ISMARA results: CGUGUCU

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GNF SymAtlas + NCI-60 cancer cell lines, comparison of cancers vs non-cancers, human (Su, 2004; Ross, 2000)

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Results for CGUGUCU

Z-value: 0.01

Motif logo

miRNA associated with seed CGUGUCU

Name	miRBASE accession
hsa-miR-187-3p miRBase	MIMAT0000262

Activity profile of CGUGUCU motif

Sorted Z-values of CGUGUCU motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_124320665 Show fit	0.10	ENST00000394339.2	SPRY1 Ensembl NCBI GeneCards UniProt NextProt Show fit	sprouty homolog 1, antagonist of FGF signaling (Drosophila)
chr4_-_5894777 Show fit	0.06	ENST00000324989.7	CRMP1 Ensembl NCBI GeneCards UniProt NextProt Show fit	collapsin response mediator protein 1
chr13_+_22245522 Show fit	0.05	ENST00000382353.5	FGF9 Ensembl NCBI GeneCards UniProt NextProt Show fit	fibroblast growth factor 9
chr11_+_33278811 Show fit	0.03	ENST00000303296.4 ENST00000379016.3	HIPK3 Ensembl NCBI GeneCards UniProt NextProt Show fit	homeodomain interacting protein kinase 3
chr11_+_129245796 Show fit	0.03	ENST00000281437.4	BARX2 Ensembl NCBI GeneCards UniProt NextProt Show fit	BARX homeobox 2
chr4_-_113437328 Show fit	0.02	ENST00000313341.3	NEUROG2 Ensembl NCBI GeneCards UniProt NextProt Show fit	neurogenin 2
chr12_+_68042495 Show fit	0.01	ENST00000344096.3	DYRK2 Ensembl NCBI GeneCards UniProt NextProt Show fit	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr1_+_36348790 Show fit	0.01	ENST00000373204.4	AGO1 Ensembl NCBI GeneCards UniProt NextProt Show fit	argonaute RISC catalytic component 1

Showing 1 to 8 of 8 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of CGUGUCU

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0060940	epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940)
0.0	0.1	GO:1904617	negative regulation of actin filament binding(GO:1904530) negative regulation of actin binding(GO:1904617)

Showing 1 to 2 of 2 entries