averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
BATF3
|
ENSG00000123685.4 | basic leucine zipper ATF-like transcription factor 3 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BATF3 | hg19_v2_chr1_-_212873267_212873332 | -0.20 | 2.6e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_172198190 | 12.35 |
ENST00000239223.3
|
DUSP1
|
dual specificity phosphatase 1 |
chr12_-_92539614 | 11.00 |
ENST00000256015.3
|
BTG1
|
B-cell translocation gene 1, anti-proliferative |
chr6_+_32939964 | 4.89 |
ENST00000607833.1
|
BRD2
|
bromodomain containing 2 |
chr14_-_50053081 | 4.85 |
ENST00000396020.3
ENST00000245458.6 |
RPS29
|
ribosomal protein S29 |
chr22_+_38597889 | 4.21 |
ENST00000338483.2
ENST00000538320.1 ENST00000538999.1 ENST00000441709.1 |
MAFF
|
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F |
chr11_+_102217936 | 4.15 |
ENST00000532832.1
ENST00000530675.1 ENST00000533742.1 ENST00000227758.2 ENST00000532672.1 ENST00000531259.1 ENST00000527465.1 |
BIRC2
|
baculoviral IAP repeat containing 2 |
chr15_-_34394119 | 3.62 |
ENST00000256545.4
|
EMC7
|
ER membrane protein complex subunit 7 |
chr19_-_47616992 | 3.58 |
ENST00000253048.5
|
ZC3H4
|
zinc finger CCCH-type containing 4 |
chr10_+_123923205 | 3.43 |
ENST00000369004.3
ENST00000260733.3 |
TACC2
|
transforming, acidic coiled-coil containing protein 2 |
chr10_+_123922941 | 3.35 |
ENST00000360561.3
|
TACC2
|
transforming, acidic coiled-coil containing protein 2 |
chr3_-_101405539 | 3.32 |
ENST00000469605.1
ENST00000495401.1 ENST00000394077.3 |
RPL24
|
ribosomal protein L24 |
chr10_+_123923105 | 3.16 |
ENST00000368999.1
|
TACC2
|
transforming, acidic coiled-coil containing protein 2 |
chr19_-_18392422 | 3.09 |
ENST00000252818.3
|
JUND
|
jun D proto-oncogene |
chr16_+_3068393 | 2.99 |
ENST00000573001.1
|
TNFRSF12A
|
tumor necrosis factor receptor superfamily, member 12A |
chr7_-_93633684 | 2.99 |
ENST00000222547.3
ENST00000425626.1 |
BET1
|
Bet1 golgi vesicular membrane trafficking protein |
chr7_-_93633658 | 2.98 |
ENST00000433727.1
|
BET1
|
Bet1 golgi vesicular membrane trafficking protein |
chr22_+_31518938 | 2.84 |
ENST00000412985.1
ENST00000331075.5 ENST00000412277.2 ENST00000420017.1 ENST00000400294.2 ENST00000405300.1 ENST00000404390.3 |
INPP5J
|
inositol polyphosphate-5-phosphatase J |
chr5_-_175964366 | 2.84 |
ENST00000274811.4
|
RNF44
|
ring finger protein 44 |
chr2_-_220264703 | 2.78 |
ENST00000519905.1
ENST00000523282.1 ENST00000434339.1 ENST00000457935.1 |
DNPEP
|
aspartyl aminopeptidase |
chr3_+_38206975 | 2.74 |
ENST00000446845.1
ENST00000311806.3 |
OXSR1
|
oxidative stress responsive 1 |
chr3_-_52312636 | 2.20 |
ENST00000296490.3
|
WDR82
|
WD repeat domain 82 |
chr15_-_34394008 | 2.20 |
ENST00000527822.1
ENST00000528949.1 |
EMC7
|
ER membrane protein complex subunit 7 |
chr6_+_31939608 | 2.18 |
ENST00000375331.2
ENST00000375333.2 |
STK19
|
serine/threonine kinase 19 |
chr6_-_91006627 | 2.12 |
ENST00000537989.1
|
BACH2
|
BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
chr1_+_156030937 | 2.10 |
ENST00000361084.5
|
RAB25
|
RAB25, member RAS oncogene family |
chr2_-_74757066 | 1.90 |
ENST00000377526.3
|
AUP1
|
ancient ubiquitous protein 1 |
chr7_+_100464760 | 1.64 |
ENST00000200457.4
|
TRIP6
|
thyroid hormone receptor interactor 6 |
chr8_-_67090825 | 1.64 |
ENST00000276571.3
|
CRH
|
corticotropin releasing hormone |
chr2_-_65357225 | 1.60 |
ENST00000398529.3
ENST00000409751.1 ENST00000356214.7 ENST00000409892.1 ENST00000409784.3 |
RAB1A
|
RAB1A, member RAS oncogene family |
chr6_-_91006461 | 1.59 |
ENST00000257749.4
ENST00000343122.3 ENST00000406998.2 ENST00000453877.1 |
BACH2
|
BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
chr1_+_70671363 | 1.53 |
ENST00000370951.1
ENST00000370950.3 ENST00000405432.1 ENST00000454435.2 |
SRSF11
|
serine/arginine-rich splicing factor 11 |
chr8_+_37594130 | 1.33 |
ENST00000518526.1
ENST00000523887.1 ENST00000276461.5 |
ERLIN2
|
ER lipid raft associated 2 |
chr15_-_42840961 | 1.30 |
ENST00000563454.1
ENST00000397130.3 ENST00000570160.1 ENST00000323443.2 |
LRRC57
|
leucine rich repeat containing 57 |
chr2_-_43823093 | 1.16 |
ENST00000405006.4
|
THADA
|
thyroid adenoma associated |
chr17_-_49124230 | 1.15 |
ENST00000510283.1
ENST00000510855.1 |
SPAG9
|
sperm associated antigen 9 |
chr4_-_39367949 | 1.14 |
ENST00000503784.1
ENST00000349703.2 ENST00000381897.1 |
RFC1
|
replication factor C (activator 1) 1, 145kDa |
chr2_-_43823119 | 1.12 |
ENST00000403856.1
ENST00000404790.1 ENST00000405975.2 ENST00000415080.2 |
THADA
|
thyroid adenoma associated |
chr6_-_106773491 | 0.96 |
ENST00000360666.4
|
ATG5
|
autophagy related 5 |
chr6_-_106773610 | 0.91 |
ENST00000369076.3
ENST00000369070.1 |
ATG5
|
autophagy related 5 |
chr4_-_104119528 | 0.90 |
ENST00000380026.3
ENST00000503705.1 ENST00000265148.3 |
CENPE
|
centromere protein E, 312kDa |
chr1_+_153750622 | 0.89 |
ENST00000532853.1
|
SLC27A3
|
solute carrier family 27 (fatty acid transporter), member 3 |
chr6_-_106773291 | 0.86 |
ENST00000343245.3
|
ATG5
|
autophagy related 5 |
chr3_-_119182523 | 0.81 |
ENST00000319172.5
|
TMEM39A
|
transmembrane protein 39A |
chr20_+_42219559 | 0.79 |
ENST00000373030.3
ENST00000373039.4 |
IFT52
|
intraflagellar transport 52 homolog (Chlamydomonas) |
chr5_+_112849373 | 0.75 |
ENST00000161863.4
ENST00000515883.1 |
YTHDC2
|
YTH domain containing 2 |
chr6_+_37400974 | 0.73 |
ENST00000455891.1
ENST00000373451.4 |
CMTR1
|
cap methyltransferase 1 |
chr11_-_28129656 | 0.58 |
ENST00000263181.6
|
KIF18A
|
kinesin family member 18A |
chr1_-_70671216 | 0.57 |
ENST00000370952.3
|
LRRC40
|
leucine rich repeat containing 40 |
chr18_+_76829441 | 0.54 |
ENST00000458297.2
|
ATP9B
|
ATPase, class II, type 9B |
chr1_+_228353495 | 0.43 |
ENST00000366711.3
|
IBA57
|
IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae) |
chr15_-_66790146 | 0.42 |
ENST00000316634.5
|
SNAPC5
|
small nuclear RNA activating complex, polypeptide 5, 19kDa |
chr10_+_35484793 | 0.38 |
ENST00000488741.1
ENST00000474931.1 ENST00000468236.1 ENST00000344351.5 ENST00000490511.1 |
CREM
|
cAMP responsive element modulator |
chr2_+_74757050 | 0.21 |
ENST00000352222.3
ENST00000437202.1 |
HTRA2
|
HtrA serine peptidase 2 |
chr11_+_12696102 | 0.19 |
ENST00000527636.1
ENST00000527376.1 |
TEAD1
|
TEA domain family member 1 (SV40 transcriptional enhancer factor) |
chr15_+_42841008 | 0.13 |
ENST00000260372.3
ENST00000568876.1 ENST00000568846.2 ENST00000562398.1 |
HAUS2
|
HAUS augmin-like complex, subunit 2 |
chr4_+_170581213 | 0.12 |
ENST00000507875.1
|
CLCN3
|
chloride channel, voltage-sensitive 3 |
chr9_-_100684845 | 0.06 |
ENST00000375119.3
|
C9orf156
|
chromosome 9 open reading frame 156 |
chr9_-_99381660 | 0.05 |
ENST00000375240.3
ENST00000463569.1 |
CDC14B
|
cell division cycle 14B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 4.1 | GO:1902523 | positive regulation of protein K63-linked ubiquitination(GO:1902523) |
0.9 | 2.7 | GO:2000687 | negative regulation of rubidium ion transport(GO:2000681) negative regulation of rubidium ion transmembrane transporter activity(GO:2000687) |
0.9 | 2.7 | GO:0044034 | negative stranded viral RNA replication(GO:0039689) multi-organism biosynthetic process(GO:0044034) |
0.9 | 6.0 | GO:0048280 | vesicle fusion with Golgi apparatus(GO:0048280) |
0.8 | 11.0 | GO:2000271 | positive regulation of fibroblast apoptotic process(GO:2000271) |
0.8 | 3.3 | GO:1902626 | assembly of large subunit precursor of preribosome(GO:1902626) |
0.8 | 12.3 | GO:0035970 | peptidyl-threonine dephosphorylation(GO:0035970) |
0.6 | 2.3 | GO:1901895 | negative regulation of calcium-transporting ATPase activity(GO:1901895) |
0.5 | 1.6 | GO:0051462 | cortisol secretion(GO:0043400) positive regulation of corticotropin secretion(GO:0051461) regulation of cortisol secretion(GO:0051462) negative regulation of glucagon secretion(GO:0070093) positive regulation of corticosterone secretion(GO:2000854) |
0.4 | 3.0 | GO:0006931 | substrate-dependent cell migration, cell attachment to substrate(GO:0006931) |
0.3 | 1.6 | GO:0008588 | release of cytoplasmic sequestered NF-kappaB(GO:0008588) |
0.3 | 1.3 | GO:0090206 | negative regulation of cholesterol biosynthetic process(GO:0045541) negative regulation of cholesterol metabolic process(GO:0090206) |
0.2 | 0.8 | GO:0035720 | intraciliary anterograde transport(GO:0035720) |
0.2 | 4.2 | GO:0007567 | parturition(GO:0007567) |
0.2 | 1.2 | GO:0090074 | negative regulation of protein homodimerization activity(GO:0090074) |
0.2 | 2.2 | GO:0080182 | histone H3-K4 trimethylation(GO:0080182) |
0.1 | 0.9 | GO:0007079 | mitotic chromosome movement towards spindle pole(GO:0007079) |
0.1 | 0.7 | GO:0080009 | mRNA methylation(GO:0080009) |
0.1 | 2.8 | GO:0031115 | negative regulation of microtubule polymerization(GO:0031115) |
0.1 | 2.1 | GO:0031268 | pseudopodium organization(GO:0031268) |
0.1 | 3.1 | GO:0002076 | osteoblast development(GO:0002076) |
0.1 | 1.6 | GO:0090110 | cargo loading into COPII-coated vesicle(GO:0090110) |
0.1 | 0.8 | GO:0044829 | positive regulation by host of viral genome replication(GO:0044829) |
0.1 | 0.2 | GO:1904924 | negative regulation of mitophagy in response to mitochondrial depolarization(GO:1904924) |
0.1 | 1.9 | GO:0030970 | retrograde protein transport, ER to cytosol(GO:0030970) |
0.1 | 0.4 | GO:0006384 | transcription initiation from RNA polymerase III promoter(GO:0006384) |
0.0 | 1.1 | GO:0070987 | error-free translesion synthesis(GO:0070987) |
0.0 | 6.9 | GO:0021987 | cerebral cortex development(GO:0021987) |
0.0 | 0.6 | GO:0072520 | seminiferous tubule development(GO:0072520) |
0.0 | 4.9 | GO:0006334 | nucleosome assembly(GO:0006334) |
0.0 | 4.9 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.0 | 0.1 | GO:0048388 | endosomal lumen acidification(GO:0048388) |
0.0 | 0.4 | GO:0016226 | iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163) |
0.0 | 1.5 | GO:0006369 | termination of RNA polymerase II transcription(GO:0006369) |
0.0 | 0.3 | GO:0045332 | lipid translocation(GO:0034204) phospholipid translocation(GO:0045332) |
0.0 | 3.7 | GO:1902593 | single-organism nuclear import(GO:1902593) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 5.8 | GO:0072546 | ER membrane protein complex(GO:0072546) |
0.5 | 2.7 | GO:0034274 | Atg12-Atg5-Atg16 complex(GO:0034274) |
0.4 | 3.1 | GO:0035976 | AP1 complex(GO:0035976) |
0.4 | 1.9 | GO:0000836 | Hrd1p ubiquitin ligase complex(GO:0000836) |
0.3 | 1.6 | GO:0045323 | interleukin-1 receptor complex(GO:0045323) |
0.3 | 2.3 | GO:0098554 | cytoplasmic side of endoplasmic reticulum membrane(GO:0098554) |
0.3 | 4.4 | GO:0035631 | CD40 receptor complex(GO:0035631) |
0.3 | 1.6 | GO:0043196 | varicosity(GO:0043196) |
0.2 | 2.2 | GO:0072357 | PTW/PP1 phosphatase complex(GO:0072357) |
0.2 | 1.1 | GO:0005663 | DNA replication factor C complex(GO:0005663) |
0.1 | 1.5 | GO:1990023 | mitotic spindle midzone(GO:1990023) |
0.1 | 6.0 | GO:0005801 | cis-Golgi network(GO:0005801) |
0.1 | 0.8 | GO:0044292 | dendrite terminus(GO:0044292) |
0.1 | 2.1 | GO:0031143 | pseudopodium(GO:0031143) |
0.1 | 4.9 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.1 | 3.7 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.0 | 2.8 | GO:0043198 | dendritic shaft(GO:0043198) |
0.0 | 3.3 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 0.1 | GO:0070652 | HAUS complex(GO:0070652) |
0.0 | 10.7 | GO:0005815 | microtubule organizing center(GO:0005815) |
0.0 | 3.0 | GO:0001726 | ruffle(GO:0001726) |
0.0 | 2.8 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 1.6 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.0 | 0.1 | GO:0071148 | TEAD-1-YAP complex(GO:0071148) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.1 | 12.3 | GO:0008330 | protein tyrosine/threonine phosphatase activity(GO:0008330) |
1.4 | 4.1 | GO:0098770 | FBXO family protein binding(GO:0098770) |
0.5 | 2.7 | GO:0019776 | Atg8 ligase activity(GO:0019776) |
0.3 | 3.7 | GO:0001206 | transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001206) |
0.3 | 2.8 | GO:0004445 | inositol-polyphosphate 5-phosphatase activity(GO:0004445) phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485) |
0.2 | 0.9 | GO:0043515 | kinetochore binding(GO:0043515) |
0.2 | 1.1 | GO:0003689 | DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170) |
0.2 | 1.9 | GO:0097027 | ubiquitin-protein transferase activator activity(GO:0097027) |
0.1 | 0.7 | GO:0008174 | mRNA methyltransferase activity(GO:0008174) |
0.1 | 2.2 | GO:0042800 | histone methyltransferase activity (H3-K4 specific)(GO:0042800) |
0.1 | 4.9 | GO:0070577 | lysine-acetylated histone binding(GO:0070577) |
0.1 | 2.8 | GO:0070006 | metalloaminopeptidase activity(GO:0070006) |
0.1 | 3.1 | GO:0016922 | ligand-dependent nuclear receptor binding(GO:0016922) |
0.1 | 1.2 | GO:0005078 | MAP-kinase scaffold activity(GO:0005078) |
0.1 | 1.6 | GO:0005149 | interleukin-1 receptor binding(GO:0005149) |
0.1 | 0.9 | GO:0031957 | very long-chain fatty acid-CoA ligase activity(GO:0031957) |
0.1 | 6.0 | GO:0019905 | syntaxin binding(GO:0019905) |
0.1 | 0.8 | GO:1990247 | N6-methyladenosine-containing RNA binding(GO:1990247) |
0.0 | 9.9 | GO:0035257 | nuclear hormone receptor binding(GO:0035257) |
0.0 | 1.6 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
0.0 | 8.2 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 2.7 | GO:0004702 | receptor signaling protein serine/threonine kinase activity(GO:0004702) |
0.0 | 0.4 | GO:0008140 | cAMP response element binding protein binding(GO:0008140) |
0.0 | 1.3 | GO:0015485 | cholesterol binding(GO:0015485) |
0.0 | 0.6 | GO:0051010 | microtubule plus-end binding(GO:0051010) |
0.0 | 0.1 | GO:0072320 | volume-sensitive chloride channel activity(GO:0072320) |
0.0 | 5.8 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.0 | 0.4 | GO:0031489 | myosin V binding(GO:0031489) |
0.0 | 9.2 | GO:0003712 | transcription cofactor activity(GO:0003712) |
0.0 | 0.3 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.0 | 2.8 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) ubiquitin-like protein ligase activity(GO:0061659) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.3 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
0.1 | 4.1 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 4.9 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 3.1 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 2.6 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 1.1 | PID FAS PATHWAY | FAS (CD95) signaling pathway |
0.0 | 1.6 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 1.2 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 0.4 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.1 | REACTOME NOD1 2 SIGNALING PATHWAY | Genes involved in NOD1/2 Signaling Pathway |
0.1 | 2.8 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.1 | 4.9 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.1 | 2.7 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.0 | 1.5 | REACTOME MRNA 3 END PROCESSING | Genes involved in mRNA 3'-end processing |
0.0 | 3.3 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.0 | 4.8 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 1.6 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 0.4 | REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER | Genes involved in RNA Polymerase III Transcription Initiation From Type 3 Promoter |