Project
averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
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Results for UGUGCGU
Z-value: 0.06
Motif logo
miRNA associated with seed UGUGCGU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-210-3p
|
MIMAT0000267 |
Activity profile of UGUGCGU motif
Sorted Z-values of UGUGCGU motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr8_+_27491572 | 0.36 |
ENST00000301904.3
|
SCARA3
|
scavenger receptor class A, member 3 |
| chr3_+_32147997 | 0.21 |
ENST00000282541.5
|
GPD1L
|
glycerol-3-phosphate dehydrogenase 1-like |
| chr7_-_10979750 | 0.16 |
ENST00000339600.5
|
NDUFA4
|
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa |
| chr5_-_132113036 | 0.15 |
ENST00000378706.1
|
SEPT8
|
septin 8 |
| chr1_+_155051305 | 0.09 |
ENST00000368408.3
|
EFNA3
|
ephrin-A3 |
| chr12_-_111021110 | 0.04 |
ENST00000354300.3
|
PPTC7
|
PTC7 protein phosphatase homolog (S. cerevisiae) |
| chr2_-_160472952 | 0.03 |
ENST00000541068.2
ENST00000355831.2 ENST00000343439.5 ENST00000392782.1 |
BAZ2B
|
bromodomain adjacent to zinc finger domain, 2B |
| chr20_-_48330377 | 0.03 |
ENST00000371711.4
|
B4GALT5
|
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 |
| chr2_+_85198216 | 0.02 |
ENST00000456682.1
ENST00000409785.4 |
KCMF1
|
potassium channel modulatory factor 1 |
| chr10_+_11206925 | 0.01 |
ENST00000354440.2
ENST00000315874.4 ENST00000427450.1 |
CELF2
|
CUGBP, Elav-like family member 2 |
| chr3_+_11314099 | 0.01 |
ENST00000446450.2
ENST00000354956.5 ENST00000354449.3 ENST00000419112.1 |
ATG7
|
autophagy related 7 |
| chr19_+_13135386 | 0.00 |
ENST00000360105.4
ENST00000588228.1 ENST00000591028.1 |
NFIX
|
nuclear factor I/X (CCAAT-binding transcription factor) |
| chr19_+_46800289 | 0.00 |
ENST00000377670.4
|
HIF3A
|
hypoxia inducible factor 3, alpha subunit |
Network of associatons between targets according to the STRING database.
First level regulatory network of UGUGCGU
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0006072 | glycerol-3-phosphate metabolic process(GO:0006072) negative regulation of protein kinase C signaling(GO:0090038) |
| 0.0 | 0.4 | GO:0009650 | UV protection(GO:0009650) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0009331 | glycerol-3-phosphate dehydrogenase complex(GO:0009331) |
| 0.0 | 0.2 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |