chr2_+_111878483_111878506	0.0245643	GCUACAU	ENST00000308659.8|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000357757.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393253.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000337565.5|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393256.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr3_-_185542817_185542844	0.0244035	GCUACAU	ENST00000382199.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr8_+_23386305_23386318	0.0219289	GCUACAU	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr1_-_242687676_242687820	0.0216481	GCUACAU	ENST00000536534.2|PLD5|ENSG00000180287.12|phospholipase D family, member 5
hg19_v2_chr15_+_81293254_81293304	0.0216025	GCUACAU	ENST00000267984.2|MESDC1|ENSG00000140406.2|mesoderm development candidate 1
hg19_v2_chr10_+_121652204_121652286	0.0206671	GCUACAU	ENST00000369075.3|SEC23IP|ENSG00000107651.8|SEC23 interacting protein 	ENST00000543134.1|SEC23IP|ENSG00000107651.8|SEC23 interacting protein
hg19_v2_chrX_+_105066524_105066552	0.0198939	GCUACAU	ENST00000243300.9|NRK|ENSG00000123572.12|Nik related kinase 	ENST00000428173.2|NRK|ENSG00000123572.12|Nik related kinase
hg19_v2_chr4_-_89619386_89619386	0.0191775	GCUACAU	ENST00000323061.5|NAP1L5|ENSG00000177432.6|nucleosome assembly protein 1-like 5
hg19_v2_chr9_-_74980113_74980163	0.018852	GCUACAU	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr1_+_63833261_63833282	0.0186691	GCUACAU	ENST00000371108.4|ALG6|ENSG00000088035.11|ALG6, alpha-1,3-glucosyltransferase
hg19_v2_chr3_-_107809816_107809885	0.0181108	GCUACAU	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr10_+_114709999_114710031	0.0175459	GCUACAU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr4_-_122854612_122854612	0.0165826	GCUACAU	ENST00000264811.5|TRPC3|ENSG00000138741.6|transient receptor potential cation channel, subfamily C, member 3
hg19_v2_chr3_-_124774802_124774852	0.0165678	GCUACAU	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr17_-_3794021_3794042	0.0162824	GCUACAU	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr17_-_74733404_74733456	0.0158838	GCUACAU	ENST00000508921.3|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000583836.1|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000358156.6|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000392485.2|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000359995.5|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2
hg19_v2_chr3_-_28390581_28390618	0.0150313	GCUACAU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr12_-_104532062_104532071	0.0141413	GCUACAU	ENST00000240055.3|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chrX_-_54384425_54384495	0.01253	GCUACAU	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr12_+_6898638_6898669	0.0123635	GCUACAU	ENST00000011653.4|CD4|ENSG00000010610.5|CD4 molecule
hg19_v2_chr20_-_48532019_48532045	0.01232	GCUACAU	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr15_+_44719394_44719579	0.0114472	GCUACAU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr17_-_76356148_76356165	0.0113912	GCUACAU	ENST00000587578.1|SOCS3|ENSG00000184557.3|suppressor of cytokine signaling 3 	ENST00000330871.2|SOCS3|ENSG00000184557.3|suppressor of cytokine signaling 3
hg19_v2_chr5_-_127873659_127873735	0.0107806	GCUACAU	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr6_+_152011628_152011642	0.00913385	GCUACAU	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr13_+_20532807_20532841	0.00912576	GCUACAU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr13_+_53226963_53227023	0.00781328	GCUACAU	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr11_+_70244510_70244696	0.00724348	GCUACAU	ENST00000346329.3|CTTN|ENSG00000085733.11|cortactin 	ENST00000301843.8|CTTN|ENSG00000085733.11|cortactin 	ENST00000376561.3|CTTN|ENSG00000085733.11|cortactin
hg19_v2_chr2_+_208394616_208394655	0.00719392	GCUACAU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr15_-_41624685_41624819	0.00707166	GCUACAU	ENST00000560640.1|OIP5|ENSG00000104147.4|Opa interacting protein 5 	ENST00000220514.3|OIP5|ENSG00000104147.4|Opa interacting protein 5
hg19_v2_chr1_-_27816556_27816572	0.00696939	GCUACAU	ENST00000536657.1|WASF2|ENSG00000158195.6|WAS protein family, member 2
hg19_v2_chr12_+_62860581_62860629	0.00558225	GCUACAU	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr4_+_699537_699600	0.00549529	GCUACAU	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr17_-_63557759_63557774	0.00472638	GCUACAU	ENST00000307078.5|AXIN2|ENSG00000168646.8|axin 2
hg19_v2_chr8_+_28747884_28747938	0.00425666	GCUACAU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr12_+_41831485_41831555	0.00424203	GCUACAU	ENST00000539469.2|PDZRN4|ENSG00000165966.10|PDZ domain containing ring finger 4 	ENST00000298919.7|PDZRN4|ENSG00000165966.10|PDZ domain containing ring finger 4
hg19_v2_chr15_+_90808919_90808937	0.00375362	GCUACAU	ENST00000379095.3|NGRN|ENSG00000182768.7|neugrin, neurite outgrowth associated
hg19_v2_chr2_-_65357225_65357267	0.00350084	GCUACAU	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr5_-_168006591_168006638	0.00225321	GCUACAU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr17_+_36861735_36861795	0.00178824	GCUACAU	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr9_+_96338860_96338939	0.00137643	GCUACAU	ENST00000375376.4|PHF2|ENSG00000197724.6|PHD finger protein 2
hg19_v2_chr2_+_109335929_109336002	0.00126753	GCUACAU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr1_+_28696111_28696130	0.00123056	GCUACAU	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr12_+_56473628_56473680	0.00106657	GCUACAU	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr5_-_56247935_56247959	0.000294428	GCUACAU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
