ISMARA results: HBP1_HMGB_SSRP1

Motif ID: HBP1_HMGB_SSRP1_UBTF.p2

Gene Symbol	Entrez ID	Gene Name
HBP1	26959	HMG-box transcription factor 1
HMGB2	3148	high-mobility group box 2
HMGB3	3149	high-mobility group box 3
SSRP1	6749	structure specific recognition protein 1
UBTF	7343	upstream binding transcription factor, RNA polymerase I

Gene	Promoter	Pearson	P-value	Plot
SSRP1	chr11_-_57103324	-0.75	6.9e-41	Click!
HMGB3	chrX_+_150151757	-0.68	1.9e-30	Click!
HMGB2	chr4_-_174255454	-0.62	1.9e-24	Click!
UBTF	chr17_-_42296865	-0.31	3.3e-06	Click!
HBP1	chr7_+_106809405	0.26	9.6e-05	Click!

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Promoter	Score	Refseq	Gene Symbol	Gene Name
chr18_-_52988916	48.464	NM_001243234 NM_001243235	TCF4	transcription factor 4
chrX_-_13835187	40.991		GPM6B	glycoprotein M6B
chr12_-_16757944	38.471		LMO3	LIM domain only 3 (rhombotin-like 2)
chr6_+_89790412	37.966	NM_006813	PNRC1	proline-rich nuclear receptor coactivator 1
chr6_+_89790464	35.709		PNRC1	proline-rich nuclear receptor coactivator 1
chrX_-_13835012	34.599		GPM6B	glycoprotein M6B
chrX_-_13835213	33.494		GPM6B	glycoprotein M6B
chr17_+_36861398	33.484		MLLT6	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
chr11_+_57365577	31.555	NM_001032295	SERPING1	serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
chr18_-_53177999	31.139	NM_001243231	TCF4	transcription factor 4
chrX_-_13835313	29.596	NM_001001995 NM_001001996 NM_005278	GPM6B	glycoprotein M6B
chr12_-_91573264	29.182	NM_133503	DCN	decorin
chr11_+_57365026	29.048	NM_000062	SERPING1	serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
chr3_+_39509069	27.570	NM_182935	MOBP	myelin-associated oligodendrocyte basic protein
chr6_+_99872769	27.535
chr14_-_92413738	27.471		FBLN5	fibulin 5
chr12_-_91576579	26.889		DCN	decorin
chr18_-_53071225	26.623	NM_001243232	TCF4	transcription factor 4
chr2_+_149633173	26.020
chr12_-_16760935	25.942	NM_001001395 NM_001243609	LMO3	LIM domain only 3 (rhombotin-like 2)

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enrichment	p-value	GO term	description
3.24	8.41e-11	GO:0007156	homophilic cell adhesion
3.22	4.09e-02	GO:0048663	neuron fate commitment
3.19	1.39e-02	GO:0001764	neuron migration
3.09	2.24e-03	GO:0032526	response to retinoic acid
2.99	1.40e-03	GO:0048565	digestive tract development
2.95	2.79e-02	GO:0050680	negative regulation of epithelial cell proliferation
2.91	8.55e-04	GO:0048706	embryonic skeletal system development
2.91	2.50e-03	GO:0033189	response to vitamin A
2.88	1.13e-03	GO:0055123	digestive system development
2.76	7.39e-03	GO:0030336	negative regulation of cell migration
2.76	7.39e-03	GO:2000146	negative regulation of cell motility
2.67	9.21e-03	GO:0051271	negative regulation of cellular component movement
2.62	6.88e-05	GO:0048705	skeletal system morphogenesis
2.56	2.69e-05	GO:0045165	cell fate commitment
2.56	1.39e-02	GO:0021537	telencephalon development
2.56	1.39e-02	GO:0040013	negative regulation of locomotion
2.54	3.54e-12	GO:0016337	cell-cell adhesion
2.31	3.18e-04	GO:0030900	forebrain development
2.26	3.12e-03	GO:0048562	embryonic organ morphogenesis
2.21	5.34e-08	GO:0051093	negative regulation of developmental process

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Showing 1 to 20 of 23 entries

enrichment	p-value	GO term	description
3.69	1.42e-03	GO:0005581	collagen
2.59	7.47e-05	GO:0044420	extracellular matrix part
2.09	3.69e-02	GO:0043292	contractile fiber
2.03	2.07e-06	GO:0005578	proteinaceous extracellular matrix
2.03	1.67e-02	GO:0045211	postsynaptic membrane
1.99	2.46e-03	GO:0005911	cell-cell junction
1.91	4.23e-06	GO:0031012	extracellular matrix
1.91	1.58e-04	GO:0044456	synapse part
1.91	2.58e-02	GO:0030424	axon
1.88	3.78e-02	GO:0031252	cell leading edge
1.78	1.71e-07	GO:0030054	cell junction
1.78	1.05e-04	GO:0045202	synapse
1.70	2.23e-02	GO:0015629	actin cytoskeleton
1.65	9.03e-03	GO:0009986	cell surface
1.52	5.96e-06	GO:0044421	extracellular region part
1.49	1.84e-13	GO:0044459	plasma membrane part
1.46	1.24e-03	GO:0042995	cell projection
1.45	2.58e-05	GO:0005887	integral to plasma membrane
1.43	4.05e-05	GO:0031226	intrinsic to plasma membrane
1.43	1.39e-02	GO:0005615	extracellular space

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Showing 1 to 20 of 27 entries

enrichment	p-value	GO term	description
4.98	1.24e-02	GO:0004115	3',5'-cyclic-AMP phosphodiesterase activity
4.69	2.37e-02	GO:0005212	structural constituent of eye lens
2.90	2.95e-03	GO:0005178	integrin binding
2.79	4.45e-02	GO:0004879	ligand-dependent nuclear receptor activity
2.43	4.22e-03	GO:0004222	metalloendopeptidase activity
2.02	1.77e-03	GO:0000975	regulatory region DNA binding
2.02	1.77e-03	GO:0001067	regulatory region nucleic acid binding
2.02	1.77e-03	GO:0044212	transcription regulatory region DNA binding
2.01	3.26e-03	GO:0010843	promoter binding
1.93	6.23e-05	GO:0016563	transcription activator activity
1.90	2.25e-11	GO:0043565	sequence-specific DNA binding
1.90	1.12e-03	GO:0032403	protein complex binding
1.88	1.63e-16	GO:0001071	nucleic acid binding transcription factor activity
1.88	1.63e-16	GO:0003700	sequence-specific DNA binding transcription factor activity
1.79	1.92e-08	GO:0005509	calcium ion binding
1.69	1.59e-10	GO:0030528	transcription regulator activity
1.66	4.26e-02	GO:0003779	actin binding
1.63	2.95e-02	GO:0000988	protein binding transcription factor activity
1.63	2.95e-02	GO:0000989	transcription factor binding transcription factor activity
1.61	4.96e-02	GO:0003712	transcription cofactor activity