Project

GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)

Navigation
Downloads

Results for CACCUCC

Z-value: 0.10

Motif logo

miRNA associated with seed CACCUCC

NamemiRBASE accession
MIMAT0022726

Activity profile of CACCUCC motif

Sorted Z-values of CACCUCC motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_+_175792459 0.50 ENST00000310389.5
ADP-ribosylation factor-like 10
chr9_-_101471479 0.48 ENST00000259455.2
gamma-aminobutyric acid (GABA) B receptor, 2
chr1_+_46972668 0.45 ENST00000371956.4
ENST00000360032.3
diencephalon/mesencephalon homeobox 1
chr22_+_40390930 0.41 ENST00000333407.6
family with sequence similarity 83, member F
chr8_+_11141925 0.39 ENST00000221086.3
myotubularin related protein 9
chr11_-_45687128 0.36 ENST00000308064.2
carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
chr7_+_30951461 0.30 ENST00000311813.4
aquaporin 1 (Colton blood group)
chr1_+_19638788 0.29 ENST00000375155.3
ENST00000375153.3
ENST00000400548.2
PQ loop repeat containing 2
chr9_-_130829588 0.27 ENST00000373078.4
nuclear apoptosis inducing factor 1
chr11_-_64570706 0.23 ENST00000294066.2
ENST00000377350.3
mitogen-activated protein kinase kinase kinase kinase 2
chr14_-_77843390 0.22 ENST00000216468.7
transmembrane emp24 protein transport domain containing 8
chr22_-_44708731 0.20 ENST00000381176.4
KIAA1644
chr14_+_23775971 0.19 ENST00000250405.5
BCL2-like 2
chr20_+_42875887 0.17 ENST00000342560.5
ganglioside induced differentiation associated protein 1-like 1
chr19_+_1450112 0.17 ENST00000590469.1
ENST00000233607.2
ENST00000238483.4
ENST00000590877.1
adenomatosis polyposis coli 2
chr16_-_66584059 0.15 ENST00000417693.3
ENST00000544898.1
ENST00000569718.1
ENST00000527284.1
ENST00000299697.7
ENST00000451102.2
thymidine kinase 2, mitochondrial
chr9_-_123691047 0.14 ENST00000373887.3
TNF receptor-associated factor 1
chr6_-_30524951 0.13 ENST00000376621.3
guanine nucleotide binding protein-like 1
chr15_-_34502278 0.11 ENST00000559515.1
ENST00000256544.3
ENST00000560108.1
ENST00000559462.1
katanin p80 subunit B-like 1
chr2_-_25475120 0.10 ENST00000380746.4
ENST00000402667.1
DNA (cytosine-5-)-methyltransferase 3 alpha
chr8_+_56014949 0.09 ENST00000327381.6
XK, Kell blood group complex subunit-related family, member 4
chr2_-_169104651 0.08 ENST00000355999.4
serine threonine kinase 39
chr22_-_39268308 0.07 ENST00000407418.3
chromobox homolog 6
chr15_-_73661605 0.07 ENST00000261917.3
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
chr3_-_48471454 0.04 ENST00000296440.6
ENST00000448774.2
plexin B1
chr17_-_42298331 0.02 ENST00000343638.5
upstream binding transcription factor, RNA polymerase I
chr14_+_23790655 0.01 ENST00000397276.2
poly(A) binding protein, nuclear 1

Network of associatons between targets according to the STRING database.

First level regulatory network of CACCUCC

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0072019 carbon dioxide transmembrane transport(GO:0035378) proximal convoluted tubule development(GO:0072019) metanephric proximal convoluted tubule development(GO:0072229)
0.1 0.3 GO:1903401 L-lysine transmembrane transport(GO:1903401)
0.0 0.5 GO:0008343 adult feeding behavior(GO:0008343)
0.0 0.1 GO:0046104 thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.0 0.1 GO:0023016 signal transduction by trans-phosphorylation(GO:0023016) negative regulation of rubidium ion transport(GO:2000681) negative regulation of rubidium ion transmembrane transporter activity(GO:2000687)
0.0 0.4 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.1 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.1 GO:0060011 Sertoli cell proliferation(GO:0060011)
0.0 0.2 GO:0035414 negative regulation of catenin import into nucleus(GO:0035414)
0.0 0.0 GO:1900220 semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis(GO:1900220)
0.0 0.1 GO:0071321 cellular response to cGMP(GO:0071321)
0.0 0.5 GO:0007214 gamma-aminobutyric acid signaling pathway(GO:0007214)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0038039 G-protein coupled receptor heterodimeric complex(GO:0038039)
0.1 0.3 GO:0020005 symbiont-containing vacuole(GO:0020003) symbiont-containing vacuole membrane(GO:0020005)
0.0 0.2 GO:0016342 catenin complex(GO:0016342)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0004965 G-protein coupled GABA receptor activity(GO:0004965)
0.1 0.3 GO:0035379 carbon dioxide transmembrane transporter activity(GO:0035379)
0.1 0.3 GO:0015189 L-lysine transmembrane transporter activity(GO:0015189)
0.1 0.4 GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517)
0.0 0.1 GO:0004137 deoxycytidine kinase activity(GO:0004137) thymidine kinase activity(GO:0004797)
0.0 0.4 GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.1 GO:0005222 intracellular cAMP activated cation channel activity(GO:0005222)
0.0 0.2 GO:0008349 MAP kinase kinase kinase kinase activity(GO:0008349)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)
0.0 0.3 REACTOME PASSIVE TRANSPORT BY AQUAPORINS Genes involved in Passive Transport by Aquaporins
0.0 0.4 REACTOME KERATAN SULFATE BIOSYNTHESIS Genes involved in Keratan sulfate biosynthesis