hg19_v2_chr7_+_107110488_107110515	0.255096	UGACCUA	ENST00000304402.4|GPR22|ENSG00000172209.4|G protein-coupled receptor 22
hg19_v2_chr2_+_182850551_182850607	0.197986	UGACCUA	ENST00000452904.1|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENST00000409137.3|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENST00000280295.3|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v2_chr9_+_12693336_12693460	0.192475	UGACCUA	ENST00000381137.2|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1 	ENST00000388918.5|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1
hg19_v2_chr19_+_30863271_30863338	0.189	UGACCUA	ENST00000355537.3|ZNF536|ENSG00000198597.4|zinc finger protein 536
hg19_v2_chr2_-_166930131_166930149	0.178182	UGACCUA	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr1_-_31845914_31845931	0.134772	UGACCUA	ENST00000373713.2|FABP3|ENSG00000121769.3|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)
hg19_v2_chr5_-_73937244_73937274	0.132676	UGACCUA	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr5_+_6448736_6448736	0.125091	UGACCUA	ENST00000399816.3|UBE2QL1|ENSG00000215218.3|ubiquitin-conjugating enzyme E2Q family-like 1
hg19_v2_chr5_+_173315283_173315335	0.124436	UGACCUA	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr1_-_9970227_9970356	0.111164	UGACCUA	ENST00000377263.1|CTNNBIP1|ENSG00000178585.10|catenin, beta interacting protein 1
hg19_v2_chr3_-_9291063_9291136	0.105452	UGACCUA	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr17_+_38024417_38024478	0.0991967	UGACCUA	ENST00000348931.4|ZPBP2|ENSG00000186075.8|zona pellucida binding protein 2 	ENST00000583811.1|ZPBP2|ENSG00000186075.8|zona pellucida binding protein 2 	ENST00000584588.1|ZPBP2|ENSG00000186075.8|zona pellucida binding protein 2 	ENST00000377940.3|ZPBP2|ENSG00000186075.8|zona pellucida binding protein 2
hg19_v2_chr12_+_52203789_52203789	0.0969888	UGACCUA	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr7_+_28452130_28452154	0.0899485	UGACCUA	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr5_+_95187934_95187939	0.089022	UGACCUA	ENST00000357880.3|C5orf27|ENSG00000236882.3|chromosome 5 open reading frame 27 	ENST00000436592.1|C5orf27|ENSG00000236882.3|chromosome 5 open reading frame 27
hg19_v2_chr3_-_114790179_114790222	0.0863597	UGACCUA	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr20_-_41818373_41818527	0.0862769	UGACCUA	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr12_-_14133053_14133159	0.0816367	UGACCUA	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr17_+_2699697_2699776	0.0802143	UGACCUA	ENST00000254695.8|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000366401.4|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000542807.1|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2
hg19_v2_chr6_+_123317116_123317260	0.0775695	UGACCUA	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr6_+_39016551_39016574	0.0734207	UGACCUA	ENST00000373256.4|GLP1R|ENSG00000112164.5|glucagon-like peptide 1 receptor
hg19_v2_chr1_+_10271674_10271674	0.0725991	UGACCUA	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr3_-_42846021_42846032	0.0694557	UGACCUA	ENST00000321331.7|HIGD1A|ENSG00000181061.9|HIG1 hypoxia inducible domain family, member 1A
hg19_v2_chr18_+_49866496_49866548	0.0680333	UGACCUA	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr2_+_115199876_115199919	0.0680317	UGACCUA	ENST00000436732.1|DPP10|ENSG00000175497.12|dipeptidyl-peptidase 10 (non-functional) 	ENST00000410059.1|DPP10|ENSG00000175497.12|dipeptidyl-peptidase 10 (non-functional)
hg19_v2_chr4_+_172734548_172734654	0.068023	UGACCUA	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr4_+_184020398_184020463	0.064779	UGACCUA	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr6_+_117198400_117198441	0.0635694	UGACCUA	ENST00000332958.2|RFX6|ENSG00000185002.5|regulatory factor X, 6
hg19_v2_chr1_+_84543734_84543775	0.0631576	UGACCUA	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr22_-_22221900_22221970	0.0586596	UGACCUA	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr17_+_27717415_27717618	0.0565252	UGACCUA	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chrX_-_24045303_24045303	0.0559887	UGACCUA	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr11_+_35684288_35684353	0.0558734	UGACCUA	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr17_-_33448468_33448513	0.0552382	UGACCUA	ENST00000591723.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein  	ENST00000587405.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000593039.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein
hg19_v2_chr5_-_39074479_39074515	0.0551237	UGACCUA	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr7_+_97736197_97736211	0.0531594	UGACCUA	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr13_-_21476900_21476949	0.0523937	UGACCUA	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr14_+_57735614_57735629	0.049866	UGACCUA	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr3_+_38495333_38495422	0.0487271	UGACCUA	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr17_-_33416231_33416338	0.0486538	UGACCUA	ENST00000584655.1|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000447669.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000315249.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chrX_+_130192318_130192331	0.048602	UGACCUA	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr18_+_54318616_54318640	0.044443	UGACCUA	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr17_-_56595196_56595266	0.0408997	UGACCUA	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chr1_+_233749739_233749761	0.0407854	UGACCUA	ENST00000366621.3|KCNK1|ENSG00000135750.10|potassium channel, subfamily K, member 1
hg19_v2_chr6_-_116381918_116381977	0.0384688	UGACCUA	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr8_+_61591337_61591393	0.0384662	UGACCUA	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr2_-_235405679_235405739	0.0356528	UGACCUA	ENST00000390645.2|ARL4C|ENSG00000188042.5|ADP-ribosylation factor-like 4C
hg19_v2_chr20_-_36156125_36156250	0.0353079	UGACCUA	ENST00000397135.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein 	ENST00000397137.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr21_-_39288743_39288765	0.0343296	UGACCUA	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr3_+_105085734_105085760	0.0333704	UGACCUA	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr15_+_89631381_89631391	0.0333411	UGACCUA	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr12_+_108525517_108525531	0.0322187	UGACCUA	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr1_+_181057638_181057692	0.0321701	UGACCUA	ENST00000367577.4|IER5|ENSG00000162783.8|immediate early response 5
hg19_v2_chr12_+_862089_862343	0.0298628	UGACCUA	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr9_-_127533519_127533576	0.0297407	UGACCUA	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr13_+_58206655_58206655	0.0297261	UGACCUA	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr15_-_65670360_65670378	0.0271989	UGACCUA	ENST00000327987.4|IGDCC3|ENSG00000174498.9|immunoglobulin superfamily, DCC subclass, member 3
hg19_v2_chr6_+_167412665_167412698	0.0240153	UGACCUA	ENST00000366847.4|FGFR1OP|ENSG00000213066.7|FGFR1 oncogene partner
hg19_v2_chr12_+_56137064_56137183	0.022091	UGACCUA	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr1_+_67218124_67218159	0.0211035	UGACCUA	ENST00000282670.2|TCTEX1D1|ENSG00000152760.5|Tctex1 domain containing 1
hg19_v2_chr16_+_69599861_69599887	0.0196183	UGACCUA	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chrX_+_119737806_119737835	0.0171365	UGACCUA	ENST00000371317.5|MCTS1|ENSG00000232119.3|malignant T cell amplified sequence 1
hg19_v2_chrX_-_63425561_63425624	0.0166469	UGACCUA	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr1_-_100715372_100715400	0.0137101	UGACCUA	ENST00000370131.3|DBT|ENSG00000137992.10|dihydrolipoamide branched chain transacylase E2 	ENST00000370132.4|DBT|ENSG00000137992.10|dihydrolipoamide branched chain transacylase E2
hg19_v2_chr2_-_26101374_26101389	0.0129227	UGACCUA	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr8_+_48920960_48921011	0.0128605	UGACCUA	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr6_-_42419649_42419789	0.00958524	UGACCUA	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr1_+_113615794_113615884	0.00894748	UGACCUA	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr15_-_72410109_72410161	0.00888914	UGACCUA	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr7_+_77469439_77469497	0.00876581	UGACCUA	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr20_-_58515344_58515366	0.00876539	UGACCUA	ENST00000370996.3|PPP1R3D|ENSG00000132825.5|protein phosphatase 1, regulatory subunit 3D
hg19_v2_chr15_-_34394119_34394149	0.00855837	UGACCUA	ENST00000256545.4|EMC7|ENSG00000134153.5|ER membrane protein complex subunit 7
hg19_v2_chr5_-_140998616_140998639	0.00832592	UGACCUA	ENST00000389054.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398562.2|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000389057.5|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398566.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398557.4|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000253811.6|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1
hg19_v2_chr12_-_51420128_51420183	0.00805033	UGACCUA	ENST00000262051.7|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000547732.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000262052.5|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000546488.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000550714.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000548193.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000547579.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000546743.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr4_-_159593179_159593220	0.00780946	UGACCUA	ENST00000379205.4|C4orf46|ENSG00000205208.4|chromosome 4 open reading frame 46
hg19_v2_chr1_+_62902308_62902335	0.00570884	UGACCUA	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr5_+_49961727_49961740	0.00514357	UGACCUA	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr11_-_64684672_64684722	0.00422689	UGACCUA	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr2_-_25475120_25475180	0.00125796	UGACCUA	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr8_-_89339705_89339721	0.00113763	UGACCUA	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr3_+_101292939_101293063	0.00102983	UGACCUA	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
