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averaged GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

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Results for UGUGCGU

Z-value: 0.06

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miRNA associated with seed UGUGCGU

NamemiRBASE accession
MIMAT0000267

Activity profile of UGUGCGU motif

Sorted Z-values of UGUGCGU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr8_+_27491572 0.36 ENST00000301904.3
scavenger receptor class A, member 3
chr3_+_32147997 0.21 ENST00000282541.5
glycerol-3-phosphate dehydrogenase 1-like
chr7_-_10979750 0.16 ENST00000339600.5
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
chr5_-_132113036 0.15 ENST00000378706.1
septin 8
chr1_+_155051305 0.09 ENST00000368408.3
ephrin-A3
chr12_-_111021110 0.04 ENST00000354300.3
PTC7 protein phosphatase homolog (S. cerevisiae)
chr2_-_160472952 0.03 ENST00000541068.2
ENST00000355831.2
ENST00000343439.5
ENST00000392782.1
bromodomain adjacent to zinc finger domain, 2B
chr20_-_48330377 0.03 ENST00000371711.4
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
chr2_+_85198216 0.02 ENST00000456682.1
ENST00000409785.4
potassium channel modulatory factor 1
chr10_+_11206925 0.01 ENST00000354440.2
ENST00000315874.4
ENST00000427450.1
CUGBP, Elav-like family member 2
chr3_+_11314099 0.01 ENST00000446450.2
ENST00000354956.5
ENST00000354449.3
ENST00000419112.1
autophagy related 7
chr19_+_13135386 0.00 ENST00000360105.4
ENST00000588228.1
ENST00000591028.1
nuclear factor I/X (CCAAT-binding transcription factor)
chr19_+_46800289 0.00 ENST00000377670.4
hypoxia inducible factor 3, alpha subunit

Network of associatons between targets according to the STRING database.

First level regulatory network of UGUGCGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0006072 glycerol-3-phosphate metabolic process(GO:0006072) negative regulation of protein kinase C signaling(GO:0090038)
0.0 0.4 GO:0009650 UV protection(GO:0009650)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.2 GO:0005751 mitochondrial respiratory chain complex IV(GO:0005751)