hg19_v2_chr12_-_11463353_11463372	3.76077	HOXD9	ENST00000279575.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000535904.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000445719.2|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4
hg19_v2_chr4_-_76944621_76944671	3.68811	HOXD9	ENST00000306602.1|CXCL10|ENSG00000169245.4|chemokine (C-X-C motif) ligand 10
hg19_v2_chr6_-_52774464_52774499	3.13456	HOXD9	ENST00000370968.1|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3 	ENST00000211122.3|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3
hg19_v2_chr12_-_11002063_11002081	2.94755	HOXD9	ENST00000544994.1|PRR4|ENSG00000111215.7|proline rich 4 (lacrimal) 	ENST00000228811.4|PRR4|ENSG00000111215.7|proline rich 4 (lacrimal) 	ENST00000540107.1|PRR4|ENSG00000111215.7|proline rich 4 (lacrimal)
hg19_v2_chr11_-_5255861_5255888	2.59241	HOXD9	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr5_+_94727048_94727074	2.46536	HOXD9	ENST00000283357.5|FAM81B|ENSG00000153347.5|family with sequence similarity 81, member B
hg19_v2_chr18_+_61554932_61554993	2.39584	HOXD9	ENST00000299502.4|SERPINB2|ENSG00000197632.4|serpin peptidase inhibitor, clade B (ovalbumin), member 2 	ENST00000457692.1|SERPINB2|ENSG00000197632.4|serpin peptidase inhibitor, clade B (ovalbumin), member 2 	ENST00000413956.1|SERPINB2|ENSG00000197632.4|serpin peptidase inhibitor, clade B (ovalbumin), member 2
hg19_v2_chr4_+_74606223_74606293	2.3445	HOXD9	ENST00000307407.3|IL8|ENSG00000169429.6|interleukin 8 	ENST00000401931.1|IL8|ENSG00000169429.6|interleukin 8
hg19_v2_chr21_+_17792672_17792775	2.33478	HOXD9	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr17_+_61151306_61151320	2.32031	HOXD9	ENST00000580068.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000580466.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr7_-_16921601_16921614	2.1453	HOXD9	ENST00000402239.3|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000310398.2|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000414935.1|AGR3|ENSG00000173467.4|anterior gradient 3
hg19_v2_chr2_+_181988620_181988686	2.04408	HOXD9	ENST00000428474.1|AC104820.2|ENSG00000234663.1|AC104820.2	ENST00000424655.1|AC104820.2|ENSG00000234663.1|AC104820.2
hg19_v2_chr1_+_192127578_192127613	1.85576	HOXD9	ENST00000367460.3|RGS18|ENSG00000150681.5|regulator of G-protein signaling 18
hg19_v2_chr11_-_104972158_104972190	1.82203	HOXD9	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr6_-_49681235_49681274	1.79571	HOXD9	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr2_+_143635067_143635211	1.71	HOXD9	ENST00000264170.4|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr2_+_89986318_89986323	1.66566	HOXD9	ENST00000491977.1|IGKV2D-29|ENSG00000243264.1|immunoglobulin kappa variable 2D-29
hg19_v2_chr2_+_90024732_90024732	1.62525	HOXD9	ENST00000390268.2|IGKV2D-26|ENSG00000211623.2|immunoglobulin kappa variable 2D-26
hg19_v2_chr7_-_38289173_38289173	1.57916	HOXD9	ENST00000436911.2|TRGC2|ENSG00000227191.2|T cell receptor gamma constant 2
hg19_v2_chr8_-_86253888_86253944	1.54952	HOXD9	ENST00000522389.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000432364.2|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517618.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr6_-_133055815_133055834	1.52623	HOXD9	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr22_-_30642728_30642754	1.52032	HOXD9	ENST00000403987.3|LIF|ENSG00000128342.4|leukemia inhibitory factor
hg19_v2_chr17_+_9479944_9479965	1.49146	HOXD9	ENST00000396219.3|WDR16|ENSG00000166596.10|WD repeat domain 16 	ENST00000352665.5|WDR16|ENSG00000166596.10|WD repeat domain 16
hg19_v2_chr2_-_158345462_158345480	1.4725	HOXD9	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr2_+_90198535_90198535	1.46824	HOXD9	ENST00000390276.2|IGKV1D-12|ENSG00000240834.1|immunoglobulin kappa variable 1D-12
hg19_v2_chr1_-_59043166_59043166	1.46183	HOXD9	ENST00000371225.2|TACSTD2|ENSG00000184292.5|tumor-associated calcium signal transducer 2
hg19_v2_chr2_-_158345341_158345449	1.44339	HOXD9	ENST00000435117.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr3_-_167191814_167191842	1.44255	HOXD9	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chrY_+_15815447_15815447	1.41807	HOXD9	ENST00000284856.3|TMSB4Y|ENSG00000154620.5|thymosin beta 4, Y-linked
hg19_v2_chr15_+_58430368_58430401	1.40568	HOXD9	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr15_+_58430567_58430589	1.39891	HOXD9	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr4_-_76928641_76928668	1.36656	HOXD9	ENST00000264888.5|CXCL9|ENSG00000138755.5|chemokine (C-X-C motif) ligand 9
hg19_v2_chr1_+_198608292_198608340	1.34263	HOXD9	ENST00000418674.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C
hg19_v2_chr12_+_9980069_9980087	1.3228	HOXD9	ENST00000354855.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000324214.4|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000279544.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr10_+_115511213_115511272	1.29933	HOXD9	ENST00000361048.1|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr5_+_142286887_142286918	1.28827	HOXD9	ENST00000451259.1|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr6_-_32634425_32634479	1.27732	HOXD9	ENST00000399082.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000399079.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000374943.4|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000434651.2|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1
hg19_v2_chr8_-_16424871_16425011	1.25743	HOXD9	ENST00000518026.1|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
hg19_v2_chr14_+_92789498_92789537	1.23842	HOXD9	ENST00000531433.1|SLC24A4|ENSG00000140090.13|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
hg19_v2_chr1_+_198608146_198608247	1.22083	HOXD9	ENST00000367376.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000352140.3|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000594404.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000598951.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000530727.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000442510.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367367.4|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000348564.6|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367364.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000413409.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C
hg19_v2_chr6_-_49712123_49712134	1.21706	HOXD9	ENST00000263045.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr6_+_6588316_6588341	1.19491	HOXD9	ENST00000379953.2|LY86|ENSG00000112799.4|lymphocyte antigen 86
hg19_v2_chr22_+_22749343_22749360	1.19165	HOXD9	ENST00000390298.2|IGLV7-43|ENSG00000211652.2|immunoglobulin lambda variable 7-43
hg19_v2_chr12_+_119772502_119772522	1.18908	HOXD9	ENST00000536742.1|CCDC60|ENSG00000183273.2|coiled-coil domain containing 60 	ENST00000327554.2|CCDC60|ENSG00000183273.2|coiled-coil domain containing 60
hg19_v2_chr14_-_106725723_106725742	1.17497	HOXD9	ENST00000390609.2|IGHV3-23|ENSG00000211949.2|immunoglobulin heavy variable 3-23
hg19_v2_chr3_+_178276488_178276655	1.16636	HOXD9	ENST00000432997.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000455865.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr17_-_38020379_38020390	1.14654	HOXD9	ENST00000351680.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000346243.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000350532.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000467757.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439016.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr19_-_19739321_19739366	1.13344	HOXD9	ENST00000588461.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr7_-_121944491_121944705	1.12734	HOXD9	ENST00000331178.4|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000427185.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000442488.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1
hg19_v2_chrY_+_14958970_14958970	1.12546	HOXD9	ENST00000453031.1|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr2_-_89278535_89278600	1.12332	HOXD9	ENST00000390247.2|IGKV3-7|ENSG00000243063.1|immunoglobulin kappa variable 3-7 (non-functional)
hg19_v2_chr12_+_9980113_9980133	1.11609	HOXD9	ENST00000537723.1|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr13_-_47012325_47012366	1.11451	HOXD9	ENST00000409879.2|KIAA0226L|ENSG00000102445.14|KIAA0226-like
hg19_v2_chr1_+_198607801_198607849	1.10793	HOXD9	ENST00000367379.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C
hg19_v2_chr2_+_143635222_143635240	1.06994	HOXD9	ENST00000375773.2|KYNU|ENSG00000115919.10|kynureninase 	ENST00000409512.1|KYNU|ENSG00000115919.10|kynureninase 	ENST00000410015.2|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr6_+_32812568_32812631	1.03928	HOXD9	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr10_+_5406935_5406972	1.02946	HOXD9	ENST00000380433.3|UCN3|ENSG00000178473.5|urocortin 3
hg19_v2_chrX_+_36246735_36246735	1.02703	HOXD9	ENST00000378653.3|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr3_+_182511266_182511308	1.00924	HOXD9	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chr3_-_157221128_157221216	1.00263	HOXD9	ENST00000392833.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1 	ENST00000362010.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr1_+_45140360_45140399	0.999716	HOXD9	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr3_-_27498235_27498278	0.982767	HOXD9	ENST00000295736.5|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428386.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428179.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg19_v2_chr15_+_49715449_49715464	0.97315	HOXD9	ENST00000560979.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chrX_+_135730297_135730352	0.969566	HOXD9	ENST00000370629.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chrX_+_36254051_36254051	0.954111	HOXD9	ENST00000378657.4|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chrX_+_36053908_36053908	0.942439	HOXD9	ENST00000378660.2|CHDC2|ENSG00000176034.8|calponin homology domain containing 2
hg19_v2_chr12_-_10607084_10607284	0.939376	HOXD9	ENST00000408006.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000544822.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000536188.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr11_-_104905840_104905977	0.935125	HOXD9	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr4_+_71384257_71384295	0.921827	HOXD9	ENST00000339336.4|AMTN|ENSG00000187689.5|amelotin
hg19_v2_chr3_-_167371704_167371736	0.897153	HOXD9	ENST00000488012.1|WDR49|ENSG00000174776.6|WD repeat domain 49
hg19_v2_chr21_-_31588365_31588398	0.888896	HOXD9	ENST00000399899.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr7_-_122339162_122339210	0.871788	HOXD9	ENST00000340112.2|RNF133|ENSG00000188050.2|ring finger protein 133
hg19_v2_chr6_-_10115007_10115007	0.871451	HOXD9	ENST00000485268.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr5_-_39274617_39274636	0.859478	HOXD9	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr18_+_616672_616681	0.852028	HOXD9	ENST00000338387.7|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr3_+_130162328_130162328	0.847868	HOXD9	ENST00000512482.1|COL6A5|ENSG00000172752.10|collagen, type VI, alpha 5
hg19_v2_chr6_-_47445214_47445308	0.83553	HOXD9	ENST00000604014.1|RP11-385F7.1|ENSG00000270761.1|RP11-385F7.1
hg19_v2_chr6_+_13272904_13272989	0.831184	HOXD9	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr14_+_62164340_62164443	0.830648	HOXD9	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr17_+_54230819_54230871	0.812745	HOXD9	ENST00000318698.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1 	ENST00000566473.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v2_chr7_-_36764004_36764059	0.794929	HOXD9	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr14_+_22615942_22615970	0.794164	HOXD9	ENST00000390457.2|TRAV27|ENSG00000211809.2|T cell receptor alpha variable 27
hg19_v2_chr3_-_116163830_116163855	0.786867	HOXD9	ENST00000333617.4|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chrX_+_135730373_135730399	0.765946	HOXD9	ENST00000370628.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chr2_-_188312971_188312987	0.745399	HOXD9	ENST00000410068.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000447403.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000410102.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like
hg19_v2_chr19_+_10397648_10397690	0.743698	HOXD9	ENST00000340992.4|ICAM4|ENSG00000105371.8|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) 	ENST00000393717.2|ICAM4|ENSG00000105371.8|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)
hg19_v2_chr6_+_15401075_15401095	0.721289	HOXD9	ENST00000541660.1|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr4_+_39640787_39640834	0.7198	HOXD9	ENST00000532680.1|RP11-539G18.2|ENSG00000255458.1|RP11-539G18.2
hg19_v2_chr3_-_157221380_157221415	0.716904	HOXD9	ENST00000468233.1|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr7_+_135710494_135710509	0.716163	HOXD9	ENST00000440744.2|AC024084.1|ENSG00000230649.2|AC024084.1
hg19_v2_chr11_-_104827425_104827425	0.714014	HOXD9	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr6_+_1312675_1312701	0.713728	HOXD9	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr18_+_616711_616720	0.712798	HOXD9	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr1_+_16083098_16083119	0.709034	HOXD9	ENST00000496928.2|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000508310.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr4_+_71296204_71296214	0.70424	HOXD9	ENST00000413702.1|MUC7|ENSG00000171195.6|mucin 7, secreted
hg19_v2_chr4_+_169633310_169633344	0.703294	HOXD9	ENST00000510998.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr5_+_121465234_121465263	0.701083	HOXD9	ENST00000504912.1|ZNF474|ENSG00000164185.4|zinc finger protein 474 	ENST00000505843.1|ZNF474|ENSG00000164185.4|zinc finger protein 474
hg19_v2_chr7_+_5920429_5920429	0.700092	HOXD9	ENST00000242104.5|OCM|ENSG00000122543.6|oncomodulin
hg19_v2_chr19_+_55014013_55014052	0.697121	HOXD9	ENST00000301202.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr5_-_111093167_111093252	0.696303	HOXD9	ENST00000446294.2|NREP|ENSG00000134986.9|neuronal regeneration related protein 	ENST00000419114.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr4_-_68749745_68749756	0.693548	HOXD9	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr11_+_92085262_92085262	0.692686	HOXD9	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr2_+_143886877_143886888	0.691557	HOXD9	ENST00000295095.6|ARHGAP15|ENSG00000075884.8|Rho GTPase activating protein 15
hg19_v2_chr9_+_12693336_12693460	0.690365	HOXD9	ENST00000381137.2|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1 	ENST00000388918.5|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1
hg19_v2_chr1_+_152956549_152956566	0.685348	HOXD9	ENST00000307122.2|SPRR1A|ENSG00000169474.3|small proline-rich protein 1A
hg19_v2_chr19_+_55385682_55385717	0.682887	HOXD9	ENST00000391726.3|FCAR|ENSG00000186431.14|Fc fragment of IgA, receptor for
hg19_v2_chr2_+_114647504_114647557	0.675606	HOXD9	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr2_+_185463093_185463181	0.674574	HOXD9	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr17_-_29645836_29645853	0.671309	HOXD9	ENST00000578584.1|CTD-2370N5.3|ENSG00000265118.1|CTD-2370N5.3
hg19_v2_chr13_-_99959641_99959660	0.66048	HOXD9	ENST00000376414.4|GPR183|ENSG00000169508.6|G protein-coupled receptor 183
hg19_v2_chr4_-_84035868_84035897	0.65377	HOXD9	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr4_-_144940477_144940541	0.645107	HOXD9	ENST00000513128.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000429670.2|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000502664.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group)
hg19_v2_chr3_+_111393501_111393538	0.641626	HOXD9	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr4_-_36245561_36245601	0.639939	HOXD9	ENST00000506189.1|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr8_-_66701319_66701330	0.638905	HOXD9	ENST00000379419.4|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr18_-_24443151_24443163	0.636768	HOXD9	ENST00000440832.3|AQP4|ENSG00000171885.9|aquaporin 4
hg19_v2_chr12_-_91546926_91546972	0.636009	HOXD9	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr18_-_5396271_5396333	0.627727	HOXD9	ENST00000579951.1|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr14_-_67955426_67955460	0.625387	HOXD9	ENST00000554480.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr17_+_61086917_61086921	0.624976	HOXD9	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr1_+_15668240_15668263	0.619515	HOXD9	ENST00000444385.1|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1
hg19_v2_chr2_+_210518057_210518117	0.619141	HOXD9	ENST00000452717.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr14_-_68000442_68000456	0.616484	HOXD9	ENST00000554278.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr1_-_236046872_236046882	0.611474	HOXD9	ENST00000536965.1|LYST|ENSG00000143669.9|lysosomal trafficking regulator
hg19_v2_chr19_+_55014085_55014123	0.604	HOXD9	ENST00000351841.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr1_+_82165350_82165455	0.602076	HOXD9	ENST00000359929.3|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr12_-_10007448_10007448	0.596312	HOXD9	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr4_-_84035905_84035955	0.586328	HOXD9	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr4_+_75174180_75174196	0.583542	HOXD9	ENST00000413830.1|EPGN|ENSG00000182585.5|epithelial mitogen
hg19_v2_chr21_-_39705323_39705343	0.57766	HOXD9	ENST00000436845.1|AP001422.3|ENSG00000231231.1|AP001422.3
hg19_v2_chr10_-_49459800_49459841	0.574212	HOXD9	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr12_-_95510743_95510753	0.572276	HOXD9	ENST00000551521.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr14_+_23709555_23709555	0.566607	HOXD9	ENST00000430154.2|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr1_+_172745006_172745045	0.559784	HOXD9	ENST00000432694.2|RP1-15D23.2|ENSG00000224228.2|RP1-15D23.2
hg19_v2_chr4_+_88720698_88720733	0.5557	HOXD9	ENST00000226284.5|IBSP|ENSG00000029559.5|integrin-binding sialoprotein
hg19_v2_chr4_+_175839551_175839567	0.549742	HOXD9	ENST00000404450.4|ADAM29|ENSG00000168594.11|ADAM metallopeptidase domain 29 	ENST00000514159.1|ADAM29|ENSG00000168594.11|ADAM metallopeptidase domain 29
hg19_v2_chr13_+_33160553_33160564	0.545182	HOXD9	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr1_+_16083123_16083144	0.536447	HOXD9	ENST00000510393.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000430076.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr20_-_13971255_13971264	0.533371	HOXD9	ENST00000284951.5|SEL1L2|ENSG00000101251.7|sel-1 suppressor of lin-12-like 2 (C. elegans) 	ENST00000378072.5|SEL1L2|ENSG00000101251.7|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg19_v2_chr6_-_131321863_131321907	0.530667	HOXD9	ENST00000528282.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr15_-_55562582_55562617	0.528331	HOXD9	ENST00000396307.2|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr3_+_107318157_107318172	0.519764	HOXD9	ENST00000406780.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr11_-_128457446_128457461	0.517177	HOXD9	ENST00000392668.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr22_+_50609150_50609199	0.509597	HOXD9	ENST00000159647.5|PANX2|ENSG00000073150.9|pannexin 2 	ENST00000395842.2|PANX2|ENSG00000073150.9|pannexin 2
hg19_v2_chr1_+_160370344_160370406	0.503516	HOXD9	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr2_-_163695128_163695158	0.502856	HOXD9	ENST00000332142.5|KCNH7|ENSG00000184611.7|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v2_chr9_-_138391692_138391741	0.50284	HOXD9	ENST00000429260.2|C9orf116|ENSG00000160345.8|chromosome 9 open reading frame 116
hg19_v2_chrX_-_125686784_125686834	0.489619	HOXD9	ENST00000371126.1|DCAF12L1|ENSG00000198889.3|DDB1 and CUL4 associated factor 12-like 1
hg19_v2_chr10_-_29084886_29085042	0.488491	HOXD9	ENST00000608061.1|LINC00837|ENSG00000235824.3|long intergenic non-protein coding RNA 837 	ENST00000443246.2|LINC00837|ENSG00000235824.3|long intergenic non-protein coding RNA 837 	ENST00000446012.1|LINC00837|ENSG00000235824.3|long intergenic non-protein coding RNA 837
hg19_v2_chr6_-_39399087_39399150	0.485929	HOXD9	ENST00000229913.5|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000541946.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000394362.1|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chr12_-_15104040_15104114	0.485468	HOXD9	ENST00000541644.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta 	ENST00000545895.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr1_-_26231589_26231635	0.484573	HOXD9	ENST00000374291.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr7_+_93535866_93535906	0.482797	HOXD9	ENST00000429473.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000430875.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000428834.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr8_-_25281747_25281779	0.482141	HOXD9	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr11_-_78052923_78052949	0.47875	HOXD9	ENST00000340149.2|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2
hg19_v2_chr1_+_81771806_81771876	0.478474	HOXD9	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr12_+_14369524_14369592	0.477945	HOXD9	ENST00000538329.1|RP11-134N1.2|ENSG00000256084.1|RP11-134N1.2
hg19_v2_chr14_+_23654525_23654545	0.465493	HOXD9	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr1_-_48937821_48937832	0.464647	HOXD9	ENST00000396199.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr14_+_22631122_22631139	0.463459	HOXD9	ENST00000390458.3|TRAV29DV5|ENSG00000211810.3|T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene)
hg19_v2_chr5_+_140588269_140588299	0.461991	HOXD9	ENST00000541609.1|PCDHB12|ENSG00000120328.4|protocadherin beta 12 	ENST00000239450.2|PCDHB12|ENSG00000120328.4|protocadherin beta 12
hg19_v2_chr2_+_191334212_191334242	0.459766	HOXD9	ENST00000444317.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000535751.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr18_-_53069419_53069471	0.452202	HOXD9	ENST00000570177.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr14_-_38028689_38028726	0.450448	HOXD9	ENST00000553425.1|RP11-356O9.2|ENSG00000259087.1|RP11-356O9.2
hg19_v2_chr4_+_71384300_71384314	0.449924	HOXD9	ENST00000504451.1|AMTN|ENSG00000187689.5|amelotin
hg19_v2_chr10_-_105845674_105845760	0.447711	HOXD9	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr9_-_5084580_5084580	0.446358	HOXD9	ENST00000601793.1|AL161450.1|ENSG00000268155.1|Uncharacterized protein
hg19_v2_chr2_-_89160117_89160117	0.445361	HOXD9	ENST00000390238.2|IGKJ5|ENSG00000211593.2|immunoglobulin kappa joining 5
hg19_v2_chr7_-_80141328_80141339	0.443675	HOXD9	ENST00000398291.3|GNAT3|ENSG00000214415.3|guanine nucleotide binding protein, alpha transducing 3
hg19_v2_chr6_+_130339710_130339745	0.441996	HOXD9	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr14_+_65878650_65878661	0.439623	HOXD9	ENST00000555559.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v2_chr2_+_25015968_25016029	0.438999	HOXD9	ENST00000380834.2|CENPO|ENSG00000138092.6|centromere protein O 	ENST00000473706.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr10_-_99030395_99030434	0.430376	HOXD9	ENST00000355366.5|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000371027.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr4_+_69313145_69313167	0.428894	HOXD9	ENST00000305363.4|TMPRSS11E|ENSG00000087128.5|transmembrane protease, serine 11E
hg19_v2_chr19_-_56826157_56826294	0.426646	HOXD9	ENST00000592509.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000592679.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000588442.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000593106.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000587492.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000254165.3|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A
hg19_v2_chrX_+_12993336_12993363	0.423133	HOXD9	ENST00000380635.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr7_+_93535817_93535822	0.422815	HOXD9	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chrX_+_123097014_123097033	0.41673	HOXD9	ENST00000394478.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr1_-_39339777_39339777	0.413081	HOXD9	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr17_+_57233087_57233146	0.40786	HOXD9	ENST00000578777.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000577457.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000582995.1|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr17_-_71223839_71223887	0.405228	HOXD9	ENST00000579872.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000580032.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr14_-_81425828_81425857	0.4024	HOXD9	ENST00000555529.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556042.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556981.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr3_+_140981456_140981508	0.400934	HOXD9	ENST00000504264.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chr17_-_39646116_39646164	0.395772	HOXD9	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr6_-_74231444_74231623	0.393903	HOXD9	ENST00000331523.2|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1 	ENST00000356303.2|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr14_+_57671888_57671888	0.393181	HOXD9	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chrX_-_10645724_10645735	0.389471	HOXD9	ENST00000413894.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr2_-_70417827_70417854	0.386489	HOXD9	ENST00000457952.1|C2orf42|ENSG00000115998.3|chromosome 2 open reading frame 42
hg19_v2_chr14_+_23002427_23002445	0.38192	HOXD9	ENST00000390527.1|TRAJ10|ENSG00000211879.1|T cell receptor alpha joining 10
hg19_v2_chr17_+_68071389_68071426	0.369274	HOXD9	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_-_112564797_112564797	0.365098	HOXD9	ENST00000398214.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like 	ENST00000448932.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like
hg19_v2_chr15_+_66797627_66797684	0.364928	HOXD9	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr13_-_81801115_81801122	0.357001	HOXD9	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr3_+_94657118_94657130	0.355032	HOXD9	ENST00000466089.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879 	ENST00000470465.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879
hg19_v2_chr12_+_9144626_9144666	0.351806	HOXD9	ENST00000543895.1|KLRG1|ENSG00000139187.5|killer cell lectin-like receptor subfamily G, member 1
hg19_v2_chr10_-_8095412_8095449	0.351607	HOXD9	ENST00000458727.1|RP11-379F12.3|ENSG00000243350.1|RP11-379F12.3	ENST00000355358.1|GATA3-AS1|ENSG00000197308.4|GATA3 antisense RNA 1
hg19_v2_chr2_-_175712270_175712316	0.334439	HOXD9	ENST00000295497.7|CHN1|ENSG00000128656.9|chimerin 1 	ENST00000444394.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr15_+_52155001_52155035	0.333931	HOXD9	ENST00000544199.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr9_-_215744_215893	0.333565	HOXD9	ENST00000382387.2|C9orf66|ENSG00000183784.5|chromosome 9 open reading frame 66
hg19_v2_chr1_+_146373546_146373600	0.331198	HOXD9	ENST00000446760.2|NBPF12|ENSG00000186275.7|neuroblastoma breakpoint family, member 12
hg19_v2_chr8_+_86089619_86089653	0.329029	HOXD9	ENST00000256117.5|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding 	ENST00000416274.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chrX_-_52258669_52258669	0.327073	HOXD9	ENST00000441417.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr7_-_92777606_92777723	0.326458	HOXD9	ENST00000437805.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446959.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000439952.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000414791.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446033.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000411955.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000318238.4|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like
hg19_v2_chr1_+_197881592_197881635	0.323091	HOXD9	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr22_-_32651326_32651340	0.322387	HOXD9	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr11_+_93754513_93754538	0.320927	HOXD9	ENST00000315765.9|HEPHL1|ENSG00000181333.11|hephaestin-like 1
hg19_v2_chr9_-_75488984_75489052	0.319356	HOXD9	ENST00000423171.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000449235.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000453787.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1
hg19_v2_chr12_+_41136144_41136158	0.318847	HOXD9	ENST00000548005.1|CNTN1|ENSG00000018236.10|contactin 1 	ENST00000552248.1|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr22_-_41682172_41682255	0.31468	HOXD9	ENST00000356244.3|RANGAP1|ENSG00000100401.15|Ran GTPase activating protein 1
hg19_v2_chr8_-_22785404_22785433	0.306094	HOXD9	ENST00000256404.6|PEBP4|ENSG00000134020.6|phosphatidylethanolamine-binding protein 4
hg19_v2_chr20_-_20693131_20693268	0.305127	HOXD9	ENST00000202677.7|RALGAPA2|ENSG00000188559.9|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v2_chr9_-_71629010_71629040	0.304464	HOXD9	ENST00000377276.2|PRKACG|ENSG00000165059.5|protein kinase, cAMP-dependent, catalytic, gamma
hg19_v2_chr19_-_53466095_53466164	0.303552	HOXD9	ENST00000391786.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000434371.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000357666.4|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000438970.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000270457.4|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000535506.1|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000444460.2|ZNF816|ENSG00000180257.8|zinc finger protein 816 	ENST00000457013.2|ZNF816|ENSG00000180257.8|zinc finger protein 816
hg19_v2_chrY_-_13524717_13524717	0.302415	HOXD9	ENST00000331172.6|SLC9B1P1|ENSG00000183704.6|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 pseudogene 1
hg19_v2_chr15_+_66797455_66797483	0.298092	HOXD9	ENST00000446801.2|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr4_-_164534657_164534701	0.297323	HOXD9	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr7_-_91794590_91794590	0.292597	HOXD9	ENST00000430130.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1 	ENST00000454089.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1
hg19_v2_chr4_-_39640513_39640529	0.288844	HOXD9	ENST00000511809.1|SMIM14|ENSG00000163683.7|small integral membrane protein 14 	ENST00000505729.1|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr2_-_166702601_166702625	0.286609	HOXD9	ENST00000428888.1|AC009495.4|ENSG00000229195.1|AC009495.4
hg19_v2_chr9_-_39239171_39239171	0.286567	HOXD9	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr19_+_45843994_45844015	0.285104	HOXD9	ENST00000391946.2|KLC3|ENSG00000104892.12|kinesin light chain 3
hg19_v2_chr11_+_123986069_123986169	0.282689	HOXD9	ENST00000456829.2|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000361352.5|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000449321.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392748.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000360334.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392744.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A
hg19_v2_chr4_-_68749699_68749725	0.281267	HOXD9	ENST00000545541.1|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr9_-_28670283_28670283	0.280207	HOXD9	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chrX_+_52513455_52513455	0.276982	HOXD9	ENST00000446098.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr4_-_144826682_144826716	0.276243	HOXD9	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr4_-_120225600_120225600	0.267896	HOXD9	ENST00000399075.4|C4orf3|ENSG00000164096.10|chromosome 4 open reading frame 3
hg19_v2_chr17_+_68071458_68071481	0.26773	HOXD9	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_+_94657086_94657107	0.267664	HOXD9	ENST00000463200.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879
hg19_v2_chr6_+_45390222_45390298	0.262296	HOXD9	ENST00000359524.5|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr1_+_16083154_16083168	0.261037	HOXD9	ENST00000375771.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr5_-_159766528_159766580	0.260622	HOXD9	ENST00000505287.2|CCNJL|ENSG00000135083.10|cyclin J-like
hg19_v2_chr7_-_35013217_35013217	0.258172	HOXD9	ENST00000446375.1|DPY19L1|ENSG00000173852.9|dpy-19-like 1 (C. elegans)
hg19_v2_chr1_-_48937838_48937905	0.25647	HOXD9	ENST00000371847.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr2_+_27282134_27282228	0.252902	HOXD9	ENST00000441931.1|AGBL5|ENSG00000084693.11|ATP/GTP binding protein-like 5
hg19_v2_chr7_+_120629653_120629833	0.252792	HOXD9	ENST00000450913.2|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1 	ENST00000340646.5|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1
hg19_v2_chr17_+_75181292_75181298	0.252462	HOXD9	ENST00000431431.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr15_+_76352178_76352306	0.25149	HOXD9	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chr17_-_29641084_29641103	0.2503	HOXD9	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr19_-_51143075_51143143	0.248836	HOXD9	ENST00000600079.1|SYT3|ENSG00000213023.5|synaptotagmin III 	ENST00000593901.1|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr1_-_95391315_95391357	0.245789	HOXD9	ENST00000545882.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000415017.1|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr11_+_63606373_63606418	0.242954	HOXD9	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr7_+_18536090_18536130	0.23656	HOXD9	ENST00000441986.1|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr21_-_39705286_39705316	0.234531	HOXD9	ENST00000414189.1|AP001422.3|ENSG00000231231.1|AP001422.3
hg19_v2_chr7_+_117864708_117864798	0.232206	HOXD9	ENST00000357099.4|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000265224.4|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000486422.1|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000417525.1|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7
hg19_v2_chr8_+_101349823_101349862	0.226415	HOXD9	ENST00000519566.1|KB-1991G8.1|ENSG00000253217.1|KB-1991G8.1
hg19_v2_chr4_-_185395191_185395340	0.225416	HOXD9	ENST00000510814.1|IRF2|ENSG00000168310.6|interferon regulatory factor 2 	ENST00000507523.1|IRF2|ENSG00000168310.6|interferon regulatory factor 2 	ENST00000506230.1|IRF2|ENSG00000168310.6|interferon regulatory factor 2
hg19_v2_chr1_-_213020991_213020991	0.22328	HOXD9	ENST00000332912.3|C1orf227|ENSG00000185523.6|chromosome 1 open reading frame 227
hg19_v2_chr2_+_173686303_173686325	0.222971	HOXD9	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr13_+_76413852_76413884	0.221644	HOXD9	ENST00000533809.2|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr4_+_71108300_71108323	0.218366	HOXD9	ENST00000304954.3|CSN3|ENSG00000171209.3|casein kappa
hg19_v2_chr6_+_63921351_63921386	0.215966	HOXD9	ENST00000370659.1|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr4_-_168155730_168155740	0.215881	HOXD9	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr10_-_105845536_105845581	0.214774	HOXD9	ENST00000393211.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr2_+_109223595_109223617	0.21286	HOXD9	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr8_-_71157595_71157616	0.212706	HOXD9	ENST00000519724.1|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr5_+_140180635_140180783	0.212592	HOXD9	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chrX_-_77150985_77151090	0.210912	HOXD9	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr20_+_5987890_5987904	0.207549	HOXD9	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr15_+_57998923_57998934	0.201293	HOXD9	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
hg19_v2_chr10_+_104613980_104613989	0.199688	HOXD9	ENST00000339834.5|C10orf32|ENSG00000166275.11|chromosome 10 open reading frame 32
hg19_v2_chr6_+_31021225_31021277	0.197879	HOXD9	ENST00000565192.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000562344.1|HCG22|ENSG00000228789.2|HLA complex group 22
hg19_v2_chr6_+_131894284_131894378	0.193366	HOXD9	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr2_+_28824786_28824791	0.191985	HOXD9	ENST00000541605.1|PLB1|ENSG00000163803.8|phospholipase B1
hg19_v2_chr7_+_10000640_10000651	0.185168	HOXD9	ENST00000451755.1|AC006373.1|ENSG00000235431.1|AC006373.1
hg19_v2_chr6_+_132455118_132455176	0.183177	HOXD9	ENST00000458028.1|LINC01013|ENSG00000228495.1|long intergenic non-protein coding RNA 1013
hg19_v2_chr5_+_68860949_68860949	0.18128	HOXD9	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr17_+_38516907_38516907	0.181126	HOXD9	ENST00000578774.1|CTD-2267D19.3|ENSG00000266208.1|Uncharacterized protein
hg19_v2_chr20_+_11008408_11008408	0.179793	HOXD9	ENST00000378252.1|C20orf187|ENSG00000125899.6|chromosome 20 open reading frame 187
hg19_v2_chr17_-_39191107_39191127	0.178654	HOXD9	ENST00000344363.5|KRTAP1-3|ENSG00000221880.2|keratin associated protein 1-3
hg19_v2_chr6_-_132967142_132967142	0.169789	HOXD9	ENST00000275216.1|TAAR1|ENSG00000146399.1|trace amine associated receptor 1
hg19_v2_chr13_+_51483814_51483935	0.16927	HOXD9	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chr10_-_28623368_28623415	0.167464	HOXD9	ENST00000441595.2|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr18_+_21452804_21452910	0.166601	HOXD9	ENST00000269217.6|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr6_-_50016364_50016364	0.164835	HOXD9	ENST00000322246.4|DEFB112|ENSG00000180872.4|defensin, beta 112
hg19_v2_chr1_+_87012753_87012767	0.163579	HOXD9	ENST00000370563.3|CLCA4|ENSG00000016602.8|chloride channel accessory 4
hg19_v2_chr11_+_124134723_124134723	0.162238	HOXD9	ENST00000524943.2|OR8G5|ENSG00000255298.2|olfactory receptor, family 8, subfamily G, member 5
hg19_v2_chr10_+_104614008_104614042	0.159477	HOXD9	ENST00000369883.3|C10orf32|ENSG00000166275.11|chromosome 10 open reading frame 32
hg19_v2_chr2_+_145780662_145780663	0.156943	HOXD9	ENST00000423031.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr1_-_146082633_146082765	0.156625	HOXD9	ENST00000605317.1|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11 	ENST00000604938.1|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11 	ENST00000339388.5|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11
hg19_v2_chr15_-_75748143_75748183	0.156463	HOXD9	ENST00000568431.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000568309.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000568190.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000570115.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000564778.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr9_-_107299137_107299137	0.155017	HOXD9	ENST00000374781.2|OR13C3|ENSG00000204246.2|olfactory receptor, family 13, subfamily C, member 3
hg19_v2_chr3_+_102153859_102153877	0.154258	HOXD9	ENST00000306176.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1 	ENST00000466937.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1
hg19_v2_chr12_-_90049828_90049847	0.153305	HOXD9	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr3_+_169539710_169539710	0.153304	HOXD9	ENST00000340806.6|LRRIQ4|ENSG00000188306.6|leucine-rich repeats and IQ motif containing 4
hg19_v2_chr1_+_87012922_87012932	0.152471	HOXD9	ENST00000263723.5|CLCA4|ENSG00000016602.8|chloride channel accessory 4
hg19_v2_chr16_+_21689835_21689835	0.151967	HOXD9	ENST00000286149.4|OTOA|ENSG00000155719.12|otoancorin 	ENST00000388958.3|OTOA|ENSG00000155719.12|otoancorin
hg19_v2_chr6_+_143759575_143759575	0.151815	HOXD9	ENST00000595616.1|AL031320.1|ENSG00000268402.1|AL031320.1
hg19_v2_chr13_+_46039037_46039126	0.147534	HOXD9	ENST00000349995.5|COG3|ENSG00000136152.10|component of oligomeric golgi complex 3
hg19_v2_chr17_-_46690839_46690884	0.146356	HOXD9	ENST00000498634.2|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr1_-_9953295_9953320	0.143385	HOXD9	ENST00000377258.1|CTNNBIP1|ENSG00000178585.10|catenin, beta interacting protein 1
hg19_v2_chr12_-_90049878_90049890	0.136685	HOXD9	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr16_-_52107814_52107814	0.135487	HOXD9	ENST00000562818.1|C16orf97|ENSG00000261190.1|chromosome 16 open reading frame 97
hg19_v2_chr11_-_102401469_102401488	0.133866	HOXD9	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr4_-_168155700_168155722	0.1296	HOXD9	ENST00000357545.4|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512648.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr4_+_15341442_15341589	0.127764	HOXD9	ENST00000397700.2|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000295297.4|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr1_-_241799232_241799232	0.124544	HOXD9	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr5_-_138775177_138775220	0.121776	HOXD9	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr3_-_100712292_100712338	0.121743	HOXD9	ENST00000495063.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000530539.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr14_-_52436247_52436247	0.121101	HOXD9	ENST00000597846.1|AL358333.1|ENSG00000267802.1|HCG2013195; Uncharacterized protein
hg19_v2_chr3_+_107364769_107364793	0.12108	HOXD9	ENST00000449271.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000425868.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000449213.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr15_-_75748115_75748126	0.118096	HOXD9	ENST00000360439.4|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chrX_-_77150911_77150960	0.115869	HOXD9	ENST00000373336.3|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr8_+_104892639_104892652	0.113746	HOXD9	ENST00000436393.2|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr1_+_101185290_101185320	0.109421	HOXD9	ENST00000370119.4|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000347652.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000294728.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000370115.1|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1
hg19_v2_chr14_+_62462541_62462541	0.108755	HOXD9	ENST00000430451.2|SYT16|ENSG00000139973.11|synaptotagmin XVI
hg19_v2_chr12_-_88974236_88974256	0.108104	HOXD9	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr7_-_5998714_5998714	0.106036	HOXD9	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr2_-_55647057_55647082	0.105549	HOXD9	ENST00000436346.1|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr9_+_124103625_124103625	0.105088	HOXD9	ENST00000594963.1|AL161784.1|ENSG00000267987.1|Uncharacterized protein
hg19_v2_chr12_-_30887948_30887997	0.10482	HOXD9	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr1_+_38022513_38022571	0.10476	HOXD9	ENST00000296218.7|DNALI1|ENSG00000163879.9|dynein, axonemal, light intermediate chain 1
hg19_v2_chr22_+_23487513_23487707	0.103254	HOXD9	ENST00000263116.2|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family 	ENST00000341989.4|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family
hg19_v2_chr3_-_139258521_139258671	0.10198	HOXD9	ENST00000483943.2|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular 	ENST00000232219.2|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular 	ENST00000492918.1|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular
hg19_v2_chr8_+_86089460_86089483	0.101899	HOXD9	ENST00000418930.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chrY_+_23698778_23698778	0.10063	HOXD9	ENST00000303902.5|RBMY1A1|ENSG00000234414.3|RNA binding motif protein, Y-linked, family 1, member A1
hg19_v2_chr1_-_111061797_111061797	0.100379	HOXD9	ENST00000369771.2|KCNA10|ENSG00000143105.5|potassium voltage-gated channel, shaker-related subfamily, member 10
hg19_v2_chr2_-_55646957_55647027	0.0995802	HOXD9	ENST00000263630.8|CCDC88A|ENSG00000115355.11|coiled-coil domain containing 88A
hg19_v2_chr8_-_20040638_20040717	0.0965921	HOXD9	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr14_+_65878565_65878632	0.0964882	HOXD9	ENST00000556518.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 	ENST00000557164.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v2_chr20_-_7238861_7238933	0.0930915	HOXD9	ENST00000428954.1|RP11-19D2.1|ENSG00000238102.1|RP11-19D2.1
hg19_v2_chr10_+_90354503_90354503	0.0924441	HOXD9	ENST00000531458.1|LIPJ|ENSG00000204022.5|lipase, family member J
hg19_v2_chr2_+_161993465_161993481	0.0910113	HOXD9	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr3_+_158787098_158787117	0.0902205	HOXD9	ENST00000397832.2|IQCJ|ENSG00000214216.6|IQ motif containing J 	ENST00000451172.1|IQCJ|ENSG00000214216.6|IQ motif containing J 	ENST00000482126.1|IQCJ|ENSG00000214216.6|IQ motif containing J
hg19_v2_chrX_+_135388147_135388181	0.0864473	HOXD9	ENST00000394141.1|GPR112|ENSG00000156920.6|G protein-coupled receptor 112
hg19_v2_chr2_+_210444748_210444770	0.0834599	HOXD9	ENST00000392194.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr1_+_109255279_109255279	0.0822659	HOXD9	ENST00000370017.3|FNDC7|ENSG00000143107.4|fibronectin type III domain containing 7
hg19_v2_chr1_+_81106951_81107001	0.0809859	HOXD9	ENST00000443565.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1
hg19_v2_chr11_-_46639436_46639466	0.0807632	HOXD9	ENST00000532281.1|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr10_+_86184676_86184714	0.0807055	HOXD9	ENST00000543283.1|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr16_+_22518495_22518495	0.0798466	HOXD9	ENST00000541154.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chrX_+_144908928_144908928	0.0707912	HOXD9	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chrX_+_48620147_48620164	0.0690949	HOXD9	ENST00000303227.6|GLOD5|ENSG00000171433.7|glyoxalase domain containing 5
hg19_v2_chr3_-_107777208_107777236	0.0679062	HOXD9	ENST00000398258.3|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr11_-_105010320_105010516	0.062846	HOXD9	ENST00000532895.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18 	ENST00000530950.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18
hg19_v2_chr17_-_54893250_54893278	0.0600679	HOXD9	ENST00000397862.2|C17orf67|ENSG00000214226.4|chromosome 17 open reading frame 67
hg19_v2_chr20_+_19870167_19870225	0.0595003	HOXD9	ENST00000440354.2|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr15_+_39311432_39311443	0.0570765	HOXD9	ENST00000560709.1|RP11-62C7.2|ENSG00000259278.1|RP11-62C7.2
hg19_v2_chr8_-_20040601_20040630	0.056858	HOXD9	ENST00000265808.7|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000522513.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr1_+_248616077_248616077	0.0568341	HOXD9	ENST00000342927.3|OR2T2|ENSG00000196240.2|olfactory receptor, family 2, subfamily T, member 2
hg19_v2_chr5_+_140207536_140207650	0.0558042	HOXD9	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr2_+_210517895_210518021	0.0554089	HOXD9	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr14_-_85705818_85705844	0.0528246	HOXD9	ENST00000556016.1|RP11-789A21.1|ENSG00000259044.1|RP11-789A21.1
hg19_v2_chr15_-_96831660_96831660	0.0476358	HOXD9	ENST00000378936.1|AC016251.1|ENSG00000205148.1|AC016251.1
hg19_v2_chr12_+_96196875_96196875	0.0458523	HOXD9	ENST00000553095.1|RP11-536G4.1|ENSG00000258292.1|Uncharacterized protein
hg19_v2_chr9_-_123812542_123812560	0.0445914	HOXD9	ENST00000223642.1|C5|ENSG00000106804.6|complement component 5
hg19_v2_chr12_-_118628315_118628348	0.0442427	HOXD9	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr11_+_89867803_89867906	0.0400644	HOXD9	ENST00000321955.4|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2 	ENST00000525171.1|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2 	ENST00000375944.3|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2
hg19_v2_chr9_+_20927764_20927855	0.0395582	HOXD9	ENST00000603044.1|FOCAD|ENSG00000188352.8|focadhesin 	ENST00000604254.1|FOCAD|ENSG00000188352.8|focadhesin
hg19_v2_chr8_+_119294456_119294486	0.0366774	HOXD9	ENST00000366457.2|AC023590.1|ENSG00000225885.2|Uncharacterized protein
hg19_v2_chr2_-_104496621_104496667	0.0349844	HOXD9	ENST00000455716.1|AC013727.1|ENSG00000232597.1|AC013727.1
hg19_v2_chr5_+_29143603_29143622	0.0314874	HOXD9	ENST00000602470.1|CTD-2118P12.1|ENSG00000259786.2|CTD-2118P12.1	ENST00000602801.1|CTD-2118P12.1|ENSG00000259786.2|CTD-2118P12.1
hg19_v2_chr3_+_107364683_107364736	0.0228617	HOXD9	ENST00000413213.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr2_-_136288113_136288301	0.0221383	HOXD9	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chr11_-_8986474_8986558	0.0218037	HOXD9	ENST00000525069.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr4_+_88529681_88529681	0.0217263	HOXD9	ENST00000399271.1|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chr7_-_107204706_107204797	0.021693	HOXD9	ENST00000393603.2|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr2_-_118943930_118943963	0.0182748	HOXD9	ENST00000449075.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000414886.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000449819.1|AC093901.1|ENSG00000226856.1|AC093901.1
hg19_v2_chr6_-_28220002_28220020	0.0182167	HOXD9	ENST00000377294.2|ZKSCAN4|ENSG00000187626.7|zinc finger with KRAB and SCAN domains 4
hg19_v2_chr3_-_100712352_100712361	0.015889	HOXD9	ENST00000471714.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000284322.5|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr8_-_117886955_117887105	0.0117342	HOXD9	ENST00000297338.2|RAD21|ENSG00000164754.8|RAD21 homolog (S. pombe)
hg19_v2_chr19_-_54618650_54618688	0.0117206	HOXD9	ENST00000391757.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr12_-_118628350_118628371	0.0110735	HOXD9	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr14_+_22133297_22133297	0.0106175	HOXD9	ENST00000408935.1|OR4E2|ENSG00000221977.1|olfactory receptor, family 4, subfamily E, member 2
hg19_v2_chr4_-_68829226_68829237	0.00475549	HOXD9	ENST00000396188.2|TMPRSS11A|ENSG00000187054.10|transmembrane protease, serine 11A
hg19_v2_chr14_+_22951276_22951276	0.00468128	HOXD9	ENST00000390484.1|TRAJ54|ENSG00000211836.1|T cell receptor alpha joining 54
hg19_v2_chr11_-_13517565_13517728	0.00344172	HOXD9	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr2_+_181988560_181988577	0.00164427	HOXD9	ENST00000424170.1|AC104820.2|ENSG00000234663.1|AC104820.2	ENST00000435411.1|AC104820.2|ENSG00000234663.1|AC104820.2
hg19_v2_chr3_+_107602030_107602095	0.00148203	HOXD9	ENST00000494231.1|LINC00636|ENSG00000240423.1|long intergenic non-protein coding RNA 636
