Project
GNF SymAtlas + NCI-60 cancer cell lines, comparison of cancers vs non-cancers, human (Su, 2004; Ross, 2000)
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Results for UUUUUGC
Z-value: 0.08
Motif logo
miRNA associated with seed UUUUUGC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-129-5p
|
MIMAT0000242 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_20812690 Show fit | 1.00 |
ENST00000375078.3
|
calcium/calmodulin-dependent protein kinase II inhibitor 1 |
|
| chr14_-_51562745 Show fit | 0.17 |
ENST00000298355.3
|
tripartite motif containing 9 |
|
| chr4_-_153457197 Show fit | 0.16 |
ENST00000281708.4
|
F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase |
|
| chr22_+_40390930 Show fit | 0.12 |
ENST00000333407.6
|
family with sequence similarity 83, member F |
|
| chr17_-_27278304 Show fit | 0.11 |
ENST00000577226.1
|
PHD finger protein 12 |
|
| chr5_-_78809950 Show fit | 0.11 |
ENST00000334082.6
|
homer homolog 1 (Drosophila) |
|
| chr13_+_58206655 Show fit | 0.10 |
ENST00000377918.3
|
protocadherin 17 |
|
| chr9_-_14314066 Show fit | 0.10 |
ENST00000397575.3
|
nuclear factor I/B |
|
| chr8_+_42752053 Show fit | 0.10 |
ENST00000307602.4
|
hook microtubule-tethering protein 3 |
|
| chr3_+_181429704 Show fit | 0.06 |
ENST00000431565.2
ENST00000325404.1 |
SRY (sex determining region Y)-box 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of UUUUUGC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0031339 | negative regulation of vesicle fusion(GO:0031339) |
| 0.0 | 0.2 | GO:2000638 | regulation of SREBP signaling pathway(GO:2000638) negative regulation of SREBP signaling pathway(GO:2000639) |
| 0.0 | 0.1 | GO:0007206 | phospholipase C-activating G-protein coupled glutamate receptor signaling pathway(GO:0007206) |
| 0.0 | 0.1 | GO:0022027 | interkinetic nuclear migration(GO:0022027) |
| 0.0 | 0.1 | GO:2000807 | regulation of synaptic vesicle clustering(GO:2000807) |
| 0.0 | 0.1 | GO:0021730 | trigeminal sensory nucleus development(GO:0021730) principal sensory nucleus of trigeminal nerve development(GO:0021740) negative regulation of epithelial cell proliferation involved in lung morphogenesis(GO:2000795) |
| 0.0 | 0.1 | GO:0001714 | endodermal cell fate specification(GO:0001714) |
| 0.0 | 0.0 | GO:0031548 | regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031548) |
| 0.0 | 0.0 | GO:0006408 | snRNA export from nucleus(GO:0006408) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:1990452 | Parkin-FBXW7-Cul1 ubiquitin ligase complex(GO:1990452) |
| 0.0 | 0.1 | GO:0070695 | FHF complex(GO:0070695) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.0 | GO:0010858 | calcium-dependent protein kinase regulator activity(GO:0010858) |
| 0.0 | 0.2 | GO:0050816 | phosphothreonine binding(GO:0050816) |
| 0.0 | 0.0 | GO:0047275 | glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275) |