hg19_v2_chr20_+_48807351_48807384	1.23059	UAAUGCU	ENST00000303004.3|CEBPB|ENSG00000172216.4|CCAAT/enhancer binding protein (C/EBP), beta
hg19_v2_chr20_+_31595406_31595426	0.822676	UAAUGCU	ENST00000170150.3|BPIFB2|ENSG00000078898.6|BPI fold containing family B, member 2
hg19_v2_chr7_-_3083573_3083584	0.815094	UAAUGCU	ENST00000396946.4|CARD11|ENSG00000198286.5|caspase recruitment domain family, member 11
hg19_v2_chr7_-_139876812_139876860	0.753437	UAAUGCU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr7_-_155604967_155605105	0.735234	UAAUGCU	ENST00000297261.2|SHH|ENSG00000164690.3|sonic hedgehog
hg19_v2_chr19_+_1941117_1941200	0.724187	UAAUGCU	ENST00000255641.8|CSNK1G2|ENSG00000133275.11|casein kinase 1, gamma 2
hg19_v2_chr17_-_13505219_13505299	0.71117	UAAUGCU	ENST00000284110.1|HS3ST3A1|ENSG00000153976.2|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg19_v2_chr21_+_30671189_30671207	0.706897	UAAUGCU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr9_+_5450503_5450551	0.653907	UAAUGCU	ENST00000381573.4|CD274|ENSG00000120217.9|CD274 molecule 	ENST00000381577.3|CD274|ENSG00000120217.9|CD274 molecule
hg19_v2_chr9_+_116638562_116638606	0.605921	UAAUGCU	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr11_+_119076745_119076792	0.58843	UAAUGCU	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr11_-_58980342_58980431	0.543498	UAAUGCU	ENST00000361050.3|MPEG1|ENSG00000197629.5|macrophage expressed 1
hg19_v2_chr14_+_103058948_103059005	0.537915	UAAUGCU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr10_+_8096631_8096660	0.531088	UAAUGCU	ENST00000379328.3|GATA3|ENSG00000107485.11|GATA binding protein 3
hg19_v2_chr16_-_11350036_11350067	0.513043	UAAUGCU	ENST00000332029.2|SOCS1|ENSG00000185338.4|suppressor of cytokine signaling 1
hg19_v2_chr5_+_156607829_156607946	0.485566	UAAUGCU	ENST00000422843.3|ITK|ENSG00000113263.8|IL2-inducible T-cell kinase
hg19_v2_chr11_-_64901978_64902009	0.465787	UAAUGCU	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr20_-_39317868_39317884	0.44901	UAAUGCU	ENST00000373313.2|MAFB|ENSG00000204103.2|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
hg19_v2_chr22_+_37309662_37309694	0.429368	UAAUGCU	ENST00000403662.3|CSF2RB|ENSG00000100368.9|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) 	ENST00000262825.5|CSF2RB|ENSG00000100368.9|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)
hg19_v2_chr6_+_15246501_15246527	0.427228	UAAUGCU	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chrX_-_129244655_129244697	0.418758	UAAUGCU	ENST00000335997.7|ELF4|ENSG00000102034.12|E74-like factor 4 (ets domain transcription factor)
hg19_v2_chr10_+_101419187_101419313	0.416189	UAAUGCU	ENST00000370489.4|ENTPD7|ENSG00000198018.6|ectonucleoside triphosphate diphosphohydrolase 7
hg19_v2_chrX_-_80065146_80065250	0.393536	UAAUGCU	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr4_-_140477928_140477990	0.375251	UAAUGCU	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr8_-_95961578_95961639	0.374725	UAAUGCU	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr8_+_56014949_56015048	0.371109	UAAUGCU	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr1_-_23857698_23857733	0.364967	UAAUGCU	ENST00000361729.2|E2F2|ENSG00000007968.6|E2F transcription factor 2
hg19_v2_chr15_+_67813406_67813492	0.339957	UAAUGCU	ENST00000342683.4|C15orf61|ENSG00000189227.4|chromosome 15 open reading frame 61
hg19_v2_chr2_+_28615669_28615733	0.33332	UAAUGCU	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr2_-_64881018_64881064	0.333136	UAAUGCU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr11_-_128392085_128392232	0.333036	UAAUGCU	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr6_+_135502466_135502489	0.325672	UAAUGCU	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr3_-_113465065_113465147	0.316552	UAAUGCU	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr1_-_234745234_234745283	0.306083	UAAUGCU	ENST00000366610.3|IRF2BP2|ENSG00000168264.6|interferon regulatory factor 2 binding protein 2 	ENST00000366609.3|IRF2BP2|ENSG00000168264.6|interferon regulatory factor 2 binding protein 2
hg19_v2_chr4_+_38665810_38665827	0.305094	UAAUGCU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr2_-_64371546_64371588	0.29115	UAAUGCU	ENST00000358912.4|PELI1|ENSG00000197329.7|pellino E3 ubiquitin protein ligase 1
hg19_v2_chr10_+_98741041_98741041	0.289333	UAAUGCU	ENST00000286067.2|C10orf12|ENSG00000155640.5|chromosome 10 open reading frame 12
hg19_v2_chrX_+_107069063_107069123	0.288302	UAAUGCU	ENST00000262843.6|MID2|ENSG00000080561.9|midline 2
hg19_v2_chr15_-_61521495_61521518	0.279973	UAAUGCU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr10_-_91403625_91403649	0.278133	UAAUGCU	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr17_-_62207485_62207511	0.27135	UAAUGCU	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chr19_+_1249869_1249894	0.260674	UAAUGCU	ENST00000591446.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr5_+_151151471_151151496	0.260193	UAAUGCU	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr1_-_157108130_157108173	0.257802	UAAUGCU	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr7_+_4721885_4721945	0.25763	UAAUGCU	ENST00000328914.4|FOXK1|ENSG00000164916.9|forkhead box K1
hg19_v2_chr8_-_57123815_57123867	0.254858	UAAUGCU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr6_+_108881012_108881038	0.252547	UAAUGCU	ENST00000343882.6|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chrX_-_20284958_20285039	0.249736	UAAUGCU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr10_-_120514720_120514758	0.249412	UAAUGCU	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr2_+_208394616_208394655	0.245708	UAAUGCU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr17_+_55333876_55333939	0.24388	UAAUGCU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr11_+_47279504_47279563	0.24363	UAAUGCU	ENST00000441012.2|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000437276.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000436029.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000467728.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000405853.3|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3
hg19_v2_chr17_-_27621125_27621143	0.240351	UAAUGCU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr19_-_31840438_31840470	0.232589	UAAUGCU	ENST00000240587.4|TSHZ3|ENSG00000121297.6|teashirt zinc finger homeobox 3
hg19_v2_chr3_+_30648066_30648167	0.232297	UAAUGCU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chrX_+_117629766_117629872	0.223108	UAAUGCU	ENST00000276204.6|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11 	ENST00000276202.7|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11
hg19_v2_chr7_+_106809406_106809460	0.217924	UAAUGCU	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr12_+_69004619_69004699	0.217849	UAAUGCU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr11_-_64646086_64646191	0.217295	UAAUGCU	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr19_-_14629224_14629262	0.216902	UAAUGCU	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr10_+_104263743_104263836	0.211533	UAAUGCU	ENST00000369902.3|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila) 	ENST00000369899.2|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila) 	ENST00000423559.2|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila)
hg19_v2_chr17_+_4613918_4614000	0.211396	UAAUGCU	ENST00000574954.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000346341.2|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000572457.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000381488.6|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000412477.3|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000571428.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000575877.1|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr1_+_2160134_2160134	0.20632	UAAUGCU	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr10_+_104535994_104536014	0.20437	UAAUGCU	ENST00000369889.4|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr3_-_18466787_18466861	0.202875	UAAUGCU	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chrX_+_56590002_56590072	0.198933	UAAUGCU	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr3_-_190040223_190040264	0.197475	UAAUGCU	ENST00000295522.3|CLDN1|ENSG00000163347.5|claudin 1
hg19_v2_chr16_-_8962200_8962258	0.192937	UAAUGCU	ENST00000562843.1|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa 	ENST00000561530.1|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa 	ENST00000396593.2|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa
hg19_v2_chrX_+_49687216_49687265	0.191257	UAAUGCU	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr8_+_40010989_40011008	0.187582	UAAUGCU	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr2_-_169887827_169887839	0.187484	UAAUGCU	ENST00000263817.6|ABCB11|ENSG00000073734.8|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg19_v2_chrX_-_153979315_153979373	0.179754	UAAUGCU	ENST00000369575.3|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000369568.4|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000424127.2|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3
hg19_v2_chr5_+_167718604_167718746	0.179373	UAAUGCU	ENST00000265293.4|WWC1|ENSG00000113645.9|WW and C2 domain containing 1
hg19_v2_chr1_+_63833261_63833282	0.176224	UAAUGCU	ENST00000371108.4|ALG6|ENSG00000088035.11|ALG6, alpha-1,3-glucosyltransferase
hg19_v2_chr8_-_66754172_66754201	0.174285	UAAUGCU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr1_+_214161272_214161322	0.17334	UAAUGCU	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr12_+_96588143_96588185	0.173295	UAAUGCU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr5_-_149492904_149492935	0.170678	UAAUGCU	ENST00000286301.3|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor 	ENST00000511344.1|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor
hg19_v2_chr1_-_204121013_204121027	0.168159	UAAUGCU	ENST00000367201.3|ETNK2|ENSG00000143845.10|ethanolamine kinase 2
hg19_v2_chr11_-_65430251_65430399	0.167858	UAAUGCU	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr5_-_39074479_39074515	0.167776	UAAUGCU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr3_-_160283348_160283376	0.165046	UAAUGCU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr8_-_101965146_101965236	0.161202	UAAUGCU	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr2_-_43453734_43453751	0.159449	UAAUGCU	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr9_-_139010696_139010764	0.156697	UAAUGCU	ENST00000418388.1|C9orf69|ENSG00000238227.3|chromosome 9 open reading frame 69 	ENST00000561457.1|C9orf69|ENSG00000238227.3|chromosome 9 open reading frame 69
hg19_v2_chr12_+_104458235_104458344	0.156517	UAAUGCU	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr2_+_228336849_228336904	0.151952	UAAUGCU	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr16_-_20911641_20911720	0.151484	UAAUGCU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr18_-_45456930_45456970	0.149449	UAAUGCU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr1_+_244214577_244214593	0.147903	UAAUGCU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr3_-_52090461_52090566	0.147697	UAAUGCU	ENST00000296483.6|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7 	ENST00000495880.1|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7
hg19_v2_chr3_+_127872265_127872344	0.145742	UAAUGCU	ENST00000254730.6|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific 	ENST00000483457.1|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific
hg19_v2_chr2_+_70056762_70056847	0.144893	UAAUGCU	ENST00000282570.3|GMCL1|ENSG00000087338.4|germ cell-less, spermatogenesis associated 1
hg19_v2_chr6_+_7107999_7108054	0.14473	UAAUGCU	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr17_-_65241281_65241326	0.144246	UAAUGCU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr12_-_57400227_57400245	0.143312	UAAUGCU	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr7_+_138916231_138916231	0.142533	UAAUGCU	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr11_+_48002076_48002132	0.13905	UAAUGCU	ENST00000418331.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J 	ENST00000440289.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J
hg19_v2_chr10_+_18948311_18948417	0.138127	UAAUGCU	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr1_+_60280458_60280546	0.136721	UAAUGCU	ENST00000455990.1|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1 	ENST00000371208.3|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1
hg19_v2_chr2_+_96068436_96068539	0.136443	UAAUGCU	ENST00000445649.1|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A 	ENST00000447036.1|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A 	ENST00000233379.4|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A 	ENST00000418606.1|FAHD2A|ENSG00000115042.5|fumarylacetoacetate hydrolase domain containing 2A
hg19_v2_chr1_+_101702417_101702481	0.135949	UAAUGCU	ENST00000305352.6|S1PR1|ENSG00000170989.8|sphingosine-1-phosphate receptor 1
hg19_v2_chr14_+_103243813_103243955	0.134338	UAAUGCU	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr4_+_7045042_7045262	0.134286	UAAUGCU	ENST00000310074.7|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B 	ENST00000512388.1|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B
hg19_v2_chr2_+_5832799_5832799	0.132574	UAAUGCU	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr7_+_26677490_26677490	0.131471	UAAUGCU	ENST00000409974.3|C7orf71|ENSG00000222004.3|chromosome 7 open reading frame 71
hg19_v2_chr11_+_63606373_63606418	0.131358	UAAUGCU	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr9_+_117350009_117350111	0.130356	UAAUGCU	ENST00000374050.3|ATP6V1G1|ENSG00000136888.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v2_chr16_-_10674528_10674555	0.127784	UAAUGCU	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr5_-_56247935_56247959	0.127273	UAAUGCU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr14_-_54908043_54908149	0.125253	UAAUGCU	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr4_+_160188889_160188968	0.124233	UAAUGCU	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr16_-_48644061_48644141	0.123714	UAAUGCU	ENST00000262384.3|N4BP1|ENSG00000102921.3|NEDD4 binding protein 1
hg19_v2_chr2_-_24149977_24150007	0.122945	UAAUGCU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr5_-_95297678_95297775	0.118866	UAAUGCU	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr10_+_114709999_114710031	0.118579	UAAUGCU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr14_+_75745477_75745680	0.118281	UAAUGCU	ENST00000303562.4|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554617.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554212.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000535987.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000555242.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr3_-_122233723_122233797	0.112399	UAAUGCU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr8_+_61591337_61591393	0.112228	UAAUGCU	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr3_-_142166904_142166916	0.110848	UAAUGCU	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr20_+_37554955_37555067	0.108995	UAAUGCU	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr1_-_153895377_153895465	0.107033	UAAUGCU	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr8_-_67525473_67525518	0.105478	UAAUGCU	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr7_-_32931387_32931509	0.0987705	UAAUGCU	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr5_+_112312416_112312440	0.0983683	UAAUGCU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr3_-_119813264_119813272	0.0981276	UAAUGCU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr5_+_14581884_14581960	0.0969987	UAAUGCU	ENST00000274217.3|FAM105A|ENSG00000145569.5|family with sequence similarity 105, member A
hg19_v2_chr15_+_89631381_89631391	0.0964687	UAAUGCU	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr17_-_48474828_48474914	0.0918367	UAAUGCU	ENST00000576448.1|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59 	ENST00000225972.7|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59
hg19_v2_chr19_+_11485333_11485367	0.0911012	UAAUGCU	ENST00000312423.2|SWSAP1|ENSG00000173928.2|SWIM-type zinc finger 7 associated protein 1
hg19_v2_chr16_+_67063036_67063088	0.0872267	UAAUGCU	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr2_-_101925055_101925174	0.0865734	UAAUGCU	ENST00000295317.3|RNF149|ENSG00000163162.4|ring finger protein 149
hg19_v2_chr17_-_40306934_40307035	0.0855954	UAAUGCU	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr2_-_39348137_39348212	0.0855579	UAAUGCU	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr2_+_120517174_120517207	0.0852808	UAAUGCU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr1_+_36273743_36273773	0.082987	UAAUGCU	ENST00000373210.3|AGO4|ENSG00000134698.10|argonaute RISC catalytic component 4
hg19_v2_chr3_+_141106643_141106681	0.0814522	UAAUGCU	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr10_-_112064665_112064737	0.0788666	UAAUGCU	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr3_+_49726932_49727014	0.0785708	UAAUGCU	ENST00000327697.6|RNF123|ENSG00000164068.11|ring finger protein 123 	ENST00000432042.1|RNF123|ENSG00000164068.11|ring finger protein 123 	ENST00000454491.1|RNF123|ENSG00000164068.11|ring finger protein 123
hg19_v2_chr5_+_60628074_60628100	0.0784608	UAAUGCU	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr5_+_135468516_135468621	0.0779368	UAAUGCU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr4_-_39979576_39979588	0.0761324	UAAUGCU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr4_-_88141755_88141791	0.0746329	UAAUGCU	ENST00000273963.5|KLHL8|ENSG00000145332.9|kelch-like family member 8
hg19_v2_chr8_+_37553261_37553282	0.0745812	UAAUGCU	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr1_+_206643787_206643803	0.0745104	UAAUGCU	ENST00000367120.3|IKBKE|ENSG00000143466.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v2_chr11_-_85780086_85780161	0.0739539	UAAUGCU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr8_-_134115118_134115298	0.0731201	UAAUGCU	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr12_-_111021110_111021142	0.0731114	UAAUGCU	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr10_+_114206956_114207040	0.0720831	UAAUGCU	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr22_-_50217981_50217981	0.0708493	UAAUGCU	ENST00000457780.2|BRD1|ENSG00000100425.14|bromodomain containing 1
hg19_v2_chr10_+_82213904_82213922	0.0682059	UAAUGCU	ENST00000429989.3|TSPAN14|ENSG00000108219.10|tetraspanin 14
hg19_v2_chr2_+_46524537_46524553	0.0681742	UAAUGCU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr1_-_1624083_1624167	0.0678226	UAAUGCU	ENST00000378662.1|SLC35E2B|ENSG00000189339.7|solute carrier family 35, member E2B 	ENST00000234800.6|SLC35E2B|ENSG00000189339.7|solute carrier family 35, member E2B
hg19_v2_chr7_+_128864848_128864913	0.0659112	UAAUGCU	ENST00000325006.3|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2 	ENST00000446544.2|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr8_-_81083731_81083813	0.064747	UAAUGCU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr1_+_154377669_154377699	0.0638398	UAAUGCU	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr5_+_110559784_110559803	0.0637104	UAAUGCU	ENST00000282356.4|CAMK4|ENSG00000152495.6|calcium/calmodulin-dependent protein kinase IV
hg19_v2_chr1_-_91487013_91487070	0.0629171	UAAUGCU	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr6_+_41040678_41040722	0.0620862	UAAUGCU	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr7_-_98030360_98030441	0.0606078	UAAUGCU	ENST00000005260.8|BAIAP2L1|ENSG00000006453.9|BAI1-associated protein 2-like 1
hg19_v2_chr17_+_35849937_35850006	0.0604273	UAAUGCU	ENST00000394389.4|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr15_-_34628951_34629045	0.0595718	UAAUGCU	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr5_+_153418466_153418565	0.0572848	UAAUGCU	ENST00000522782.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000439768.2|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000436816.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000322602.5|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000522177.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000520899.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3
hg19_v2_chr5_+_67511524_67511628	0.0555762	UAAUGCU	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr21_-_40685477_40685496	0.0543842	UAAUGCU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr18_+_67956135_67956144	0.053697	UAAUGCU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr14_+_31028329_31028340	0.0526747	UAAUGCU	ENST00000206595.6|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase
hg19_v2_chr10_-_13390270_13390316	0.0524651	UAAUGCU	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr14_-_34931458_34931562	0.0523931	UAAUGCU	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chrX_+_122993827_122993910	0.0507421	UAAUGCU	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr19_-_1605424_1605480	0.0505141	UAAUGCU	ENST00000589880.1|UQCR11|ENSG00000127540.7|ubiquinol-cytochrome c reductase, complex III subunit XI 	ENST00000585671.1|UQCR11|ENSG00000127540.7|ubiquinol-cytochrome c reductase, complex III subunit XI 	ENST00000591899.3|UQCR11|ENSG00000127540.7|ubiquinol-cytochrome c reductase, complex III subunit XI
hg19_v2_chr2_+_118846008_118846100	0.0502408	UAAUGCU	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr2_+_158733088_158733214	0.0493979	UAAUGCU	ENST00000605860.1|UPP2|ENSG00000007001.8|uridine phosphorylase 2
hg19_v2_chr3_-_107809816_107809885	0.0488934	UAAUGCU	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr14_+_94492674_94492733	0.0487765	UAAUGCU	ENST00000203664.5|OTUB2|ENSG00000089723.5|OTU domain, ubiquitin aldehyde binding 2 	ENST00000553723.1|OTUB2|ENSG00000089723.5|OTU domain, ubiquitin aldehyde binding 2
hg19_v2_chr11_-_18656028_18656040	0.0486676	UAAUGCU	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr1_+_53527854_53527891	0.047753	UAAUGCU	ENST00000371500.3|PODN|ENSG00000174348.9|podocan 	ENST00000395871.2|PODN|ENSG00000174348.9|podocan 	ENST00000312553.5|PODN|ENSG00000174348.9|podocan
hg19_v2_chrX_+_16964794_16964861	0.0470263	UAAUGCU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr4_-_16228120_16228164	0.0455507	UAAUGCU	ENST00000405303.2|TAPT1|ENSG00000169762.12|transmembrane anterior posterior transformation 1
hg19_v2_chr7_-_113559104_113559120	0.0454554	UAAUGCU	ENST00000284601.3|PPP1R3A|ENSG00000154415.3|protein phosphatase 1, regulatory subunit 3A
hg19_v2_chr7_-_35293740_35293758	0.0448817	UAAUGCU	ENST00000408931.3|TBX20|ENSG00000164532.10|T-box 20
hg19_v2_chr5_-_148930960_148931013	0.0443614	UAAUGCU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr17_+_57970469_57970600	0.0440079	UAAUGCU	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr4_-_10458982_10459007	0.0438604	UAAUGCU	ENST00000326756.3|ZNF518B|ENSG00000178163.3|zinc finger protein 518B
hg19_v2_chr16_+_30710462_30710498	0.0437577	UAAUGCU	ENST00000262518.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000395059.2|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000344771.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein
hg19_v2_chr1_-_78444776_78444800	0.0432118	UAAUGCU	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr8_-_23540402_23540466	0.0427777	UAAUGCU	ENST00000523261.1|NKX3-1|ENSG00000167034.9|NK3 homeobox 1 	ENST00000380871.4|NKX3-1|ENSG00000167034.9|NK3 homeobox 1
hg19_v2_chr2_-_208634287_208634439	0.0416102	UAAUGCU	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr4_+_41937131_41937211	0.0412966	UAAUGCU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr19_-_10514184_10514231	0.0396738	UAAUGCU	ENST00000589629.1|CDC37|ENSG00000105401.2|cell division cycle 37 	ENST00000222005.2|CDC37|ENSG00000105401.2|cell division cycle 37
hg19_v2_chr21_-_34144157_34144175	0.038796	UAAUGCU	ENST00000331923.4|PAXBP1|ENSG00000159086.10|PAX3 and PAX7 binding protein 1
hg19_v2_chr6_-_107780751_107780786	0.0387875	UAAUGCU	ENST00000453874.2|PDSS2|ENSG00000164494.7|prenyl (decaprenyl) diphosphate synthase, subunit 2 	ENST00000369037.4|PDSS2|ENSG00000164494.7|prenyl (decaprenyl) diphosphate synthase, subunit 2 	ENST00000369031.4|PDSS2|ENSG00000164494.7|prenyl (decaprenyl) diphosphate synthase, subunit 2
hg19_v2_chr1_+_193091080_193091222	0.0370185	UAAUGCU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr19_+_34663397_34663473	0.0362661	UAAUGCU	ENST00000540746.2|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000544216.3|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000433627.5|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v2_chr17_-_49337392_49337465	0.036056	UAAUGCU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr1_+_36396677_36396749	0.035297	UAAUGCU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr17_-_71228357_71228533	0.0343961	UAAUGCU	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr10_+_98592009_98592061	0.0334572	UAAUGCU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr10_+_69644404_69644427	0.0329154	UAAUGCU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr15_+_44719394_44719579	0.0300305	UAAUGCU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chrX_-_54384425_54384495	0.0284037	UAAUGCU	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr14_-_31495569_31495636	0.0278787	UAAUGCU	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr18_-_5895954_5895954	0.0266282	UAAUGCU	ENST00000581347.2|TMEM200C|ENSG00000206432.4|transmembrane protein 200C
hg19_v2_chr3_+_178866199_178866311	0.0265233	UAAUGCU	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr2_+_148602058_148602185	0.0259802	UAAUGCU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr5_+_172483347_172483407	0.0251949	UAAUGCU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr1_+_33283043_33283198	0.0241126	UAAUGCU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr12_-_100536608_100536667	0.0226215	UAAUGCU	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chr3_-_155572164_155572236	0.022582	UAAUGCU	ENST00000392845.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1 	ENST00000359479.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1
hg19_v2_chr3_+_180630090_180630311	0.020245	UAAUGCU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr4_-_69083720_69083798	0.0184121	UAAUGCU	ENST00000432593.3|TMPRSS11BNL|ENSG00000226894.3|TMPRSS11B N-terminal like
hg19_v2_chr2_+_46926048_46926095	0.0181292	UAAUGCU	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr4_+_95129061_95129198	0.0169603	UAAUGCU	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr11_-_82782861_82782949	0.0166644	UAAUGCU	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr9_+_119449576_119449638	0.0152807	UAAUGCU	ENST00000450136.1|TRIM32|ENSG00000119401.10|tripartite motif containing 32 	ENST00000373983.2|TRIM32|ENSG00000119401.10|tripartite motif containing 32 	ENST00000411410.1|TRIM32|ENSG00000119401.10|tripartite motif containing 32
hg19_v2_chr19_+_4402659_4402714	0.0140266	UAAUGCU	ENST00000301280.5|CHAF1A|ENSG00000167670.11|chromatin assembly factor 1, subunit A (p150) 	ENST00000585854.1|CHAF1A|ENSG00000167670.11|chromatin assembly factor 1, subunit A (p150)
hg19_v2_chr10_+_180987_181009	0.0129307	UAAUGCU	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr10_-_98346801_98346812	0.0118172	UAAUGCU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr9_-_16870704_16870841	0.0113633	UAAUGCU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr5_-_76788317_76788421	0.0103662	UAAUGCU	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr13_+_20532807_20532841	0.00909148	UAAUGCU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr12_+_20522179_20522203	0.00891064	UAAUGCU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr4_+_77870856_77870919	0.00748275	UAAUGCU	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr2_-_204400113_204400149	0.00688909	UAAUGCU	ENST00000319170.5|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr2_+_102508955_102508955	0.00628693	UAAUGCU	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr9_-_72374848_72374894	0.00598549	UAAUGCU	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr1_-_70671216_70671303	0.00587552	UAAUGCU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr12_+_110338063_110338105	0.00586128	UAAUGCU	ENST00000405876.4|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding
hg19_v2_chr2_-_200322723_200322819	0.00423394	UAAUGCU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr16_+_69599861_69599887	0.00405751	UAAUGCU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr1_+_89149905_89149995	0.0040207	UAAUGCU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
