ISMARA results: ELK1,4

Motif ID: ELK1,4_GABP{A,B1}.p3

$logo of ELK1,4_GABP{A,B1}.p3$

Gene Symbol	Entrez ID	Gene Name
ELK1	2002	ELK1, member of ETS oncogene family
ELK4	2005	ELK4, ETS-domain protein (SRF accessory protein 1)
GABPA	2551	GA binding protein transcription factor, alpha subunit 60kDa
GABPB1	2553	GA binding protein transcription factor, beta subunit 1

Gene Symbol	Promoter	Pearson corr. coef.	p-value	Plot
GABPA	chr21_+_27107671	-0.51	9.1e-03	Click!
ELK1	chrX_-_47509864	0.34	9.9e-02	Click!
ELK4	chr1_-_205601999	-0.27	2.0e-01	Click!
GABPB1	chr15_-_50647275	0.08	7.0e-01	Click!

$activity profile for motif ELK1,4_GABP{A,B1}.p3$

$Sorted Z-values for motif ELK1,4_GABP{A,B1}.p3$

Search:

Show entries

Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr9_+_35732629	3.454		CREB3	cAMP responsive element binding protein 3
chr11_+_46722316	3.051	NM_024741	ZNF408	zinc finger protein 408
chr9_+_35732498	2.712		CREB3	cAMP responsive element binding protein 3
chr12_-_6798619	2.406	NM_001039920 NM_001135734	ZNF384	zinc finger protein 384
chr19_+_58694444	2.369		ZNF274	zinc finger protein 274
chr11_+_46722564	2.345	NM_001184751	ZNF408	zinc finger protein 408
chr9_+_35732207	2.311	NM_006368	CREB3	cAMP responsive element binding protein 3
chr12_-_6798528	2.276	NM_133476	ZNF384	zinc finger protein 384
chr9_-_123691442	2.111	NM_001190945	TRAF1	TNF receptor-associated factor 1
chr2_+_109745996	2.084	NM_001099289	SH3RF3	SH3 domain containing ring finger 3
chr21_-_30365111	2.058	NM_015565	LTN1	listerin E3 ubiquitin protein ligase 1
chr10_-_79789290	2.041	NM_007055	POLR3A	polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
chr16_+_31044849	2.027		STX4	syntaxin 4
chr16_+_31044881	1.993	NM_004604	STX4	syntaxin 4
chr1_+_101361688	1.953		SLC30A7	solute carrier family 30 (zinc transporter), member 7
chr19_+_58694381	1.813	NM_016324 NM_016325 NM_133502	ZNF274	zinc finger protein 274
chr6_-_32811773	1.736	NM_148919	PSMB8	proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7)
chr13_-_33760215	1.732	NM_001243466 NM_178007	STARD13	StAR-related lipid transfer (START) domain containing 13
chr19_+_38810461	1.728	NM_004823	KCNK6	potassium channel, subfamily K, member 6
chr1_-_38273823	1.726		YRDC	yrdC domain containing (E. coli)

Search:

Show entries

Showing 1 to 20 of 111 entries

enrichment	p-value	GO term	description
3.17	3.47e-02	GO:0007030	Golgi organization
2.85	1.64e-02	GO:0006903	vesicle targeting
2.56	2.83e-02	GO:0006888	ER to Golgi vesicle-mediated transport
2.38	1.38e-04	GO:0006353	transcription termination, DNA-dependent
2.34	2.55e-09	GO:0048193	Golgi vesicle transport
2.28	1.20e-03	GO:0007173	epidermal growth factor receptor signaling pathway
2.24	6.13e-07	GO:0042254	ribosome biogenesis
2.20	1.46e-02	GO:0072594	establishment of protein localization to organelle
2.19	8.18e-11	GO:0022613	ribonucleoprotein complex biogenesis
2.19	4.03e-03	GO:0006354	transcription elongation, DNA-dependent
2.13	4.70e-02	GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
2.12	3.34e-10	GO:0071843	cellular component biogenesis at cellular level
2.11	3.37e-03	GO:0006364	rRNA processing
2.09	1.15e-02	GO:0051351	positive regulation of ligase activity
2.09	2.78e-02	GO:0031123	RNA 3'-end processing
2.07	6.92e-09	GO:0000375	RNA splicing, via transesterification reactions
2.07	2.61e-02	GO:0051443	positive regulation of ubiquitin-protein ligase activity
2.05	3.24e-08	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
2.05	3.24e-08	GO:0000398	nuclear mRNA splicing, via spliceosome
2.05	6.28e-03	GO:0016072	rRNA metabolic process

Search:

Show entries

Showing 1 to 20 of 39 entries

enrichment	p-value	GO term	description
3.40	4.67e-02	GO:0030663	COPI coated vesicle membrane
3.31	5.00e-04	GO:0005689	U12-type spliceosomal complex
3.23	3.70e-04	GO:0044452	nucleolar part
2.92	5.01e-06	GO:0015030	Cajal body
2.38	6.96e-11	GO:0005681	spliceosomal complex
2.23	1.54e-03	GO:0030117	membrane coat
2.23	1.54e-03	GO:0048475	coated membrane
2.12	4.10e-02	GO:0016605	PML body
2.11	1.91e-03	GO:0071013	catalytic step 2 spliceosome
1.98	3.18e-09	GO:0016604	nuclear body
1.79	1.14e-14	GO:0030529	ribonucleoprotein complex
1.79	2.36e-14	GO:0005730	nucleolus
1.58	4.04e-11	GO:0044451	nucleoplasm part
1.53	5.16e-27	GO:0031981	nuclear lumen
1.51	1.22e-29	GO:0044428	nuclear part
1.49	1.14e-15	GO:0005654	nucleoplasm
1.46	1.18e-25	GO:0070013	intracellular organelle lumen
1.45	1.60e-24	GO:0043233	organelle lumen
1.44	7.51e-25	GO:0031974	membrane-enclosed lumen
1.31	2.95e-38	GO:0005634	nucleus

Search:

Show entries

Showing 1 to 17 of 17 entries

enrichment	p-value	GO term	description
2.82	1.78e-02	GO:0008173	RNA methyltransferase activity
2.00	1.76e-02	GO:0008135	translation factor activity, nucleic acid binding
1.82	3.79e-04	GO:0008168	methyltransferase activity
1.76	1.27e-03	GO:0016741	transferase activity, transferring one-carbon groups
1.59	1.49e-13	GO:0003723	RNA binding
1.38	3.98e-02	GO:0016874	ligase activity
1.29	1.28e-15	GO:0003676	nucleic acid binding
1.24	2.07e-05	GO:0008270	zinc ion binding
1.21	1.62e-04	GO:0000166	nucleotide binding
1.20	8.46e-03	GO:0035639	purine ribonucleoside triphosphate binding
1.19	2.56e-03	GO:0003677	DNA binding
1.19	1.81e-02	GO:0017076	purine nucleotide binding
1.19	2.18e-02	GO:0032553	ribonucleotide binding
1.19	2.18e-02	GO:0032555	purine ribonucleotide binding
1.18	3.78e-20	GO:0005515	protein binding
1.17	1.82e-02	GO:0046914	transition metal ion binding
1.10	5.47e-18	GO:0005488	binding