Inflammatory response time course, HUVEC (Wada et al., 2009)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ALX1 | hg19_v2_chr12_+_85673868_85673885 | -0.15 | 4.8e-01 | Click! |
ARX | hg19_v2_chrX_-_25034065_25034088 | -0.00 | 9.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_95236551 Show fit | 0.47 |
ENST00000238558.3
|
goosecoid homeobox |
|
chr17_+_39261584 Show fit | 0.45 |
ENST00000391415.1
|
keratin associated protein 4-9 |
|
chr6_-_134639180 Show fit | 0.44 |
ENST00000367858.5
|
serum/glucocorticoid regulated kinase 1 |
|
chr2_+_162272605 Show fit | 0.37 |
ENST00000389554.3
|
T-box, brain, 1 |
|
chr6_-_27835357 Show fit | 0.35 |
ENST00000331442.3
|
histone cluster 1, H1b |
|
chrX_+_38211777 Show fit | 0.32 |
ENST00000039007.4
|
ornithine carbamoyltransferase |
|
chr6_+_34204642 Show fit | 0.29 |
ENST00000347617.6
ENST00000401473.3 ENST00000311487.5 ENST00000447654.1 ENST00000395004.3 |
high mobility group AT-hook 1 |
|
chr10_-_31146615 Show fit | 0.29 |
ENST00000444692.2
|
zinc finger protein 438 |
|
chr3_-_164914640 Show fit | 0.28 |
ENST00000241274.3
|
SLIT and NTRK-like family, member 3 |
|
chr11_+_55029628 Show fit | 0.26 |
ENST00000417545.2
|
tripartite motif containing 48 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.5 | GO:0014034 | neural crest cell fate commitment(GO:0014034) |
0.1 | 0.4 | GO:0021764 | amygdala development(GO:0021764) |
0.0 | 0.4 | GO:0070294 | renal sodium ion absorption(GO:0070294) |
0.0 | 0.4 | GO:0045636 | positive regulation of melanocyte differentiation(GO:0045636) |
0.1 | 0.3 | GO:0042450 | arginine biosynthetic process via ornithine(GO:0042450) response to biotin(GO:0070781) |
0.1 | 0.3 | GO:0090402 | oncogene-induced cell senescence(GO:0090402) |
0.0 | 0.3 | GO:0071169 | establishment of protein localization to chromatin(GO:0071169) |
0.0 | 0.3 | GO:0007095 | mitotic G2 DNA damage checkpoint(GO:0007095) |
0.1 | 0.2 | GO:0010430 | fatty acid omega-oxidation(GO:0010430) |
0.0 | 0.2 | GO:0051694 | pointed-end actin filament capping(GO:0051694) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0035985 | senescence-associated heterochromatin focus(GO:0035985) |
0.0 | 0.2 | GO:0000308 | cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308) |
0.0 | 0.1 | GO:1990032 | parallel fiber(GO:1990032) |
0.0 | 0.1 | GO:0034669 | integrin alpha4-beta7 complex(GO:0034669) |
0.0 | 0.1 | GO:0042720 | mitochondrial inner membrane peptidase complex(GO:0042720) |
0.0 | 0.1 | GO:0044530 | supraspliceosomal complex(GO:0044530) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0001103 | RNA polymerase II repressing transcription factor binding(GO:0001103) |
0.0 | 0.4 | GO:0017081 | chloride channel regulator activity(GO:0017081) |
0.0 | 0.3 | GO:0042301 | phosphate ion binding(GO:0042301) |
0.0 | 0.3 | GO:0042975 | peroxisome proliferator activated receptor binding(GO:0042975) |
0.1 | 0.2 | GO:0004031 | aldehyde oxidase activity(GO:0004031) |
0.0 | 0.1 | GO:0031731 | CCR6 chemokine receptor binding(GO:0031731) |
0.0 | 0.1 | GO:0008532 | N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532) |
0.0 | 0.1 | GO:0003726 | double-stranded RNA adenosine deaminase activity(GO:0003726) |
0.0 | 0.1 | GO:0017161 | phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316) inositol-1,3,4-trisphosphate 4-phosphatase activity(GO:0017161) inositol-3,4-bisphosphate 4-phosphatase activity(GO:0052828) |
0.0 | 0.1 | GO:0017159 | pantetheine hydrolase activity(GO:0017159) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |
0.0 | 0.3 | REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION | Genes involved in APOBEC3G mediated resistance to HIV-1 infection |
0.0 | 0.2 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |