averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GATA2 | hg19_v2_chr3_-_128206759_128206781 | -0.13 | 6.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_125366089 Show fit | 35.69 |
ENST00000366139.3
ENST00000278919.3 |
fasciculation and elongation protein zeta 1 (zygin I) |
|
chr11_-_111781554 Show fit | 34.11 |
ENST00000526167.1
ENST00000528961.1 |
crystallin, alpha B |
|
chr11_-_111794446 Show fit | 32.03 |
ENST00000527950.1
|
crystallin, alpha B |
|
chr3_+_111718173 Show fit | 30.40 |
ENST00000494932.1
|
transgelin 3 |
|
chr1_+_160085501 Show fit | 28.20 |
ENST00000361216.3
|
ATPase, Na+/K+ transporting, alpha 2 polypeptide |
|
chr11_-_111781610 Show fit | 27.15 |
ENST00000525823.1
|
crystallin, alpha B |
|
chr14_-_21945057 Show fit | 22.81 |
ENST00000397762.1
|
RAB2B, member RAS oncogene family |
|
chr11_-_5248294 Show fit | 22.56 |
ENST00000335295.4
|
hemoglobin, beta |
|
chrX_-_13956737 Show fit | 20.64 |
ENST00000454189.2
|
glycoprotein M6B |
|
chr12_-_91573132 Show fit | 20.53 |
ENST00000550563.1
ENST00000546370.1 |
decorin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 106.4 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
5.8 | 103.7 | GO:0007021 | tubulin complex assembly(GO:0007021) |
6.7 | 67.0 | GO:0051610 | negative regulation of neurotransmitter uptake(GO:0051581) serotonin uptake(GO:0051610) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612) |
5.4 | 64.4 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
1.3 | 37.2 | GO:1900273 | positive regulation of long-term synaptic potentiation(GO:1900273) |
5.9 | 35.7 | GO:1902902 | negative regulation of autophagosome assembly(GO:1902902) |
5.1 | 30.8 | GO:0061517 | macrophage proliferation(GO:0061517) microglial cell proliferation(GO:0061518) regulation of neuronal signal transduction(GO:1902847) positive regulation of neurofibrillary tangle assembly(GO:1902998) |
9.6 | 28.9 | GO:0098746 | fast, calcium ion-dependent exocytosis of neurotransmitter(GO:0098746) |
5.6 | 28.2 | GO:0051946 | regulation of amino acid uptake involved in synaptic transmission(GO:0051941) regulation of glutamate uptake involved in transmission of nerve impulse(GO:0051946) regulation of L-glutamate import(GO:1900920) |
0.8 | 23.8 | GO:0051131 | chaperone-mediated protein complex assembly(GO:0051131) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
7.0 | 112.7 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.3 | 77.4 | GO:0060076 | excitatory synapse(GO:0060076) |
0.0 | 72.5 | GO:0031226 | intrinsic component of plasma membrane(GO:0031226) |
0.8 | 66.9 | GO:0099501 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
4.6 | 64.4 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
4.2 | 50.7 | GO:0044327 | dendritic spine head(GO:0044327) |
0.3 | 41.1 | GO:0043204 | perikaryon(GO:0043204) |
0.1 | 36.9 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.0 | 36.1 | GO:0016021 | integral component of membrane(GO:0016021) |
0.1 | 36.0 | GO:0030424 | axon(GO:0030424) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.7 | 114.0 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
1.0 | 66.5 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 50.7 | GO:0005509 | calcium ion binding(GO:0005509) |
1.6 | 49.8 | GO:0043015 | gamma-tubulin binding(GO:0043015) |
1.7 | 38.4 | GO:0070300 | phosphatidic acid binding(GO:0070300) |
1.7 | 33.1 | GO:0051787 | misfolded protein binding(GO:0051787) |
0.1 | 29.1 | GO:0051015 | actin filament binding(GO:0051015) |
5.8 | 28.9 | GO:0030348 | syntaxin-3 binding(GO:0030348) |
2.0 | 28.1 | GO:1990239 | steroid hormone binding(GO:1990239) |
0.5 | 26.8 | GO:0019894 | kinesin binding(GO:0019894) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 65.2 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.8 | 46.6 | SIG CD40PATHWAYMAP | Genes related to CD40 signaling |
0.3 | 32.7 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.3 | 22.2 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.3 | 21.4 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.1 | 19.2 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 19.0 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.4 | 17.3 | PID REELIN PATHWAY | Reelin signaling pathway |
0.3 | 16.9 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.2 | 15.4 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.1 | 64.4 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.2 | 42.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
2.2 | 38.8 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.6 | 32.5 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.6 | 32.5 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.2 | 25.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 23.7 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.2 | 23.7 | REACTOME P75 NTR RECEPTOR MEDIATED SIGNALLING | Genes involved in p75 NTR receptor-mediated signalling |
1.3 | 22.8 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.6 | 19.1 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |