hg19_v2_chr10_-_92681033_92681033	12.2806	HOXA4	ENST00000371697.3|ANKRD1|ENSG00000148677.6|ankyrin repeat domain 1 (cardiac muscle)
hg19_v2_chr1_+_160160346_160160401	6.78082	HOXA4	ENST00000368078.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr1_+_160160283_160160292	6.67291	HOXA4	ENST00000368079.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr3_+_121311966_121311966	6.23794	HOXA4	ENST00000338040.4|FBXO40|ENSG00000163833.6|F-box protein 40
hg19_v2_chr17_-_10452929_10452946	6.2249	HOXA4	ENST00000532183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000397183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000420805.1|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult
hg19_v2_chr17_-_10421853_10421866	5.74516	HOXA4	ENST00000226207.5|MYH1|ENSG00000109061.9|myosin, heavy chain 1, skeletal muscle, adult
hg19_v2_chr22_+_26138108_26138201	5.6922	HOXA4	ENST00000536101.1|MYO18B|ENSG00000133454.11|myosin XVIIIB 	ENST00000335473.7|MYO18B|ENSG00000133454.11|myosin XVIIIB 	ENST00000407587.2|MYO18B|ENSG00000133454.11|myosin XVIIIB
hg19_v2_chr1_-_100643765_100643829	5.49662	HOXA4	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr21_+_17442799_17442853	4.96552	HOXA4	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr16_+_7382745_7382769	4.41042	HOXA4	ENST00000436368.2|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000311745.5|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000355637.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000340209.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr3_-_42744270_42744298	4.24333	HOXA4	ENST00000457462.1|HHATL|ENSG00000010282.10|hedgehog acyltransferase-like
hg19_v2_chr5_-_38557561_38557574	4.14226	HOXA4	ENST00000511561.1|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr11_+_112046190_112046245	4.05057	HOXA4	ENST00000357685.5|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000393032.2|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000361053.4|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2
hg19_v2_chr10_-_75415825_75415873	4.01649	HOXA4	ENST00000394810.2|SYNPO2L|ENSG00000166317.7|synaptopodin 2-like
hg19_v2_chr4_-_152147579_152147750	4.00078	HOXA4	ENST00000304527.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000455740.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000424281.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000409598.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19
hg19_v2_chr10_-_69455873_69455960	3.94191	HOXA4	ENST00000433211.2|CTNNA3|ENSG00000183230.12|catenin (cadherin-associated protein), alpha 3
hg19_v2_chr3_-_42744130_42744141	3.8668	HOXA4	ENST00000417472.1|HHATL|ENSG00000010282.10|hedgehog acyltransferase-like 	ENST00000442469.1|HHATL|ENSG00000010282.10|hedgehog acyltransferase-like
hg19_v2_chr3_-_52486841_52486882	3.75124	HOXA4	ENST00000496590.1|TNNC1|ENSG00000114854.3|troponin C type 1 (slow)
hg19_v2_chr11_+_12766583_12766592	3.66298	HOXA4	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr11_+_27062860_27062929	3.6409	HOXA4	ENST00000528583.1|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
hg19_v2_chr11_-_13517565_13517728	3.52944	HOXA4	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr3_+_159557637_159557650	3.42257	HOXA4	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr12_+_12938541_12938600	3.34234	HOXA4	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr8_-_42358742_42358787	3.34	HOXA4	ENST00000517366.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr1_+_81771806_81771876	3.32915	HOXA4	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr1_+_170632250_170632277	3.18281	HOXA4	ENST00000367760.3|PRRX1|ENSG00000116132.7|paired related homeobox 1
hg19_v2_chr14_-_80697396_80697402	2.96459	HOXA4	ENST00000557010.1|DIO2|ENSG00000211448.7|deiodinase, iodothyronine, type II
hg19_v2_chr17_-_67138015_67138062	2.83633	HOXA4	ENST00000284425.2|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6 	ENST00000590645.1|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v2_chr8_+_79503458_79503473	2.72473	HOXA4	ENST00000518467.1|PKIA|ENSG00000171033.8|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v2_chr16_+_6533380_6533416	2.72405	HOXA4	ENST00000552089.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr1_+_214161272_214161322	2.71968	HOXA4	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr20_+_53092232_53092279	2.65643	HOXA4	ENST00000395939.1|DOK5|ENSG00000101134.7|docking protein 5
hg19_v2_chr5_+_150406527_150406537	2.65233	HOXA4	ENST00000520059.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr11_-_27494309_27494328	2.64102	HOXA4	ENST00000389858.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chr5_-_1882858_1883003	2.61089	HOXA4	ENST00000511126.1|IRX4|ENSG00000113430.5|iroquois homeobox 4 	ENST00000231357.2|IRX4|ENSG00000113430.5|iroquois homeobox 4
hg19_v2_chr11_-_27494279_27494308	2.57856	HOXA4	ENST00000379214.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chr6_-_55740352_55740362	2.56775	HOXA4	ENST00000370830.3|BMP5|ENSG00000112175.6|bone morphogenetic protein 5
hg19_v2_chr2_-_180427304_180427323	2.44922	HOXA4	ENST00000336917.5|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr15_+_51669444_51669479	2.34879	HOXA4	ENST00000396399.2|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr9_+_87284622_87284653	2.34623	HOXA4	ENST00000395882.1|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr1_-_216978709_216978728	2.26696	HOXA4	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr20_+_53092123_53092149	2.26111	HOXA4	ENST00000262593.5|DOK5|ENSG00000101134.7|docking protein 5
hg19_v2_chr21_+_17443521_17443553	2.2395	HOXA4	ENST00000456342.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr12_-_86650045_86650076	2.22848	HOXA4	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr2_-_69098566_69098649	2.19399	HOXA4	ENST00000295379.1|BMP10|ENSG00000163217.1|bone morphogenetic protein 10
hg19_v2_chr7_-_14029283_14029311	2.13142	HOXA4	ENST00000433547.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405192.2|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr10_-_33623310_33623478	2.1312	HOXA4	ENST00000395995.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374823.5|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374821.5|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374816.3|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr17_-_10372875_10372876	2.12216	HOXA4	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin, heavy chain 4, skeletal muscle
hg19_v2_chr12_-_86650077_86650095	2.10853	HOXA4	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr21_+_17961006_17961038	1.96795	HOXA4	ENST00000602323.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chrX_-_55024967_55024985	1.964	HOXA4	ENST00000545676.1|PFKFB1|ENSG00000158571.6|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
hg19_v2_chr9_+_87284675_87284698	1.91712	HOXA4	ENST00000376208.1|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2 	ENST00000304053.6|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2 	ENST00000277120.3|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr12_-_86650154_86650178	1.91257	HOXA4	ENST00000552435.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr2_-_190927447_190927466	1.84908	HOXA4	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr2_+_101437487_101437619	1.84462	HOXA4	ENST00000427413.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2 	ENST00000542504.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr14_-_36988882_36988898	1.83273	HOXA4	ENST00000498187.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr8_-_28347737_28347835	1.78796	HOXA4	ENST00000517673.1|FBXO16|ENSG00000214050.3|F-box protein 16 	ENST00000518734.1|FBXO16|ENSG00000214050.3|F-box protein 16 	ENST00000346498.2|FBXO16|ENSG00000214050.3|F-box protein 16 	ENST00000380254.2|FBXO16|ENSG00000214050.3|F-box protein 16
hg19_v2_chr7_-_14028488_14028516	1.77505	HOXA4	ENST00000405358.4|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr7_+_95115210_95115217	1.72205	HOXA4	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chrM_+_5824_5904	1.72025	HOXA4	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr7_-_14026123_14026139	1.64974	HOXA4	ENST00000420159.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000399357.3|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000403527.1|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr7_+_107110488_107110515	1.6204	HOXA4	ENST00000304402.4|GPR22|ENSG00000172209.4|G protein-coupled receptor 22
hg19_v2_chr11_+_22688150_22688192	1.61524	HOXA4	ENST00000454584.2|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr19_+_45409011_45409069	1.60612	HOXA4	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr14_-_36989336_36989354	1.58913	HOXA4	ENST00000522719.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr2_+_128403720_128403747	1.54457	HOXA4	ENST00000272644.3|GPR17|ENSG00000144230.12|G protein-coupled receptor 17
hg19_v2_chr7_-_143892748_143892748	1.47855	HOXA4	ENST00000378115.2|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chr7_-_143991230_143991230	1.47249	HOXA4	ENST00000543357.1|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chr21_+_17443434_17443515	1.46923	HOXA4	ENST00000400178.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr14_-_54423529_54423552	1.46891	HOXA4	ENST00000245451.4|BMP4|ENSG00000125378.11|bone morphogenetic protein 4 	ENST00000559087.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr5_-_56778635_56778640	1.45852	HOXA4	ENST00000423391.1|ACTBL2|ENSG00000169067.2|actin, beta-like 2
hg19_v2_chr20_+_57464200_57464215	1.4482	HOXA4	ENST00000604005.1|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr5_+_140810132_140810214	1.3591	HOXA4	ENST00000252085.3|PCDHGA12|ENSG00000253159.1|protocadherin gamma subfamily A, 12
hg19_v2_chr12_-_11091862_11091862	1.35714	HOXA4	ENST00000537503.1|TAS2R14|ENSG00000212127.5|taste receptor, type 2, member 14
hg19_v2_chr12_+_111537227_111537250	1.33163	HOXA4	ENST00000397643.3|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr7_+_32996997_32997094	1.30703	HOXA4	ENST00000242209.4|FKBP9|ENSG00000122642.6|FK506 binding protein 9, 63 kDa 	ENST00000538336.1|FKBP9|ENSG00000122642.6|FK506 binding protein 9, 63 kDa 	ENST00000538443.1|FKBP9|ENSG00000122642.6|FK506 binding protein 9, 63 kDa
hg19_v2_chr2_-_105030466_105030489	1.30024	HOXA4	ENST00000449772.1|AC068535.3|ENSG00000225765.1|AC068535.3
hg19_v2_chr16_-_85617170_85617191	1.28971	HOXA4	ENST00000602862.1|RP11-118F19.1|ENSG00000270124.1|RP11-118F19.1
hg19_v2_chr3_-_120400960_120401030	1.24371	HOXA4	ENST00000476082.2|HGD|ENSG00000113924.7|homogentisate 1,2-dioxygenase
hg19_v2_chr2_-_163099885_163099966	1.22907	HOXA4	ENST00000443424.1|FAP|ENSG00000078098.9|fibroblast activation protein, alpha
hg19_v2_chr10_-_62332357_62332428	1.16077	HOXA4	ENST00000503366.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr2_-_163100045_163100071	1.15461	HOXA4	ENST00000188790.4|FAP|ENSG00000078098.9|fibroblast activation protein, alpha
hg19_v2_chr7_-_14026063_14026091	1.12908	HOXA4	ENST00000443608.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000438956.1|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr12_+_27677085_27677189	1.11957	HOXA4	ENST00000545334.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000540114.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000537927.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000318304.8|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000535047.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000542629.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000228425.6|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
hg19_v2_chr14_-_23395623_23395665	1.10486	HOXA4	ENST00000556043.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5
hg19_v2_chr8_+_39792474_39792474	1.0861	HOXA4	ENST00000502986.2|IDO2|ENSG00000188676.9|indoleamine 2,3-dioxygenase 2
hg19_v2_chrX_-_84634737_84634754	1.04044	HOXA4	ENST00000262753.4|POF1B|ENSG00000124429.13|premature ovarian failure, 1B
hg19_v2_chr8_+_77593474_77593612	1.03834	HOXA4	ENST00000455469.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4 	ENST00000050961.6|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr12_-_16762971_16763035	1.02064	HOXA4	ENST00000540590.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr2_+_128403439_128403578	1.01898	HOXA4	ENST00000544369.1|GPR17|ENSG00000144230.12|G protein-coupled receptor 17
hg19_v2_chr5_+_159343688_159343790	0.964993	HOXA4	ENST00000306675.3|ADRA1B|ENSG00000170214.3|adrenoceptor alpha 1B
hg19_v2_chr17_-_77924627_77924661	0.960435	HOXA4	ENST00000572862.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000573782.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000574427.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000570373.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000340848.7|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16 	ENST00000576768.1|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr4_+_66536248_66536345	0.942815	HOXA4	ENST00000514260.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1	ENST00000507117.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1
hg19_v2_chr10_-_105845536_105845581	0.937481	HOXA4	ENST00000393211.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr12_-_57037284_57037374	0.901319	HOXA4	ENST00000551570.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr15_+_36994210_36994271	0.893527	HOXA4	ENST00000562489.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41
hg19_v2_chr4_+_84457250_84457268	0.889318	HOXA4	ENST00000395226.2|AGPAT9|ENSG00000138678.6|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v2_chr15_+_51669513_51669571	0.878083	HOXA4	ENST00000558426.1|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr11_-_40315640_40315684	0.837099	HOXA4	ENST00000278198.2|LRRC4C|ENSG00000148948.3|leucine rich repeat containing 4C
hg19_v2_chr8_-_10512569_10512612	0.828779	HOXA4	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr9_-_113341985_113342040	0.825412	HOXA4	ENST00000374469.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr4_+_84457529_84457564	0.814875	HOXA4	ENST00000264409.4|AGPAT9|ENSG00000138678.6|1-acylglycerol-3-phosphate O-acyltransferase 9
hg19_v2_chr17_-_10325261_10325267	0.803726	HOXA4	ENST00000403437.2|MYH8|ENSG00000133020.4|myosin, heavy chain 8, skeletal muscle, perinatal
hg19_v2_chr12_-_24103841_24103880	0.792754	HOXA4	ENST00000541847.1|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr2_-_171571077_171571077	0.788445	HOXA4	ENST00000409786.1|AC007405.2|ENSG00000222033.1|long intergenic non-protein coding RNA 1124
hg19_v2_chr10_-_101825151_101825200	0.775347	HOXA4	ENST00000441382.1|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr3_+_2553281_2553354	0.743382	HOXA4	ENST00000434053.1|CNTN4|ENSG00000144619.10|contactin 4
hg19_v2_chr5_+_152870106_152870188	0.743208	HOXA4	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr3_-_64253655_64253799	0.742553	HOXA4	ENST00000498162.1|PRICKLE2|ENSG00000163637.7|prickle homolog 2 (Drosophila)
hg19_v2_chr9_-_113342160_113342214	0.738647	HOXA4	ENST00000401783.2|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 	ENST00000374461.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr21_+_17909594_17909663	0.70289	HOXA4	ENST00000441820.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602280.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr6_+_31514622_31514647	0.690619	HOXA4	ENST00000376146.4|NFKBIL1|ENSG00000204498.6|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
hg19_v2_chr7_-_140714430_140714493	0.683855	HOXA4	ENST00000393008.3|MRPS33|ENSG00000090263.11|mitochondrial ribosomal protein S33
hg19_v2_chr8_-_141774467_141774622	0.674371	HOXA4	ENST00000520151.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519024.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519465.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr1_-_12677714_12677737	0.658928	HOXA4	ENST00000376223.2|DHRS3|ENSG00000162496.4|dehydrogenase/reductase (SDR family) member 3
hg19_v2_chr3_-_129513259_129513392	0.658859	HOXA4	ENST00000329333.5|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr5_+_40909354_40909354	0.656764	HOXA4	ENST00000313164.9|C7|ENSG00000112936.14|complement component 7
hg19_v2_chr8_+_22424551_22424585	0.642731	HOXA4	ENST00000523348.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr8_+_77593448_77593471	0.641244	HOXA4	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr3_+_122103014_122103088	0.627192	HOXA4	ENST00000232125.5|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A 	ENST00000477892.1|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A 	ENST00000469967.1|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A
hg19_v2_chr12_+_72058130_72058261	0.617431	HOXA4	ENST00000547843.1|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr9_-_16253112_16253112	0.616164	HOXA4	ENST00000380683.1|C9orf92|ENSG00000205549.4|chromosome 9 open reading frame 92
hg19_v2_chr5_+_133562095_133562118	0.612965	HOXA4	ENST00000602919.1|CTD-2410N18.3|ENSG00000270177.1|CTD-2410N18.3
hg19_v2_chr9_-_16276311_16276311	0.609432	HOXA4	ENST00000380685.1|C9orf92|ENSG00000205549.4|chromosome 9 open reading frame 92
hg19_v2_chr10_-_105845674_105845760	0.598276	HOXA4	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr2_-_163099546_163099567	0.593156	HOXA4	ENST00000447386.1|FAP|ENSG00000078098.9|fibroblast activation protein, alpha
hg19_v2_chr14_+_37131058_37131139	0.585665	HOXA4	ENST00000361487.6|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr15_+_89631647_89631725	0.535163	HOXA4	ENST00000569550.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565066.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565973.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr19_-_10047219_10047235	0.492146	HOXA4	ENST00000264833.4|OLFM2|ENSG00000105088.4|olfactomedin 2
hg19_v2_chr8_-_99955042_99955060	0.487704	HOXA4	ENST00000519420.1|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr12_+_53848549_53848644	0.465037	HOXA4	ENST00000439930.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000548933.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000562264.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr5_+_60933634_60933637	0.443066	HOXA4	ENST00000505642.1|C5orf64|ENSG00000178722.8|chromosome 5 open reading frame 64
hg19_v2_chr11_+_112832133_112832158	0.438126	HOXA4	ENST00000524665.1|NCAM1|ENSG00000149294.12|neural cell adhesion molecule 1
hg19_v2_chr6_-_31514516_31514625	0.425846	HOXA4	ENST00000303892.5|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 	ENST00000483251.1|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
hg19_v2_chr1_+_167298281_167298319	0.419142	HOXA4	ENST00000367862.5|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr6_+_152011628_152011642	0.41877	HOXA4	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr1_+_155658849_155658893	0.414014	HOXA4	ENST00000368336.5|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000343043.3|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000421487.2|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000535183.1|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000465375.1|DAP3|ENSG00000132676.11|death associated protein 3 	ENST00000470830.1|DAP3|ENSG00000132676.11|death associated protein 3
hg19_v2_chr15_-_61945400_61945464	0.399632	HOXA4	ENST00000560686.1|RP11-507B12.1|ENSG00000259675.1|RP11-507B12.1
hg19_v2_chr15_+_89631381_89631391	0.380938	HOXA4	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr1_+_245318279_245318297	0.372087	HOXA4	ENST00000407071.2|KIF26B|ENSG00000162849.11|kinesin family member 26B
hg19_v2_chr2_+_87135076_87135076	0.349736	HOXA4	ENST00000409776.2|RGPD1|ENSG00000187627.10|RANBP2-like and GRIP domain containing 1
hg19_v2_chr11_+_120971882_120971882	0.32916	HOXA4	ENST00000392793.1|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr5_+_66300446_66300463	0.318885	HOXA4	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr5_+_66254698_66254885	0.316824	HOXA4	ENST00000405643.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000407621.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000432426.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr5_+_69321074_69321200	0.31498	HOXA4	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr5_+_67586465_67586534	0.296789	HOXA4	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr7_+_129015671_129015685	0.276507	HOXA4	ENST00000466993.1|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr18_+_13612613_13612630	0.275604	HOXA4	ENST00000586765.1|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr2_-_187367356_187367356	0.272274	HOXA4	ENST00000595956.1|AC018867.2|ENSG00000268846.1|AC018867.2
hg19_v2_chr1_-_204329013_204329086	0.261113	HOXA4	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr14_+_101359265_101359265	0.256758	HOXA4	ENST00000599197.1|AL117190.3|ENSG00000269375.1|Esophagus cancer-related gene-2 interaction susceptibility protein; Uncharacterized protein
hg19_v2_chr14_+_39734482_39734542	0.249791	HOXA4	ENST00000554392.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000555716.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000341749.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000557038.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr3_-_178984759_178984790	0.244303	HOXA4	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr11_-_5080857_5080857	0.236254	HOXA4	ENST00000321522.2|OR52E2|ENSG00000176787.2|olfactory receptor, family 52, subfamily E, member 2
hg19_v2_chr17_+_37894570_37894614	0.234577	HOXA4	ENST00000394211.3|GRB7|ENSG00000141738.9|growth factor receptor-bound protein 7
hg19_v2_chr2_+_53994927_53994979	0.23445	HOXA4	ENST00000295304.4|CHAC2|ENSG00000143942.4|ChaC, cation transport regulator homolog 2 (E. coli)
hg19_v2_chr7_+_100273736_100273769	0.230788	HOXA4	ENST00000412215.1|GNB2|ENSG00000172354.5|guanine nucleotide binding protein (G protein), beta polypeptide 2 	ENST00000393924.1|GNB2|ENSG00000172354.5|guanine nucleotide binding protein (G protein), beta polypeptide 2
hg19_v2_chr18_-_28742813_28742824	0.229313	HOXA4	ENST00000257197.3|DSC1|ENSG00000134765.5|desmocollin 1 	ENST00000257198.5|DSC1|ENSG00000134765.5|desmocollin 1
hg19_v2_chr9_+_26746951_26747110	0.228564	HOXA4	ENST00000523363.1|RP11-18A15.1|ENSG00000254261.1|RP11-18A15.1
hg19_v2_chr5_+_140535577_140535577	0.215853	HOXA4	ENST00000539533.1|PCDHB17|ENSG00000255622.1|Protocadherin-psi1; Uncharacterized protein
hg19_v2_chr9_+_75263565_75263565	0.209355	HOXA4	ENST00000396237.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chr16_+_67280799_67280818	0.208346	HOXA4	ENST00000566345.2|SLC9A5|ENSG00000135740.12|solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5
hg19_v2_chr3_+_9774164_9774185	0.207818	HOXA4	ENST00000426583.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr10_-_101690650_101690753	0.190633	HOXA4	ENST00000543621.1|DNMBP|ENSG00000107554.11|dynamin binding protein
hg19_v2_chrX_-_84634708_84634722	0.181783	HOXA4	ENST00000373145.3|POF1B|ENSG00000124429.13|premature ovarian failure, 1B
hg19_v2_chr2_+_54683419_54683442	0.170791	HOXA4	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr12_-_10959892_10959892	0.168925	HOXA4	ENST00000240615.2|TAS2R8|ENSG00000121314.2|taste receptor, type 2, member 8
hg19_v2_chr3_-_188665428_188665478	0.166719	HOXA4	ENST00000444488.1|TPRG1-AS1|ENSG00000234076.1|TPRG1 antisense RNA 1
hg19_v2_chr7_+_8474817_8474830	0.163932	HOXA4	ENST00000429542.1|NXPH1|ENSG00000122584.8|neurexophilin 1
hg19_v2_chrX_+_129473859_129473904	0.15878	HOXA4	ENST00000424447.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr7_+_144052381_144052509	0.1349	HOXA4	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr21_+_22370717_22370882	0.131359	HOXA4	ENST00000284894.7|NCAM2|ENSG00000154654.10|neural cell adhesion molecule 2
hg19_v2_chr13_-_28545276_28545276	0.113068	HOXA4	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr12_+_53818855_53818919	0.105223	HOXA4	ENST00000550839.1|AMHR2|ENSG00000135409.6|anti-Mullerian hormone receptor, type II
hg19_v2_chr12_-_24097236_24097286	0.0970067	HOXA4	ENST00000538083.1|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr3_+_108855558_108855733	0.0959042	HOXA4	ENST00000467240.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000477643.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000479039.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000593799.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1
hg19_v2_chr5_-_13944652_13944652	0.0958643	HOXA4	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr15_+_80351977_80352061	0.0869783	HOXA4	ENST00000559157.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561012.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000564367.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558494.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr18_-_658244_658340	0.0844009	HOXA4	ENST00000585033.1|C18orf56|ENSG00000176912.3|chromosome 18 open reading frame 56 	ENST00000323813.3|C18orf56|ENSG00000176912.3|chromosome 18 open reading frame 56
hg19_v2_chr8_-_95449155_95449188	0.078395	HOXA4	ENST00000481490.2|FSBP|ENSG00000265817.1|fibrinogen silencer binding protein
hg19_v2_chr7_-_27170352_27170418	0.0772522	HOXA4	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr5_+_152870287_152870376	0.0718086	HOXA4	ENST00000340592.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr19_-_893200_893222	0.0670972	HOXA4	ENST00000269814.4|MED16|ENSG00000175221.10|mediator complex subunit 16 	ENST00000395808.3|MED16|ENSG00000175221.10|mediator complex subunit 16 	ENST00000312090.6|MED16|ENSG00000175221.10|mediator complex subunit 16 	ENST00000325464.1|MED16|ENSG00000175221.10|mediator complex subunit 16
hg19_v2_chr15_-_33447055_33447241	0.0489515	HOXA4	ENST00000559047.1|FMN1|ENSG00000248905.4|formin 1 	ENST00000561249.1|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr1_-_159832438_159832449	0.0407456	HOXA4	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr7_-_130598059_130598070	0.0384159	HOXA4	ENST00000432045.2|MIR29B1|ENSG00000226380.3|microRNA 29a
hg19_v2_chr5_+_152870215_152870251	0.0248863	HOXA4	ENST00000518142.1|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr2_+_171571827_171571861	0.0151507	HOXA4	ENST00000375281.3|SP5|ENSG00000204335.3|Sp5 transcription factor
hg19_v2_chr12_-_120241187_120241310	0.000871204	HOXA4	ENST00000392520.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
