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averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for AGCACCA

Z-value: 1.83

Motif logo

miRNA associated with seed AGCACCA

NamemiRBASE accession
MIMAT0000086
MIMAT0000100
MIMAT0000681

Activity profile of AGCACCA motif

721_B_lymphoblasts AmygdalaBM-CD33+MyeloidbronchialepithelialcellsCerebellumPedunclesDRGfetalThyroidkidneyLiverlymphomaburkittsRajiOvaryPB-BDCA4+Dentritic_CellsPB-CD56+NKCellsPonsSkeletalMusclesubthalamicnucleusTestisGermCellThalamusTonsilUterusCorpusNCI60_1_A498NCI60_1_CAKI-1NCI60_1_EKVXNCI60_1_HL-60NCI60_1_HT29NCI60_1_KM12NCI60_1_MCF7NCI60_1_MOLT-4NCI60_1_NCI-H460NCI60_1_OVCAR-5NCI60_1_RXF-393NCI60_1_SK-MEL-28NCI60_1_SN12CNCI60_1_SW-620NCI60_1_UACC-257−0.2−0.15−0.1−0.0500.050.10.150.2
activity (log2(tpm) per TFBS)

Sorted Z-values of AGCACCA motif

−20246PituitaryNCI60_1_KM12NCI60_1_OVCAR-5NCI60_1_ACHN721_B_lymphoblasts NCI60_1_SK-MEL-2NCI60_1_HCT-15NCI60_1_UACC-257NCI60_1_CAKI-1NCI60_1_HL-60lymphomaburkittsDaudiWholeBrainleukemiapromyelocytic(hl60)PancreaticIsletsNCI60_1_OVCAR-3LiverNCI60_1_MDA-MB-435leukemialymphoblastic(molt4)lymphomaburkittsRajiNCI60_1_MOLT-4BM-CD34+bonemarrowNCI60_1_CCRF-CEMsubthalamicnucleuscerebellumNCI60_1_OVCAR-8TestisGermCellNCI60_1_RXF-393fetalliverTONGUEfetalThyroidDRGciliaryganglionSuperiorCervicalGanglionAppendix
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCACCA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in C2:CP category:

Gene overrepresentation in C2:CP:REACTOME category: