ISMARA results: RXR{A,B,G}.p2

Motif ID: RXR{A,B,G}.p2

Gene Symbol	Promoter	Pearson corr. coef.	p-value	Plot
RXRA	chr9_+_137218324	0.49	1.4e-02	Click!
RXRB	chr6_-_33168448	0.25	2.3e-01	Click!
RXRG	chr1_-_165414499	-0.14	5.2e-01	Click!

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr14_-_35873823	1.965	NM_020529	NFKBIA	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
chr11_+_73087670	1.412	NM_032871	RELT	RELT tumor necrosis factor receptor
chr6_+_14118002	1.405		CD83	CD83 molecule
chr19_-_1174201	1.359
chr19_-_1174263	1.339	NM_014963	SBNO2	strawberry notch homolog 2 (Drosophila)
chr2_+_27301693	1.184		EMILIN1	elastin microfibril interfacer 1
chr4_-_38666429	1.090		FLJ13197	uncharacterized FLJ13197
chr17_+_36861857	1.073	NM_005937	MLLT6	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
chr12_-_109251333	1.054	NM_001161330 NM_018984	SSH1	slingshot homolog 1 (Drosophila)
chr19_-_50432647	1.051		IL4I1	interleukin 4 induced 1
chr19_-_50432672	1.049		IL4I1	interleukin 4 induced 1
chr19_-_1174257	1.028		SBNO2	strawberry notch homolog 2 (Drosophila)
chr7_+_143078399	0.999		ZYX	zyxin
chr19_+_50354417	0.998		PTOV1	prostate tumor overexpressed 1
chr19_+_10381516	0.977	NM_000201	ICAM1	intercellular adhesion molecule 1
chr19_+_50354368	0.976	NM_017432	PTOV1	prostate tumor overexpressed 1
chr19_+_17830302	0.932	NM_018174	MAP1S	microtubule-associated protein 1S
chr19_+_45251933	0.923	NM_005178	BCL3	B-cell CLL/lymphoma 3
chr9_-_110251308	0.922		KLF4	Kruppel-like factor 4 (gut)
chr9_-_110251754	0.918		KLF4	Kruppel-like factor 4 (gut)

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Showing 1 to 20 of 28 entries

enrichment	p-value	GO term	description
4.17	8.76e-03	GO:0043535	regulation of blood vessel endothelial cell migration
1.69	3.21e-03	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
1.60	2.75e-03	GO:2000113	negative regulation of cellular macromolecule biosynthetic process
1.60	3.13e-03	GO:0010629	negative regulation of gene expression
1.59	1.51e-02	GO:0051253	negative regulation of RNA metabolic process
1.59	2.06e-02	GO:0045892	negative regulation of transcription, DNA-dependent
1.58	1.98e-03	GO:0031327	negative regulation of cellular biosynthetic process
1.58	2.45e-03	GO:0010558	negative regulation of macromolecule biosynthetic process
1.54	5.67e-03	GO:0009890	negative regulation of biosynthetic process
1.53	3.29e-02	GO:0045934	negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.52	1.93e-02	GO:0010628	positive regulation of gene expression
1.52	3.84e-02	GO:0045893	positive regulation of transcription, DNA-dependent
1.51	2.20e-04	GO:0006357	regulation of transcription from RNA polymerase II promoter
1.48	4.03e-03	GO:0010605	negative regulation of macromolecule metabolic process
1.45	4.44e-03	GO:0009892	negative regulation of metabolic process
1.45	1.52e-02	GO:0031324	negative regulation of cellular metabolic process
1.43	5.34e-03	GO:0010646	regulation of cell communication
1.39	1.37e-03	GO:0009966	regulation of signal transduction
1.35	2.50e-03	GO:0023051	regulation of signaling
1.33	1.40e-03	GO:0048583	regulation of response to stimulus

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Showing 1 to 7 of 7 entries

enrichment	p-value	GO term	description
1.11	5.56e-04	GO:0005737	cytoplasm
1.10	2.35e-03	GO:0043231	intracellular membrane-bounded organelle
1.10	2.37e-03	GO:0043227	membrane-bounded organelle
1.08	3.75e-02	GO:0043226	organelle
1.08	3.87e-02	GO:0043229	intracellular organelle
1.07	5.35e-03	GO:0044424	intracellular part
1.07	6.85e-03	GO:0005622	intracellular

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Showing 1 to 2 of 2 entries

enrichment	p-value	GO term	description
1.19	8.54e-11	GO:0005515	protein binding
1.08	1.61e-05	GO:0005488	binding