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Inflammatory response time course, HUVEC (Wada et al., 2009)

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Results for AUGUGCC

Z-value: 0.20

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miRNA associated with seed AUGUGCC

NamemiRBASE accession
hsa-miR-455-5p
MIMAT0003150

Activity profile of AUGUGCC motif

Sorted Z-values of AUGUGCC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr10_-_105615164 0.34 ENST00000355946.2
ENST00000369774.4
SH3PXD2A
SH3 and PX domains 2A
chr8_+_106330920 0.16 ENST00000407775.2
ZFPM2
zinc finger protein, FOG family member 2
chr4_-_185395672 0.15 ENST00000393593.3
IRF2
interferon regulatory factor 2
chr5_-_76788317 0.13 ENST00000296679.4
WDR41
WD repeat domain 41
chr12_+_62654119 0.11 ENST00000353364.3
ENST00000549523.1
ENST00000280377.5
USP15
ubiquitin specific peptidase 15
chr18_-_74207146 0.11 ENST00000443185.2
ZNF516
zinc finger protein 516
chr9_-_91793675 0.10 ENST00000375835.4
ENST00000375830.1
SHC3
SHC (Src homology 2 domain containing) transforming protein 3
chr12_+_104458235 0.10 ENST00000229330.4
HCFC2
host cell factor C2
chr7_+_39989611 0.09 ENST00000181839.4
CDK13
cyclin-dependent kinase 13
chr2_+_60983361 0.09 ENST00000238714.3
PAPOLG
poly(A) polymerase gamma
chr17_-_5389477 0.07 ENST00000572834.1
ENST00000570848.1
ENST00000571971.1
ENST00000158771.4
DERL2
derlin 2
chr10_+_27793197 0.06 ENST00000356940.6
ENST00000535776.1
RAB18
RAB18, member RAS oncogene family
chr4_+_39699664 0.06 ENST00000261427.5
ENST00000510934.1
ENST00000295963.6
UBE2K
ubiquitin-conjugating enzyme E2K
chr17_-_27278304 0.06 ENST00000577226.1
PHF12
PHD finger protein 12
chr2_-_202316260 0.05 ENST00000332624.3
TRAK2
trafficking protein, kinesin binding 2
chr17_+_27717415 0.05 ENST00000583121.1
ENST00000261716.3
TAOK1
TAO kinase 1
chr5_-_160973649 0.05 ENST00000393959.1
ENST00000517547.1
GABRB2
gamma-aminobutyric acid (GABA) A receptor, beta 2
chr1_+_193091080 0.05 ENST00000367435.3
CDC73
cell division cycle 73
chr9_+_95087766 0.05 ENST00000375587.3
CENPP
centromere protein P
chr11_-_59436453 0.05 ENST00000300146.9
PATL1
protein associated with topoisomerase II homolog 1 (yeast)
chr12_+_124069070 0.05 ENST00000262225.3
ENST00000438031.2
TMED2
transmembrane emp24 domain trafficking protein 2
chr11_-_128392085 0.05 ENST00000526145.2
ENST00000531611.1
ENST00000319397.6
ENST00000345075.4
ENST00000535549.1
ETS1
v-ets avian erythroblastosis virus E26 oncogene homolog 1
chr6_+_45389893 0.04 ENST00000371432.3
RUNX2
runt-related transcription factor 2
chr18_+_63418068 0.04 ENST00000397968.2
CDH7
cadherin 7, type 2
chr12_+_2162447 0.04 ENST00000335762.5
ENST00000399655.1
CACNA1C
calcium channel, voltage-dependent, L type, alpha 1C subunit
chr14_+_33408449 0.04 ENST00000346562.2
ENST00000341321.4
ENST00000548645.1
ENST00000356141.4
ENST00000357798.5
NPAS3
neuronal PAS domain protein 3
chr12_+_12870055 0.04 ENST00000228872.4
CDKN1B
cyclin-dependent kinase inhibitor 1B (p27, Kip1)
chr13_-_50367057 0.04 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr10_+_112679301 0.04 ENST00000265277.5
ENST00000369452.4
SHOC2
soc-2 suppressor of clear homolog (C. elegans)
chr6_+_87865262 0.04 ENST00000369577.3
ENST00000518845.1
ENST00000339907.4
ENST00000496806.2
ZNF292
zinc finger protein 292
chr2_+_106361333 0.04 ENST00000233154.4
ENST00000451463.2
NCK2
NCK adaptor protein 2
chr3_-_176914238 0.04 ENST00000430069.1
ENST00000428970.1
TBL1XR1
transducin (beta)-like 1 X-linked receptor 1
chr21_-_16437255 0.04 ENST00000400199.1
ENST00000400202.1
NRIP1
nuclear receptor interacting protein 1
chr19_-_33166045 0.04 ENST00000586693.3
ENST00000587352.1
ENST00000586463.1
ENST00000306065.4
ANKRD27
ankyrin repeat domain 27 (VPS9 domain)
chr17_-_42908155 0.04 ENST00000426548.1
ENST00000590758.1
ENST00000591424.1
GJC1
gap junction protein, gamma 1, 45kDa
chr17_+_57642886 0.03 ENST00000251241.4
ENST00000451169.2
ENST00000425628.3
ENST00000584385.1
ENST00000580030.1
DHX40
DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr20_+_34894247 0.03 ENST00000373913.3
DLGAP4
discs, large (Drosophila) homolog-associated protein 4
chr5_+_173315283 0.03 ENST00000265085.5
CPEB4
cytoplasmic polyadenylation element binding protein 4
chr19_-_5978090 0.03 ENST00000592621.1
ENST00000034275.8
ENST00000591092.1
ENST00000591333.1
ENST00000590623.1
ENST00000439268.2
ENST00000587159.1
RANBP3
RAN binding protein 3
chr11_-_57092381 0.03 ENST00000358252.3
TNKS1BP1
tankyrase 1 binding protein 1, 182kDa
chr15_+_59279851 0.03 ENST00000348370.4
ENST00000434298.1
ENST00000559160.1
RNF111
ring finger protein 111
chr4_+_62066941 0.03 ENST00000512091.2
LPHN3
latrophilin 3
chr5_-_132073210 0.03 ENST00000378735.1
ENST00000378746.4
KIF3A
kinesin family member 3A
chr22_+_39077947 0.03 ENST00000216034.4
TOMM22
translocase of outer mitochondrial membrane 22 homolog (yeast)
chr10_-_94003003 0.03 ENST00000412050.4
CPEB3
cytoplasmic polyadenylation element binding protein 3
chr1_-_217262969 0.03 ENST00000361525.3
ESRRG
estrogen-related receptor gamma
chr1_-_10856694 0.03 ENST00000377022.3
ENST00000344008.5
CASZ1
castor zinc finger 1
chr8_-_82024290 0.03 ENST00000220597.4
PAG1
phosphoprotein associated with glycosphingolipid microdomains 1
chr4_-_170924888 0.02 ENST00000502832.1
ENST00000393704.3
MFAP3L
microfibrillar-associated protein 3-like
chr4_+_7194247 0.02 ENST00000507866.2
SORCS2
sortilin-related VPS10 domain containing receptor 2
chr2_-_152955537 0.02 ENST00000201943.5
ENST00000539935.1
CACNB4
calcium channel, voltage-dependent, beta 4 subunit
chr17_-_46682321 0.02 ENST00000225648.3
ENST00000484302.2
HOXB6
homeobox B6
chr8_+_61429416 0.02 ENST00000262646.7
ENST00000531289.1
RAB2A
RAB2A, member RAS oncogene family
chrX_+_41192595 0.02 ENST00000399959.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr18_+_43914159 0.02 ENST00000588679.1
ENST00000269439.7
ENST00000543885.1
RNF165
ring finger protein 165
chr7_-_155604967 0.02 ENST00000297261.2
SHH
sonic hedgehog
chr14_-_21737610 0.02 ENST00000320084.7
ENST00000449098.1
ENST00000336053.6
HNRNPC
heterogeneous nuclear ribonucleoprotein C (C1/C2)
chr5_+_82767284 0.02 ENST00000265077.3
VCAN
versican
chr6_-_146135880 0.02 ENST00000237281.4
FBXO30
F-box protein 30
chrX_+_12156582 0.02 ENST00000380682.1
FRMPD4
FERM and PDZ domain containing 4
chr11_+_9406169 0.02 ENST00000379719.3
ENST00000527431.1
IPO7
importin 7
chr4_+_41937131 0.02 ENST00000504986.1
ENST00000508448.1
ENST00000513702.1
ENST00000325094.5
TMEM33
transmembrane protein 33
chr20_-_48770174 0.02 ENST00000341698.2
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough
chr17_+_30264014 0.02 ENST00000322652.5
ENST00000580398.1
SUZ12
SUZ12 polycomb repressive complex 2 subunit
chr20_-_48770244 0.02 ENST00000371650.5
ENST00000371652.4
ENST00000557021.1
TMEM189
transmembrane protein 189
chr12_+_113659234 0.02 ENST00000551096.1
ENST00000551099.1
ENST00000335509.6
ENST00000552897.1
ENST00000550785.1
ENST00000549279.1
TPCN1
two pore segment channel 1
chr2_-_213403565 0.01 ENST00000342788.4
ENST00000436443.1
ERBB4
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
chr5_-_158526756 0.01 ENST00000313708.6
ENST00000517373.1
EBF1
early B-cell factor 1
chr1_-_70671216 0.01 ENST00000370952.3
LRRC40
leucine rich repeat containing 40
chr1_-_115053781 0.01 ENST00000358465.2
ENST00000369543.2
TRIM33
tripartite motif containing 33
chr15_-_56535464 0.01 ENST00000559447.2
ENST00000422057.1
ENST00000317318.6
ENST00000423270.1
RFX7
regulatory factor X, 7
chr14_-_69619823 0.01 ENST00000341516.5
DCAF5
DDB1 and CUL4 associated factor 5
chr6_+_151186554 0.01 ENST00000367321.3
ENST00000367307.4
MTHFD1L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr8_+_75736761 0.01 ENST00000260113.2
PI15
peptidase inhibitor 15
chr5_+_143584814 0.01 ENST00000507359.3
KCTD16
potassium channel tetramerization domain containing 16
chr12_-_100536608 0.01 ENST00000356828.3
ENST00000279907.7
UHRF1BP1L
UHRF1 binding protein 1-like
chr20_-_60640866 0.01 ENST00000252996.4
TAF4
TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
chr1_+_36771946 0.01 ENST00000373139.2
ENST00000453908.2
ENST00000426732.2
SH3D21
SH3 domain containing 21
chr1_+_22889953 0.01 ENST00000374644.4
ENST00000166244.3
ENST00000538803.1
EPHA8
EPH receptor A8
chr13_-_52027134 0.01 ENST00000311234.4
ENST00000425000.1
ENST00000463928.1
ENST00000442263.3
ENST00000398119.2
INTS6
integrator complex subunit 6
chr8_-_8751068 0.01 ENST00000276282.6
MFHAS1
malignant fibrous histiocytoma amplified sequence 1
chr10_-_15762124 0.00 ENST00000378076.3
ITGA8
integrin, alpha 8
chrX_+_40944871 0.00 ENST00000378308.2
ENST00000324545.8
USP9X
ubiquitin specific peptidase 9, X-linked
chr4_-_48908805 0.00 ENST00000273860.4
OCIAD2
OCIA domain containing 2
chr12_-_94853716 0.00 ENST00000339839.5
ENST00000397809.5
ENST00000547575.1
CCDC41
coiled-coil domain containing 41
chr17_+_48796905 0.00 ENST00000505658.1
ENST00000393227.2
ENST00000240304.1
ENST00000311571.3
ENST00000505619.1
ENST00000544170.1
ENST00000510984.1
LUC7L3
LUC7-like 3 (S. cerevisiae)
chr5_+_102455853 0.00 ENST00000515845.1
ENST00000321521.9
ENST00000507921.1
PPIP5K2
diphosphoinositol pentakisphosphate kinase 2
chr20_-_43438912 0.00 ENST00000541604.2
ENST00000372851.3
RIMS4
regulating synaptic membrane exocytosis 4
chr1_-_204329013 0.00 ENST00000272203.3
ENST00000414478.1
PLEKHA6
pleckstrin homology domain containing, family A member 6
chr12_+_94542459 0.00 ENST00000258526.4
PLXNC1
plexin C1

Network of associatons between targets according to the STRING database.

First level regulatory network of AUGUGCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0072674 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.1 0.2 GO:0003221 right ventricular cardiac muscle tissue morphogenesis(GO:0003221)
0.0 0.1 GO:0035616 histone H2B conserved C-terminal lysine deubiquitination(GO:0035616)
0.0 0.1 GO:0098937 dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937)
0.0 0.0 GO:0035544 negative regulation of SNARE complex assembly(GO:0035544)
0.0 0.0 GO:0048200 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0002945 cyclin K-CDK13 complex(GO:0002945)
0.0 0.1 GO:1990316 ATG1/ULK1 kinase complex(GO:1990316)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0016176 superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0 0.1 GO:0061649 ubiquitinated histone binding(GO:0061649)