hg19_v2_chr14_+_22446680_22446721	2.26625	PAX8	ENST00000390443.3|TRAV8-6|ENSG00000211795.3|T cell receptor alpha variable 8-6
hg19_v2_chr20_+_44350968_44350994	1.73772	PAX8	ENST00000279058.3|SPINT4|ENSG00000149651.3|serine peptidase inhibitor, Kunitz type 4
hg19_v2_chr10_+_85933494_85933568	1.57593	PAX8	ENST00000372126.3|C10orf99|ENSG00000188373.4|chromosome 10 open reading frame 99
hg19_v2_chr7_-_142181009_142181021	1.54456	PAX8	ENST00000390368.2|TRBV6-5|ENSG00000211721.2|T cell receptor beta variable 6-5
hg19_v2_chr1_+_115642293_115642304	1.49225	PAX8	ENST00000448680.1|RP4-666F24.3|ENSG00000233730.1|RP4-666F24.3
hg19_v2_chr1_-_186649543_186649563	1.34996	PAX8	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr7_+_142428476_142428500	1.33546	PAX8	ENST00000390400.2|TRBV28|ENSG00000211753.2|T cell receptor beta variable 28
hg19_v2_chr1_-_161600990_161601003	1.28958	PAX8	ENST00000531221.1|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
hg19_v2_chr1_-_161600942_161600975	1.18946	PAX8	ENST00000421702.2|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
hg19_v2_chr11_+_60223312_60223353	1.13246	PAX8	ENST00000532491.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000532073.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000534668.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000528313.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000533306.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chrX_-_151938171_151938240	1.06649	PAX8	ENST00000393902.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000417212.1|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000370278.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3
hg19_v2_chr14_-_91710852_91710893	1.06433	PAX8	ENST00000535815.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000529102.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr20_-_42355629_42355651	1.06411	PAX8	ENST00000373003.1|GTSF1L|ENSG00000124196.5|gametocyte specific factor 1-like
hg19_v2_chr19_-_7766991_7767038	1.05261	PAX8	ENST00000597921.1|FCER2|ENSG00000104921.10|Fc fragment of IgE, low affinity II, receptor for (CD23) 	ENST00000346664.5|FCER2|ENSG00000104921.10|Fc fragment of IgE, low affinity II, receptor for (CD23)
hg19_v2_chr11_+_1092184_1092208	1.04958	PAX8	ENST00000361558.6|MUC2|ENSG00000198788.7|mucin 2, oligomeric mucus/gel-forming
hg19_v2_chr14_+_22458631_22458735	1.04823	PAX8	ENST00000390444.1|TRAV16|ENSG00000211796.1|T cell receptor alpha variable 16
hg19_v2_chr2_+_217735493_217735496	1.04577	PAX8	ENST00000456163.1|AC007557.1|ENSG00000223874.1|HCG1816075; Uncharacterized protein
hg19_v2_chr2_+_90259593_90259593	1.04522	PAX8	ENST00000471857.1|IGKV1D-8|ENSG00000239819.1|immunoglobulin kappa variable 1D-8
hg19_v2_chr15_+_34638066_34638129	1.04099	PAX8	ENST00000333756.4|NUTM1|ENSG00000184507.11|NUT midline carcinoma, family member 1
hg19_v2_chr2_+_185463093_185463181	1.03892	PAX8	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr19_-_40228657_40228674	1.03475	PAX8	ENST00000221804.4|CLC|ENSG00000105205.6|Charcot-Leyden crystal galectin
hg19_v2_chr11_+_60223225_60223297	1.02186	PAX8	ENST00000524807.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000345732.4|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chr19_+_42301079_42301090	1.00153	PAX8	ENST00000596544.1|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr6_-_6711235_6711379	0.984098	PAX8	ENST00000432823.2|RP1-80N2.2|ENSG00000226281.2|RP1-80N2.2
hg19_v2_chr1_-_25256368_25256476	0.973115	PAX8	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr3_-_169587621_169587728	0.956369	PAX8	ENST00000523069.1|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000316428.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000264676.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31
hg19_v2_chr1_-_27952741_27952753	0.936376	PAX8	ENST00000399173.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr7_-_142176790_142176842	0.922741	PAX8	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4 (gene/pseudogene)
hg19_v2_chr19_+_42300548_42300559	0.889665	PAX8	ENST00000344550.4|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr6_-_27858570_27858611	0.882534	PAX8	ENST00000359303.2|HIST1H3J|ENSG00000197153.3|histone cluster 1, H3j
hg19_v2_chr12_-_92821922_92821924	0.86382	PAX8	ENST00000538965.1|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand 	ENST00000378487.2|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand
hg19_v2_chr6_+_135502501_135502652	0.858491	PAX8	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr8_+_7353368_7353368	0.824436	PAX8	ENST00000355602.2|DEFB107B|ENSG00000198129.2|defensin, beta 107B
hg19_v2_chr19_-_52254050_52254070	0.81213	PAX8	ENST00000600815.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr11_+_117857063_117857121	0.811195	PAX8	ENST00000227752.3|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000541785.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000545409.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha
hg19_v2_chr22_+_22730353_22730360	0.810477	PAX8	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg19_v2_chr8_-_126963487_126963498	0.802846	PAX8	ENST00000518964.1|LINC00861|ENSG00000245164.2|long intergenic non-protein coding RNA 861
hg19_v2_chr17_-_60883993_60884014	0.802574	PAX8	ENST00000583803.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 	ENST00000456609.2|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr19_+_12862604_12862625	0.793923	PAX8	ENST00000553030.1|BEST2|ENSG00000039987.2|bestrophin 2
hg19_v2_chr2_+_231860830_231861104	0.781987	PAX8	ENST00000424440.1|SPATA3|ENSG00000173699.11|spermatogenesis associated 3 	ENST00000452881.1|SPATA3|ENSG00000173699.11|spermatogenesis associated 3 	ENST00000433428.2|SPATA3|ENSG00000173699.11|spermatogenesis associated 3 	ENST00000455816.1|SPATA3|ENSG00000173699.11|spermatogenesis associated 3 	ENST00000440792.1|SPATA3|ENSG00000173699.11|spermatogenesis associated 3 	ENST00000423134.1|SPATA3|ENSG00000173699.11|spermatogenesis associated 3
hg19_v2_chr1_+_160709029_160709047	0.777523	PAX8	ENST00000444090.2|SLAMF7|ENSG00000026751.12|SLAM family member 7 	ENST00000441662.2|SLAMF7|ENSG00000026751.12|SLAM family member 7
hg19_v2_chr19_-_52133588_52133588	0.771695	PAX8	ENST00000570106.2|SIGLEC5|ENSG00000105501.7|sialic acid binding Ig-like lectin 5
hg19_v2_chr1_-_27953031_27953113	0.771599	PAX8	ENST00000374003.3|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr6_-_44233361_44233500	0.75734	PAX8	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr12_+_18891045_18891066	0.754234	PAX8	ENST00000317658.3|CAPZA3|ENSG00000177938.3|capping protein (actin filament) muscle Z-line, alpha 3
hg19_v2_chr1_-_27952617_27952652	0.72439	PAX8	ENST00000457296.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr2_+_79252834_79252861	0.724322	PAX8	ENST00000409471.1|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr6_+_135502466_135502489	0.720857	PAX8	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr7_+_129984630_129984701	0.716768	PAX8	ENST00000355388.3|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000497503.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000463587.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000461828.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000494311.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000466363.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000485477.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000431780.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000474905.1|CPA5|ENSG00000158525.11|carboxypeptidase A5
hg19_v2_chr2_-_79386786_79386886	0.709892	PAX8	ENST00000393878.1|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000305165.2|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000409839.3|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha
hg19_v2_chr14_-_106054659_106054732	0.704614	PAX8	ENST00000390539.2|IGHA2|ENSG00000211890.3|immunoglobulin heavy constant alpha 2 (A2m marker)
hg19_v2_chr14_-_106610852_106610852	0.691998	PAX8	ENST00000390603.2|IGHV3-15|ENSG00000211943.2|immunoglobulin heavy variable 3-15
hg19_v2_chrX_+_151867214_151867284	0.691015	PAX8	ENST00000329342.5|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000412733.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000457643.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6
hg19_v2_chr5_-_18746250_18746285	0.685617	PAX8	ENST00000512978.1|CTD-2023M8.1|ENSG00000248693.1|CTD-2023M8.1
hg19_v2_chr2_+_90198535_90198535	0.669256	PAX8	ENST00000390276.2|IGKV1D-12|ENSG00000240834.1|immunoglobulin kappa variable 1D-12
hg19_v2_chr12_-_57873631_57873672	0.668125	PAX8	ENST00000393791.3|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000356411.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000552249.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr1_+_100817262_100817290	0.667729	PAX8	ENST00000455467.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr14_-_23288930_23289020	0.665971	PAX8	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr8_-_20040638_20040717	0.646108	PAX8	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chrY_-_13524717_13524717	0.642648	PAX8	ENST00000331172.6|SLC9B1P1|ENSG00000183704.6|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 pseudogene 1
hg19_v2_chr4_-_80329356_80329387	0.638336	PAX8	ENST00000358842.3|GK2|ENSG00000196475.4|glycerol kinase 2
hg19_v2_chr16_+_33006369_33006369	0.633794	PAX8	ENST00000425181.3|IGHV3OR16-10|ENSG00000233732.5|immunoglobulin heavy variable 3/OR16-10 (non-functional)
hg19_v2_chr19_-_39303576_39303591	0.632775	PAX8	ENST00000594209.1|LGALS4|ENSG00000171747.4|lectin, galactoside-binding, soluble, 4
hg19_v2_chrX_-_153141783_153141846	0.62962	PAX8	ENST00000458029.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr10_+_70847852_70847874	0.618806	PAX8	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr8_-_57233103_57233335	0.613633	PAX8	ENST00000303749.3|SDR16C5|ENSG00000170786.8|short chain dehydrogenase/reductase family 16C, member 5 	ENST00000522671.1|SDR16C5|ENSG00000170786.8|short chain dehydrogenase/reductase family 16C, member 5
hg19_v2_chr1_-_161600822_161600923	0.610097	PAX8	ENST00000534776.1|FCGR3B|ENSG00000162747.5|Fc fragment of IgG, low affinity IIIb, receptor (CD16b) 	ENST00000540048.1|FCGR3A|ENSG00000203747.5|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
hg19_v2_chr14_+_22931924_22931924	0.605971	PAX8	ENST00000390477.2|TRDC|ENSG00000211829.2|T cell receptor delta constant
hg19_v2_chr12_-_18890940_18890991	0.601927	PAX8	ENST00000543242.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000539072.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000541966.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000266505.7|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000447925.2|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000435379.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1
hg19_v2_chr12_-_123201337_123201439	0.601274	PAX8	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr12_-_123187890_123187911	0.595	PAX8	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr8_-_7673238_7673238	0.59197	PAX8	ENST00000335021.2|DEFB107A|ENSG00000186572.2|defensin, beta 107A
hg19_v2_chr2_+_90248739_90248739	0.58954	PAX8	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr4_+_71091786_71091797	0.584506	PAX8	ENST00000317987.5|FDCSP|ENSG00000181617.5|follicular dendritic cell secreted protein
hg19_v2_chr2_+_79252822_79252833	0.583324	PAX8	ENST00000272324.5|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr1_-_85156417_85156486	0.577503	PAX8	ENST00000422026.1|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr16_-_28518153_28518187	0.574589	PAX8	ENST00000356897.1|IL27|ENSG00000197272.2|interleukin 27
hg19_v2_chr22_-_37403839_37403855	0.57146	PAX8	ENST00000402860.3|TEX33|ENSG00000185264.7|testis expressed 33 	ENST00000381821.1|TEX33|ENSG00000185264.7|testis expressed 33
hg19_v2_chr6_+_41196077_41196088	0.559363	PAX8	ENST00000448827.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr22_-_37403858_37403896	0.557816	PAX8	ENST00000405091.2|TEX33|ENSG00000185264.7|testis expressed 33
hg19_v2_chr4_+_36283213_36283256	0.554393	PAX8	ENST00000357504.3|DTHD1|ENSG00000197057.4|death domain containing 1
hg19_v2_chr1_-_157522260_157522315	0.554303	PAX8	ENST00000368191.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000361835.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5
hg19_v2_chr8_-_21771182_21771208	0.551959	PAX8	ENST00000523932.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa 	ENST00000544659.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr4_-_46911223_46911230	0.548743	PAX8	ENST00000396533.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr2_+_79252804_79252815	0.548571	PAX8	ENST00000393897.2|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr6_+_41196052_41196063	0.540755	PAX8	ENST00000341495.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr16_-_20367584_20367628	0.537116	PAX8	ENST00000570689.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr22_+_23029188_23029205	0.534564	PAX8	ENST00000390305.2|IGLV3-25|ENSG00000211659.2|immunoglobulin lambda variable 3-25
hg19_v2_chr19_-_51538148_51538203	0.529805	PAX8	ENST00000319590.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12 	ENST00000250351.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr14_-_107114267_107114277	0.525833	PAX8	ENST00000454421.2|IGHV3-64|ENSG00000223648.2|immunoglobulin heavy variable 3-64
hg19_v2_chr1_-_223853425_223853436	0.520931	PAX8	ENST00000366873.2|CAPN8|ENSG00000203697.7|calpain 8 	ENST00000419193.2|CAPN8|ENSG00000203697.7|calpain 8
hg19_v2_chr19_+_17865011_17865123	0.515967	PAX8	ENST00000596462.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596865.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598960.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000539407.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr11_+_4510109_4510109	0.514543	PAX8	ENST00000307632.3|OR52K1|ENSG00000196778.2|olfactory receptor, family 52, subfamily K, member 1
hg19_v2_chr4_-_16077741_16077760	0.512722	PAX8	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr11_+_60739249_60739338	0.511859	PAX8	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr3_-_6847096_6847142	0.5089	PAX8	ENST00000454410.2|GRM7-AS3|ENSG00000226258.2|GRM7 antisense RNA 3 	ENST00000424366.1|GRM7-AS3|ENSG00000226258.2|GRM7 antisense RNA 3 	ENST00000417482.1|GRM7-AS3|ENSG00000226258.2|GRM7 antisense RNA 3 	ENST00000412629.1|GRM7-AS3|ENSG00000226258.2|GRM7 antisense RNA 3
hg19_v2_chr9_+_111624577_111624603	0.504202	PAX8	ENST00000333999.3|ACTL7A|ENSG00000187003.5|actin-like 7A
hg19_v2_chr1_-_16730469_16730469	0.494967	PAX8	ENST00000491418.1|SPATA21|ENSG00000187144.7|spermatogenesis associated 21
hg19_v2_chr1_+_182419261_182419285	0.494666	PAX8	ENST00000294854.8|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1 	ENST00000542961.1|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1
hg19_v2_chr5_-_156390230_156390266	0.494477	PAX8	ENST00000407087.3|TIMD4|ENSG00000145850.4|T-cell immunoglobulin and mucin domain containing 4 	ENST00000274532.2|TIMD4|ENSG00000145850.4|T-cell immunoglobulin and mucin domain containing 4
hg19_v2_chr6_+_135502408_135502459	0.493325	PAX8	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr1_-_173176452_173176477	0.488905	PAX8	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr14_+_23004404_23004502	0.484456	PAX8	ENST00000390528.1|TRAJ9|ENSG00000211880.1|T cell receptor alpha joining 9
hg19_v2_chr2_+_90192768_90192768	0.483239	PAX8	ENST00000390275.2|IGKV1D-13|ENSG00000211630.2|immunoglobulin kappa variable 1D-13
hg19_v2_chr6_+_43266063_43266097	0.482425	PAX8	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr2_-_79313973_79314059	0.474992	PAX8	ENST00000454188.1|REG1B|ENSG00000172023.3|regenerating islet-derived 1 beta
hg19_v2_chr8_-_121825088_121825094	0.472943	PAX8	ENST00000520717.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr19_+_35939154_35939203	0.472515	PAX8	ENST00000599180.2|FFAR2|ENSG00000126262.4|free fatty acid receptor 2
hg19_v2_chr20_+_2795626_2795657	0.471535	PAX8	ENST00000603872.1|C20orf141|ENSG00000258713.2|chromosome 20 open reading frame 141 	ENST00000380589.4|C20orf141|ENSG00000258713.2|chromosome 20 open reading frame 141
hg19_v2_chr3_-_128684488_128684488	0.463398	PAX8	ENST00000511204.1|RP11-723O4.6|ENSG00000187695.6|Uncharacterized protein FLJ43738
hg19_v2_chr12_-_21556577_21556599	0.458588	PAX8	ENST00000450590.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2 	ENST00000453443.1|SLCO1A2|ENSG00000084453.12|solute carrier organic anion transporter family, member 1A2
hg19_v2_chr7_-_15014398_15014409	0.450191	PAX8	ENST00000437998.1|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr17_+_38444115_38444194	0.449645	PAX8	ENST00000580824.1|CDC6|ENSG00000094804.5|cell division cycle 6 	ENST00000577249.1|CDC6|ENSG00000094804.5|cell division cycle 6
hg19_v2_chr6_+_142623758_142623795	0.449603	PAX8	ENST00000541199.1|GPR126|ENSG00000112414.10|G protein-coupled receptor 126 	ENST00000435011.2|GPR126|ENSG00000112414.10|G protein-coupled receptor 126
hg19_v2_chr11_-_104905840_104905977	0.439873	PAX8	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr19_-_51537982_51537997	0.437094	PAX8	ENST00000525263.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr16_+_63764128_63764181	0.431047	PAX8	ENST00000563061.1|RP11-370P15.2|ENSG00000261014.1|RP11-370P15.2
hg19_v2_chr6_+_117198400_117198441	0.427072	PAX8	ENST00000332958.2|RFX6|ENSG00000185002.5|regulatory factor X, 6
hg19_v2_chr1_+_186649754_186649787	0.4262	PAX8	ENST00000608917.1|RP5-973M2.2|ENSG00000273129.1|RP5-973M2.2
hg19_v2_chr4_+_75230853_75230871	0.424331	PAX8	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr6_-_32784687_32784839	0.423572	PAX8	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr22_+_22707260_22707289	0.415794	PAX8	ENST00000390293.1|IGLV5-48|ENSG00000211647.1|immunoglobulin lambda variable 5-48 (non-functional)
hg19_v2_chr7_-_144533074_144533153	0.408525	PAX8	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr22_+_27017921_27017928	0.408027	PAX8	ENST00000354760.3|CRYBA4|ENSG00000196431.3|crystallin, beta A4
hg19_v2_chr17_-_34257771_34257786	0.403412	PAX8	ENST00000394529.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000293273.6|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr1_+_100818156_100818210	0.398595	PAX8	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr3_+_164924716_164924750	0.397318	PAX8	ENST00000470138.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2	ENST00000498616.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2
hg19_v2_chrX_+_151883090_151883174	0.390339	PAX8	ENST00000370293.2|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000423993.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000447530.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000458057.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000331220.2|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000422085.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000453150.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000409560.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B
hg19_v2_chr4_-_145061788_145061904	0.389024	PAX8	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr3_+_190105909_190105966	0.388544	PAX8	ENST00000456423.1|CLDN16|ENSG00000113946.3|claudin 16
hg19_v2_chr3_+_125694347_125694467	0.387036	PAX8	ENST00000505382.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000511082.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr17_-_34257731_34257766	0.383125	PAX8	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr6_+_30130969_30131007	0.381383	PAX8	ENST00000376694.4|TRIM15|ENSG00000204610.8|tripartite motif containing 15
hg19_v2_chr2_+_98993751_98993751	0.377165	PAX8	ENST00000409937.1|CNGA3|ENSG00000144191.7|cyclic nucleotide gated channel alpha 3
hg19_v2_chr19_-_54804173_54804302	0.375155	PAX8	ENST00000391744.3|LILRA3|ENSG00000170866.7|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 	ENST00000251390.3|LILRA3|ENSG00000170866.7|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3
hg19_v2_chr9_-_116837249_116837318	0.374334	PAX8	ENST00000466610.2|AMBP|ENSG00000106927.7|alpha-1-microglobulin/bikunin precursor
hg19_v2_chr11_-_58343319_58343338	0.371329	PAX8	ENST00000395074.2|LPXN|ENSG00000110031.8|leupaxin
hg19_v2_chr3_-_150264272_150264428	0.366213	PAX8	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr1_-_198509804_198509865	0.364034	PAX8	ENST00000489986.1|ATP6V1G3|ENSG00000151418.7|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3 	ENST00000367382.1|ATP6V1G3|ENSG00000151418.7|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg19_v2_chr19_-_51538118_51538134	0.362174	PAX8	ENST00000529888.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chrX_-_152160740_152160774	0.359644	PAX8	ENST00000361887.5|PNMA5|ENSG00000198883.7|paraneoplastic Ma antigen family member 5 	ENST00000439251.1|PNMA5|ENSG00000198883.7|paraneoplastic Ma antigen family member 5 	ENST00000452693.1|PNMA5|ENSG00000198883.7|paraneoplastic Ma antigen family member 5
hg19_v2_chr6_-_9939552_9939552	0.357181	PAX8	ENST00000460363.2|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr13_+_31309645_31309726	0.356337	PAX8	ENST00000380490.3|ALOX5AP|ENSG00000132965.5|arachidonate 5-lipoxygenase-activating protein
hg19_v2_chr6_+_29274403_29274403	0.356049	PAX8	ENST00000377160.2|OR14J1|ENSG00000204695.2|olfactory receptor, family 14, subfamily J, member 1
hg19_v2_chr3_+_121796697_121796750	0.355726	PAX8	ENST00000482356.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000393627.2|CD86|ENSG00000114013.11|CD86 molecule
hg19_v2_chr3_+_186435137_186435158	0.353173	PAX8	ENST00000447445.1|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr2_-_234763147_234763212	0.352791	PAX8	ENST00000411486.2|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000432087.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000441687.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000414924.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein
hg19_v2_chr20_+_31547651_31547651	0.348069	PAX8	ENST00000457731.1|EFCAB8|ENSG00000215529.8|EF-hand calcium binding domain 8
hg19_v2_chrX_+_134887233_134887233	0.345002	PAX8	ENST00000443882.1|CT45A3|ENSG00000232417.5|cancer/testis antigen family 45, member A3
hg19_v2_chr19_-_6057282_6057313	0.344693	PAX8	ENST00000592281.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression)
hg19_v2_chr15_+_45028520_45028560	0.341972	PAX8	ENST00000329464.4|TRIM69|ENSG00000185880.8|tripartite motif containing 69
hg19_v2_chr7_+_12544025_12544073	0.338134	PAX8	ENST00000443874.1|AC005281.1|ENSG00000226690.2|AC005281.1	ENST00000424453.1|AC005281.1|ENSG00000226690.2|AC005281.1
hg19_v2_chr14_+_22962898_22962925	0.336721	PAX8	ENST00000390492.1|TRAJ45|ENSG00000211844.1|T cell receptor alpha joining 45
hg19_v2_chr7_+_150413645_150413709	0.332652	PAX8	ENST00000307194.5|GIMAP1|ENSG00000213203.2|GTPase, IMAP family member 1
hg19_v2_chr1_-_157522180_157522245	0.332106	PAX8	ENST00000356953.4|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000368188.2|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000368190.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000368189.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5
hg19_v2_chr3_-_111852128_111852152	0.331512	PAX8	ENST00000308910.4|GCSAM|ENSG00000174500.8|germinal center-associated, signaling and motility
hg19_v2_chr2_-_26864228_26864237	0.329904	PAX8	ENST00000288861.4|CIB4|ENSG00000157884.6|calcium and integrin binding family member 4
hg19_v2_chr20_+_2795609_2795620	0.329389	PAX8	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr12_-_6961050_6961230	0.327716	PAX8	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr8_+_31496809_31496902	0.323686	PAX8	ENST00000518104.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000519301.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr8_-_71157595_71157616	0.322791	PAX8	ENST00000519724.1|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chrX_+_55649833_55649833	0.316807	PAX8	ENST00000339140.3|FOXR2|ENSG00000189299.5|forkhead box R2
hg19_v2_chr6_-_138060103_138060120	0.313565	PAX8	ENST00000411615.1|RP11-356I2.1|ENSG00000234956.1|RP11-356I2.1	ENST00000419220.1|RP11-356I2.1|ENSG00000234956.1|RP11-356I2.1
hg19_v2_chr2_-_132589601_132589606	0.311561	PAX8	ENST00000437330.1|AC103564.7|ENSG00000229203.1|AC103564.7
hg19_v2_chr12_-_129308487_129308588	0.308524	PAX8	ENST00000266771.5|SLC15A4|ENSG00000139370.6|solute carrier family 15 (oligopeptide transporter), member 4
hg19_v2_chr6_+_14117872_14118012	0.306003	PAX8	ENST00000379153.3|CD83|ENSG00000112149.5|CD83 molecule
hg19_v2_chr11_+_64323156_64323165	0.305623	PAX8	ENST00000377585.3|SLC22A11|ENSG00000168065.11|solute carrier family 22 (organic anion/urate transporter), member 11
hg19_v2_chr12_-_53074182_53074197	0.305573	PAX8	ENST00000252244.3|KRT1|ENSG00000167768.4|keratin 1
hg19_v2_chr12_-_110883346_110883392	0.303242	PAX8	ENST00000547365.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr18_+_6511415_6511415	0.302599	PAX8	ENST00000584361.1|RP11-865B13.1|ENSG00000265944.1|chromosome 18 open reading frame 64
hg19_v2_chr16_-_86383240_86383289	0.29995	PAX8	ENST00000595169.1|LINC00917|ENSG00000168367.5|long intergenic non-protein coding RNA 917 	ENST00000598994.1|LINC00917|ENSG00000168367.5|long intergenic non-protein coding RNA 917 	ENST00000599619.1|LINC00917|ENSG00000168367.5|long intergenic non-protein coding RNA 917 	ENST00000599664.1|LINC00917|ENSG00000168367.5|long intergenic non-protein coding RNA 917
hg19_v2_chr10_+_96443378_96443430	0.299932	PAX8	ENST00000285979.6|CYP2C18|ENSG00000108242.8|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v2_chr12_-_57410304_57410325	0.298375	PAX8	ENST00000441881.1|TAC3|ENSG00000166863.7|tachykinin 3 	ENST00000458521.2|TAC3|ENSG00000166863.7|tachykinin 3
hg19_v2_chr14_+_58797974_58798011	0.297247	PAX8	ENST00000417477.2|ARID4A|ENSG00000032219.14|AT rich interactive domain 4A (RBP1-like)
hg19_v2_chr21_-_32410795_32410795	0.287217	PAX8	ENST00000382822.2|KRTAP19-8|ENSG00000206102.2|keratin associated protein 19-8
hg19_v2_chr1_+_180165672_180165817	0.284241	PAX8	ENST00000443059.1|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr13_+_24844979_24844994	0.283956	PAX8	ENST00000454083.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr12_+_75874460_75874549	0.283438	PAX8	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr12_-_89919965_89919978	0.282082	PAX8	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr8_+_27168988_27169021	0.281887	PAX8	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr6_-_51952367_51952416	0.276549	PAX8	ENST00000340994.4|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr16_-_87350970_87351006	0.275961	PAX8	ENST00000567970.1|C16orf95|ENSG00000260456.2|chromosome 16 open reading frame 95
hg19_v2_chrX_-_153141434_153141509	0.273916	PAX8	ENST00000407935.2|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000439496.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr13_-_103426112_103426164	0.269658	PAX8	ENST00000376032.4|TEX30|ENSG00000151287.12|testis expressed 30 	ENST00000376029.3|TEX30|ENSG00000151287.12|testis expressed 30
hg19_v2_chr17_-_39646116_39646164	0.267171	PAX8	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr22_-_31324215_31324215	0.262504	PAX8	ENST00000429468.1|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chrX_-_131228291_131228291	0.25699	PAX8	ENST00000370879.1|FRMD7|ENSG00000165694.5|FERM domain containing 7
hg19_v2_chr15_-_73925651_73925773	0.255395	PAX8	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr3_-_189840223_189840229	0.255051	PAX8	ENST00000427335.2|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chrX_+_23925918_23925918	0.254371	PAX8	ENST00000379211.3|CXorf58|ENSG00000165182.6|chromosome X open reading frame 58
hg19_v2_chr15_-_49255632_49255650	0.25291	PAX8	ENST00000332408.4|SHC4|ENSG00000185634.7|SHC (Src homology 2 domain containing) family, member 4
hg19_v2_chr11_+_9482512_9482534	0.252302	PAX8	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr14_+_101123580_101123695	0.251756	PAX8	ENST00000556697.1|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523 	ENST00000360899.2|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523 	ENST00000553623.1|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523
hg19_v2_chr13_+_51483814_51483935	0.250085	PAX8	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chrX_-_151903184_151903211	0.240751	PAX8	ENST00000357916.4|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12 	ENST00000393869.3|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12
hg19_v2_chr5_-_140027357_140027370	0.233897	PAX8	ENST00000252102.4|NDUFA2|ENSG00000131495.4|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa
hg19_v2_chr4_+_120860695_120860722	0.230914	PAX8	ENST00000505122.2|RP11-700N1.1|ENSG00000250392.2|RP11-700N1.1
hg19_v2_chr15_+_45021183_45021189	0.230711	PAX8	ENST00000559390.1|TRIM69|ENSG00000185880.8|tripartite motif containing 69
hg19_v2_chr12_-_6960407_6960464	0.229359	PAX8	ENST00000540683.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000229265.6|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000535406.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000422785.3|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr14_+_66578299_66578354	0.226055	PAX8	ENST00000554187.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000556662.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000556291.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000557723.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000557050.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1
hg19_v2_chr11_+_9482551_9482604	0.225046	PAX8	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr17_+_7462103_7462110	0.221498	PAX8	ENST00000396545.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr8_-_53322303_53322340	0.220646	PAX8	ENST00000276480.7|ST18|ENSG00000147488.7|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v2_chr1_+_40915725_40915808	0.21054	PAX8	ENST00000484445.1|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B 	ENST00000411995.2|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B 	ENST00000361584.3|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B
hg19_v2_chr20_-_1373682_1373709	0.203134	PAX8	ENST00000381724.3|FKBP1A|ENSG00000088832.10|FK506 binding protein 1A, 12kDa
hg19_v2_chr15_-_60683326_60683496	0.20038	PAX8	ENST00000559350.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560389.1|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr3_-_161090660_161090673	0.198315	PAX8	ENST00000359175.4|SPTSSB|ENSG00000196542.4|serine palmitoyltransferase, small subunit B
hg19_v2_chr11_+_67055986_67056054	0.195781	PAX8	ENST00000447274.2|ANKRD13D|ENSG00000172932.10|ankyrin repeat domain 13 family, member D
hg19_v2_chr1_+_203734296_203734318	0.193125	PAX8	ENST00000442561.2|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1 	ENST00000367217.5|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1
hg19_v2_chr1_+_159409512_159409512	0.187065	PAX8	ENST00000423932.3|OR10J1|ENSG00000196184.7|olfactory receptor, family 10, subfamily J, member 1
hg19_v2_chr10_+_47657581_47657581	0.183206	PAX8	ENST00000441923.2|ANTXRL|ENSG00000198250.8|anthrax toxin receptor-like
hg19_v2_chr8_-_19093121_19093187	0.179307	PAX8	ENST00000518417.1|RP11-1080G15.1|ENSG00000253557.1|RP11-1080G15.1
hg19_v2_chr16_+_66442411_66442461	0.176661	PAX8	ENST00000499966.1|LINC00920|ENSG00000246898.1|long intergenic non-protein coding RNA 920
hg19_v2_chr11_-_105010320_105010516	0.176365	PAX8	ENST00000532895.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18 	ENST00000530950.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18
hg19_v2_chr17_+_7461613_7461645	0.175631	PAX8	ENST00000438470.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000436057.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr8_+_59323823_59323947	0.175309	PAX8	ENST00000399598.2|UBXN2B|ENSG00000215114.3|UBX domain protein 2B
hg19_v2_chrX_+_17653413_17653413	0.175038	PAX8	ENST00000398097.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr13_+_49684445_49684517	0.174591	PAX8	ENST00000398316.3|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr3_+_194426277_194426326	0.171118	PAX8	ENST00000439479.1|AC106706.1|ENSG00000233987.1|AC106706.1
hg19_v2_chr10_+_127371798_127371862	0.170904	PAX8	ENST00000596068.1|RP11-383C5.3|ENSG00000228021.3|RP11-383C5.3	ENST00000607914.1|RP11-383C5.3|ENSG00000228021.3|RP11-383C5.3	ENST00000415305.2|RP11-383C5.3|ENSG00000228021.3|RP11-383C5.3	ENST00000449693.1|RP11-383C5.3|ENSG00000228021.3|RP11-383C5.3
hg19_v2_chr10_+_12391685_12391734	0.170863	PAX8	ENST00000378845.1|CAMK1D|ENSG00000183049.8|calcium/calmodulin-dependent protein kinase ID
hg19_v2_chr17_+_7461580_7461610	0.170618	PAX8	ENST00000483039.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000396542.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr17_-_73266616_73266702	0.167524	PAX8	ENST00000579194.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000581777.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr17_+_9745786_9745816	0.165947	PAX8	ENST00000304773.5|GLP2R|ENSG00000065325.8|glucagon-like peptide 2 receptor
hg19_v2_chr4_+_69681710_69681716	0.165525	PAX8	ENST00000265403.7|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10 	ENST00000458688.2|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10
hg19_v2_chr4_+_156680143_156680152	0.165133	PAX8	ENST00000505154.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr19_+_50169081_50169196	0.162721	PAX8	ENST00000246784.3|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr1_+_89990378_89990429	0.162608	PAX8	ENST00000449440.1|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B
hg19_v2_chr7_+_143657027_143657027	0.15977	PAX8	ENST00000392899.1|OR2F1|ENSG00000213215.1|olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
hg19_v2_chr17_-_44657017_44657088	0.159561	PAX8	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr12_+_127359345_127359367	0.155084	PAX8	ENST00000543451.1|RP11-983C2.3|ENSG00000256286.1|RP11-983C2.3
hg19_v2_chr12_-_10251576_10251599	0.148425	PAX8	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr22_-_50523688_50523719	0.147526	PAX8	ENST00000450140.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr13_-_99174252_99174307	0.147305	PAX8	ENST00000376547.3|STK24|ENSG00000102572.10|serine/threonine kinase 24
hg19_v2_chr11_+_65851443_65851457	0.147139	PAX8	ENST00000533756.1|PACS1|ENSG00000175115.7|phosphofurin acidic cluster sorting protein 1
hg19_v2_chr8_+_86851932_86851934	0.141129	PAX8	ENST00000517368.1|CTA-392E5.1|ENSG00000253154.1|CTA-392E5.1
hg19_v2_chr3_-_15540055_15540120	0.137401	PAX8	ENST00000605797.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000435459.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr14_+_22955216_22955216	0.137291	PAX8	ENST00000390486.1|TRAJ52|ENSG00000211838.1|T cell receptor alpha joining 52
hg19_v2_chr1_-_153514241_153514241	0.137017	PAX8	ENST00000368718.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5 	ENST00000359215.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr6_+_147527103_147527118	0.136945	PAX8	ENST00000179882.6|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr4_+_166128735_166128813	0.136827	PAX8	ENST00000226725.6|KLHL2|ENSG00000109466.9|kelch-like family member 2
hg19_v2_chr2_-_240982399_240982399	0.136261	PAX8	ENST00000408934.1|PRR21|ENSG00000221961.2|proline rich 21 	ENST00000486799.1|PRR21|ENSG00000221961.2|proline rich 21
hg19_v2_chr17_-_73267281_73267299	0.135686	PAX8	ENST00000578305.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000325102.8|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr11_-_1033062_1033209	0.135055	PAX8	ENST00000525923.1|MUC6|ENSG00000184956.11|mucin 6, oligomeric mucus/gel-forming
hg19_v2_chr15_+_81391740_81391757	0.134881	PAX8	ENST00000561216.1|C15orf26|ENSG00000156206.9|chromosome 15 open reading frame 26
hg19_v2_chr5_+_55147205_55147334	0.132873	PAX8	ENST00000396836.2|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000396834.1|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000447346.2|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000359040.5|IL31RA|ENSG00000164509.9|interleukin 31 receptor A
hg19_v2_chr1_-_248738080_248738080	0.129673	PAX8	ENST00000328782.2|OR2T34|ENSG00000183310.2|olfactory receptor, family 2, subfamily T, member 34
hg19_v2_chr9_-_98269481_98269691	0.127496	PAX8	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr2_-_128615517_128615523	0.126603	PAX8	ENST00000409698.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr19_+_9361606_9361606	0.12525	PAX8	ENST00000456448.1|OR7E24|ENSG00000237521.1|olfactory receptor, family 7, subfamily E, member 24
hg19_v2_chr17_-_1508379_1508458	0.12372	PAX8	ENST00000412517.3|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2
hg19_v2_chr18_+_43405471_43405485	0.122462	PAX8	ENST00000389474.3|SIGLEC15|ENSG00000197046.7|sialic acid binding Ig-like lectin 15
hg19_v2_chr19_-_50168962_50169062	0.122223	PAX8	ENST00000599223.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593922.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600022.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596765.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000599144.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596822.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598108.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601373.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000595034.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601291.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr14_+_22997487_22997487	0.12128	PAX8	ENST00000390521.1|TRAJ16|ENSG00000211873.1|T cell receptor alpha joining 16
hg19_v2_chr6_-_82462425_82462491	0.119189	PAX8	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr3_+_164924769_164924801	0.118569	PAX8	ENST00000494915.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2
hg19_v2_chr9_+_133046882_133046882	0.117418	PAX8	ENST00000415566.2|HMCN2|ENSG00000148357.12|hemicentin 2
hg19_v2_chr17_+_7462031_7462086	0.117341	PAX8	ENST00000380535.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr5_-_133510456_133510499	0.115848	PAX8	ENST00000520417.1|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr17_+_7461849_7461914	0.115609	PAX8	ENST00000338784.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr17_-_73267214_73267277	0.115405	PAX8	ENST00000580717.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000577542.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000579612.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000245551.5|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr9_-_128246769_128246780	0.112145	PAX8	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr16_-_30773372_30773449	0.111077	PAX8	ENST00000545825.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93 	ENST00000541260.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93
hg19_v2_chr2_-_77749387_77749405	0.110826	PAX8	ENST00000409884.1|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4
hg19_v2_chr12_+_113229962_113230003	0.110144	PAX8	ENST00000553114.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse) 	ENST00000548866.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr17_-_44439084_44439130	0.109753	PAX8	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr17_-_27278304_27278408	0.107972	PAX8	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr12_-_10251603_10251619	0.107268	PAX8	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr12_+_53689309_53689366	0.106941	PAX8	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr6_+_31126291_31126399	0.106763	PAX8	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr4_-_144826682_144826716	0.105025	PAX8	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr6_+_30131318_30131462	0.103242	PAX8	ENST00000376688.1|TRIM15|ENSG00000204610.8|tripartite motif containing 15
hg19_v2_chr17_-_73267304_73267328	0.102754	PAX8	ENST00000579297.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000580571.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr4_+_156680153_156680242	0.100995	PAX8	ENST00000502959.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000505764.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000507146.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000264424.8|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000503520.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr10_+_35484793_35484937	0.100561	PAX8	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr11_+_63742050_63742104	0.0999903	PAX8	ENST00000314133.3|COX8A|ENSG00000176340.3|cytochrome c oxidase subunit VIIIA (ubiquitous) 	ENST00000535431.1|AP000721.4|ENSG00000256100.1|Uncharacterized protein
hg19_v2_chr17_+_7461781_7461820	0.0994602	PAX8	ENST00000349228.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr4_-_75695366_75695366	0.0987099	PAX8	ENST00000512743.1|BTC|ENSG00000174808.7|betacellulin
hg19_v2_chrX_-_153141302_153141399	0.0977511	PAX8	ENST00000361699.4|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000543994.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000370057.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000538883.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000361981.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr17_+_5031687_5031687	0.0944526	PAX8	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr22_-_50523843_50523865	0.0919578	PAX8	ENST00000535444.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1 	ENST00000431262.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr5_+_69321074_69321200	0.091477	PAX8	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr6_+_160542870_160542968	0.0905225	PAX8	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr3_+_186435065_186435126	0.0901643	PAX8	ENST00000287611.2|KNG1|ENSG00000113889.7|kininogen 1 	ENST00000265023.4|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr10_-_43892668_43892794	0.0869492	PAX8	ENST00000544000.1|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr19_+_41856816_41856871	0.0865971	PAX8	ENST00000539627.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr1_+_155006300_155006446	0.0860639	PAX8	ENST00000295542.1|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000392480.1|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000423025.2|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000368419.2|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1
hg19_v2_chr20_+_58571419_58571449	0.0844157	PAX8	ENST00000244049.3|CDH26|ENSG00000124215.12|cadherin 26 	ENST00000350849.6|CDH26|ENSG00000124215.12|cadherin 26 	ENST00000456106.1|CDH26|ENSG00000124215.12|cadherin 26
hg19_v2_chr21_-_35883541_35883609	0.0824035	PAX8	ENST00000399284.1|KCNE1|ENSG00000180509.7|potassium voltage-gated channel, Isk-related family, member 1
hg19_v2_chr16_+_14564842_14564842	0.0811552	PAX8	ENST00000599734.1|AC092291.2|ENSG00000269049.1|AC092291.2
hg19_v2_chr19_-_55791431_55791508	0.0802472	PAX8	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr19_-_50169064_50169132	0.0797545	PAX8	ENST00000593337.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598808.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600453.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593818.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000597198.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601809.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000377139.3|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr17_+_6918093_6918139	0.0785833	PAX8	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chrX_-_23926004_23926072	0.0764851	PAX8	ENST00000379226.4|APOO|ENSG00000184831.9|apolipoprotein O 	ENST00000379220.3|APOO|ENSG00000184831.9|apolipoprotein O
hg19_v2_chr13_+_24844857_24844930	0.0756073	PAX8	ENST00000409126.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13 	ENST00000343003.6|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr7_+_80275663_80275678	0.0755489	PAX8	ENST00000413265.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr2_-_128615681_128615737	0.0752136	PAX8	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr17_+_80332153_80332153	0.0748405	PAX8	ENST00000313135.2|UTS2R|ENSG00000181408.2|urotensin 2 receptor
hg19_v2_chr14_-_106066376_106066546	0.0741299	PAX8	ENST00000412518.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000428654.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000427543.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000420153.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000577108.1|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon 	ENST00000576077.1|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr21_-_30047095_30047177	0.0740747	PAX8	ENST00000452028.1|AF131217.1|ENSG00000232855.2|AF131217.1	ENST00000433310.2|AF131217.1|ENSG00000232855.2|AF131217.1
hg19_v2_chrX_+_151903207_151903234	0.071999	PAX8	ENST00000370287.3|CSAG1|ENSG00000198930.8|chondrosarcoma associated gene 1
hg19_v2_chrY_+_20708557_20708606	0.0715454	PAX8	ENST00000307393.2|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1 	ENST00000309834.4|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1 	ENST00000382856.2|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1
hg19_v2_chr18_-_10748498_10748498	0.0695787	PAX8	ENST00000579949.1|PIEZO2|ENSG00000154864.7|piezo-type mechanosensitive ion channel component 2
hg19_v2_chr17_-_42100474_42100589	0.0685879	PAX8	ENST00000585950.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000592127.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000589334.1|TMEM101|ENSG00000091947.5|transmembrane protein 101
hg19_v2_chr2_+_171036635_171036673	0.0662892	PAX8	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr9_-_92020841_92020885	0.0643063	PAX8	ENST00000433650.1|SEMA4D|ENSG00000187764.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
hg19_v2_chr12_-_10251539_10251560	0.063688	PAX8	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr4_+_2800291_2800332	0.0626097	PAX8	ENST00000504294.1|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2
hg19_v2_chr2_+_120301997_120302038	0.0621197	PAX8	ENST00000602047.1|PCDP1|ENSG00000163075.8|Primary ciliary dyskinesia protein 1
hg19_v2_chr3_-_110612059_110612059	0.0579291	PAX8	ENST00000485473.1|RP11-553A10.1|ENSG00000206532.2|Uncharacterized protein
hg19_v2_chrX_+_129535937_129535994	0.0557377	PAX8	ENST00000305536.6|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2 	ENST00000370947.1|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2
hg19_v2_chr4_+_118955635_118955655	0.0552465	PAX8	ENST00000433996.2|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr9_+_125376948_125376948	0.0536055	PAX8	ENST00000297913.2|OR1Q1|ENSG00000165202.2|olfactory receptor, family 1, subfamily Q, member 1
hg19_v2_chr4_+_80748619_80748630	0.0535966	PAX8	ENST00000504263.1|PCAT4|ENSG00000251321.1|prostate cancer associated transcript 4 (non-protein coding)
hg19_v2_chr4_+_80748640_80748689	0.0530906	PAX8	ENST00000514836.1|PCAT4|ENSG00000251321.1|prostate cancer associated transcript 4 (non-protein coding)
hg19_v2_chr9_-_134955246_134955295	0.0490377	PAX8	ENST00000357028.2|MED27|ENSG00000160563.9|mediator complex subunit 27 	ENST00000474263.1|MED27|ENSG00000160563.9|mediator complex subunit 27 	ENST00000292035.5|MED27|ENSG00000160563.9|mediator complex subunit 27
hg19_v2_chr8_+_133787586_133787673	0.0474441	PAX8	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr2_+_38177575_38177612	0.0458521	PAX8	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr1_-_222763240_222763284	0.043626	PAX8	ENST00000352967.4|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000391882.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000543857.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
hg19_v2_chr1_-_52520828_52520888	0.042313	PAX8	ENST00000610127.1|TXNDC12|ENSG00000117862.7|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v2_chr3_-_107941230_107941417	0.0422757	PAX8	ENST00000264538.3|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr11_+_4615269_4615269	0.0409927	PAX8	ENST00000530443.2|OR52I1|ENSG00000232268.4|olfactory receptor, family 52, subfamily I, member 1
hg19_v2_chr1_+_207038699_207038699	0.0387076	PAX8	ENST00000367098.1|IL20|ENSG00000162891.6|interleukin 20
hg19_v2_chr15_-_72523924_72524164	0.0383966	PAX8	ENST00000566809.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle 	ENST00000567087.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle 	ENST00000569050.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle 	ENST00000568883.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle
hg19_v2_chr3_-_127842612_127842680	0.0360881	PAX8	ENST00000417360.1|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1 	ENST00000322623.5|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1
hg19_v2_chr19_+_16296191_16296266	0.0350831	PAX8	ENST00000589852.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000263384.7|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000588367.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000587351.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A
hg19_v2_chr11_+_67222818_67222829	0.0316111	PAX8	ENST00000325656.5|CABP4|ENSG00000175544.9|calcium binding protein 4
hg19_v2_chr5_-_117897751_117897812	0.0312635	PAX8	ENST00000515704.1|CTD-2281M20.1|ENSG00000250891.1|CTD-2281M20.1	ENST00000506769.1|CTD-2281M20.1|ENSG00000250891.1|CTD-2281M20.1
hg19_v2_chr6_+_151773583_151773677	0.0302845	PAX8	ENST00000545879.1|C6orf211|ENSG00000146476.6|chromosome 6 open reading frame 211
hg19_v2_chr6_+_8652370_8652515	0.0290421	PAX8	ENST00000503668.1|HULC|ENSG00000251164.1|hepatocellular carcinoma up-regulated long non-coding RNA
hg19_v2_chr1_+_161494036_161494036	0.0284647	PAX8	ENST00000309758.4|HSPA6|ENSG00000173110.6|heat shock 70kDa protein 6 (HSP70B')
hg19_v2_chr2_+_191334212_191334242	0.0271031	PAX8	ENST00000444317.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000535751.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr1_+_367640_367640	0.026484	PAX8	ENST00000426406.1|OR4F29|ENSG00000235249.1|olfactory receptor, family 4, subfamily F, member 29
hg19_v2_chr12_+_122516626_122516645	0.0259956	PAX8	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr1_+_13359819_13359819	0.0254342	PAX8	ENST00000376168.1|PRAMEF5|ENSG00000204502.2|PRAME family member 5
hg19_v2_chr19_+_50169216_50169285	0.0243757	PAX8	ENST00000594157.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000600947.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000598306.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr11_+_17281900_17281906	0.0239827	PAX8	ENST00000530527.1|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr11_+_82904746_82904832	0.0215514	PAX8	ENST00000393389.3|ANKRD42|ENSG00000137494.9|ankyrin repeat domain 42 	ENST00000528722.1|ANKRD42|ENSG00000137494.9|ankyrin repeat domain 42
hg19_v2_chr12_+_72058130_72058261	0.0204162	PAX8	ENST00000547843.1|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr2_+_161993465_161993481	0.0196638	PAX8	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr22_+_22556057_22556057	0.0191992	PAX8	ENST00000390286.2|IGLV11-55|ENSG00000211641.2|immunoglobulin lambda variable 11-55 (non-functional)
hg19_v2_chr4_-_69536346_69536371	0.0180986	PAX8	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr1_-_184006829_184006911	0.0176877	PAX8	ENST00000361927.4|COLGALT2|ENSG00000198756.6|collagen beta(1-O)galactosyltransferase 2
hg19_v2_chr6_+_167704798_167704811	0.0170023	PAX8	ENST00000230256.3|UNC93A|ENSG00000112494.5|unc-93 homolog A (C. elegans)
hg19_v2_chr21_-_44582378_44582401	0.0164376	PAX8	ENST00000433840.1|AP001631.10|ENSG00000228120.2|AP001631.10
hg19_v2_chr7_+_90012986_90013035	0.0131803	PAX8	ENST00000416322.1|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr6_+_72926145_72926245	0.0114084	PAX8	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr12_+_55725485_55725485	0.0110024	PAX8	ENST00000379667.1|OR6C3|ENSG00000205329.1|olfactory receptor, family 6, subfamily C, member 3
hg19_v2_chr19_-_55791563_55791749	0.0108072	PAX8	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr15_+_89631647_89631725	0.00982597	PAX8	ENST00000569550.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565066.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565973.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr1_-_86848760_86848879	0.0095047	PAX8	ENST00000460698.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr16_+_30772913_30773066	0.00912085	PAX8	ENST00000563909.1|RNF40|ENSG00000103549.17|ring finger protein 40, E3 ubiquitin protein ligase
hg19_v2_chr20_+_5931497_5931592	0.00905488	PAX8	ENST00000378886.2|MCM8|ENSG00000125885.9|minichromosome maintenance complex component 8 	ENST00000265187.4|MCM8|ENSG00000125885.9|minichromosome maintenance complex component 8
hg19_v2_chrY_-_20935572_20935621	0.00776526	PAX8	ENST00000382852.1|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2 	ENST00000344884.4|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2 	ENST00000304790.3|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2
hg19_v2_chr19_-_55791540_55791549	0.00773376	PAX8	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr13_-_95131923_95131944	0.00759277	PAX8	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr13_+_77526602_77526613	0.00737219	PAX8	ENST00000449753.1|IRG1|ENSG00000102794.5|immunoresponsive 1 homolog (mouse)
hg19_v2_chrX_-_71458802_71458897	0.00706198	PAX8	ENST00000373657.1|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like 	ENST00000334463.3|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg19_v2_chr1_+_15943995_15944014	0.00646938	PAX8	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr11_+_34592423_34592452	0.006426	PAX8	ENST00000527135.1|RP11-350D17.2|ENSG00000255427.1|RP11-350D17.2
hg19_v2_chr18_-_58040000_58040015	0.00636879	PAX8	ENST00000299766.3|MC4R|ENSG00000166603.3|melanocortin 4 receptor
hg19_v2_chr9_+_118950325_118950452	0.00597908	PAX8	ENST00000534838.1|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr6_-_52109335_52109335	0.00526996	PAX8	ENST00000336123.4|IL17F|ENSG00000112116.9|interleukin 17F
hg19_v2_chr14_-_75083313_75083360	0.00153941	PAX8	ENST00000556652.1|CTD-2207P18.2|ENSG00000258976.1|CTD-2207P18.2	ENST00000555313.1|CTD-2207P18.2|ENSG00000258976.1|CTD-2207P18.2
hg19_v2_chr3_+_11178779_11178942	0.000305987	PAX8	ENST00000438284.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr19_+_42041860_42041936	0.00016456	PAX8	ENST00000483481.2|AC006129.4|ENSG00000270164.1|AC006129.4	ENST00000494375.2|AC006129.4|ENSG00000270164.1|AC006129.4
hg19_v2_chr17_-_74023291_74023312	1.30865e-05	PAX8	ENST00000586740.1|EVPL|ENSG00000167880.3|envoplakin
