Project
averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
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Results for CGUGUCU
Z-value: 0.03
Motif logo
miRNA associated with seed CGUGUCU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-187-3p
|
MIMAT0000262 |
Activity profile of CGUGUCU motif
Sorted Z-values of CGUGUCU motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr4_+_124320665 | 0.10 |
ENST00000394339.2
|
SPRY1
|
sprouty homolog 1, antagonist of FGF signaling (Drosophila) |
| chr4_-_5894777 | 0.06 |
ENST00000324989.7
|
CRMP1
|
collapsin response mediator protein 1 |
| chr13_+_22245522 | 0.05 |
ENST00000382353.5
|
FGF9
|
fibroblast growth factor 9 |
| chr11_+_33278811 | 0.03 |
ENST00000303296.4
ENST00000379016.3 |
HIPK3
|
homeodomain interacting protein kinase 3 |
| chr11_+_129245796 | 0.03 |
ENST00000281437.4
|
BARX2
|
BARX homeobox 2 |
| chr4_-_113437328 | 0.02 |
ENST00000313341.3
|
NEUROG2
|
neurogenin 2 |
| chr12_+_68042495 | 0.01 |
ENST00000344096.3
|
DYRK2
|
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 |
| chr1_+_36348790 | 0.01 |
ENST00000373204.4
|
AGO1
|
argonaute RISC catalytic component 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of CGUGUCU
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0060940 | epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940) |
| 0.0 | 0.1 | GO:1904617 | negative regulation of actin filament binding(GO:1904530) negative regulation of actin binding(GO:1904617) |