ISMARA results: RFX1..5_RFXANK

Motif ID: RFX1..5_RFXANK_RFXAP.p2

Gene Symbol	Entrez ID	Gene Name
RFX1	5989	regulatory factor X, 1 (influences HLA class II expression)
RFX2	5990	regulatory factor X, 2 (influences HLA class II expression)
RFX3	5991	regulatory factor X, 3 (influences HLA class II expression)
RFX4	5992	regulatory factor X, 4 (influences HLA class II expression)
RFX5	5993	regulatory factor X, 5 (influences HLA class II expression)
RFXANK	8625	regulatory factor X-associated ankyrin-containing protein
RFXAP	5994	regulatory factor X-associated protein

Gene Symbol	Promoter	Pearson corr. coef.	p-value	Plot
RFX1	chr19_-_14117096	0.50	1.1e-02	Click!
RFX2	chr19_-_6110491	0.38	6.5e-02	Click!
RFX4	chr12_+_106994914	0.35	9.0e-02	Click!
RFX5	chr1_-_151319717	-0.28	1.7e-01	Click!
RFX3	chr9_-_3525973	-0.23	2.7e-01	Click!
RFXANK	chr19_+_19303732, chr19_+_19303007	-0.16	4.4e-01	Click!
RFXAP	chr13_+_37393306	0.10	6.2e-01	Click!

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Promoter	Score	Refseq	Gene Symbol	Gene Name
chr5_-_149669187	2.335		CAMK2A	calcium/calmodulin-dependent protein kinase II alpha
chr5_-_149669400	2.009	NM_015981 NM_171825	CAMK2A	calcium/calmodulin-dependent protein kinase II alpha
chr5_-_179780314	1.886	NM_005110	GFPT2	glutamine-fructose-6-phosphate transaminase 2
chr22_+_23487512	1.639	NM_004914	RAB36	RAB36, member RAS oncogene family
chr3_-_123339423	1.550	NM_053031 NM_053032	MYLK	myosin light chain kinase
chr19_-_10679328	1.503		CDKN2D	cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
chr7_-_102715171	1.401	NM_001111038	FBXL13	F-box and leucine-rich repeat protein 13
chr1_-_36915969	1.359	NM_145047 NM_206837	OSCP1	organic solute carrier partner 1
chr13_-_44361032	1.299	NM_001242863 NM_017993	ENOX1	ecto-NOX disulfide-thiol exchanger 1
chr1_-_159869897	1.298	NM_012337	CCDC19	coiled-coil domain containing 19
chr14_-_24657986	1.266		IPO4	importin 4
chr8_+_13424351	1.245	NM_001007090	C8orf48	chromosome 8 open reading frame 48
chr3_+_154797435	1.228	NM_000902	MME	membrane metallo-endopeptidase
chr14_-_24658010	1.197	NM_024658	IPO4	importin 4
chr6_-_112408636	1.179	NM_016262	TUBE1	tubulin, epsilon 1
chr3_-_58563070	1.155		FAM107A	family with sequence similarity 107, member A
chr11_+_8060179	1.152	NM_003320	TUB	tubby homolog (mouse)
chr3_-_123339178	1.133		MYLK	myosin light chain kinase
chr16_+_57050985	1.103	NM_032206	NLRC5	NLR family, CARD domain containing 5
chr6_+_109762204	1.080		SMPD2	sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)

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enrichment	p-value	GO term	description
2.50	1.29e-02	GO:0007017	microtubule-based process

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enrichment	p-value	GO term	description
7.06	5.27e-06	GO:0035085	cilium axoneme
6.91	1.35e-08	GO:0005930	axoneme
5.69	7.46e-04	GO:0005932	microtubule basal body
5.56	5.39e-06	GO:0044441	cilium part
4.84	1.02e-02	GO:0019861	flagellum
4.07	1.62e-08	GO:0005929	cilium
3.32	2.61e-02	GO:0005875	microtubule associated complex
3.11	1.06e-07	GO:0005874	microtubule
2.61	2.36e-05	GO:0005815	microtubule organizing center
2.54	6.46e-03	GO:0005813	centrosome
2.38	9.74e-09	GO:0015630	microtubule cytoskeleton
2.06	1.31e-02	GO:0044463	cell projection part
1.65	5.34e-03	GO:0044430	cytoskeletal part
1.55	2.57e-03	GO:0005856	cytoskeleton
1.33	3.60e-02	GO:0043228	non-membrane-bounded organelle
1.33	3.60e-02	GO:0043232	intracellular non-membrane-bounded organelle
1.24	3.37e-03	GO:0044422	organelle part
1.23	1.08e-02	GO:0044446	intracellular organelle part
1.18	8.35e-04	GO:0005737	cytoplasm
1.14	8.69e-03	GO:0043226	organelle

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enrichment	p-value	GO term	description
5.99	4.62e-02	GO:0003887	DNA-directed DNA polymerase activity
3.06	4.49e-02	GO:0016779	nucleotidyltransferase activity