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Inflammatory response time course, HUVEC (Wada et al., 2009)
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Results for CACCUCC
Z-value: 0.08
Motif logo
miRNA associated with seed CACCUCC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-1306-5p
|
MIMAT0022726 |
Activity profile of CACCUCC motif
Sorted Z-values of CACCUCC motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr9_-_123691047 | 0.10 |
ENST00000373887.3
|
TRAF1
|
TNF receptor-associated factor 1 |
| chr11_+_73087309 | 0.04 |
ENST00000064780.2
ENST00000545687.1 |
RELT
|
RELT tumor necrosis factor receptor |
| chr11_-_45687128 | 0.03 |
ENST00000308064.2
|
CHST1
|
carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 |
| chr6_+_30539153 | 0.02 |
ENST00000326195.8
ENST00000376545.3 ENST00000396515.4 ENST00000441867.1 ENST00000468958.1 |
ABCF1
|
ATP-binding cassette, sub-family F (GCN20), member 1 |
| chr11_-_65430251 | 0.02 |
ENST00000534283.1
ENST00000527749.1 ENST00000533187.1 ENST00000525693.1 ENST00000534558.1 ENST00000532879.1 ENST00000532999.1 |
RELA
|
v-rel avian reticuloendotheliosis viral oncogene homolog A |
| chr13_-_44735393 | 0.02 |
ENST00000400419.1
|
SMIM2
|
small integral membrane protein 2 |
| chr8_+_11141925 | 0.02 |
ENST00000221086.3
|
MTMR9
|
myotubularin related protein 9 |
| chr15_+_64680003 | 0.01 |
ENST00000261884.3
|
TRIP4
|
thyroid hormone receptor interactor 4 |
| chr8_+_61591337 | 0.01 |
ENST00000423902.2
|
CHD7
|
chromodomain helicase DNA binding protein 7 |
| chr22_-_39268308 | 0.01 |
ENST00000407418.3
|
CBX6
|
chromobox homolog 6 |
| chr5_+_175792459 | 0.01 |
ENST00000310389.5
|
ARL10
|
ADP-ribosylation factor-like 10 |
| chr2_-_25475120 | 0.01 |
ENST00000380746.4
ENST00000402667.1 |
DNMT3A
|
DNA (cytosine-5-)-methyltransferase 3 alpha |
| chr2_-_153574480 | 0.01 |
ENST00000410080.1
|
PRPF40A
|
PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) |
| chr7_-_20826504 | 0.01 |
ENST00000418710.2
ENST00000361443.4 |
SP8
|
Sp8 transcription factor |
| chr9_-_130829588 | 0.01 |
ENST00000373078.4
|
NAIF1
|
nuclear apoptosis inducing factor 1 |
| chr3_-_45017609 | 0.01 |
ENST00000342790.4
ENST00000424952.2 ENST00000296127.3 ENST00000455235.1 |
ZDHHC3
|
zinc finger, DHHC-type containing 3 |
| chr14_+_23775971 | 0.01 |
ENST00000250405.5
|
BCL2L2
|
BCL2-like 2 |
| chr16_+_30935418 | 0.01 |
ENST00000338343.4
|
FBXL19
|
F-box and leucine-rich repeat protein 19 |
| chr14_+_23776024 | 0.01 |
ENST00000553781.1
ENST00000556100.1 ENST00000557236.1 ENST00000557579.1 |
BCL2L2-PABPN1
BCL2L2
|
BCL2L2-PABPN1 readthrough BCL2-like 2 |
| chr14_+_23790655 | 0.01 |
ENST00000397276.2
|
PABPN1
|
poly(A) binding protein, nuclear 1 |
| chr1_+_46972668 | 0.01 |
ENST00000371956.4
ENST00000360032.3 |
DMBX1
|
diencephalon/mesencephalon homeobox 1 |
| chr8_+_56014949 | 0.01 |
ENST00000327381.6
|
XKR4
|
XK, Kell blood group complex subunit-related family, member 4 |
| chr6_-_30524951 | 0.00 |
ENST00000376621.3
|
GNL1
|
guanine nucleotide binding protein-like 1 |
| chr17_+_55333876 | 0.00 |
ENST00000284073.2
|
MSI2
|
musashi RNA-binding protein 2 |
| chr9_-_101471479 | 0.00 |
ENST00000259455.2
|
GABBR2
|
gamma-aminobutyric acid (GABA) B receptor, 2 |
| chr14_-_23755297 | 0.00 |
ENST00000357460.5
|
HOMEZ
|
homeobox and leucine zipper encoding |
| chr15_+_90544532 | 0.00 |
ENST00000268154.4
|
ZNF710
|
zinc finger protein 710 |
| chr15_-_73661605 | 0.00 |
ENST00000261917.3
|
HCN4
|
hyperpolarization activated cyclic nucleotide-gated potassium channel 4 |
| chrX_-_53449593 | 0.00 |
ENST00000375340.6
ENST00000322213.4 |
SMC1A
|
structural maintenance of chromosomes 1A |
| chr2_-_169104651 | 0.00 |
ENST00000355999.4
|
STK39
|
serine threonine kinase 39 |
| chr22_-_44708731 | 0.00 |
ENST00000381176.4
|
KIAA1644
|
KIAA1644 |
| chr20_+_42875887 | 0.00 |
ENST00000342560.5
|
GDAP1L1
|
ganglioside induced differentiation associated protein 1-like 1 |
Network of associatons between targets according to the STRING database.
