Project

GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

Navigation
Downloads

Results for ACCCGUA

Z-value: 0.05

Motif logo

logo of

miRNA associated with seed ACCCGUA

NamemiRBASE accession
hsa-miR-99a-5p
MIMAT0000097
hsa-miR-99b-5p
MIMAT0000689
hsa-miR-100-5p
MIMAT0000098

Activity profile of ACCCGUA motif

Sorted Z-values of ACCCGUA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr3_+_152017181 0.36 ENST00000498502.1
ENST00000324196.5
ENST00000545754.1
ENST00000357472.3
MBNL1
muscleblind-like splicing regulator 1
chr2_+_12857015 0.22 ENST00000155926.4
TRIB2
tribbles pseudokinase 2
chr8_+_126442563 0.18 ENST00000311922.3
TRIB1
tribbles pseudokinase 1
chr6_-_90121938 0.11 ENST00000369415.4
RRAGD
Ras-related GTP binding D
chr11_+_86748863 0.10 ENST00000340353.7
TMEM135
transmembrane protein 135
chr6_-_75994536 0.09 ENST00000475111.2
ENST00000230461.6
TMEM30A
transmembrane protein 30A
chr2_-_72375167 0.07 ENST00000001146.2
CYP26B1
cytochrome P450, family 26, subfamily B, polypeptide 1
chr2_+_28974668 0.04 ENST00000296122.6
ENST00000395366.2
PPP1CB
protein phosphatase 1, catalytic subunit, beta isozyme
chr4_+_144434584 0.04 ENST00000283131.3
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
chr22_+_30279144 0.04 ENST00000401950.2
ENST00000333027.3
ENST00000445401.1
ENST00000323630.5
ENST00000351488.3
MTMR3
myotubularin related protein 3
chr4_-_102268628 0.03 ENST00000323055.6
ENST00000512215.1
ENST00000394854.3
PPP3CA
protein phosphatase 3, catalytic subunit, alpha isozyme
chr2_+_86947296 0.02 ENST00000283632.4
RMND5A
required for meiotic nuclear division 5 homolog A (S. cerevisiae)
chr12_-_57030115 0.02 ENST00000379441.3
ENST00000179765.5
ENST00000551812.1
BAZ2A
bromodomain adjacent to zinc finger domain, 2A
chr2_-_208634287 0.02 ENST00000295417.3
FZD5
frizzled family receptor 5
chr7_-_27135591 0.01 ENST00000343060.4
ENST00000355633.5
HOXA1
homeobox A1
chr10_-_35930219 0.01 ENST00000374694.1
FZD8
frizzled family receptor 8
chr8_+_75736761 0.01 ENST00000260113.2
PI15
peptidase inhibitor 15

Network of associatons between targets according to the STRING database.

First level regulatory network of ACCCGUA

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0045659 regulation of eosinophil differentiation(GO:0045643) positive regulation of eosinophil differentiation(GO:0045645) regulation of neutrophil differentiation(GO:0045658) negative regulation of neutrophil differentiation(GO:0045659)
0.0 0.2 GO:0042091 interleukin-10 biosynthetic process(GO:0042091) regulation of interleukin-10 biosynthetic process(GO:0045074)
0.0 0.1 GO:0034653 diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653) skeletal muscle fiber differentiation(GO:0098528) regulation of skeletal muscle fiber differentiation(GO:1902809)
0.0 0.1 GO:0071233 cellular response to leucine(GO:0071233)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990131 EGO complex(GO:0034448) Gtr1-Gtr2 GTPase complex(GO:1990131)
0.0 0.0 GO:0031213 RSF complex(GO:0031213)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0001069 regulatory region RNA binding(GO:0001069)
0.0 0.4 GO:0055106 ubiquitin-protein transferase regulator activity(GO:0055106)