hg19_v2_chr12_+_16500599_16500731	3.10567	NKX1-1	ENST00000535309.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540056.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396209.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540126.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr12_+_16500571_16500598	3.08614	NKX1-1	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr12_+_16500037_16500076	2.98295	NKX1-1	ENST00000536371.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000010404.2|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr3_+_186560476_186560505	1.32402	NKX1-1	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr3_+_186560462_186560473	1.31202	NKX1-1	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr10_+_5238793_5238807	0.886869	NKX1-1	ENST00000263126.1|AKR1C4|ENSG00000198610.6|aldo-keto reductase family 1, member C4
hg19_v2_chr14_+_22670455_22670477	0.832721	NKX1-1	ENST00000390460.1|TRAV26-2|ENSG00000211812.1|T cell receptor alpha variable 26-2
hg19_v2_chr9_+_34646651_34646689	0.814497	NKX1-1	ENST00000378842.3|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase
hg19_v2_chr7_+_26331541_26331647	0.803052	NKX1-1	ENST00000416246.1|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000338523.4|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000412416.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr17_-_27418537_27418537	0.753304	NKX1-1	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr12_+_64798826_64798936	0.694131	NKX1-1	ENST00000540203.1|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr7_+_26331678_26331690	0.689749	NKX1-1	ENST00000446848.2|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr9_+_34646624_34646649	0.6717	NKX1-1	ENST00000450095.2|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase 	ENST00000556278.1|GALT|ENSG00000258728.1|Uncharacterized protein
hg19_v2_chr10_+_120789223_120789231	0.662272	NKX1-1	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr1_+_161691353_161691353	0.648129	NKX1-1	ENST00000367948.2|FCRLB|ENSG00000162746.10|Fc receptor-like B
hg19_v2_chr7_+_50348268_50348366	0.642413	NKX1-1	ENST00000438033.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000439701.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros)
hg19_v2_chr4_-_89442940_89442940	0.640818	NKX1-1	ENST00000527353.1|PIGY|ENSG00000255072.1|phosphatidylinositol glycan anchor biosynthesis, class Y
hg19_v2_chrX_+_19362011_19362122	0.600116	NKX1-1	ENST00000379806.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000545074.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000540249.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000423505.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000417819.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000422285.2|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000355808.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000379805.3|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr13_-_36050819_36050834	0.586809	NKX1-1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr2_-_47143160_47143251	0.584562	NKX1-1	ENST00000409800.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409218.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr1_-_21620877_21620963	0.55127	NKX1-1	ENST00000527991.1|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr2_-_47142884_47143007	0.522436	NKX1-1	ENST00000409105.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409973.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409913.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000319466.4|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr7_+_2559399_2559496	0.502423	NKX1-1	ENST00000222725.5|LFNG|ENSG00000106003.8|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 	ENST00000359574.3|LFNG|ENSG00000106003.8|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg19_v2_chr22_+_22730353_22730360	0.498553	NKX1-1	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg19_v2_chr6_-_167040693_167040725	0.479863	NKX1-1	ENST00000366863.2|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr6_-_82957433_82957477	0.473231	NKX1-1	ENST00000306270.7|IBTK|ENSG00000005700.10|inhibitor of Bruton agammaglobulinemia tyrosine kinase
hg19_v2_chr19_-_14228541_14228582	0.467422	NKX1-1	ENST00000590853.1|PRKACA|ENSG00000072062.9|protein kinase, cAMP-dependent, catalytic, alpha 	ENST00000308677.4|PRKACA|ENSG00000072062.9|protein kinase, cAMP-dependent, catalytic, alpha
hg19_v2_chr22_-_39151463_39151639	0.463632	NKX1-1	ENST00000405510.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000433561.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2
hg19_v2_chr22_+_41601209_41601355	0.459546	NKX1-1	ENST00000216237.5|L3MBTL2|ENSG00000100395.10|l(3)mbt-like 2 (Drosophila)
hg19_v2_chr2_+_8822113_8822196	0.458773	NKX1-1	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr5_+_66300464_66300505	0.456373	NKX1-1	ENST00000436277.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr10_+_99205894_99205954	0.452178	NKX1-1	ENST00000370854.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000393760.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000414567.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370846.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr3_+_158519654_158519944	0.442229	NKX1-1	ENST00000415822.2|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000392813.4|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000264266.8|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1
hg19_v2_chr10_-_99205607_99205779	0.439546	NKX1-1	ENST00000477692.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000485122.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370886.5|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370885.4|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370902.3|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370884.5|EXOSC1|ENSG00000171311.8|exosome component 1
hg19_v2_chr17_+_57233087_57233146	0.430383	NKX1-1	ENST00000578777.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000577457.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000582995.1|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr10_+_99205959_99205981	0.413697	NKX1-1	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr1_-_221915418_221915518	0.406441	NKX1-1	ENST00000323825.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10 	ENST00000366899.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10
hg19_v2_chr14_-_24711764_24711792	0.393438	NKX1-1	ENST00000557921.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558476.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr11_-_124981475_124981659	0.38388	NKX1-1	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr9_+_116225999_116226029	0.374941	NKX1-1	ENST00000317613.6|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr7_-_6048650_6048687	0.371056	NKX1-1	ENST00000382321.4|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae) 	ENST00000406569.3|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr11_-_47198380_47198448	0.370965	NKX1-1	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr1_+_155278539_155278559	0.366635	NKX1-1	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chrX_+_55026763_55026831	0.365895	NKX1-1	ENST00000374987.3|APEX2|ENSG00000169188.4|APEX nuclease (apurinic/apyrimidinic endonuclease) 2
hg19_v2_chr10_+_1095416_1095482	0.365324	NKX1-1	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr16_-_11036300_11036342	0.365098	NKX1-1	ENST00000331808.4|DEXI|ENSG00000182108.5|Dexi homolog (mouse)
hg19_v2_chr1_+_62439037_62439047	0.362518	NKX1-1	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr5_+_66300446_66300463	0.362178	NKX1-1	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr14_-_24711806_24711861	0.349348	NKX1-1	ENST00000540705.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000538777.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558566.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000559019.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr1_+_155278625_155278745	0.348849	NKX1-1	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr21_-_37914898_37914918	0.347358	NKX1-1	ENST00000399136.1|CLDN14|ENSG00000159261.6|claudin 14
hg19_v2_chr3_-_105587879_105587892	0.346985	NKX1-1	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr17_+_45286387_45286455	0.340393	NKX1-1	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr11_-_62521614_62521660	0.336267	NKX1-1	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr17_+_57232690_57232860	0.32997	NKX1-1	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr11_-_65625678_65625804	0.324164	NKX1-1	ENST00000308162.5|CFL1|ENSG00000172757.8|cofilin 1 (non-muscle)
hg19_v2_chr14_-_24711470_24711494	0.318267	NKX1-1	ENST00000559969.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr15_-_78526942_78527049	0.317974	NKX1-1	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr6_-_167040731_167040745	0.308337	NKX1-1	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr14_-_24711865_24711880	0.308276	NKX1-1	ENST00000399423.4|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000267415.7|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr18_+_55888767_55888809	0.299249	NKX1-1	ENST00000431212.2|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000586268.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000587190.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr17_+_45286706_45286766	0.29808	NKX1-1	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr5_-_115890554_115890592	0.291924	NKX1-1	ENST00000509665.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr10_-_1094819_1094890	0.283184	NKX1-1	ENST00000429642.1|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr12_+_28410128_28410133	0.278678	NKX1-1	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr4_-_54232144_54232267	0.278621	NKX1-1	ENST00000388940.4|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000503450.1|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000401642.3|SCFD2|ENSG00000184178.11|sec1 family domain containing 2
hg19_v2_chr17_-_8055747_8055758	0.276686	NKX1-1	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr17_-_45266542_45266683	0.265384	NKX1-1	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr2_+_105050794_105050854	0.260817	NKX1-1	ENST00000429464.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102 	ENST00000414442.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102 	ENST00000447380.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102
hg19_v2_chr15_+_96904487_96904487	0.259478	NKX1-1	ENST00000600790.1|AC087477.1|ENSG00000268484.1|Uncharacterized protein
hg19_v2_chr10_-_1095050_1095110	0.249567	NKX1-1	ENST00000381344.3|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr12_+_48499252_48499404	0.248876	NKX1-1	ENST00000549003.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000550924.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr19_+_50270219_50270391	0.246417	NKX1-1	ENST00000354293.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit 	ENST00000359032.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit
hg19_v2_chr7_+_99647411_99647433	0.24571	NKX1-1	ENST00000438937.1|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21
hg19_v2_chrX_-_153363125_153363182	0.245413	NKX1-1	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr7_-_6048702_6048756	0.24403	NKX1-1	ENST00000265849.7|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr18_+_63273310_63273326	0.233332	NKX1-1	ENST00000579862.1|RP11-775G23.1|ENSG00000265217.1|RP11-775G23.1
hg19_v2_chr11_-_62494821_62494953	0.228126	NKX1-1	ENST00000301785.5|HNRNPUL2|ENSG00000214753.2|heterogeneous nuclear ribonucleoprotein U-like 2
hg19_v2_chr17_-_57232596_57232630	0.226266	NKX1-1	ENST00000581068.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000330137.7|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr14_+_32798462_32798539	0.217923	NKX1-1	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr7_-_33102338_33102395	0.215391	NKX1-1	ENST00000610140.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr7_-_33102399_33102411	0.211186	NKX1-1	ENST00000242210.7|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr11_-_59383617_59383617	0.207478	NKX1-1	ENST00000263847.1|OSBP|ENSG00000110048.7|oxysterol binding protein
hg19_v2_chr12_-_102513843_102513908	0.20505	NKX1-1	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr17_-_10372875_10372876	0.200164	NKX1-1	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin, heavy chain 4, skeletal muscle
hg19_v2_chr7_+_6048856_6048967	0.197829	NKX1-1	ENST00000223029.3|AIMP2|ENSG00000106305.5|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 	ENST00000400479.2|AIMP2|ENSG00000106305.5|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 	ENST00000395236.2|AIMP2|ENSG00000106305.5|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
hg19_v2_chr12_+_2921788_2921872	0.191093	NKX1-1	ENST00000228799.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000419778.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000542548.1|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2
hg19_v2_chr3_-_105588231_105588396	0.188162	NKX1-1	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr11_-_111741994_111742058	0.187836	NKX1-1	ENST00000398006.2|ALG9|ENSG00000086848.10|ALG9, alpha-1,2-mannosyltransferase
hg19_v2_chr15_-_75199213_75199237	0.185394	NKX1-1	ENST00000562698.1|FAM219B|ENSG00000178761.10|family with sequence similarity 219, member B
hg19_v2_chr4_+_128554081_128554121	0.184647	NKX1-1	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr8_+_94929077_94929106	0.183903	NKX1-1	ENST00000297598.4|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000520614.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr8_+_26371763_26371791	0.183614	NKX1-1	ENST00000521913.1|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr19_-_6424783_6424805	0.182787	NKX1-1	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr3_+_186288454_186288535	0.178518	NKX1-1	ENST00000265028.3|DNAJB11|ENSG00000090520.6|DnaJ (Hsp40) homolog, subfamily B, member 11
hg19_v2_chr1_-_159915386_159915426	0.169016	NKX1-1	ENST00000361509.3|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9 	ENST00000368094.1|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9
hg19_v2_chr2_-_97405775_97405816	0.168078	NKX1-1	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr8_+_94929168_94929235	0.162083	NKX1-1	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr17_-_57232525_57232584	0.156888	NKX1-1	ENST00000583380.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000580541.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000578105.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000437036.2|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr11_+_119205222_119205247	0.153401	NKX1-1	ENST00000311413.4|RNF26|ENSG00000173456.4|ring finger protein 26
hg19_v2_chr15_-_64386120_64386217	0.151267	NKX1-1	ENST00000300030.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr4_-_103682145_103682157	0.146694	NKX1-1	ENST00000226578.4|MANBA|ENSG00000109323.4|mannosidase, beta A, lysosomal
hg19_v2_chr3_+_57261743_57261824	0.145783	NKX1-1	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr11_+_72983246_72983253	0.142968	NKX1-1	ENST00000393590.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr7_+_99647389_99647410	0.14198	NKX1-1	ENST00000543588.1|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000292450.4|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000456748.2|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21
hg19_v2_chr8_+_94929110_94929167	0.138894	NKX1-1	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr1_-_108507631_108507809	0.138509	NKX1-1	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr5_+_150226085_150226085	0.126749	NKX1-1	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr2_+_187371440_187371567	0.126679	NKX1-1	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr17_-_44657017_44657088	0.125579	NKX1-1	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr11_-_118023594_118023635	0.122532	NKX1-1	ENST00000529878.1|SCN4B|ENSG00000177098.4|sodium channel, voltage-gated, type IV, beta subunit
hg19_v2_chr12_+_6961279_6961343	0.119815	NKX1-1	ENST00000229268.8|USP5|ENSG00000111667.9|ubiquitin specific peptidase 5 (isopeptidase T) 	ENST00000389231.5|USP5|ENSG00000111667.9|ubiquitin specific peptidase 5 (isopeptidase T) 	ENST00000542087.1|USP5|ENSG00000111667.9|ubiquitin specific peptidase 5 (isopeptidase T)
hg19_v2_chr17_-_61777459_61777502	0.119108	NKX1-1	ENST00000578993.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000583211.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000259006.3|LIMD2|ENSG00000136490.4|LIM domain containing 2
hg19_v2_chr17_-_44439084_44439130	0.119074	NKX1-1	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chrX_-_47509994_47510008	0.113209	NKX1-1	ENST00000343894.4|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chr9_+_124329336_124329406	0.109794	NKX1-1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr2_-_167232484_167232503	0.108632	NKX1-1	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr1_-_231004220_231004399	0.107482	NKX1-1	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr3_+_23851928_23851951	0.106666	NKX1-1	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr11_-_71823796_71823826	0.103263	NKX1-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr8_+_98656693_98656774	0.102465	NKX1-1	ENST00000519934.1|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr15_-_64385981_64386077	0.0996593	NKX1-1	ENST00000557835.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000380290.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000559950.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr19_+_45504688_45504782	0.0982648	NKX1-1	ENST00000221452.8|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000540120.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000505236.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B
hg19_v2_chr1_+_222910625_222910649	0.0980528	NKX1-1	ENST00000360827.2|FAM177B|ENSG00000197520.6|family with sequence similarity 177, member B
hg19_v2_chr11_-_4629388_4629489	0.096296	NKX1-1	ENST00000526337.1|TRIM68|ENSG00000167333.8|tripartite motif containing 68 	ENST00000300747.5|TRIM68|ENSG00000167333.8|tripartite motif containing 68
hg19_v2_chr4_-_19458597_19458623	0.0947041	NKX1-1	ENST00000505347.1|RP11-3J1.1|ENSG00000248238.1|RP11-3J1.1
hg19_v2_chr17_-_8113886_8113916	0.0925299	NKX1-1	ENST00000577833.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000534871.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000583915.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000316199.6|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000581511.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000585124.1|AURKB|ENSG00000178999.8|aurora kinase B
hg19_v2_chr5_-_159546396_159546470	0.0924529	NKX1-1	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr11_-_4629367_4629384	0.0847752	NKX1-1	ENST00000533021.1|TRIM68|ENSG00000167333.8|tripartite motif containing 68
hg19_v2_chr11_-_71823715_71823792	0.0764604	NKX1-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr6_-_85473073_85473114	0.068216	NKX1-1	ENST00000606621.1|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr19_+_36249057_36249102	0.0588404	NKX1-1	ENST00000301165.5|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000536950.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000537459.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000421853.2|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55
hg19_v2_chr1_+_46972668_46972669	0.0563219	NKX1-1	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr13_+_36050881_36050887	0.0546335	NKX1-1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr7_-_27239703_27239725	0.0524164	NKX1-1	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr19_-_8070474_8070564	0.0495306	NKX1-1	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr16_-_66864806_66864900	0.0474761	NKX1-1	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr11_-_105892937_105893130	0.0456902	NKX1-1	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr10_-_56560939_56560950	0.0411006	NKX1-1	ENST00000373955.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr8_+_98656336_98656535	0.0352916	NKX1-1	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr9_+_139780942_139780977	0.0344965	NKX1-1	ENST00000247668.2|TRAF2|ENSG00000127191.13|TNF receptor-associated factor 2 	ENST00000359662.3|TRAF2|ENSG00000127191.13|TNF receptor-associated factor 2
hg19_v2_chrX_-_47509887_47509990	0.0319189	NKX1-1	ENST00000247161.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000592066.1|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000376983.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chrX_+_72783026_72783049	0.0312203	NKX1-1	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr7_-_99716914_99716936	0.0290821	NKX1-1	ENST00000431404.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr1_+_174843548_174843609	0.0213052	NKX1-1	ENST00000478442.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000465412.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr8_+_94929273_94929284	0.0154684	NKX1-1	ENST00000518573.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr17_-_40337470_40337470	0.00184271	NKX1-1	ENST00000293330.1|HCRT|ENSG00000161610.1|hypocretin (orexin) neuropeptide precursor
