hg19_v2_chr16_-_20566616_20566616	3.85637	PAX1_PAX9	ENST00000569163.1|ACSM2B|ENSG00000066813.10|acyl-CoA synthetase medium-chain family member 2B
hg19_v2_chr4_+_123747834_123747863	3.54278	PAX1_PAX9	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr4_+_123747979_123747994	3.30146	PAX1_PAX9	ENST00000608478.1|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr2_-_207630033_207630061	2.83423	PAX1_PAX9	ENST00000449792.1|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr2_-_207629997_207630030	2.7561	PAX1_PAX9	ENST00000454776.2|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr9_+_33750667_33750819	2.5525	PAX1_PAX9	ENST00000457896.1|PRSS3|ENSG00000010438.12|protease, serine, 3 	ENST00000342836.4|PRSS3|ENSG00000010438.12|protease, serine, 3 	ENST00000429677.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr7_+_36429424_36429459	2.47578	PAX1_PAX9	ENST00000396068.2|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr7_+_36429409_36429420	2.40543	PAX1_PAX9	ENST00000265748.2|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr14_+_24540046_24540132	2.23785	PAX1_PAX9	ENST00000397016.2|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000537691.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000560356.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000558450.1|CPNE6|ENSG00000100884.5|copine VI (neuronal)
hg19_v2_chr19_-_409134_409156	2.16651	PAX1_PAX9	ENST00000332235.6|C2CD4C|ENSG00000183186.6|C2 calcium-dependent domain containing 4C
hg19_v2_chr9_+_33750515_33750648	2.11725	PAX1_PAX9	ENST00000361005.5|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr6_-_137366163_137366298	2.10543	PAX1_PAX9	ENST00000367748.1|IL20RA|ENSG00000016402.8|interleukin 20 receptor, alpha
hg19_v2_chr5_+_55354822_55354877	1.7826	PAX1_PAX9	ENST00000511861.1|CTD-2227I18.1|ENSG00000249236.1|CTD-2227I18.1
hg19_v2_chr9_-_104249400_104249512	1.64748	PAX1_PAX9	ENST00000374848.3|TMEM246|ENSG00000165152.4|transmembrane protein 246
hg19_v2_chr18_-_47813940_47814021	1.4433	PAX1_PAX9	ENST00000586837.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1 	ENST00000412036.2|CXXC1|ENSG00000154832.10|CXXC finger protein 1 	ENST00000589940.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1
hg19_v2_chr19_-_18995029_18995050	1.41619	PAX1_PAX9	ENST00000596048.1|CERS1|ENSG00000223802.3|ceramide synthase 1
hg19_v2_chr11_+_61522844_61522875	1.30964	PAX1_PAX9	ENST00000265460.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr18_-_47814032_47814079	1.30471	PAX1_PAX9	ENST00000589548.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1 	ENST00000591474.1|CXXC1|ENSG00000154832.10|CXXC finger protein 1
hg19_v2_chr4_-_171011084_171011147	1.29366	PAX1_PAX9	ENST00000337664.4|AADAT|ENSG00000109576.9|aminoadipate aminotransferase
hg19_v2_chr9_+_33795533_33795562	1.27259	PAX1_PAX9	ENST00000379405.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr18_+_39766626_39766668	1.25311	PAX1_PAX9	ENST00000593234.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000585627.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000591199.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000586990.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000593051.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000593316.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000591381.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000585639.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000589068.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907
hg19_v2_chr9_-_124991124_124991246	1.21562	PAX1_PAX9	ENST00000394319.4|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000340587.3|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr3_+_195447738_195447761	1.1056	PAX1_PAX9	ENST00000447234.2|MUC20|ENSG00000176945.12|mucin 20, cell surface associated 	ENST00000320736.6|MUC20|ENSG00000176945.12|mucin 20, cell surface associated 	ENST00000436408.1|MUC20|ENSG00000176945.12|mucin 20, cell surface associated
hg19_v2_chr7_-_22234381_22234430	1.09033	PAX1_PAX9	ENST00000458533.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr4_-_171011323_171011538	1.07846	PAX1_PAX9	ENST00000509167.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase 	ENST00000353187.2|AADAT|ENSG00000109576.9|aminoadipate aminotransferase 	ENST00000507375.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase 	ENST00000515480.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase
hg19_v2_chr2_-_175712270_175712316	1.06214	PAX1_PAX9	ENST00000295497.7|CHN1|ENSG00000128656.9|chimerin 1 	ENST00000444394.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr17_+_39969183_39969265	1.00943	PAX1_PAX9	ENST00000321562.4|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chr2_-_175711978_175712109	0.992766	PAX1_PAX9	ENST00000409089.2|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr8_-_23282820_23282846	0.978467	PAX1_PAX9	ENST00000520871.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr8_-_23282797_23282804	0.948795	PAX1_PAX9	ENST00000524144.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr19_+_14184370_14184428	0.883534	PAX1_PAX9	ENST00000590772.1|hsa-mir-1199|ENSG00000141854.3|hsa-mir-1199
hg19_v2_chr1_-_162838551_162838628	0.839682	PAX1_PAX9	ENST00000367910.1|C1orf110|ENSG00000185860.9|chromosome 1 open reading frame 110 	ENST00000367912.2|C1orf110|ENSG00000185860.9|chromosome 1 open reading frame 110 	ENST00000367911.2|C1orf110|ENSG00000185860.9|chromosome 1 open reading frame 110
hg19_v2_chr4_-_163085141_163085187	0.810087	PAX1_PAX9	ENST00000427802.2|FSTL5|ENSG00000168843.9|follistatin-like 5 	ENST00000306100.5|FSTL5|ENSG00000168843.9|follistatin-like 5
hg19_v2_chr8_-_23261589_23261753	0.78394	PAX1_PAX9	ENST00000524168.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000523833.2|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000519243.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000389131.3|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr20_-_17641097_17641152	0.77656	PAX1_PAX9	ENST00000246043.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr11_+_63870660_63870660	0.724184	PAX1_PAX9	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr19_-_5838734_5838762	0.692311	PAX1_PAX9	ENST00000532464.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000528505.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
hg19_v2_chr19_-_5838768_5838836	0.684705	PAX1_PAX9	ENST00000527106.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000531199.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000529165.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
hg19_v2_chr17_+_39968926_39969042	0.680655	PAX1_PAX9	ENST00000585664.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa 	ENST00000585922.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa 	ENST00000429461.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chr17_-_3461092_3461126	0.672183	PAX1_PAX9	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr10_-_99393242_99393344	0.645251	PAX1_PAX9	ENST00000370635.3|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000478953.1|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000335628.3|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr10_-_99393208_99393237	0.539905	PAX1_PAX9	ENST00000307450.6|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr6_+_159291090_159291223	0.501986	PAX1_PAX9	ENST00000367073.4|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99 	ENST00000608817.1|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99
hg19_v2_chr12_+_57828521_57828543	0.500685	PAX1_PAX9	ENST00000309668.2|INHBC|ENSG00000175189.3|inhibin, beta C
hg19_v2_chr7_-_19157248_19157295	0.471108	PAX1_PAX9	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr19_+_48337701_48337701	0.468428	PAX1_PAX9	ENST00000535362.1|TPRX2P|ENSG00000259009.3|tetra-peptide repeat homeobox 2 pseudogene
hg19_v2_chrX_-_132091284_132091372	0.460809	PAX1_PAX9	ENST00000370833.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr3_-_57113281_57113312	0.455507	PAX1_PAX9	ENST00000468466.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr11_+_6947720_6947812	0.451488	PAX1_PAX9	ENST00000414517.2|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr17_+_15848231_15848231	0.444762	PAX1_PAX9	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr1_-_204165610_204165626	0.378227	PAX1_PAX9	ENST00000367194.4|KISS1|ENSG00000170498.7|KiSS-1 metastasis-suppressor
hg19_v2_chr11_-_67397371_67397416	0.336301	PAX1_PAX9	ENST00000376693.2|NUDT8|ENSG00000167799.5|nudix (nucleoside diphosphate linked moiety X)-type motif 8 	ENST00000301490.4|NUDT8|ENSG00000167799.5|nudix (nucleoside diphosphate linked moiety X)-type motif 8
hg19_v2_chr9_+_96793076_96793128	0.33306	PAX1_PAX9	ENST00000375360.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chrX_-_153707545_153707596	0.3158	PAX1_PAX9	ENST00000357360.4|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr6_+_3118926_3118976	0.288016	PAX1_PAX9	ENST00000380379.5|BPHL|ENSG00000137274.8|biphenyl hydrolase-like (serine hydrolase)
hg19_v2_chr2_-_39414848_39414848	0.286852	PAX1_PAX9	ENST00000451199.1|CDKL4|ENSG00000205111.4|cyclin-dependent kinase-like 4
hg19_v2_chr9_-_21142144_21142144	0.265682	PAX1_PAX9	ENST00000380229.2|IFNW1|ENSG00000177047.5|interferon, omega 1
hg19_v2_chr12_+_58138800_58138860	0.239873	PAX1_PAX9	ENST00000547992.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000552816.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000547472.1|TSPAN31|ENSG00000135452.5|tetraspanin 31
hg19_v2_chr22_+_39745930_39746012	0.22166	PAX1_PAX9	ENST00000318801.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000216155.7|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000406293.3|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000328933.5|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr9_+_6716478_6716551	0.207248	PAX1_PAX9	ENST00000452643.1|RP11-390F4.3|ENSG00000225489.2|RP11-390F4.3
hg19_v2_chr12_-_122658746_122658769	0.195644	PAX1_PAX9	ENST00000377035.1|IL31|ENSG00000204671.1|interleukin 31
hg19_v2_chr14_+_64854958_64855091	0.190207	PAX1_PAX9	ENST00000555709.2|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554739.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554768.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000216605.8|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
hg19_v2_chr6_+_34857019_34857117	0.187984	PAX1_PAX9	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr17_-_39968406_39968451	0.168787	PAX1_PAX9	ENST00000393928.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr6_+_159290917_159290971	0.137179	PAX1_PAX9	ENST00000367072.1|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99
hg19_v2_chr2_+_234160340_234160360	0.135528	PAX1_PAX9	ENST00000417017.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000392020.4|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000392018.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae)
hg19_v2_chr14_+_39703112_39703135	0.131476	PAX1_PAX9	ENST00000555143.1|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2 	ENST00000280082.3|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2
hg19_v2_chr6_+_132891461_132891461	0.111439	PAX1_PAX9	ENST00000275198.1|TAAR6|ENSG00000146383.7|trace amine associated receptor 6
hg19_v2_chr4_+_75230853_75230871	0.0898767	PAX1_PAX9	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr16_-_84076241_84076384	0.0810318	PAX1_PAX9	ENST00000568178.1|SLC38A8|ENSG00000166558.6|solute carrier family 38, member 8
hg19_v2_chr2_+_234160217_234160335	0.0752641	PAX1_PAX9	ENST00000392017.4|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000347464.5|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000444735.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000373525.5|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000419681.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae)
hg19_v2_chr5_+_133842243_133842269	0.0665878	PAX1_PAX9	ENST00000515627.2|AC005355.2|ENSG00000251169.2|AC005355.2
hg19_v2_chr13_+_21141270_21141349	0.0556935	PAX1_PAX9	ENST00000319980.6|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas) 	ENST00000537103.1|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas) 	ENST00000389373.3|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas)
hg19_v2_chr13_+_98086445_98086493	0.0460684	PAX1_PAX9	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr12_-_101801505_101801598	0.00562066	PAX1_PAX9	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chr1_+_213031570_213031597	0.00498403	PAX1_PAX9	ENST00000366971.4|FLVCR1|ENSG00000162769.8|feline leukemia virus subgroup C cellular receptor 1
