Project
Inflammatory response time course, HUVEC (Wada et al., 2009)
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Results for AUGUGCC
Z-value: 0.20
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miRNA associated with seed AUGUGCC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-455-5p
|
MIMAT0003150 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr10_-_105615164 Show fit | 0.34 |
ENST00000355946.2
ENST00000369774.4 |
SH3 and PX domains 2A |
|
| chr8_+_106330920 Show fit | 0.16 |
ENST00000407775.2
|
zinc finger protein, FOG family member 2 |
|
| chr4_-_185395672 Show fit | 0.15 |
ENST00000393593.3
|
interferon regulatory factor 2 |
|
| chr5_-_76788317 Show fit | 0.13 |
ENST00000296679.4
|
WD repeat domain 41 |
|
| chr12_+_62654119 Show fit | 0.11 |
ENST00000353364.3
ENST00000549523.1 ENST00000280377.5 |
ubiquitin specific peptidase 15 |
|
| chr18_-_74207146 Show fit | 0.11 |
ENST00000443185.2
|
zinc finger protein 516 |
|
| chr9_-_91793675 Show fit | 0.10 |
ENST00000375835.4
ENST00000375830.1 |
SHC (Src homology 2 domain containing) transforming protein 3 |
|
| chr12_+_104458235 Show fit | 0.10 |
ENST00000229330.4
|
host cell factor C2 |
|
| chr7_+_39989611 Show fit | 0.09 |
ENST00000181839.4
|
cyclin-dependent kinase 13 |
|
| chr2_+_60983361 Show fit | 0.09 |
ENST00000238714.3
|
poly(A) polymerase gamma |
Network of associatons between targets according to the STRING database.
First level regulatory network of AUGUGCC
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.3 | GO:0072674 | multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675) |
| 0.1 | 0.2 | GO:0003221 | right ventricular cardiac muscle tissue morphogenesis(GO:0003221) |
| 0.0 | 0.1 | GO:0035616 | histone H2B conserved C-terminal lysine deubiquitination(GO:0035616) |
| 0.0 | 0.1 | GO:0098937 | dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937) |
| 0.0 | 0.0 | GO:0035544 | negative regulation of SNARE complex assembly(GO:0035544) |
| 0.0 | 0.0 | GO:0048200 | COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0002945 | cyclin K-CDK13 complex(GO:0002945) |
| 0.0 | 0.1 | GO:1990316 | ATG1/ULK1 kinase complex(GO:1990316) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
| 0.0 | 0.1 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |