GNF SymAtlas + NCI-60 cancer cell lines, human (Su, 2004; Ross, 2000)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
HDX
|
ENSG00000165259.9 | highly divergent homeobox |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_153363452 | 8.65 |
ENST00000368732.1
ENST00000368733.3 |
S100A8
|
S100 calcium binding protein A8 |
chr1_-_169680745 | 5.86 |
ENST00000236147.4
|
SELL
|
selectin L |
chr6_+_144471643 | 2.21 |
ENST00000367568.4
|
STX11
|
syntaxin 11 |
chr12_+_10460549 | 1.91 |
ENST00000543420.1
ENST00000543777.1 |
KLRD1
|
killer cell lectin-like receptor subfamily D, member 1 |
chr2_-_113594279 | 1.87 |
ENST00000416750.1
ENST00000418817.1 ENST00000263341.2 |
IL1B
|
interleukin 1, beta |
chr2_-_89399845 | 1.68 |
ENST00000479981.1
|
IGKV1-16
|
immunoglobulin kappa variable 1-16 |
chr12_+_10460417 | 1.63 |
ENST00000381908.3
ENST00000336164.4 ENST00000350274.5 |
KLRD1
|
killer cell lectin-like receptor subfamily D, member 1 |
chr6_+_42584847 | 1.52 |
ENST00000372883.3
|
UBR2
|
ubiquitin protein ligase E3 component n-recognin 2 |
chr1_+_84630053 | 1.43 |
ENST00000394838.2
ENST00000370682.3 ENST00000432111.1 |
PRKACB
|
protein kinase, cAMP-dependent, catalytic, beta |
chr18_+_29027696 | 1.27 |
ENST00000257189.4
|
DSG3
|
desmoglein 3 |
chr12_-_118797475 | 1.24 |
ENST00000541786.1
ENST00000419821.2 ENST00000541878.1 |
TAOK3
|
TAO kinase 3 |
chr1_+_21880560 | 1.22 |
ENST00000425315.2
|
ALPL
|
alkaline phosphatase, liver/bone/kidney |
chr3_+_54157480 | 1.22 |
ENST00000490478.1
|
CACNA2D3
|
calcium channel, voltage-dependent, alpha 2/delta subunit 3 |
chr5_-_41213607 | 0.89 |
ENST00000337836.5
ENST00000433294.1 |
C6
|
complement component 6 |
chr5_-_35230434 | 0.87 |
ENST00000504500.1
|
PRLR
|
prolactin receptor |
chr22_+_40440804 | 0.85 |
ENST00000441751.1
ENST00000301923.9 |
TNRC6B
|
trinucleotide repeat containing 6B |
chr2_-_40657397 | 0.82 |
ENST00000408028.2
ENST00000332839.4 ENST00000406391.2 ENST00000542024.1 ENST00000542756.1 ENST00000405901.3 |
SLC8A1
|
solute carrier family 8 (sodium/calcium exchanger), member 1 |
chr2_+_169926047 | 0.80 |
ENST00000428522.1
ENST00000450153.1 ENST00000421653.1 |
DHRS9
|
dehydrogenase/reductase (SDR family) member 9 |
chr5_-_135290705 | 0.71 |
ENST00000274507.1
|
LECT2
|
leukocyte cell-derived chemotaxin 2 |
chr13_+_97928395 | 0.55 |
ENST00000445661.2
|
MBNL2
|
muscleblind-like splicing regulator 2 |
chr7_-_135412925 | 0.42 |
ENST00000354042.4
|
SLC13A4
|
solute carrier family 13 (sodium/sulfate symporter), member 4 |
chr11_+_9685604 | 0.37 |
ENST00000447399.2
ENST00000318950.6 |
SWAP70
|
SWAP switching B-cell complex 70kDa subunit |
chr3_-_165555200 | 0.31 |
ENST00000479451.1
ENST00000540653.1 ENST00000488954.1 ENST00000264381.3 |
BCHE
|
butyrylcholinesterase |
chr14_+_79746249 | 0.24 |
ENST00000428277.2
|
NRXN3
|
neurexin 3 |
chr5_-_35230649 | 0.24 |
ENST00000382002.5
|
PRLR
|
prolactin receptor |
chr5_-_35230771 | 0.23 |
ENST00000342362.5
|
PRLR
|
prolactin receptor |
chr8_+_110098850 | 0.12 |
ENST00000518632.1
|
TRHR
|
thyrotropin-releasing hormone receptor |
chr8_+_24151620 | 0.05 |
ENST00000437154.2
|
ADAM28
|
ADAM metallopeptidase domain 28 |
chr14_+_79745682 | 0.03 |
ENST00000557594.1
|
NRXN3
|
neurexin 3 |
chr1_-_159684371 | 0.01 |
ENST00000255030.5
ENST00000437342.1 ENST00000368112.1 ENST00000368111.1 ENST00000368110.1 ENST00000343919.2 |
CRP
|
C-reactive protein, pentraxin-related |
chr14_+_79745746 | 0.01 |
ENST00000281127.7
|
NRXN3
|
neurexin 3 |
chr7_+_99954224 | 0.01 |
ENST00000608825.1
|
PILRB
|
paired immunoglobin-like type 2 receptor beta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 8.6 | GO:0032119 | sequestering of zinc ion(GO:0032119) |
0.6 | 1.9 | GO:0046136 | positive regulation of vitamin metabolic process(GO:0046136) positive regulation of vitamin D biosynthetic process(GO:0060557) positive regulation of calcidiol 1-monooxygenase activity(GO:0060559) |
0.4 | 1.2 | GO:0071529 | cementum mineralization(GO:0071529) |
0.3 | 1.4 | GO:0097338 | response to clozapine(GO:0097338) |
0.3 | 1.5 | GO:0071233 | cellular response to leucine(GO:0071233) |
0.2 | 1.3 | GO:0038161 | prolactin signaling pathway(GO:0038161) |
0.2 | 0.9 | GO:0001970 | positive regulation of activation of membrane attack complex(GO:0001970) |
0.2 | 6.7 | GO:0033198 | response to ATP(GO:0033198) |
0.1 | 0.4 | GO:1902309 | negative regulation of peptidyl-serine dephosphorylation(GO:1902309) |
0.1 | 2.2 | GO:0031629 | synaptic vesicle fusion to presynaptic active zone membrane(GO:0031629) vesicle fusion to plasma membrane(GO:0099500) |
0.1 | 0.3 | GO:0014016 | neuroblast differentiation(GO:0014016) |
0.1 | 0.8 | GO:0042905 | 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905) |
0.1 | 0.8 | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060213) |
0.0 | 1.2 | GO:0007095 | mitotic G2 DNA damage checkpoint(GO:0007095) |
0.0 | 3.5 | GO:0002228 | natural killer cell mediated immunity(GO:0002228) |
0.0 | 0.4 | GO:0008272 | sulfate transport(GO:0008272) |
0.0 | 0.3 | GO:0090129 | positive regulation of synapse maturation(GO:0090129) |
0.0 | 1.7 | GO:0030449 | regulation of complement activation(GO:0030449) |
0.0 | 1.3 | GO:0070268 | cornification(GO:0070268) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.2 | GO:0065010 | extracellular membrane-bounded organelle(GO:0065010) |
0.1 | 0.9 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 1.4 | GO:0005952 | cAMP-dependent protein kinase complex(GO:0005952) |
0.1 | 1.3 | GO:0030057 | desmosome(GO:0030057) |
0.0 | 8.6 | GO:0045111 | intermediate filament cytoskeleton(GO:0045111) |
0.0 | 2.2 | GO:0031201 | SNARE complex(GO:0031201) |
0.0 | 0.3 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.0 | 9.4 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 1.3 | GO:0031904 | endosome lumen(GO:0031904) |
0.0 | 0.8 | GO:0043198 | dendritic shaft(GO:0043198) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.9 | 8.6 | GO:0035662 | Toll-like receptor 4 binding(GO:0035662) |
0.8 | 5.9 | GO:0043208 | glycosphingolipid binding(GO:0043208) |
0.7 | 3.5 | GO:0023024 | MHC class I protein complex binding(GO:0023024) |
0.3 | 1.5 | GO:0070728 | leucine binding(GO:0070728) |
0.3 | 0.8 | GO:0099580 | ion antiporter activity involved in regulation of postsynaptic membrane potential(GO:0099580) |
0.3 | 1.3 | GO:0004925 | prolactin receptor activity(GO:0004925) |
0.2 | 1.2 | GO:0004035 | alkaline phosphatase activity(GO:0004035) |
0.1 | 1.4 | GO:0004691 | cAMP-dependent protein kinase activity(GO:0004691) |
0.1 | 0.8 | GO:0004022 | alcohol dehydrogenase (NAD) activity(GO:0004022) |
0.1 | 0.3 | GO:0003990 | acetylcholinesterase activity(GO:0003990) |
0.1 | 1.3 | GO:0005149 | interleukin-1 receptor binding(GO:0005149) |
0.1 | 0.4 | GO:0008271 | secondary active sulfate transmembrane transporter activity(GO:0008271) |
0.0 | 2.2 | GO:0005484 | SNAP receptor activity(GO:0005484) |
0.0 | 1.2 | GO:0004709 | MAP kinase kinase kinase activity(GO:0004709) |
0.0 | 0.3 | GO:0097109 | neuroligin family protein binding(GO:0097109) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 8.6 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.2 | 7.7 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 1.2 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 1.4 | PID IL3 PATHWAY | IL3-mediated signaling events |
0.0 | 1.3 | PID ERBB4 PATHWAY | ErbB4 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.4 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 2.2 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.1 | 1.3 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.1 | 1.3 | REACTOME PROLACTIN RECEPTOR SIGNALING | Genes involved in Prolactin receptor signaling |
0.0 | 1.4 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.0 | 1.9 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.0 | 0.8 | REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION | Genes involved in Pre-NOTCH Transcription and Translation |
0.0 | 0.8 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.0 | 0.3 | REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN | Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin |
0.0 | 0.9 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |