hg19_v2_chr3_-_71834207_71834244	2.72775	NKX2-3	ENST00000295619.3|PROK2|ENSG00000163421.4|prokineticin 2
hg19_v2_chr3_+_108541545_108541569	2.69385	NKX2-3	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr6_-_32731243_32731295	2.2264	NKX2-3	ENST00000427449.1|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000411527.1|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr9_-_137809718_137809809	2.20821	NKX2-3	ENST00000371806.3|FCN1|ENSG00000085265.6|ficolin (collagen/fibrinogen domain containing) 1
hg19_v2_chr11_+_35211429_35211460	2.10443	NKX2-3	ENST00000525688.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000278385.6|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000533222.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr3_-_150966902_150966933	2.06459	NKX2-3	ENST00000424796.2|P2RY14|ENSG00000174944.4|purinergic receptor P2Y, G-protein coupled, 14
hg19_v2_chr14_+_22788560_22788620	1.98403	NKX2-3	ENST00000390468.1|TRAV41|ENSG00000211820.1|T cell receptor alpha variable 41
hg19_v2_chrX_+_71354000_71354000	1.90399	NKX2-3	ENST00000510661.1|NHSL2|ENSG00000204131.6|NHS-like 2 	ENST00000535692.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr14_+_21423611_21423665	1.86485	NKX2-3	ENST00000304625.2|RNASE2|ENSG00000169385.2|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
hg19_v2_chr12_+_10460549_10460585	1.79952	NKX2-3	ENST00000543420.1|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000543777.1|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chrX_+_71353499_71353499	1.75661	NKX2-3	ENST00000373677.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr7_-_76829125_76829143	1.65492	NKX2-3	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr19_-_44174330_44174502	1.65286	NKX2-3	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr12_-_123187890_123187911	1.65064	NKX2-3	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr13_-_45048386_45048415	1.64977	NKX2-3	ENST00000472477.1|TSC22D1|ENSG00000102804.10|TSC22 domain family, member 1
hg19_v2_chr12_+_9980113_9980133	1.64101	NKX2-3	ENST00000537723.1|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr20_-_4795747_4795769	1.64056	NKX2-3	ENST00000379376.2|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr12_-_123201337_123201439	1.6334	NKX2-3	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr10_+_129785574_129785608	1.62726	NKX2-3	ENST00000430713.2|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E 	ENST00000471218.1|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr4_-_90758227_90758379	1.57747	NKX2-3	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr4_-_90757364_90757396	1.54781	NKX2-3	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr3_+_108541608_108541624	1.53572	NKX2-3	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr12_+_10124110_10124196	1.52759	NKX2-3	ENST00000350667.4|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A
hg19_v2_chr1_+_40839369_40839449	1.52719	NKX2-3	ENST00000372718.3|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr12_+_10124001_10124034	1.50129	NKX2-3	ENST00000396507.3|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A 	ENST00000304361.4|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A 	ENST00000434319.2|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A
hg19_v2_chr1_-_162381907_162381939	1.5002	NKX2-3	ENST00000367929.2|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B 	ENST00000359567.3|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B
hg19_v2_chr16_-_89008211_89008252	1.47676	NKX2-3	ENST00000569464.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000569443.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chr10_-_5227096_5227144	1.47615	NKX2-3	ENST00000488756.1|AKR1CL1|ENSG00000196326.6|aldo-keto reductase family 1, member C-like 1 	ENST00000334314.3|AKR1CL1|ENSG00000196326.6|aldo-keto reductase family 1, member C-like 1
hg19_v2_chr14_+_21387491_21387506	1.44003	NKX2-3	ENST00000258817.2|RP11-84C10.2|ENSG00000136315.3|RP11-84C10.2
hg19_v2_chr6_-_112081113_112081154	1.39465	NKX2-3	ENST00000517419.1|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES
hg19_v2_chr19_-_14887568_14887660	1.33941	NKX2-3	ENST00000596991.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000594294.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000594076.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000595839.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392965.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000601345.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr14_+_22386325_22386391	1.33647	NKX2-3	ENST00000390439.2|TRAV13-2|ENSG00000211791.2|T cell receptor alpha variable 13-2
hg19_v2_chr4_-_84035868_84035897	1.33402	NKX2-3	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr6_-_32160622_32160719	1.32292	NKX2-3	ENST00000487761.1|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3 	ENST00000375040.3|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3
hg19_v2_chr5_+_17404114_17404134	1.32044	NKX2-3	ENST00000508677.1|RP11-321E2.3|ENSG00000248455.1|RP11-321E2.3
hg19_v2_chr4_-_90758118_90758150	1.30209	NKX2-3	ENST00000420646.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr19_+_3178736_3178779	1.29715	NKX2-3	ENST00000246115.3|S1PR4|ENSG00000125910.4|sphingosine-1-phosphate receptor 4
hg19_v2_chr10_+_129785536_129785551	1.29396	NKX2-3	ENST00000419012.2|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr19_-_15575369_15575386	1.26867	NKX2-3	ENST00000343625.7|RASAL3|ENSG00000105122.8|RAS protein activator like 3
hg19_v2_chr6_-_32731299_32731316	1.25152	NKX2-3	ENST00000435145.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000437316.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr18_-_74839891_74839921	1.24727	NKX2-3	ENST00000581878.1|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr5_-_169739679_169739733	1.22702	NKX2-3	ENST00000511921.1|CTB-114C7.4|ENSG00000250274.1|CTB-114C7.4
hg19_v2_chr4_-_84035905_84035955	1.18467	NKX2-3	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chrX_+_153029633_153029738	1.17834	NKX2-3	ENST00000538966.1|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000361971.5|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000538776.1|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000538543.1|PLXNB3|ENSG00000198753.7|plexin B3
hg19_v2_chr7_+_142326335_142326363	1.17294	NKX2-3	ENST00000390393.3|TRBV19|ENSG00000211746.3|T cell receptor beta variable 19
hg19_v2_chrX_+_9502971_9502984	1.1705	NKX2-3	ENST00000452824.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr5_-_142814241_142814278	1.16048	NKX2-3	ENST00000504572.1|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr18_-_5521372_5521422	1.15067	NKX2-3	ENST00000580989.1|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chrX_-_108976410_108976445	1.1413	NKX2-3	ENST00000504980.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr2_+_219110149_219110226	1.1132	NKX2-3	ENST00000456575.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr10_-_36813162_36813162	1.11147	NKX2-3	ENST00000440465.1|NAMPTL|ENSG00000229644.4|nicotinamide phosphoribosyltransferase-like
hg19_v2_chr7_-_37393263_37393284	1.09155	NKX2-3	ENST00000442504.1|ELMO1|ENSG00000155849.11|engulfment and cell motility 1
hg19_v2_chr14_+_22993296_22993296	1.08861	NKX2-3	ENST00000390517.1|TRAJ20|ENSG00000211869.1|T cell receptor alpha joining 20
hg19_v2_chr12_-_45315625_45315636	1.08788	NKX2-3	ENST00000552993.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr6_+_46761118_46761132	1.08061	NKX2-3	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr17_-_29641084_29641103	1.0801	NKX2-3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr3_+_186743261_186743277	1.07135	NKX2-3	ENST00000423451.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 	ENST00000446170.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr19_+_14491948_14492014	1.065	NKX2-3	ENST00000358600.3|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr7_-_29186008_29186172	1.06432	NKX2-3	ENST00000396276.3|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like 	ENST00000265394.5|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like
hg19_v2_chr17_-_29641104_29641130	1.05687	NKX2-3	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr12_-_14849470_14849540	1.05609	NKX2-3	ENST00000261170.3|GUCY2C|ENSG00000070019.3|guanylate cyclase 2C (heat stable enterotoxin receptor)
hg19_v2_chr12_+_104982622_104982628	1.04754	NKX2-3	ENST00000549016.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr14_+_22580233_22580313	1.0438	NKX2-3	ENST00000390454.2|TRAV25|ENSG00000211806.2|T cell receptor alpha variable 25
hg19_v2_chr3_+_38179969_38180192	1.04267	NKX2-3	ENST00000396334.3|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000417037.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000424893.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000495303.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000443433.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000421516.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88
hg19_v2_chr20_+_48884002_48884088	1.04181	NKX2-3	ENST00000425497.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3	ENST00000445003.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3
hg19_v2_chr15_+_57891609_57891704	1.02846	NKX2-3	ENST00000569089.1|MYZAP|ENSG00000263155.1|myocardial zonula adherens protein
hg19_v2_chr22_-_50523807_50523826	1.01021	NKX2-3	ENST00000442311.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1 	ENST00000538737.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr11_+_10326612_10326635	0.995587	NKX2-3	ENST00000534464.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000530439.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000524948.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000528655.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000526492.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000525063.1|ADM|ENSG00000148926.5|adrenomedullin
hg19_v2_chr19_+_14492247_14492264	0.991395	NKX2-3	ENST00000357355.3|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000592261.2|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000242786.5|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr12_+_10460417_10460485	0.99056	NKX2-3	ENST00000381908.3|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000336164.4|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000350274.5|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr14_+_21387508_21387523	0.990456	NKX2-3	ENST00000555624.1|RP11-84C10.2|ENSG00000136315.3|RP11-84C10.2
hg19_v2_chr1_+_207070775_207070797	0.988348	NKX2-3	ENST00000391929.3|IL24|ENSG00000162892.11|interleukin 24 	ENST00000294984.2|IL24|ENSG00000162892.11|interleukin 24 	ENST00000367093.3|IL24|ENSG00000162892.11|interleukin 24
hg19_v2_chr17_+_58227287_58227313	0.987825	NKX2-3	ENST00000300900.4|CA4|ENSG00000167434.5|carbonic anhydrase IV 	ENST00000591725.1|CA4|ENSG00000167434.5|carbonic anhydrase IV
hg19_v2_chr19_+_14492217_14492241	0.984032	NKX2-3	ENST00000587606.1|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000586517.1|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000591080.1|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr14_+_64565442_64565481	0.972427	NKX2-3	ENST00000553308.1|SYNE2|ENSG00000054654.11|spectrin repeat containing, nuclear envelope 2
hg19_v2_chr18_-_70532906_70532934	0.965489	NKX2-3	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr19_-_45579762_45579846	0.963976	NKX2-3	ENST00000303809.2|ZNF296|ENSG00000170684.4|zinc finger protein 296
hg19_v2_chr3_-_36986534_36986619	0.962889	NKX2-3	ENST00000429976.2|TRANK1|ENSG00000168016.9|tetratricopeptide repeat and ankyrin repeat containing 1 	ENST00000301807.6|TRANK1|ENSG00000168016.9|tetratricopeptide repeat and ankyrin repeat containing 1
hg19_v2_chr14_-_91720224_91720378	0.939685	NKX2-3	ENST00000238699.3|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000531499.2|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr3_-_131753830_131753844	0.929685	NKX2-3	ENST00000429747.1|CPNE4|ENSG00000196353.7|copine IV
hg19_v2_chr19_-_29026154_29026184	0.926905	NKX2-3	ENST00000593065.1|AC005307.3|ENSG00000267243.1|AC005307.3
hg19_v2_chr3_-_150920979_150921009	0.906671	NKX2-3	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr1_+_174669653_174669663	0.902785	NKX2-3	ENST00000325589.5|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr8_+_32579271_32579316	0.900505	NKX2-3	ENST00000518084.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr2_-_70944855_70944910	0.895313	NKX2-3	ENST00000415348.1|ADD2|ENSG00000075340.18|adducin 2 (beta)
hg19_v2_chr4_-_48082192_48082207	0.893498	NKX2-3	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr19_+_7445850_7445850	0.886653	NKX2-3	ENST00000593531.1|CTD-2207O23.3|ENSG00000268861.1|Rho guanine nucleotide exchange factor 18
hg19_v2_chr4_-_36246060_36246167	0.882692	NKX2-3	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr1_+_174670143_174670160	0.873713	NKX2-3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chrX_+_103029314_103029342	0.865897	NKX2-3	ENST00000429977.1|PLP1|ENSG00000123560.9|proteolipid protein 1
hg19_v2_chr10_+_106937525_106937525	0.860601	NKX2-3	ENST00000369699.4|SORCS3|ENSG00000156395.8|sortilin-related VPS10 domain containing receptor 3
hg19_v2_chr18_-_67623906_67624041	0.857989	NKX2-3	ENST00000583955.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr2_-_158184211_158184231	0.853199	NKX2-3	ENST00000397283.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr3_+_63428982_63429027	0.852081	NKX2-3	ENST00000479198.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000460711.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000465156.1|SYNPR|ENSG00000163630.6|synaptoporin
hg19_v2_chr4_-_85654615_85654615	0.847204	NKX2-3	ENST00000514711.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr1_+_158901329_158901366	0.840753	NKX2-3	ENST00000368140.1|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000368138.3|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000392254.2|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000392252.3|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000368135.4|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1
hg19_v2_chrX_-_108976449_108976501	0.832668	NKX2-3	ENST00000469857.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr15_+_43477580_43477656	0.830988	NKX2-3	ENST00000356633.5|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr4_+_102734967_102735022	0.825276	NKX2-3	ENST00000444316.2|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr19_+_36142147_36142211	0.821335	NKX2-3	ENST00000590618.1|COX6B1|ENSG00000126267.4|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v2_chr18_+_22040620_22040693	0.812893	NKX2-3	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr21_+_30672433_30672464	0.811888	NKX2-3	ENST00000451655.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr2_-_38303218_38303323	0.797311	NKX2-3	ENST00000407341.1|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1 	ENST00000260630.3|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1
hg19_v2_chr6_-_137539651_137539703	0.79485	NKX2-3	ENST00000543628.1|IFNGR1|ENSG00000027697.8|interferon gamma receptor 1
hg19_v2_chr18_-_67624160_67624238	0.793139	NKX2-3	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr12_-_108714412_108714446	0.782908	NKX2-3	ENST00000412676.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1 	ENST00000550573.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1
hg19_v2_chrX_+_41548220_41548243	0.782034	NKX2-3	ENST00000378142.4|GPR34|ENSG00000171659.9|G protein-coupled receptor 34
hg19_v2_chr10_+_1120312_1120338	0.780233	NKX2-3	ENST00000436154.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr13_+_32313658_32313679	0.77773	NKX2-3	ENST00000380314.1|RXFP2|ENSG00000133105.3|relaxin/insulin-like family peptide receptor 2 	ENST00000298386.2|RXFP2|ENSG00000133105.3|relaxin/insulin-like family peptide receptor 2
hg19_v2_chr2_+_89923550_89923550	0.766956	NKX2-3	ENST00000509129.1|IGKV1D-37|ENSG00000250036.1|immunoglobulin kappa variable 1D-37 (non-functional)
hg19_v2_chr4_+_81118647_81118666	0.757687	NKX2-3	ENST00000415738.2|PRDM8|ENSG00000152784.11|PR domain containing 8
hg19_v2_chr14_+_39703084_39703110	0.751068	NKX2-3	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr1_-_31538517_31538632	0.731089	NKX2-3	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chrX_+_41548259_41548320	0.727455	NKX2-3	ENST00000378138.5|GPR34|ENSG00000171659.9|G protein-coupled receptor 34
hg19_v2_chr14_+_22928070_22928090	0.724375	NKX2-3	ENST00000390476.1|TRDJ3|ENSG00000211828.1|T cell receptor delta joining 3
hg19_v2_chr19_+_41882466_41882483	0.719789	NKX2-3	ENST00000436170.2|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr2_+_191002486_191002512	0.718621	NKX2-3	ENST00000396974.2|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr7_+_7196565_7196714	0.717743	NKX2-3	ENST00000429911.1|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr12_-_123565834_123565880	0.707687	NKX2-3	ENST00000546049.1|PITPNM2|ENSG00000090975.8|phosphatidylinositol transfer protein, membrane-associated 2
hg19_v2_chr3_+_30647994_30648010	0.700452	NKX2-3	ENST00000295754.5|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr1_-_156460391_156460417	0.70028	NKX2-3	ENST00000360595.3|MEF2D|ENSG00000116604.13|myocyte enhancer factor 2D
hg19_v2_chr15_+_43477455_43477482	0.686557	NKX2-3	ENST00000300213.4|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr2_+_114163945_114163973	0.680801	NKX2-3	ENST00000453673.3|IGKV1OR2-108|ENSG00000231292.5|immunoglobulin kappa variable 1/OR2-108 (non-functional)
hg19_v2_chrX_-_108868390_108868407	0.676989	NKX2-3	ENST00000372101.2|KCNE1L|ENSG00000176076.6|KCNE1-like
hg19_v2_chr1_-_232598163_232598163	0.675531	NKX2-3	ENST00000308942.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr22_+_44427230_44427253	0.675374	NKX2-3	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chr11_-_75017734_75017755	0.67536	NKX2-3	ENST00000532525.1|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr4_-_5990166_5990166	0.672593	NKX2-3	ENST00000324058.5|C4orf50|ENSG00000181215.8|chromosome 4 open reading frame 50
hg19_v2_chr2_+_191045173_191045266	0.666792	NKX2-3	ENST00000409870.1|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr19_-_19051993_19052073	0.666598	NKX2-3	ENST00000594794.1|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila) 	ENST00000355887.6|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila) 	ENST00000392351.3|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila) 	ENST00000596482.1|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila)
hg19_v2_chr7_+_29186174_29186188	0.666401	NKX2-3	ENST00000439384.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr1_-_198990166_198990193	0.652778	NKX2-3	ENST00000427439.1|RP11-16L9.3|ENSG00000233410.1|RP11-16L9.3
hg19_v2_chr18_-_64271316_64271334	0.636191	NKX2-3	ENST00000540086.1|CDH19|ENSG00000071991.4|cadherin 19, type 2 	ENST00000580157.1|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr5_-_39270725_39270771	0.633087	NKX2-3	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr10_-_104262460_104262489	0.631836	NKX2-3	ENST00000446605.2|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000369905.4|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000545684.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr5_+_156693091_156693150	0.628151	NKX2-3	ENST00000318218.6|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000442283.2|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000522463.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000521420.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr13_-_99910620_99910660	0.625081	NKX2-3	ENST00000416594.1|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr18_-_60986613_60986662	0.620305	NKX2-3	ENST00000444484.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr3_-_160167301_160167401	0.620057	NKX2-3	ENST00000494486.1|TRIM59|ENSG00000213186.3|tripartite motif containing 59
hg19_v2_chr1_-_155880672_155880715	0.617152	NKX2-3	ENST00000609492.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368322.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chr5_-_134783038_134783038	0.616903	NKX2-3	ENST00000503143.2|C5orf20|ENSG00000251380.2|chromosome 5 open reading frame 20
hg19_v2_chrX_+_103028638_103028650	0.611072	NKX2-3	ENST00000434483.1|PLP1|ENSG00000123560.9|proteolipid protein 1
hg19_v2_chr13_-_99910673_99910682	0.607913	NKX2-3	ENST00000397473.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18 	ENST00000397470.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr10_+_16478942_16478983	0.605967	NKX2-3	ENST00000535784.2|PTER|ENSG00000165983.10|phosphotriesterase related 	ENST00000423462.2|PTER|ENSG00000165983.10|phosphotriesterase related 	ENST00000378000.1|PTER|ENSG00000165983.10|phosphotriesterase related
hg19_v2_chr11_+_64950801_64950829	0.605797	NKX2-3	ENST00000526468.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr4_+_95376396_95376421	0.605077	NKX2-3	ENST00000508216.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000514743.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5
hg19_v2_chr3_+_30648066_30648167	0.600852	NKX2-3	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr1_+_202317855_202317864	0.600324	NKX2-3	ENST00000356764.2|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr1_-_19746236_19746261	0.599871	NKX2-3	ENST00000375144.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr8_-_116673894_116673913	0.597878	NKX2-3	ENST00000395713.2|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr12_+_111537227_111537250	0.586362	NKX2-3	ENST00000397643.3|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr17_+_66521936_66522026	0.585642	NKX2-3	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr14_-_95624227_95624347	0.583253	NKX2-3	ENST00000526495.1|DICER1|ENSG00000100697.10|dicer 1, ribonuclease type III
hg19_v2_chrX_-_49121165_49121288	0.577714	NKX2-3	ENST00000376207.4|FOXP3|ENSG00000049768.10|forkhead box P3 	ENST00000376199.2|FOXP3|ENSG00000049768.10|forkhead box P3
hg19_v2_chr22_-_21213676_21213705	0.573651	NKX2-3	ENST00000449120.1|PI4KA|ENSG00000241973.6|phosphatidylinositol 4-kinase, catalytic, alpha
hg19_v2_chr6_-_26216872_26216895	0.571368	NKX2-3	ENST00000244601.3|HIST1H2BG|ENSG00000187990.4|histone cluster 1, H2bg
hg19_v2_chrX_-_134049233_134049258	0.560236	NKX2-3	ENST00000370779.4|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr8_-_101719159_101719226	0.55763	NKX2-3	ENST00000520868.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522658.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr8_-_101718991_101719023	0.554615	NKX2-3	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr11_-_62342375_62342471	0.5449	NKX2-3	ENST00000378019.3|EEF1G|ENSG00000254772.5|eukaryotic translation elongation factor 1 gamma
hg19_v2_chr6_-_111927062_111927125	0.54177	NKX2-3	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr20_+_57427765_57427783	0.54064	NKX2-3	ENST00000371100.4|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr16_+_56969284_56969314	0.538165	NKX2-3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr22_+_39101728_39101763	0.535279	NKX2-3	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chrX_-_14891150_14891201	0.533775	NKX2-3	ENST00000452869.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000398334.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000324138.3|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B
hg19_v2_chr5_+_162930114_162930125	0.532291	NKX2-3	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr8_-_135652051_135652123	0.52798	NKX2-3	ENST00000522257.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing
hg19_v2_chr15_-_101142362_101142395	0.526481	NKX2-3	ENST00000559577.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000561308.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560133.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560941.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000559736.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560272.1|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr5_-_70320941_70320941	0.519228	NKX2-3	ENST00000523981.1|NAIP|ENSG00000249437.3|NLR family, apoptosis inhibitory protein
hg19_v2_chr18_-_60985914_60986045	0.518135	NKX2-3	ENST00000589955.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr16_-_31076332_31076409	0.51813	NKX2-3	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr20_-_43729750_43729774	0.513314	NKX2-3	ENST00000537075.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 	ENST00000306117.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v2_chr17_+_45286387_45286455	0.51313	NKX2-3	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr8_+_103540983_103541059	0.511973	NKX2-3	ENST00000523572.1|KB-1980E6.3|ENSG00000253633.1|Uncharacterized protein
hg19_v2_chr4_+_144303093_144303132	0.510341	NKX2-3	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr11_-_65363259_65363279	0.508623	NKX2-3	ENST00000342202.4|KCNK7|ENSG00000173338.8|potassium channel, subfamily K, member 7
hg19_v2_chr11_-_71753188_71753200	0.493227	NKX2-3	ENST00000543009.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr10_-_104262426_104262437	0.493185	NKX2-3	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr1_-_206306107_206306143	0.489762	NKX2-3	ENST00000436158.1|RP11-38J22.6|ENSG00000240754.1|RP11-38J22.6	ENST00000455672.1|RP11-38J22.6|ENSG00000240754.1|RP11-38J22.6
hg19_v2_chr7_+_56032652_56032669	0.488318	NKX2-3	ENST00000437587.1|GBAS|ENSG00000146729.5|glioblastoma amplified sequence
hg19_v2_chr15_+_91411810_91411828	0.485981	NKX2-3	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr1_+_43803475_43803520	0.485604	NKX2-3	ENST00000372470.3|MPL|ENSG00000117400.10|myeloproliferative leukemia virus oncogene 	ENST00000413998.2|MPL|ENSG00000117400.10|myeloproliferative leukemia virus oncogene
hg19_v2_chr1_+_32666188_32666274	0.482226	NKX2-3	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chr19_+_33865218_33865254	0.478491	NKX2-3	ENST00000585933.2|CEBPG|ENSG00000153879.4|CCAAT/enhancer binding protein (C/EBP), gamma
hg19_v2_chr14_-_60636561_60636597	0.478104	NKX2-3	ENST00000536410.2|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7 	ENST00000216500.5|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr3_+_23851928_23851951	0.476047	NKX2-3	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr4_-_57524061_57524074	0.475487	NKX2-3	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr7_+_29186192_29186222	0.474142	NKX2-3	ENST00000539406.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr5_+_49961727_49961740	0.473816	NKX2-3	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr5_+_149569520_149569689	0.473687	NKX2-3	ENST00000230671.2|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7 	ENST00000524041.1|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7
hg19_v2_chr8_+_28196157_28196204	0.471859	NKX2-3	ENST00000522209.1|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr5_-_59481406_59481425	0.471736	NKX2-3	ENST00000546160.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr14_+_22948510_22948510	0.469879	NKX2-3	ENST00000390483.1|TRAJ56|ENSG00000211835.1|T cell receptor alpha joining 56
hg19_v2_chr15_+_67841330_67841348	0.46769	NKX2-3	ENST00000354498.5|MAP2K5|ENSG00000137764.15|mitogen-activated protein kinase kinase 5
hg19_v2_chr2_-_89597542_89597542	0.46093	NKX2-3	ENST00000465170.1|IGKV1-37|ENSG00000239862.1|immunoglobulin kappa variable 1-37 (non-functional)
hg19_v2_chr14_-_72458326_72458326	0.458992	NKX2-3	ENST00000542853.1|AC005477.1|ENSG00000257040.1|AC005477.1
hg19_v2_chr16_+_2255841_2255891	0.453671	NKX2-3	ENST00000301725.7|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr5_-_114631958_114631990	0.453594	NKX2-3	ENST00000395557.4|CCDC112|ENSG00000164221.8|coiled-coil domain containing 112
hg19_v2_chr3_+_35721182_35721277	0.452436	NKX2-3	ENST00000413378.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa 	ENST00000417925.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr12_-_125398654_125398687	0.450611	NKX2-3	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr13_-_46756351_46756459	0.449093	NKX2-3	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr5_-_159846066_159846095	0.448916	NKX2-3	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr12_-_104531945_104531996	0.448851	NKX2-3	ENST00000551446.1|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr5_+_112312399_112312414	0.444126	NKX2-3	ENST00000515408.1|DCP2|ENSG00000172795.11|decapping mRNA 2 	ENST00000513585.1|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr6_+_134273321_134273424	0.444067	NKX2-3	ENST00000457715.1|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr11_+_35211511_35211557	0.438541	NKX2-3	ENST00000524922.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr1_-_35325318_35325397	0.437206	NKX2-3	ENST00000423898.1|SMIM12|ENSG00000163866.8|small integral membrane protein 12 	ENST00000456842.1|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr3_+_98482175_98482197	0.434223	NKX2-3	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chrX_+_78003204_78003248	0.43108	NKX2-3	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr12_+_14572070_14572164	0.429767	NKX2-3	ENST00000545769.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000428217.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000396279.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000542514.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536279.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr17_+_29248698_29248747	0.429198	NKX2-3	ENST00000330889.3|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr2_-_37501692_37501747	0.429059	NKX2-3	ENST00000443977.1|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr9_+_131447342_131447362	0.426191	NKX2-3	ENST00000409104.3|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr17_+_75401152_75401172	0.425329	NKX2-3	ENST00000585930.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chrX_-_152160740_152160774	0.423916	NKX2-3	ENST00000361887.5|PNMA5|ENSG00000198883.7|paraneoplastic Ma antigen family member 5 	ENST00000439251.1|PNMA5|ENSG00000198883.7|paraneoplastic Ma antigen family member 5 	ENST00000452693.1|PNMA5|ENSG00000198883.7|paraneoplastic Ma antigen family member 5
hg19_v2_chr2_+_120687335_120687357	0.423755	NKX2-3	ENST00000544261.1|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr11_+_94277017_94277097	0.42273	NKX2-3	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr19_-_39368887_39368935	0.421057	NKX2-3	ENST00000340740.3|RINL|ENSG00000187994.9|Ras and Rab interactor-like 	ENST00000591812.1|RINL|ENSG00000187994.9|Ras and Rab interactor-like
hg19_v2_chr11_-_71752838_71752915	0.421043	NKX2-3	ENST00000537930.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr11_+_28131821_28131869	0.419762	NKX2-3	ENST00000379199.2|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000303459.6|METTL15|ENSG00000169519.15|methyltransferase like 15
hg19_v2_chr9_-_39239171_39239171	0.414768	NKX2-3	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr3_+_154801678_154801733	0.407878	NKX2-3	ENST00000462837.1|MME|ENSG00000196549.6|membrane metallo-endopeptidase
hg19_v2_chr5_-_58335281_58335339	0.407405	NKX2-3	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr18_-_43684186_43684199	0.402234	NKX2-3	ENST00000590406.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000282050.2|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000590324.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
hg19_v2_chr6_-_32634425_32634479	0.40186	NKX2-3	ENST00000399082.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000399079.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000374943.4|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000434651.2|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1
hg19_v2_chr14_+_67831576_67831615	0.401573	NKX2-3	ENST00000555876.1|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr22_+_45714301_45714339	0.400004	NKX2-3	ENST00000427777.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr6_-_116833500_116833511	0.398071	NKX2-3	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr8_-_57472137_57472150	0.397371	NKX2-3	ENST00000519144.1|LINC00968|ENSG00000246430.2|long intergenic non-protein coding RNA 968
hg19_v2_chrX_-_55057403_55057497	0.394914	NKX2-3	ENST00000396198.3|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000335854.4|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000455688.1|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000330807.5|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2
hg19_v2_chr9_-_86593238_86593367	0.394502	NKX2-3	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr1_+_109632425_109632425	0.392657	NKX2-3	ENST00000338272.8|TMEM167B|ENSG00000215717.5|transmembrane protein 167B
hg19_v2_chr5_+_147774275_147774340	0.389622	NKX2-3	ENST00000513826.1|FBXO38|ENSG00000145868.12|F-box protein 38
hg19_v2_chr2_+_64073187_64073217	0.389245	NKX2-3	ENST00000491621.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr6_+_73076432_73076455	0.384159	NKX2-3	ENST00000414192.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr7_-_38948774_38948829	0.382795	NKX2-3	ENST00000395969.2|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000414632.1|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000310301.4|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae)
hg19_v2_chr5_+_17404147_17404255	0.381664	NKX2-3	ENST00000507730.1|RP11-321E2.3|ENSG00000248455.1|RP11-321E2.3
hg19_v2_chr21_+_33671264_33671283	0.381239	NKX2-3	ENST00000339944.4|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr16_-_1538765_1538982	0.371774	NKX2-3	ENST00000447419.2|PTX4|ENSG00000251692.3|pentraxin 4, long 	ENST00000440447.2|PTX4|ENSG00000251692.3|pentraxin 4, long
hg19_v2_chr12_-_125398850_125399198	0.370669	NKX2-3	ENST00000535859.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546271.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540700.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546120.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr18_+_32173276_32173349	0.36714	NKX2-3	ENST00000591816.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588125.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000598334.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588684.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000554864.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399121.5|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000595022.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000269190.7|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399097.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr14_+_22959438_22959479	0.36707	NKX2-3	ENST00000390489.1|TRAJ48|ENSG00000211841.1|T cell receptor alpha joining 48
hg19_v2_chr22_+_45714361_45714374	0.364451	NKX2-3	ENST00000452238.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr19_-_12946215_12946230	0.361692	NKX2-3	ENST00000591512.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000587549.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000322912.5|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr12_-_110434096_110434139	0.358392	NKX2-3	ENST00000320063.9|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000457474.2|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000547815.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000361006.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr8_-_20040638_20040717	0.35542	NKX2-3	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chrX_-_40036520_40036582	0.352208	NKX2-3	ENST00000406200.2|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378455.4|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000342274.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr16_-_31076273_31076290	0.349622	NKX2-3	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr11_-_57177586_57177586	0.348567	NKX2-3	ENST00000529411.1|RP11-872D17.8|ENSG00000254979.1|Uncharacterized protein
hg19_v2_chr11_+_33563618_33563618	0.348286	NKX2-3	ENST00000526400.1|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr1_-_35325400_35325431	0.348149	NKX2-3	ENST00000521580.2|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr1_+_152748848_152748921	0.344983	NKX2-3	ENST00000334371.2|LCE1F|ENSG00000240386.2|late cornified envelope 1F
hg19_v2_chr16_-_69166031_69166070	0.342881	NKX2-3	ENST00000398235.2|CHTF8|ENSG00000168802.8|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) 	ENST00000520529.1|CHTF8|ENSG00000168802.8|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg19_v2_chr15_-_101142401_101142445	0.341097	NKX2-3	ENST00000314742.8|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr3_-_69402828_69402852	0.340759	NKX2-3	ENST00000460709.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr2_+_172309634_172309643	0.340563	NKX2-3	ENST00000339506.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr18_+_43684310_43684373	0.34051	NKX2-3	ENST00000592471.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1 	ENST00000585518.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr2_-_180129484_180129574	0.339789	NKX2-3	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr16_-_18911366_18911366	0.339194	NKX2-3	ENST00000565224.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr5_-_54988448_54988545	0.337218	NKX2-3	ENST00000503817.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9 	ENST00000512595.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9
hg19_v2_chr13_-_30881134_30881181	0.335589	NKX2-3	ENST00000380617.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1 	ENST00000441394.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr10_+_3146868_3146939	0.334734	NKX2-3	ENST00000415005.1|PFKP|ENSG00000067057.12|phosphofructokinase, platelet 	ENST00000468050.1|PFKP|ENSG00000067057.12|phosphofructokinase, platelet
hg19_v2_chr2_+_202125219_202125230	0.331684	NKX2-3	ENST00000323492.7|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase
hg19_v2_chr19_+_56187987_56188005	0.32906	NKX2-3	ENST00000411543.2|EPN1|ENSG00000063245.10|epsin 1
hg19_v2_chr20_+_57464200_57464215	0.328119	NKX2-3	ENST00000604005.1|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr13_+_42712178_42712197	0.327214	NKX2-3	ENST00000536612.1|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr13_+_111766897_111766966	0.32716	NKX2-3	ENST00000317133.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr19_+_41882598_41882689	0.326713	NKX2-3	ENST00000447302.2|TMEM91|ENSG00000142046.10|transmembrane protein 91 	ENST00000544232.1|TMEM91|ENSG00000142046.10|transmembrane protein 91 	ENST00000540732.1|CTC-435M10.3|ENSG00000255730.2|2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; Uncharacterized protein  	ENST00000542945.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr17_+_41132564_41132600	0.326608	NKX2-3	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr5_-_148033693_148033716	0.325502	NKX2-3	ENST00000377888.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000360693.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr1_+_152730499_152730507	0.324061	NKX2-3	ENST00000368773.1|KPRP|ENSG00000203786.5|keratinocyte proline-rich protein
hg19_v2_chr1_-_26633480_26633502	0.323426	NKX2-3	ENST00000450041.1|UBXN11|ENSG00000158062.16|UBX domain protein 11
hg19_v2_chr12_-_121790237_121790265	0.32322	NKX2-3	ENST00000261819.3|ANAPC5|ENSG00000089053.8|anaphase promoting complex subunit 5
hg19_v2_chr7_-_86849836_86849866	0.320963	NKX2-3	ENST00000455575.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr4_-_39034542_39034578	0.320749	NKX2-3	ENST00000344606.6|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr5_-_180688105_180688162	0.316669	NKX2-3	ENST00000327767.4|TRIM52|ENSG00000183718.4|tripartite motif containing 52
hg19_v2_chr5_-_148033726_148033741	0.313809	NKX2-3	ENST00000354217.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000314512.6|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000362016.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr18_-_64271363_64271390	0.311862	NKX2-3	ENST00000262150.2|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr19_+_15751689_15751715	0.3107	NKX2-3	ENST00000586182.2|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3 	ENST00000591058.1|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3 	ENST00000221307.8|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3
hg19_v2_chr11_-_10822029_10822128	0.310641	NKX2-3	ENST00000528839.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr18_-_43684230_43684300	0.309752	NKX2-3	ENST00000592989.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000589869.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
hg19_v2_chr12_+_111051832_111051873	0.308844	NKX2-3	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr1_-_175712829_175712906	0.308426	NKX2-3	ENST00000367674.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr1_+_15943995_15944014	0.307723	NKX2-3	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr3_+_113775594_113775666	0.30731	NKX2-3	ENST00000479882.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000493014.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr10_-_104913367_104913393	0.305633	NKX2-3	ENST00000423468.2|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr16_+_75690093_75690122	0.304414	NKX2-3	ENST00000564671.2|TERF2IP|ENSG00000166848.5|telomeric repeat binding factor 2, interacting protein
hg19_v2_chr12_+_42719947_42719983	0.304117	NKX2-3	ENST00000395580.3|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000337898.6|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000358314.7|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000395568.2|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000256678.8|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000449194.2|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000552761.1|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000317560.9|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000432191.2|PPHLN1|ENSG00000134283.13|periphilin 1
hg19_v2_chr5_+_75904918_75904947	0.301015	NKX2-3	ENST00000514001.1|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2 	ENST00000396234.3|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2 	ENST00000509074.1|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr3_-_3221358_3221394	0.298451	NKX2-3	ENST00000424814.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000450014.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000231948.4|CRBN|ENSG00000113851.9|cereblon 	ENST00000432408.2|CRBN|ENSG00000113851.9|cereblon
hg19_v2_chr1_+_113217073_113217127	0.298226	NKX2-3	ENST00000369645.1|MOV10|ENSG00000155363.14|Mov10, Moloney leukemia virus 10, homolog (mouse)
hg19_v2_chr6_-_11382478_11382592	0.292517	NKX2-3	ENST00000397378.3|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000513989.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000508546.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000504387.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr4_-_39033963_39034047	0.292452	NKX2-3	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr1_-_29508321_29508444	0.291541	NKX2-3	ENST00000546138.1|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr14_+_102276192_102276208	0.290473	NKX2-3	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr1_-_29508499_29508524	0.287627	NKX2-3	ENST00000373795.4|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr3_+_182971018_182971059	0.287618	NKX2-3	ENST00000326505.3|B3GNT5|ENSG00000176597.7|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v2_chr3_-_69062790_69062855	0.28638	NKX2-3	ENST00000540955.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 	ENST00000456376.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr3_+_124223586_124223628	0.286274	NKX2-3	ENST00000393496.1|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chr15_+_40674963_40675037	0.284519	NKX2-3	ENST00000448395.2|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein
hg19_v2_chr14_-_23762777_23762821	0.284464	NKX2-3	ENST00000431326.2|HOMEZ|ENSG00000215271.6|homeobox and leucine zipper encoding
hg19_v2_chrX_-_21776281_21776299	0.283057	NKX2-3	ENST00000379494.3|SMPX|ENSG00000091482.5|small muscle protein, X-linked
hg19_v2_chr1_+_113217043_113217070	0.281162	NKX2-3	ENST00000413052.2|MOV10|ENSG00000155363.14|Mov10, Moloney leukemia virus 10, homolog (mouse)
hg19_v2_chr17_+_7591639_7591672	0.280757	NKX2-3	ENST00000396463.2|WRAP53|ENSG00000141499.12|WD repeat containing, antisense to TP53
hg19_v2_chr6_+_134273300_134273320	0.28005	NKX2-3	ENST00000416965.1|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr14_-_94547541_94547591	0.280011	NKX2-3	ENST00000544005.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000555054.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000330836.5|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24
hg19_v2_chr7_-_86849883_86849910	0.276361	NKX2-3	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr2_-_36825281_36825342	0.275979	NKX2-3	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr14_+_55494323_55494345	0.27588	NKX2-3	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr9_+_125376948_125376948	0.274761	NKX2-3	ENST00000297913.2|OR1Q1|ENSG00000165202.2|olfactory receptor, family 1, subfamily Q, member 1
hg19_v2_chr8_-_74791051_74791145	0.272718	NKX2-3	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr1_-_175712665_175712761	0.270805	NKX2-3	ENST00000263525.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr2_+_71357744_71357791	0.269453	NKX2-3	ENST00000498451.2|MPHOSPH10|ENSG00000124383.4|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
hg19_v2_chr2_-_24270217_24270232	0.26842	NKX2-3	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr14_+_102276209_102276242	0.266765	NKX2-3	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr12_-_42878101_42878134	0.26639	NKX2-3	ENST00000552108.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr22_+_21213771_21213788	0.263089	NKX2-3	ENST00000439214.1|SNAP29|ENSG00000099940.7|synaptosomal-associated protein, 29kDa
hg19_v2_chr13_-_50018241_50018277	0.262457	NKX2-3	ENST00000409308.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr2_-_172291273_172291305	0.261506	NKX2-3	ENST00000442778.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000453846.1|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr3_+_183967409_183967497	0.258767	NKX2-3	ENST00000324557.4|ECE2|ENSG00000145194.13|endothelin converting enzyme 2 	ENST00000402825.3|ECE2|ENSG00000145194.13|endothelin converting enzyme 2
hg19_v2_chr17_-_58096336_58096413	0.257753	NKX2-3	ENST00000587125.1|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene 	ENST00000407042.3|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
hg19_v2_chr19_-_42746714_42746796	0.25549	NKX2-3	ENST00000222330.3|GSK3A|ENSG00000105723.7|glycogen synthase kinase 3 alpha
hg19_v2_chr1_-_200379104_200379128	0.255344	NKX2-3	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr2_+_64069240_64069332	0.254655	NKX2-3	ENST00000497883.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr16_-_2031464_2031550	0.252586	NKX2-3	ENST00000356120.4|NOXO1|ENSG00000196408.7|NADPH oxidase organizer 1 	ENST00000354249.4|NOXO1|ENSG00000196408.7|NADPH oxidase organizer 1
hg19_v2_chr19_-_39924349_39924401	0.245437	NKX2-3	ENST00000602153.1|RPS16|ENSG00000105193.4|ribosomal protein S16
hg19_v2_chr15_+_40674920_40674937	0.243746	NKX2-3	ENST00000416151.2|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein 	ENST00000249776.8|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein
hg19_v2_chr5_-_96518907_96518997	0.241361	NKX2-3	ENST00000508447.1|RIOK2|ENSG00000058729.6|RIO kinase 2 	ENST00000283109.3|RIOK2|ENSG00000058729.6|RIO kinase 2
hg19_v2_chr4_-_109541610_109541621	0.237561	NKX2-3	ENST00000510212.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head)
hg19_v2_chr10_-_32345305_32345376	0.237032	NKX2-3	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr19_+_56653064_56653103	0.236581	NKX2-3	ENST00000593100.1|ZNF444|ENSG00000167685.10|zinc finger protein 444
hg19_v2_chr12_+_79371565_79371593	0.235754	NKX2-3	ENST00000551304.1|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr4_-_141677267_141677291	0.235599	NKX2-3	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr20_-_31071309_31071385	0.234775	NKX2-3	ENST00000326071.4|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr6_+_42123141_42123279	0.234236	NKX2-3	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr5_+_179105615_179105666	0.232648	NKX2-3	ENST00000514383.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chrX_-_106362013_106362066	0.232421	NKX2-3	ENST00000372487.1|RBM41|ENSG00000089682.12|RNA binding motif protein 41 	ENST00000372479.3|RBM41|ENSG00000089682.12|RNA binding motif protein 41 	ENST00000203616.8|RBM41|ENSG00000089682.12|RNA binding motif protein 41
hg19_v2_chr11_-_64536521_64536543	0.229208	NKX2-3	ENST00000486867.1|SF1|ENSG00000168066.16|splicing factor 1
hg19_v2_chr11_+_17569375_17569375	0.229068	NKX2-3	ENST00000399397.1|OTOG|ENSG00000188162.6|otogelin
hg19_v2_chr1_-_202129704_202129772	0.227909	NKX2-3	ENST00000476061.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000544762.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000467283.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000464870.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000435759.2|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000486116.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000543735.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000308986.5|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000477625.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr19_-_46288917_46288971	0.227743	NKX2-3	ENST00000537879.1|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000596586.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein  	ENST00000595946.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein
hg19_v2_chr11_+_57435441_57435628	0.226653	NKX2-3	ENST00000528177.1|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5
hg19_v2_chr13_-_50018140_50018221	0.225506	NKX2-3	ENST00000410043.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000347776.5|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr2_-_201753980_201754026	0.224306	NKX2-3	ENST00000443398.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000286175.8|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000409449.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr13_-_30880979_30881008	0.222635	NKX2-3	ENST00000414289.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr15_-_90437195_90437261	0.222195	NKX2-3	ENST00000560940.1|AP3S2|ENSG00000157823.12|adaptor-related protein complex 3, sigma 2 subunit 	ENST00000558011.1|AP3S2|ENSG00000157823.12|adaptor-related protein complex 3, sigma 2 subunit
hg19_v2_chrX_-_115085422_115085485	0.221774	NKX2-3	ENST00000430756.2|RP11-761E20.1|ENSG00000235244.3|RP11-761E20.1
hg19_v2_chr20_-_33735070_33735175	0.220646	NKX2-3	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr6_+_49467671_49467693	0.218292	NKX2-3	ENST00000371197.4|GLYATL3|ENSG00000203972.5|glycine-N-acyltransferase-like 3 	ENST00000545705.1|GLYATL3|ENSG00000203972.5|glycine-N-acyltransferase-like 3
hg19_v2_chr16_+_2255710_2255789	0.216066	NKX2-3	ENST00000397124.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENST00000565250.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr1_-_152779104_152779133	0.215575	NKX2-3	ENST00000606576.1|LCE1C|ENSG00000197084.4|late cornified envelope 1C 	ENST00000368768.1|LCE1C|ENSG00000197084.4|late cornified envelope 1C
hg19_v2_chr11_+_65627974_65628026	0.214561	NKX2-3	ENST00000525768.1|MUS81|ENSG00000172732.7|MUS81 structure-specific endonuclease subunit
hg19_v2_chr1_+_202431859_202431871	0.213341	NKX2-3	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr14_+_102276132_102276178	0.211241	NKX2-3	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr6_+_149539106_149539137	0.208476	NKX2-3	ENST00000443992.1|RP1-111D6.3|ENSG00000228408.1|RP1-111D6.3
hg19_v2_chr17_-_6524159_6524233	0.206258	NKX2-3	ENST00000589033.1|KIAA0753|ENSG00000198920.5|KIAA0753
hg19_v2_chr12_-_104532062_104532071	0.205174	NKX2-3	ENST00000240055.3|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr10_+_79793518_79793641	0.203971	NKX2-3	ENST00000440692.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000435275.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000372360.3|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000360830.4|RPS24|ENSG00000138326.14|ribosomal protein S24
hg19_v2_chr1_+_202317815_202317854	0.20353	NKX2-3	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr1_+_230193521_230193545	0.20342	NKX2-3	ENST00000543760.1|GALNT2|ENSG00000143641.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)
hg19_v2_chrX_+_47420516_47420621	0.203216	NKX2-3	ENST00000377045.4|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000290277.6|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000377039.2|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog
hg19_v2_chr18_-_51750948_51751059	0.202022	NKX2-3	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr1_-_28559502_28559570	0.20012	NKX2-3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr1_-_155990580_155990750	0.199717	NKX2-3	ENST00000531917.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000480567.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000526212.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000529008.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000496742.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000295702.4|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta)
hg19_v2_chr2_+_64069459_64069579	0.198126	NKX2-3	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr6_-_2971494_2971544	0.196748	NKX2-3	ENST00000380539.1|SERPINB6|ENSG00000124570.13|serpin peptidase inhibitor, clade B (ovalbumin), member 6
hg19_v2_chr5_+_138210919_138211157	0.196277	NKX2-3	ENST00000522013.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520260.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523298.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520865.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519634.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517533.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523685.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519768.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517656.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521683.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521640.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519116.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr16_+_68877496_68877521	0.194111	NKX2-3	ENST00000261778.1|TANGO6|ENSG00000103047.3|transport and golgi organization 6 homolog (Drosophila)
hg19_v2_chr6_+_83072923_83072978	0.193661	NKX2-3	ENST00000535040.1|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr2_+_204103733_204103758	0.192233	NKX2-3	ENST00000443941.1|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1
hg19_v2_chr6_+_69942298_69942394	0.190583	NKX2-3	ENST00000238918.8|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr2_+_161993465_161993481	0.187497	NKX2-3	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr4_-_120550146_120550201	0.183713	NKX2-3	ENST00000354960.3|PDE5A|ENSG00000138735.11|phosphodiesterase 5A, cGMP-specific
hg19_v2_chr19_+_50148087_50148275	0.182864	NKX2-3	ENST00000601038.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1 	ENST00000595242.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1
hg19_v2_chr6_+_83073334_83073351	0.18272	NKX2-3	ENST00000369750.3|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr1_+_230883179_230883196	0.182264	NKX2-3	ENST00000366666.2|CAPN9|ENSG00000135773.8|calpain 9
hg19_v2_chr7_-_150974494_150974538	0.181092	NKX2-3	ENST00000392811.2|SMARCD3|ENSG00000082014.12|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
hg19_v2_chr1_-_26633067_26633145	0.179135	NKX2-3	ENST00000421827.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374215.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374223.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000357089.4|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000535108.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000314675.7|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000436301.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000423664.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374221.3|UBXN11|ENSG00000158062.16|UBX domain protein 11
hg19_v2_chr11_-_59481337_59481337	0.175082	NKX2-3	ENST00000307552.2|OR10V1|ENSG00000172289.2|olfactory receptor, family 10, subfamily V, member 1
hg19_v2_chr5_+_108083517_108083576	0.173557	NKX2-3	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chr1_-_197036364_197036401	0.172926	NKX2-3	ENST00000367412.1|F13B|ENSG00000143278.3|coagulation factor XIII, B polypeptide
hg19_v2_chr10_+_18041218_18041227	0.171645	NKX2-3	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr3_-_47950745_47950757	0.165857	NKX2-3	ENST00000429422.1|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr11_+_7595136_7595171	0.164587	NKX2-3	ENST00000529575.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr3_-_42623805_42623824	0.162487	NKX2-3	ENST00000456515.1|SEC22C|ENSG00000093183.9|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
hg19_v2_chr17_-_2966901_2966901	0.161096	NKX2-3	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr2_+_161993412_161993453	0.155018	NKX2-3	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr20_+_55043647_55043751	0.154978	NKX2-3	ENST00000023939.4|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000395881.3|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000357348.5|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000449062.1|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000435342.2|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1
hg19_v2_chr14_-_90798273_90798323	0.15452	NKX2-3	ENST00000357904.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr12_-_42719885_42719926	0.153513	NKX2-3	ENST00000552673.1|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1 	ENST00000266529.3|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1 	ENST00000552235.1|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1
hg19_v2_chrX_-_69509738_69509829	0.152204	NKX2-3	ENST00000374454.1|PDZD11|ENSG00000120509.6|PDZ domain containing 11 	ENST00000239666.4|PDZD11|ENSG00000120509.6|PDZ domain containing 11
hg19_v2_chr9_+_127020202_127020292	0.15169	NKX2-3	ENST00000373600.3|NEK6|ENSG00000119408.12|NIMA-related kinase 6 	ENST00000320246.5|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr20_-_30539773_30539895	0.150054	NKX2-3	ENST00000202017.4|PDRG1|ENSG00000088356.4|p53 and DNA-damage regulated 1
hg19_v2_chr8_+_19674651_19674670	0.148598	NKX2-3	ENST00000397977.3|INTS10|ENSG00000104613.7|integrator complex subunit 10
hg19_v2_chr20_-_31071239_31071307	0.147218	NKX2-3	ENST00000359676.5|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr19_+_17622415_17622481	0.143279	NKX2-3	ENST00000252603.2|PGLS|ENSG00000130313.2|6-phosphogluconolactonase 	ENST00000600923.1|PGLS|ENSG00000130313.2|6-phosphogluconolactonase
hg19_v2_chr7_-_2883928_2883993	0.141876	NKX2-3	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr3_-_69062742_69062757	0.141612	NKX2-3	ENST00000424374.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr8_-_20040601_20040630	0.141209	NKX2-3	ENST00000265808.7|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000522513.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr10_+_17794251_17794260	0.140023	NKX2-3	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr7_+_96747030_96747041	0.13714	NKX2-3	ENST00000360382.4|ACN9|ENSG00000196636.7|ACN9 homolog (S. cerevisiae)
hg19_v2_chr1_+_230883128_230883162	0.136741	NKX2-3	ENST00000271971.2|CAPN9|ENSG00000135773.8|calpain 9 	ENST00000354537.1|CAPN9|ENSG00000135773.8|calpain 9
hg19_v2_chr1_+_31971828_31971841	0.136594	NKX2-3	ENST00000418618.1|RP11-439L8.3|ENSG00000228682.2|RP11-439L8.3
hg19_v2_chr12_-_122712038_122712081	0.134519	NKX2-3	ENST00000413918.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein 	ENST00000443649.3|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr3_+_39093481_39093520	0.133668	NKX2-3	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chr2_-_178128528_178128574	0.133512	NKX2-3	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr17_-_26662440_26662463	0.131829	NKX2-3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr17_-_26662464_26662519	0.131415	NKX2-3	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr3_+_133524459_133524459	0.130582	NKX2-3	ENST00000484684.1|SRPRB|ENSG00000144867.7|signal recognition particle receptor, B subunit
hg19_v2_chr20_+_60962143_60962172	0.130047	NKX2-3	ENST00000343986.4|RPS21|ENSG00000171858.13|ribosomal protein S21
hg19_v2_chrX_-_134049262_134049297	0.129996	NKX2-3	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr7_-_127255724_127255780	0.127464	NKX2-3	ENST00000463946.1|PAX4|ENSG00000106331.10|paired box 4 	ENST00000341640.2|PAX4|ENSG00000106331.10|paired box 4
hg19_v2_chr10_-_73976884_73976894	0.126686	NKX2-3	ENST00000317126.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000545550.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr2_+_64069016_64069039	0.126301	NKX2-3	ENST00000488245.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr17_+_26662597_26662628	0.125643	NKX2-3	ENST00000544907.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr4_+_158142750_158142836	0.124799	NKX2-3	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr11_+_65627865_65627958	0.123551	NKX2-3	ENST00000308110.4|MUS81|ENSG00000172732.7|MUS81 structure-specific endonuclease subunit
hg19_v2_chr11_-_14521379_14521573	0.121266	NKX2-3	ENST00000249923.3|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000529866.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000439561.2|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000534771.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr7_-_80548493_80548524	0.120728	NKX2-3	ENST00000536800.1|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr22_+_25202232_25202286	0.119082	NKX2-3	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr11_+_11863500_11863576	0.118864	NKX2-3	ENST00000527733.1|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47 	ENST00000539466.1|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47
hg19_v2_chr2_-_151905288_151905288	0.117364	NKX2-3	ENST00000409243.1|AC023469.1|ENSG00000222031.1|HCG1817310; Uncharacterized protein
hg19_v2_chr6_-_144329531_144329546	0.115524	NKX2-3	ENST00000429150.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000392309.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000416623.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000392307.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr1_-_212965104_212965141	0.115009	NKX2-3	ENST00000422588.2|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366975.6|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366977.3|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366976.1|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component
hg19_v2_chr3_-_69062764_69062788	0.11173	NKX2-3	ENST00000295571.5|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr8_-_93029520_93029591	0.110258	NKX2-3	ENST00000521553.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr14_+_100531738_100531766	0.109315	NKX2-3	ENST00000555706.1|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr17_+_61905058_61905238	0.109171	NKX2-3	ENST00000375812.4|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000581882.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5
hg19_v2_chr19_+_17448348_17448406	0.109134	NKX2-3	ENST00000324894.8|GTPBP3|ENSG00000130299.12|GTP binding protein 3 (mitochondrial) 	ENST00000358792.7|GTPBP3|ENSG00000130299.12|GTP binding protein 3 (mitochondrial) 	ENST00000600625.1|GTPBP3|ENSG00000130299.12|GTP binding protein 3 (mitochondrial)
hg19_v2_chr2_+_10987703_10987703	0.107743	NKX2-3	ENST00000418835.1|AC092687.4|ENSG00000232056.1|Uncharacterized protein
hg19_v2_chr19_+_39616410_39616474	0.107096	NKX2-3	ENST00000602004.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599470.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000321944.4|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593480.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000358301.3|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593690.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599386.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4
hg19_v2_chr9_+_36036430_36036430	0.106466	NKX2-3	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr14_+_22992573_22992573	0.104112	NKX2-3	ENST00000390516.1|TRAJ21|ENSG00000211868.1|T cell receptor alpha joining 21
hg19_v2_chr2_+_64068844_64068997	0.101338	NKX2-3	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr4_-_109541539_109541585	0.100609	NKX2-3	ENST00000509984.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000507248.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000506795.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head)
hg19_v2_chr2_-_98972468_98972468	0.100453	NKX2-3	ENST00000454230.1|AC092675.3|ENSG00000222000.3|Uncharacterized protein
hg19_v2_chr5_-_151784838_151784841	0.0999916	NKX2-3	ENST00000255262.3|NMUR2|ENSG00000132911.4|neuromedin U receptor 2
hg19_v2_chr19_-_18433910_18434084	0.0999112	NKX2-3	ENST00000594828.3|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000593829.1|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr2_+_204103663_204103730	0.0995336	NKX2-3	ENST00000356079.4|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1 	ENST00000429815.2|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1
hg19_v2_chr1_+_168195229_168195294	0.09908	NKX2-3	ENST00000271375.4|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2 	ENST00000367825.3|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2
hg19_v2_chr10_+_13203543_13203587	0.0984605	NKX2-3	ENST00000378714.3|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000479669.1|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000484800.2|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10
hg19_v2_chr20_+_56964253_56964369	0.0978347	NKX2-3	ENST00000395802.3|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr10_-_27529486_27529497	0.0959665	NKX2-3	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr10_+_27793197_27793247	0.0959326	NKX2-3	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr20_-_33539655_33539680	0.0958675	NKX2-3	ENST00000451957.2|GSS|ENSG00000100983.5|glutathione synthetase
hg19_v2_chr11_-_9088284_9088330	0.094431	NKX2-3	ENST00000531429.1|SCUBE2|ENSG00000175356.8|signal peptide, CUB domain, EGF-like 2
hg19_v2_chr1_+_155278539_155278559	0.0935977	NKX2-3	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr12_-_53189892_53189905	0.0935585	NKX2-3	ENST00000309505.3|KRT3|ENSG00000186442.6|keratin 3 	ENST00000417996.2|KRT3|ENSG00000186442.6|keratin 3
hg19_v2_chr3_-_125802765_125802990	0.0934757	NKX2-3	ENST00000514891.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000512470.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000504035.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000360370.4|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000513723.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000510651.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000514333.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3
hg19_v2_chr17_-_61905005_61905041	0.0903641	NKX2-3	ENST00000584574.1|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli) 	ENST00000585145.1|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli) 	ENST00000427159.2|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli)
hg19_v2_chr9_+_116263778_116263793	0.0888018	NKX2-3	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr17_-_39023462_39023477	0.0873443	NKX2-3	ENST00000251643.4|KRT12|ENSG00000187242.4|keratin 12
hg19_v2_chr2_-_31440377_31440411	0.0858361	NKX2-3	ENST00000444918.2|CAPN14|ENSG00000214711.5|calpain 14 	ENST00000403897.3|CAPN14|ENSG00000214711.5|calpain 14
hg19_v2_chr16_+_69458537_69458686	0.0843922	NKX2-3	ENST00000515314.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000561792.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000568237.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v2_chr15_+_85147127_85147142	0.0802078	NKX2-3	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr12_-_122711968_122712008	0.0787709	NKX2-3	ENST00000485724.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr17_+_26662679_26662720	0.0781115	NKX2-3	ENST00000578158.1|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr3_+_113775576_113775592	0.0779992	NKX2-3	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr11_-_46638378_46638399	0.077676	NKX2-3	ENST00000529192.1|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr4_+_88754113_88754139	0.0765366	NKX2-3	ENST00000560249.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000540395.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000511670.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000361056.3|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr9_+_131644388_131644393	0.072339	NKX2-3	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr13_+_50018402_50018469	0.0705652	NKX2-3	ENST00000354234.4|SETDB2|ENSG00000136169.12|SET domain, bifurcated 2
hg19_v2_chr11_+_11863579_11863618	0.0701389	NKX2-3	ENST00000399455.2|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47
hg19_v2_chr7_+_34697973_34698021	0.068789	NKX2-3	ENST00000381539.3|NPSR1|ENSG00000187258.9|neuropeptide S receptor 1
hg19_v2_chr14_-_75643296_75643341	0.0685277	NKX2-3	ENST00000303575.4|TMED10|ENSG00000170348.4|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v2_chr16_+_8736232_8736325	0.0672004	NKX2-3	ENST00000562973.1|METTL22|ENSG00000067365.10|methyltransferase like 22
hg19_v2_chr13_+_23993097_23993110	0.0667738	NKX2-3	ENST00000443092.1|SACS-AS1|ENSG00000229558.1|SACS antisense RNA 1
hg19_v2_chr12_+_25205155_25205214	0.0666204	NKX2-3	ENST00000550945.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr8_+_41386761_41386787	0.0620869	NKX2-3	ENST00000523277.2|GINS4|ENSG00000147536.7|GINS complex subunit 4 (Sld5 homolog)
hg19_v2_chr17_-_36760865_36760976	0.0592345	NKX2-3	ENST00000584266.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr18_-_33702078_33702108	0.0560645	NKX2-3	ENST00000586829.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr1_-_216896674_216896778	0.0555904	NKX2-3	ENST00000475275.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000469486.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000481543.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr1_+_206317450_206317478	0.0547971	NKX2-3	ENST00000358184.2|CTSE|ENSG00000196188.6|cathepsin E 	ENST00000361052.3|CTSE|ENSG00000196188.6|cathepsin E 	ENST00000360218.2|CTSE|ENSG00000196188.6|cathepsin E
hg19_v2_chr12_-_122018859_122018941	0.0522416	NKX2-3	ENST00000536437.1|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000377071.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000538046.2|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr2_+_90458201_90458201	0.0510933	NKX2-3	ENST00000603238.1|CH17-132F21.1|ENSG00000270999.1|Uncharacterized protein
hg19_v2_chr9_+_135906076_135906135	0.05065	NKX2-3	ENST00000372097.5|GTF3C5|ENSG00000148308.13|general transcription factor IIIC, polypeptide 5, 63kDa 	ENST00000440319.1|GTF3C5|ENSG00000148308.13|general transcription factor IIIC, polypeptide 5, 63kDa
hg19_v2_chrY_+_26997726_26997726	0.0493713	NKX2-3	ENST00000382296.2|DAZ4|ENSG00000205916.6|deleted in azoospermia 4
hg19_v2_chr8_+_1919481_1919563	0.0489783	NKX2-3	ENST00000518539.2|KBTBD11-OT1|ENSG00000253696.2|KBTBD11 overlapping transcript 1 (non-protein coding)
hg19_v2_chr1_+_110091189_110091268	0.0488263	NKX2-3	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr7_-_130353553_130353598	0.0484374	NKX2-3	ENST00000330992.7|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2 	ENST00000445977.2|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2
hg19_v2_chr9_+_71819927_71820053	0.0446315	NKX2-3	ENST00000535702.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr16_+_32264040_32264040	0.0441371	NKX2-3	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr3_+_10157276_10157377	0.0415938	NKX2-3	ENST00000530758.1|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit 	ENST00000256463.6|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit
hg19_v2_chr5_+_159656437_159656517	0.0406703	NKX2-3	ENST00000402432.3|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr9_+_131644398_131644475	0.0406065	NKX2-3	ENST00000372599.3|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr12_+_82347498_82347593	0.0397526	NKX2-3	ENST00000550506.1|RP11-362A1.1|ENSG00000257747.1|RP11-362A1.1
hg19_v2_chr7_-_87342564_87342617	0.039306	NKX2-3	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr11_+_33902189_33902189	0.0384183	NKX2-3	ENST00000330381.2|AC132216.1|ENSG00000184566.2|HCG1785179; PRO1787; Uncharacterized protein
hg19_v2_chr3_-_10452359_10452453	0.0365902	NKX2-3	ENST00000452124.1|ATP2B2|ENSG00000157087.12|ATPase, Ca++ transporting, plasma membrane 2
hg19_v2_chr2_+_36923933_36924020	0.0364367	NKX2-3	ENST00000497382.1|VIT|ENSG00000205221.8|vitrin 	ENST00000404084.1|VIT|ENSG00000205221.8|vitrin 	ENST00000379241.3|VIT|ENSG00000205221.8|vitrin 	ENST00000401530.1|VIT|ENSG00000205221.8|vitrin
hg19_v2_chr5_-_77072085_77072139	0.0362223	NKX2-3	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr13_+_50570019_50570028	0.0334248	NKX2-3	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr1_+_222817629_222817714	0.0325244	NKX2-3	ENST00000340535.7|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr1_-_151804314_151804348	0.0324894	NKX2-3	ENST00000318247.6|RORC|ENSG00000143365.12|RAR-related orphan receptor C
hg19_v2_chr16_-_58663720_58663790	0.0321968	NKX2-3	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr10_-_76868866_76868891	0.0321115	NKX2-3	ENST00000607487.1|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13
hg19_v2_chr19_-_10341948_10341965	0.0316477	NKX2-3	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr2_-_95787738_95787763	0.0308919	NKX2-3	ENST00000272418.2|MRPS5|ENSG00000144029.7|mitochondrial ribosomal protein S5
hg19_v2_chr4_+_88754069_88754112	0.0271881	NKX2-3	ENST00000395102.4|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000497649.2|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr1_-_89488510_89488565	0.0257924	NKX2-3	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr19_-_12946236_12946262	0.024121	NKX2-3	ENST00000589272.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000393233.2|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr2_-_54197915_54197977	0.0202046	NKX2-3	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr3_+_98482159_98482172	0.0189554	NKX2-3	ENST00000468553.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr16_-_8622226_8622226	0.0178004	NKX2-3	ENST00000568335.1|TMEM114|ENSG00000232258.2|transmembrane protein 114
hg19_v2_chr7_-_1609591_1609690	0.0170718	NKX2-3	ENST00000288607.2|PSMG3|ENSG00000157778.4|proteasome (prosome, macropain) assembly chaperone 3 	ENST00000404674.3|PSMG3|ENSG00000157778.4|proteasome (prosome, macropain) assembly chaperone 3
hg19_v2_chr1_+_41157671_41157695	0.0167067	NKX2-3	ENST00000534399.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma 	ENST00000372653.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr14_+_36295638_36295652	0.0166723	NKX2-3	ENST00000543183.1|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr17_-_8055747_8055758	0.0160148	NKX2-3	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr1_-_213188772_213188856	0.0153357	NKX2-3	ENST00000544555.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr10_-_112678692_112678695	0.0136243	NKX2-3	ENST00000605742.1|BBIP1|ENSG00000214413.3|BBSome interacting protein 1
hg19_v2_chr9_+_71820057_71820078	0.0107955	NKX2-3	ENST00000539225.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr16_+_53412368_53412387	0.00784501	NKX2-3	ENST00000565189.1|RP11-44F14.2|ENSG00000261804.1|RP11-44F14.2
hg19_v2_chr16_+_14564842_14564842	0.0069972	NKX2-3	ENST00000599734.1|AC092291.2|ENSG00000269049.1|AC092291.2
hg19_v2_chr18_+_22040593_22040616	0.00662239	NKX2-3	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr3_+_23847432_23847512	0.00472335	NKX2-3	ENST00000346855.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr16_+_3185125_3185173	0.000611634	NKX2-3	ENST00000576416.1|ZNF213|ENSG00000085644.9|zinc finger protein 213
