hg19_v2_chr16_+_12058961_12058966	7.95077	SOX1	ENST00000053243.1|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr16_+_12059050_12059079	6.85123	SOX1	ENST00000396495.3|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr14_+_22356029_22356043	3.85456	SOX1	ENST00000390437.2|TRAV12-2|ENSG00000211789.2|T cell receptor alpha variable 12-2
hg19_v2_chr14_-_25078864_25078905	3.79491	SOX1	ENST00000216338.4|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX) 	ENST00000557220.2|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX) 	ENST00000382548.4|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX)
hg19_v2_chr14_+_22689792_22689820	3.5365	SOX1	ENST00000390462.1|TRAV35|ENSG00000211814.1|T cell receptor alpha variable 35
hg19_v2_chr12_+_9980069_9980087	3.34819	SOX1	ENST00000354855.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000324214.4|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000279544.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr7_-_36634181_36634262	2.73014	SOX1	ENST00000538464.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr12_+_9980113_9980133	2.69005	SOX1	ENST00000537723.1|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr22_-_30662828_30662847	2.30887	SOX1	ENST00000403463.1|OSM|ENSG00000099985.3|oncostatin M 	ENST00000215781.2|OSM|ENSG00000099985.3|oncostatin M
hg19_v2_chr7_+_142000747_142000782	2.21642	SOX1	ENST00000455382.2|TRBV2|ENSG00000226660.2|T cell receptor beta variable 2
hg19_v2_chr12_-_7848364_7848378	2.19972	SOX1	ENST00000329913.3|GDF3|ENSG00000184344.3|growth differentiation factor 3
hg19_v2_chr16_+_12059091_12059207	2.13355	SOX1	ENST00000562385.1|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr6_-_130543958_130544105	1.98844	SOX1	ENST00000437477.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3 	ENST00000439090.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3
hg19_v2_chr7_-_142176790_142176842	1.86544	SOX1	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4 (gene/pseudogene)
hg19_v2_chr18_-_67629015_67629039	1.75738	SOX1	ENST00000579496.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr14_+_22508822_22508847	1.7129	SOX1	ENST00000390448.3|TRAV20|ENSG00000211800.3|T cell receptor alpha variable 20
hg19_v2_chr4_-_48116540_48116569	1.62039	SOX1	ENST00000506073.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr14_+_22970526_22970585	1.61993	SOX1	ENST00000390498.1|TRAJ39|ENSG00000211850.1|T cell receptor alpha joining 39
hg19_v2_chr11_-_47400032_47400043	1.61279	SOX1	ENST00000533968.1|SPI1|ENSG00000066336.7|spleen focus forming virus (SFFV) proviral integration oncogene
hg19_v2_chr9_-_13432977_13433052	1.60468	SOX1	ENST00000605459.1|RP11-536O18.2|ENSG00000270547.1|RP11-536O18.2
hg19_v2_chr14_+_23009190_23009190	1.56975	SOX1	ENST00000390532.1|TRAJ5|ENSG00000211884.1|T cell receptor alpha joining 5
hg19_v2_chr11_-_47399942_47399961	1.5525	SOX1	ENST00000227163.4|SPI1|ENSG00000066336.7|spleen focus forming virus (SFFV) proviral integration oncogene
hg19_v2_chr11_-_47400078_47400127	1.49943	SOX1	ENST00000378538.3|SPI1|ENSG00000066336.7|spleen focus forming virus (SFFV) proviral integration oncogene
hg19_v2_chr11_-_47400062_47400077	1.45772	SOX1	ENST00000533030.1|SPI1|ENSG00000066336.7|spleen focus forming virus (SFFV) proviral integration oncogene
hg19_v2_chr12_-_10607084_10607284	1.4303	SOX1	ENST00000408006.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000544822.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000536188.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr2_+_87808725_87808733	1.41395	SOX1	ENST00000413202.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr7_-_139756791_139756791	1.33815	SOX1	ENST00000489809.1|PARP12|ENSG00000059378.8|poly (ADP-ribose) polymerase family, member 12
hg19_v2_chr4_+_154622652_154622652	1.31591	SOX1	ENST00000260010.6|TLR2|ENSG00000137462.6|toll-like receptor 2
hg19_v2_chr17_+_34391625_34391640	1.3124	SOX1	ENST00000004921.3|CCL18|ENSG00000006074.4|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)
hg19_v2_chr19_+_55385682_55385717	1.21989	SOX1	ENST00000391726.3|FCAR|ENSG00000186431.14|Fc fragment of IgA, receptor for
hg19_v2_chr1_+_174769006_174769070	1.21035	SOX1	ENST00000489615.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr12_+_75874460_75874549	1.1427	SOX1	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr3_-_107596910_107596940	1.09418	SOX1	ENST00000464359.2|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000464823.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000466155.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000473528.2|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608306.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000488852.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608137.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000608307.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000609429.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000601385.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000475362.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000600240.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635 	ENST00000600749.1|LINC00635|ENSG00000241469.3|long intergenic non-protein coding RNA 635
hg19_v2_chr14_+_21249200_21249248	1.08862	SOX1	ENST00000304677.2|RNASE6|ENSG00000169413.2|ribonuclease, RNase A family, k6
hg19_v2_chr8_+_53207015_53207045	1.07772	SOX1	ENST00000522228.1|RP11-1023P17.2|ENSG00000253924.1|RP11-1023P17.2
hg19_v2_chr11_-_104827425_104827425	1.0752	SOX1	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr18_-_56985776_56985815	1.06191	SOX1	ENST00000587244.1|CPLX4|ENSG00000166569.4|complexin 4
hg19_v2_chr14_+_38033252_38033405	1.01541	SOX1	ENST00000554829.1|RP11-356O9.1|ENSG00000258414.1|RP11-356O9.1
hg19_v2_chr6_+_130742231_130742252	0.993504	SOX1	ENST00000545622.1|TMEM200A|ENSG00000164484.7|transmembrane protein 200A
hg19_v2_chr5_+_135383008_135383107	0.953096	SOX1	ENST00000508767.1|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa 	ENST00000604555.1|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa
hg19_v2_chr2_+_24232918_24232970	0.93124	SOX1	ENST00000406420.3|MFSD2B|ENSG00000205639.5|major facilitator superfamily domain containing 2B 	ENST00000338315.4|MFSD2B|ENSG00000205639.5|major facilitator superfamily domain containing 2B
hg19_v2_chr9_-_123638633_123638711	0.921677	SOX1	ENST00000456291.1|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr12_+_93096619_93096750	0.814855	SOX1	ENST00000397833.3|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr13_+_49280951_49280951	0.778274	SOX1	ENST00000282018.3|CYSLTR2|ENSG00000152207.3|cysteinyl leukotriene receptor 2
hg19_v2_chr12_-_10151773_10151899	0.739245	SOX1	ENST00000298527.6|CLEC1B|ENSG00000165682.10|C-type lectin domain family 1, member B 	ENST00000348658.4|CLEC1B|ENSG00000165682.10|C-type lectin domain family 1, member B
hg19_v2_chr12_-_10605929_10605982	0.699496	SOX1	ENST00000347831.5|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000359151.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr17_-_29624343_29624429	0.695819	SOX1	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr14_-_89878369_89878496	0.683713	SOX1	ENST00000553840.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000556916.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr17_-_39646116_39646164	0.676802	SOX1	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr2_+_102615416_102615459	0.672629	SOX1	ENST00000393414.2|IL1R2|ENSG00000115590.9|interleukin 1 receptor, type II
hg19_v2_chr12_-_110434096_110434139	0.662456	SOX1	ENST00000320063.9|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000457474.2|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000547815.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000361006.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr1_-_86848760_86848879	0.66086	SOX1	ENST00000460698.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr4_-_122686261_122686340	0.635493	SOX1	ENST00000337677.5|TMEM155|ENSG00000164112.8|transmembrane protein 155
hg19_v2_chr5_-_54988559_54988576	0.619379	SOX1	ENST00000502247.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9
hg19_v2_chr11_-_111649015_111649030	0.615572	SOX1	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr11_-_6790286_6790286	0.61545	SOX1	ENST00000338569.2|OR2AG2|ENSG00000188124.2|olfactory receptor, family 2, subfamily AG, member 2
hg19_v2_chr11_-_123756334_123756379	0.606638	SOX1	ENST00000528595.1|TMEM225|ENSG00000204300.2|transmembrane protein 225 	ENST00000375026.2|TMEM225|ENSG00000204300.2|transmembrane protein 225
hg19_v2_chr10_-_45803286_45803286	0.600295	SOX1	ENST00000536058.1|OR13A1|ENSG00000256574.2|olfactory receptor, family 13, subfamily A, member 1
hg19_v2_chr19_+_21324863_21324880	0.599781	SOX1	ENST00000598331.1|ZNF431|ENSG00000196705.4|zinc finger protein 431
hg19_v2_chr11_-_78052923_78052949	0.577475	SOX1	ENST00000340149.2|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2
hg19_v2_chr17_+_75181292_75181298	0.573937	SOX1	ENST00000431431.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr19_-_6057282_6057313	0.571851	SOX1	ENST00000592281.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression)
hg19_v2_chr1_-_52499443_52499499	0.543551	SOX1	ENST00000371614.1|KTI12|ENSG00000198841.3|KTI12 homolog, chromatin associated (S. cerevisiae)
hg19_v2_chr21_-_16126181_16126192	0.52695	SOX1	ENST00000455253.2|AF127936.3|ENSG00000232884.3|AF127936.3
hg19_v2_chr1_-_200379129_200379174	0.511909	SOX1	ENST00000367353.1|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr7_-_76955563_76955591	0.507994	SOX1	ENST00000441833.2|GSAP|ENSG00000186088.11|gamma-secretase activating protein
hg19_v2_chr12_+_57810198_57810198	0.506629	SOX1	ENST00000598001.1|AC126614.1|ENSG00000268367.1|HCG1818482; Uncharacterized protein
hg19_v2_chr17_+_74729060_74729060	0.504594	SOX1	ENST00000587459.1|RP11-318A15.7|ENSG00000267168.1|Uncharacterized protein
hg19_v2_chr14_+_22951993_22951993	0.503467	SOX1	ENST00000390485.1|TRAJ53|ENSG00000211837.1|T cell receptor alpha joining 53
hg19_v2_chr1_+_144811943_144811943	0.488488	SOX1	ENST00000281815.8|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9
hg19_v2_chr14_+_62164340_62164443	0.464636	SOX1	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr8_-_49533521_49533578	0.463253	SOX1	ENST00000523038.1|RP11-567J20.1|ENSG00000253702.1|RP11-567J20.1
hg19_v2_chr11_+_125496619_125496646	0.458678	SOX1	ENST00000532669.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000278916.3|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr7_-_105029812_105029860	0.436871	SOX1	ENST00000482897.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr7_+_36450169_36450224	0.435704	SOX1	ENST00000428612.1|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr11_+_125496400_125496464	0.429752	SOX1	ENST00000524737.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr1_+_148560843_148560990	0.41927	SOX1	ENST00000442702.2|NBPF15|ENSG00000243452.3|neuroblastoma breakpoint family, member 15 	ENST00000369187.3|NBPF15|ENSG00000243452.3|neuroblastoma breakpoint family, member 15
hg19_v2_chr6_-_15548591_15548607	0.406054	SOX1	ENST00000509674.1|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr22_-_17302589_17302589	0.369281	SOX1	ENST00000331428.5|XKR3|ENSG00000172967.7|XK, Kell blood group complex subunit-related family, member 3
hg19_v2_chr10_-_45802907_45802907	0.361009	SOX1	ENST00000374401.2|OR13A1|ENSG00000256574.2|olfactory receptor, family 13, subfamily A, member 1
hg19_v2_chr1_-_112106556_112106570	0.357656	SOX1	ENST00000443498.1|ADORA3|ENSG00000121933.13|adenosine A3 receptor
hg19_v2_chr4_-_74486109_74486166	0.33785	SOX1	ENST00000395777.2|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr20_+_31805131_31805166	0.336064	SOX1	ENST00000375454.3|BPIFA3|ENSG00000131059.7|BPI fold containing family A, member 3 	ENST00000375452.3|BPIFA3|ENSG00000131059.7|BPI fold containing family A, member 3
hg19_v2_chr10_+_15085895_15085914	0.330887	SOX1	ENST00000378228.3|OLAH|ENSG00000152463.10|oleoyl-ACP hydrolase
hg19_v2_chr5_-_60411762_60411762	0.314521	SOX1	ENST00000594278.1|AC008498.1|ENSG00000269267.1|AC008498.1
hg19_v2_chr9_-_107299137_107299137	0.308695	SOX1	ENST00000374781.2|OR13C3|ENSG00000204246.2|olfactory receptor, family 13, subfamily C, member 3
hg19_v2_chr17_-_38821373_38821440	0.304408	SOX1	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr18_+_21719018_21719061	0.302173	SOX1	ENST00000585037.1|CABYR|ENSG00000154040.16|calcium binding tyrosine-(Y)-phosphorylation regulated 	ENST00000415309.2|CABYR|ENSG00000154040.16|calcium binding tyrosine-(Y)-phosphorylation regulated 	ENST00000399481.2|CABYR|ENSG00000154040.16|calcium binding tyrosine-(Y)-phosphorylation regulated 	ENST00000577705.1|CABYR|ENSG00000154040.16|calcium binding tyrosine-(Y)-phosphorylation regulated 	ENST00000327201.6|CABYR|ENSG00000154040.16|calcium binding tyrosine-(Y)-phosphorylation regulated
hg19_v2_chr1_+_206516200_206516200	0.296879	SOX1	ENST00000295713.5|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr12_-_127174845_127174868	0.293677	SOX1	ENST00000540814.1|RP11-407A16.3|ENSG00000256732.1|RP11-407A16.3	ENST00000541065.1|RP11-407A16.3|ENSG00000256732.1|RP11-407A16.3	ENST00000541769.1|RP11-407A16.4|ENSG00000255944.1|RP11-407A16.4
hg19_v2_chr7_-_110174754_110174811	0.289349	SOX1	ENST00000435466.1|AC003088.1|ENSG00000226965.1|AC003088.1
hg19_v2_chr19_+_35842445_35842445	0.277019	SOX1	ENST00000246553.2|FFAR1|ENSG00000126266.2|free fatty acid receptor 1
hg19_v2_chr19_+_17830051_17830317	0.274767	SOX1	ENST00000594625.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000324096.4|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000600186.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000597735.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S
hg19_v2_chr12_+_55248289_55248321	0.264749	SOX1	ENST00000308796.6|MUCL1|ENSG00000172551.6|mucin-like 1
hg19_v2_chr11_-_5255861_5255888	0.26474	SOX1	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr19_+_49588690_49588720	0.260449	SOX1	ENST00000221448.5|SNRNP70|ENSG00000104852.10|small nuclear ribonucleoprotein 70kDa (U1)
hg19_v2_chr5_+_147698550_147698550	0.260055	SOX1	ENST00000597116.1|AC091948.1|ENSG00000268126.1|Uncharacterized protein
hg19_v2_chr17_+_33448593_33448602	0.256404	SOX1	ENST00000158009.5|FNDC8|ENSG00000073598.5|fibronectin type III domain containing 8
hg19_v2_chr1_-_200379180_200379191	0.250699	SOX1	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr11_-_112131312_112131312	0.247243	SOX1	ENST00000527122.1|C11orf34|ENSG00000188771.3|placenta expressed transcript 1
hg19_v2_chr4_-_74486347_74486348	0.243355	SOX1	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr3_-_16524357_16524377	0.236294	SOX1	ENST00000432519.1|RFTN1|ENSG00000131378.9|raftlin, lipid raft linker 1
hg19_v2_chr15_+_42565393_42565455	0.235373	SOX1	ENST00000561871.1|GANC|ENSG00000214013.5|glucosidase, alpha; neutral C
hg19_v2_chr1_-_112106578_112106599	0.231123	SOX1	ENST00000369717.4|ADORA3|ENSG00000121933.13|adenosine A3 receptor
hg19_v2_chr3_+_136676707_136676810	0.230744	SOX1	ENST00000329582.4|IL20RB|ENSG00000174564.8|interleukin 20 receptor beta
hg19_v2_chrX_-_115594160_115594172	0.219759	SOX1	ENST00000371894.4|CXorf61|ENSG00000204019.4|cancer/testis antigen 83
hg19_v2_chr12_-_110434183_110434194	0.219181	SOX1	ENST00000360185.4|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000354574.4|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000338373.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000343646.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000356259.4|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000553118.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chrX_-_11129229_11129273	0.219135	SOX1	ENST00000608176.1|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1	ENST00000433747.2|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1	ENST00000608576.1|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1	ENST00000608916.1|RP11-120D5.1|ENSG00000234129.3|RP11-120D5.1
hg19_v2_chr19_+_49588677_49588688	0.209628	SOX1	ENST00000598984.1|SNRNP70|ENSG00000104852.10|small nuclear ribonucleoprotein 70kDa (U1) 	ENST00000598441.1|SNRNP70|ENSG00000104852.10|small nuclear ribonucleoprotein 70kDa (U1)
hg19_v2_chr18_-_51751132_51751158	0.203554	SOX1	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr8_-_86290333_86290348	0.195931	SOX1	ENST00000521846.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000523022.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000524324.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000519991.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000520663.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517590.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522579.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522814.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522662.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000523858.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000519129.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr3_+_136676851_136676864	0.194083	SOX1	ENST00000309741.5|IL20RB|ENSG00000174564.8|interleukin 20 receptor beta
hg19_v2_chr12_+_7456880_7456880	0.191352	SOX1	ENST00000399422.4|ACSM4|ENSG00000215009.5|acyl-CoA synthetase medium-chain family member 4
hg19_v2_chr2_+_234296792_234296806	0.187454	SOX1	ENST00000409813.3|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa
hg19_v2_chr1_-_200379104_200379128	0.175636	SOX1	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr19_+_21324827_21324855	0.175498	SOX1	ENST00000600692.1|ZNF431|ENSG00000196705.4|zinc finger protein 431 	ENST00000599296.1|ZNF431|ENSG00000196705.4|zinc finger protein 431 	ENST00000594425.1|ZNF431|ENSG00000196705.4|zinc finger protein 431 	ENST00000311048.7|ZNF431|ENSG00000196705.4|zinc finger protein 431
hg19_v2_chr20_+_49575342_49575391	0.172084	SOX1	ENST00000244051.1|MOCS3|ENSG00000124217.3|molybdenum cofactor synthesis 3
hg19_v2_chr16_-_18937072_18937072	0.167872	SOX1	ENST00000569122.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr11_-_5255696_5255724	0.161869	SOX1	ENST00000292901.3|HBD|ENSG00000223609.3|hemoglobin, delta 	ENST00000417377.1|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr14_+_22951276_22951276	0.160247	SOX1	ENST00000390484.1|TRAJ54|ENSG00000211836.1|T cell receptor alpha joining 54
hg19_v2_chr19_-_10491234_10491352	0.15357	SOX1	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr12_-_65146636_65146651	0.145775	SOX1	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr11_+_125496124_125496344	0.144587	SOX1	ENST00000533778.2|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000534070.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr11_-_112131583_112131583	0.13542	SOX1	ENST00000338832.2|C11orf34|ENSG00000188771.3|placenta expressed transcript 1
hg19_v2_chr4_-_74486217_74486273	0.133294	SOX1	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr1_-_74949033_74949033	0.127578	SOX1	ENST00000416014.2|LRRC53|ENSG00000162621.5|leucine rich repeat containing 53
hg19_v2_chr1_+_12806141_12806199	0.127328	SOX1	ENST00000288048.5|C1orf158|ENSG00000157330.5|chromosome 1 open reading frame 158
hg19_v2_chr6_+_149539767_149539834	0.126265	SOX1	ENST00000606202.1|TAB2|ENSG00000055208.13|TGF-beta activated kinase 1/MAP3K7 binding protein 2 	ENST00000536230.1|TAB2|ENSG00000055208.13|TGF-beta activated kinase 1/MAP3K7 binding protein 2 	ENST00000445901.1|RP1-111D6.3|ENSG00000228408.1|RP1-111D6.3
hg19_v2_chr3_-_44519131_44519186	0.124897	SOX1	ENST00000425708.2|ZNF445|ENSG00000185219.11|zinc finger protein 445 	ENST00000396077.2|ZNF445|ENSG00000185219.11|zinc finger protein 445
hg19_v2_chr8_-_102181718_102181857	0.124701	SOX1	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
hg19_v2_chr10_+_47894572_47894572	0.113197	SOX1	ENST00000355876.5|FAM21B|ENSG00000152726.14|family with sequence similarity 21, member B
hg19_v2_chr2_+_171036635_171036673	0.109438	SOX1	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr2_+_171034646_171034706	0.101557	SOX1	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr19_+_3762703_3762719	0.100975	SOX1	ENST00000589174.1|MRPL54|ENSG00000183617.4|mitochondrial ribosomal protein L54
hg19_v2_chrX_+_129040122_129040174	0.0967622	SOX1	ENST00000394422.3|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 	ENST00000371051.5|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr19_-_10491130_10491220	0.0967432	SOX1	ENST00000530829.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000529370.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr11_+_55029628_55029658	0.096253	SOX1	ENST00000417545.2|TRIM48|ENSG00000150244.8|tripartite motif containing 48
hg19_v2_chr11_-_18062872_18062872	0.0909909	SOX1	ENST00000250018.2|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr14_+_62462541_62462541	0.0888038	SOX1	ENST00000430451.2|SYT16|ENSG00000139973.11|synaptotagmin XVI
hg19_v2_chr13_+_109248500_109248524	0.0852376	SOX1	ENST00000356711.2|MYO16|ENSG00000041515.11|myosin XVI
hg19_v2_chr21_-_23058648_23058654	0.0838635	SOX1	ENST00000416182.1|AF241725.6|ENSG00000237527.1|AF241725.6
hg19_v2_chr15_+_57540230_57540239	0.0617991	SOX1	ENST00000559703.1|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr1_+_202789394_202789394	0.0396542	SOX1	ENST00000330493.5|RP11-480I12.4|ENSG00000184774.6|Putative inactive alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515
hg19_v2_chr8_+_137059264_137059348	0.0351148	SOX1	ENST00000502901.2|RP11-149P24.1|ENSG00000253248.1|RP11-149P24.1	ENST00000523150.1|RP11-149P24.1|ENSG00000253248.1|RP11-149P24.1
hg19_v2_chr11_-_57177586_57177586	0.0293305	SOX1	ENST00000529411.1|RP11-872D17.8|ENSG00000254979.1|Uncharacterized protein
hg19_v2_chr1_+_24646263_24646304	0.0270221	SOX1	ENST00000524724.1|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr1_+_184020811_184020826	0.0207095	SOX1	ENST00000361641.1|TSEN15|ENSG00000198860.7|TSEN15 tRNA splicing endonuclease subunit
hg19_v2_chr5_+_158654712_158654727	0.0191543	SOX1	ENST00000520323.1|CTB-11I22.2|ENSG00000253315.1|CTB-11I22.2
hg19_v2_chr16_-_52107814_52107814	0.0178584	SOX1	ENST00000562818.1|C16orf97|ENSG00000261190.1|chromosome 16 open reading frame 97
hg19_v2_chr3_+_132316081_132316102	0.016405	SOX1	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr4_+_156680153_156680242	0.00278077	SOX1	ENST00000502959.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000505764.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000507146.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000264424.8|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000503520.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
