averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BATF | hg19_v2_chr14_+_75988851_75988903 | -0.23 | 6.1e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_223889285 Show fit | 54.48 |
ENST00000433674.2
|
calpain 2, (m/II) large subunit |
|
chr6_-_31704282 Show fit | 39.29 |
ENST00000375784.3
ENST00000375779.2 |
chloride intracellular channel 1 |
|
chr11_-_33744487 Show fit | 38.26 |
ENST00000426650.2
|
CD59 molecule, complement regulatory protein |
|
chr5_+_159848854 Show fit | 37.54 |
ENST00000517480.1
ENST00000520452.1 ENST00000393964.1 |
pituitary tumor-transforming 1 |
|
chr11_-_33743952 Show fit | 36.14 |
ENST00000534312.1
|
CD59 molecule, complement regulatory protein |
|
chr6_+_63921399 Show fit | 34.58 |
ENST00000356170.3
|
FK506 binding protein 1C |
|
chr16_-_69760409 Show fit | 32.59 |
ENST00000561500.1
ENST00000439109.2 ENST00000564043.1 ENST00000379046.2 ENST00000379047.3 |
NAD(P)H dehydrogenase, quinone 1 |
|
chr2_+_10262442 Show fit | 30.14 |
ENST00000360566.2
|
ribonucleotide reductase M2 |
|
chr1_-_151965048 Show fit | 30.05 |
ENST00000368809.1
|
S100 calcium binding protein A10 |
|
chr17_-_79481666 Show fit | 28.22 |
ENST00000575659.1
|
actin, gamma 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 205.3 | GO:0002377 | immunoglobulin production(GO:0002377) |
1.5 | 132.4 | GO:0006521 | regulation of cellular amino acid metabolic process(GO:0006521) |
0.8 | 131.0 | GO:0038096 | immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096) |
22.5 | 90.0 | GO:0001971 | negative regulation of activation of membrane attack complex(GO:0001971) |
5.3 | 74.0 | GO:0060315 | negative regulation of ryanodine-sensitive calcium-release channel activity(GO:0060315) |
1.5 | 68.8 | GO:2000816 | negative regulation of mitotic sister chromatid separation(GO:2000816) |
0.9 | 68.0 | GO:0070126 | mitochondrial translational termination(GO:0070126) |
1.4 | 58.1 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.2 | 55.7 | GO:0008380 | RNA splicing(GO:0008380) |
1.3 | 54.8 | GO:0042149 | cellular response to glucose starvation(GO:0042149) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 129.0 | GO:0016604 | nuclear body(GO:0016604) |
0.7 | 122.2 | GO:0101002 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.2 | 98.2 | GO:0070161 | anchoring junction(GO:0070161) |
0.9 | 85.9 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.7 | 79.4 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.6 | 73.3 | GO:0005840 | ribosome(GO:0005840) |
4.6 | 73.2 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.5 | 62.9 | GO:0016605 | PML body(GO:0016605) |
1.1 | 59.8 | GO:0016235 | aggresome(GO:0016235) |
4.6 | 55.7 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 288.7 | GO:0003823 | antigen binding(GO:0003823) |
0.6 | 138.7 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
3.0 | 104.8 | GO:0001848 | complement binding(GO:0001848) |
2.1 | 83.7 | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity(GO:0004198) |
2.8 | 82.6 | GO:0005527 | macrolide binding(GO:0005527) FK506 binding(GO:0005528) |
2.1 | 66.5 | GO:0097200 | cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200) |
0.8 | 59.4 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.5 | 57.5 | GO:0002020 | protease binding(GO:0002020) |
1.7 | 50.8 | GO:0070003 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
16.8 | 50.5 | GO:0036317 | tyrosyl-RNA phosphodiesterase activity(GO:0036317) 5'-tyrosyl-DNA phosphodiesterase activity(GO:0070260) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 116.9 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
1.3 | 69.2 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.9 | 68.1 | PID ILK PATHWAY | Integrin-linked kinase signaling |
1.1 | 51.8 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
1.7 | 50.3 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.8 | 46.0 | PID AURORA B PATHWAY | Aurora B signaling |
0.5 | 41.4 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
1.1 | 39.7 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.5 | 36.5 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.6 | 34.6 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 139.1 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |
0.6 | 101.3 | REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE | Genes involved in SRP-dependent cotranslational protein targeting to membrane |
2.4 | 80.6 | REACTOME APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1 | Genes involved in APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 |
0.5 | 59.6 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
1.9 | 57.7 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
1.6 | 55.3 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.4 | 54.6 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
2.2 | 52.8 | REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION | Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
0.6 | 51.9 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
1.7 | 50.3 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |